View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17165_high_9 (Length: 272)

Name: NF17165_high_9
Description: NF17165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17165_high_9
NF17165_high_9
[»] chr7 (46 HSPs)
chr7 (9-272)||(46818338-46818601)
chr7 (33-208)||(6001937-6002112)
chr7 (33-208)||(31235778-31235953)
chr7 (35-272)||(35667151-35667390)
chr7 (39-208)||(32521913-32522081)
chr7 (33-272)||(22927789-22928031)
chr7 (48-272)||(42066981-42067206)
chr7 (33-272)||(20116499-20116740)
chr7 (33-272)||(26583630-26583867)
chr7 (37-208)||(1448816-1448986)
chr7 (85-208)||(17611093-17611216)
chr7 (36-272)||(42311199-42311438)
chr7 (33-208)||(35496161-35496336)
chr7 (33-272)||(14627798-14628040)
chr7 (33-208)||(46821930-46822106)
chr7 (48-272)||(35261229-35261455)
chr7 (33-208)||(23085437-23085612)
chr7 (33-208)||(1485243-1485417)
chr7 (33-272)||(26492281-26492523)
chr7 (48-272)||(48207833-48208058)
chr7 (33-179)||(23425387-23425532)
chr7 (58-272)||(6558817-6559035)
chr7 (48-208)||(23786508-23786666)
chr7 (33-208)||(42408278-42408453)
chr7 (33-269)||(46338969-46339209)
chr7 (33-272)||(45198952-45199192)
chr7 (56-208)||(17222986-17223136)
chr7 (124-208)||(32684675-32684759)
chr7 (33-127)||(36143782-36143875)
chr7 (135-208)||(34773729-34773802)
chr7 (145-208)||(2843227-2843290)
chr7 (33-208)||(433677-433853)
chr7 (126-272)||(19560007-19560156)
chr7 (85-272)||(20083301-20083496)
chr7 (33-208)||(21266308-21266481)
chr7 (135-195)||(24069425-24069485)
chr7 (53-187)||(17499666-17499799)
chr7 (53-187)||(17553415-17553548)
chr7 (85-195)||(969478-969588)
chr7 (89-199)||(3224437-3224547)
chr7 (51-105)||(43369855-43369908)
chr7 (33-90)||(2843332-2843388)
chr7 (33-102)||(3860868-3860935)
chr7 (36-89)||(32684604-32684656)
chr7 (149-201)||(3267237-3267289)
chr7 (149-201)||(9977231-9977283)
[»] chr1 (55 HSPs)
chr1 (33-272)||(18569230-18569471)
chr1 (33-272)||(39987310-39987550)
chr1 (33-272)||(25406203-25406445)
chr1 (33-272)||(28035059-28035301)
chr1 (34-272)||(34519054-34519290)
chr1 (85-200)||(39927548-39927663)
chr1 (33-272)||(38520454-38520694)
chr1 (33-208)||(9919309-9919484)
chr1 (33-208)||(51868631-51868806)
chr1 (33-208)||(5324544-5324718)
chr1 (33-208)||(51871784-51871958)
chr1 (48-271)||(3871344-3871569)
chr1 (96-272)||(9687124-9687302)
chr1 (33-269)||(5701177-5701418)
chr1 (33-216)||(27872659-27872841)
chr1 (33-208)||(11453854-11454030)
chr1 (33-269)||(19715817-19716058)
chr1 (83-208)||(48365751-48365876)
chr1 (48-272)||(7342657-7342884)
chr1 (33-208)||(50166085-50166260)
chr1 (52-269)||(31836745-31836965)
chr1 (33-208)||(7997707-7997884)
chr1 (48-199)||(44637357-44637507)
chr1 (33-272)||(14545440-14545679)
chr1 (33-208)||(35584604-35584782)
chr1 (33-208)||(40880999-40881174)
chr1 (48-272)||(41081623-41081849)
chr1 (35-208)||(9172410-9172585)
chr1 (35-208)||(9180392-9180567)
chr1 (33-208)||(45426052-45426223)
chr1 (33-202)||(7312097-7312259)
chr1 (35-272)||(33291337-33291577)
chr1 (33-270)||(50272061-50272301)
chr1 (33-208)||(20266222-20266397)
chr1 (33-208)||(30878995-30879170)
chr1 (135-208)||(50148392-50148465)
chr1 (35-162)||(19723256-19723382)
chr1 (33-208)||(30818337-30818506)
chr1 (96-199)||(47132865-47132968)
chr1 (124-199)||(12635160-12635235)
chr1 (96-195)||(16262823-16262922)
chr1 (143-202)||(40646700-40646759)
chr1 (111-208)||(33817167-33817263)
chr1 (111-208)||(33876637-33876733)
chr1 (145-272)||(45805747-45805877)
chr1 (124-183)||(29837635-29837694)
chr1 (78-158)||(32679163-32679242)
chr1 (124-201)||(14872633-14872706)
chr1 (124-199)||(49626904-49626978)
chr1 (33-90)||(25728064-25728120)
chr1 (124-200)||(799812-799888)
chr1 (133-213)||(5855922-5856002)
chr1 (149-201)||(27456555-27456607)
chr1 (35-114)||(30558736-30558813)
chr1 (135-199)||(41994428-41994492)
[»] chr4 (59 HSPs)
chr4 (33-272)||(35964895-35965136)
chr4 (36-208)||(18138899-18139071)
chr4 (36-208)||(49126112-49126284)
chr4 (33-272)||(51317914-51318155)
chr4 (37-272)||(46991050-46991287)
chr4 (48-219)||(2624441-2624611)
chr4 (36-272)||(25273811-25274053)
chr4 (33-208)||(10389740-10389914)
chr4 (33-272)||(4643786-4644028)
chr4 (33-272)||(9528796-9529039)
chr4 (33-272)||(10359467-10359707)
chr4 (69-272)||(27593748-27593952)
chr4 (50-199)||(35261137-35261285)
chr4 (48-208)||(12265398-12265557)
chr4 (33-208)||(38706696-38706871)
chr4 (48-269)||(53616572-53616797)
chr4 (33-203)||(56194527-56194699)
chr4 (48-269)||(29965577-29965802)
chr4 (33-272)||(31381591-31381832)
chr4 (48-208)||(868107-868265)
chr4 (48-208)||(3336142-3336302)
chr4 (33-194)||(21090081-21090241)
chr4 (33-208)||(43444321-43444496)
chr4 (33-208)||(8009347-8009520)
chr4 (33-208)||(34024424-34024597)
chr4 (36-272)||(43153933-43154179)
chr4 (33-269)||(50766434-50766670)
chr4 (48-208)||(9283854-9284014)
chr4 (48-272)||(52097835-52098065)
chr4 (124-208)||(47417681-47417765)
chr4 (33-198)||(9645545-9645710)
chr4 (35-221)||(20569182-20569371)
chr4 (85-208)||(6972790-6972913)
chr4 (33-208)||(2115574-2115749)
chr4 (33-272)||(37188514-37188753)
chr4 (114-208)||(49410232-49410326)
chr4 (33-272)||(32952670-32952907)
chr4 (33-272)||(14183731-14183972)
chr4 (39-272)||(44947343-44947582)
chr4 (39-208)||(1531841-1532011)
chr4 (124-196)||(43853449-43853521)
chr4 (97-198)||(18048863-18048964)
chr4 (53-187)||(1931723-1931856)
chr4 (111-272)||(45227960-45228124)
chr4 (96-199)||(6155253-6155355)
chr4 (85-195)||(36204415-36204526)
chr4 (135-199)||(28857420-28857484)
chr4 (124-199)||(22300856-22300931)
chr4 (124-199)||(52944318-52944393)
chr4 (126-195)||(2069611-2069680)
chr4 (86-199)||(51888238-51888351)
chr4 (124-199)||(52933970-52934046)
chr4 (33-100)||(1008223-1008289)
chr4 (124-199)||(9713919-9713994)
chr4 (124-199)||(22038829-22038904)
chr4 (135-198)||(36161729-36161792)
chr4 (137-199)||(21365091-21365153)
chr4 (98-199)||(9643369-9643470)
chr4 (35-90)||(23100617-23100673)
[»] chr8 (47 HSPs)
chr8 (48-272)||(33342375-33342599)
chr8 (33-219)||(16794216-16794401)
chr8 (33-208)||(28239756-28239931)
chr8 (36-272)||(43192266-43192503)
chr8 (33-272)||(35580381-35580621)
chr8 (48-208)||(11196828-11196986)
chr8 (48-200)||(15597161-15597312)
chr8 (48-272)||(39153062-39153291)
chr8 (33-208)||(44099920-44100093)
chr8 (33-272)||(33896004-33896247)
chr8 (32-216)||(11725604-11725786)
chr8 (67-272)||(15046850-15047057)
chr8 (48-269)||(19876150-19876372)
chr8 (33-208)||(2655792-2655968)
chr8 (33-206)||(9619345-9619519)
chr8 (48-269)||(27747036-27747258)
chr8 (48-272)||(33298794-33299019)
chr8 (48-208)||(4808902-4809062)
chr8 (36-272)||(32724400-32724647)
chr8 (48-208)||(9498585-9498748)
chr8 (33-208)||(9072640-9072816)
chr8 (33-272)||(14906842-14907085)
chr8 (35-272)||(34611729-34611969)
chr8 (85-269)||(11464146-11464333)
chr8 (33-208)||(42448013-42448189)
chr8 (85-208)||(29777194-29777317)
chr8 (33-269)||(43890046-43890286)
chr8 (135-208)||(23851480-23851553)
chr8 (33-203)||(44577959-44578129)
chr8 (35-198)||(37565875-37566038)
chr8 (92-199)||(5333386-5333493)
chr8 (137-208)||(17949262-17949333)
chr8 (135-198)||(15889581-15889644)
chr8 (85-199)||(8443536-8443650)
chr8 (124-197)||(29617301-29617374)
chr8 (79-195)||(24099284-24099400)
chr8 (35-199)||(36532823-36532986)
chr8 (139-199)||(8981167-8981227)
chr8 (149-201)||(14544926-14544978)
chr8 (133-197)||(21237788-21237852)
chr8 (96-201)||(3673405-3673507)
chr8 (96-199)||(7883266-7883366)
chr8 (96-197)||(14916214-14916315)
chr8 (150-199)||(27498389-27498438)
chr8 (135-199)||(1236722-1236785)
chr8 (135-199)||(1239422-1239485)
chr8 (124-200)||(3240369-3240445)
[»] chr6 (37 HSPs)
chr6 (33-194)||(34489164-34489327)
chr6 (36-202)||(23947310-23947475)
chr6 (33-272)||(16419074-16419316)
chr6 (33-201)||(33543615-33543780)
chr6 (48-203)||(25337501-25337656)
chr6 (33-208)||(25064151-25064327)
chr6 (48-208)||(12165772-12165930)
chr6 (33-272)||(8196326-8196568)
chr6 (33-272)||(35001506-35001748)
chr6 (33-200)||(8028112-8028279)
chr6 (33-272)||(4468475-4468716)
chr6 (33-272)||(17237205-17237445)
chr6 (48-203)||(4351987-4352146)
chr6 (33-272)||(12652856-12653102)
chr6 (33-208)||(33740564-33740739)
chr6 (79-272)||(4984486-4984682)
chr6 (48-198)||(28635117-28635268)
chr6 (50-272)||(4088393-4088618)
chr6 (33-269)||(7881024-7881264)
chr6 (33-269)||(8496881-8497122)
chr6 (114-272)||(33110608-33110769)
chr6 (33-272)||(10228595-10228837)
chr6 (33-208)||(7876030-7876206)
chr6 (135-199)||(26588499-26588563)
chr6 (124-195)||(31296808-31296879)
chr6 (33-108)||(33109750-33109824)
chr6 (87-199)||(7976204-7976316)
chr6 (135-199)||(34185720-34185784)
chr6 (96-199)||(30493492-30493595)
chr6 (96-203)||(31575530-31575637)
chr6 (84-181)||(1704163-1704260)
chr6 (33-70)||(8266551-8266588)
chr6 (124-157)||(30776656-30776689)
chr6 (149-201)||(11321494-11321546)
chr6 (149-201)||(24227757-24227809)
chr6 (149-201)||(30894613-30894665)
chr6 (224-272)||(34489332-34489379)
[»] chr3 (52 HSPs)
chr3 (33-272)||(46178490-46178723)
chr3 (34-269)||(37169145-37169381)
chr3 (33-272)||(46934556-46934797)
chr3 (33-208)||(22802935-22803110)
chr3 (33-272)||(25162350-25162591)
chr3 (33-272)||(25631445-25631688)
chr3 (96-272)||(31794047-31794225)
chr3 (85-272)||(36734612-36734801)
chr3 (35-272)||(29503378-29503616)
chr3 (33-208)||(35499184-35499362)
chr3 (35-272)||(39917317-39917555)
chr3 (33-208)||(36906035-36906210)
chr3 (48-208)||(49552210-49552369)
chr3 (48-208)||(32607396-32607557)
chr3 (111-272)||(42719508-42719672)
chr3 (33-208)||(44907385-44907560)
chr3 (53-208)||(30648705-30648860)
chr3 (37-272)||(17237720-17237960)
chr3 (135-272)||(25849825-25849964)
chr3 (135-208)||(12116113-12116186)
chr3 (33-208)||(4178478-4178653)
chr3 (111-208)||(3848905-3849002)
chr3 (111-208)||(21488082-21488179)
chr3 (33-208)||(38855022-38855198)
chr3 (85-199)||(51202249-51202363)
chr3 (33-208)||(38440567-38440738)
chr3 (33-160)||(4172480-4172607)
chr3 (97-198)||(4396362-4396463)
chr3 (139-208)||(14464529-14464598)
chr3 (48-149)||(47980708-47980809)
chr3 (48-149)||(47989995-47990096)
chr3 (48-149)||(47999282-47999383)
chr3 (48-149)||(48008569-48008670)
chr3 (33-208)||(50611404-50611578)
chr3 (33-156)||(2342405-2342528)
chr3 (124-195)||(12947305-12947376)
chr3 (89-195)||(46322356-46322460)
chr3 (140-199)||(52496929-52496988)
chr3 (87-199)||(29239292-29239404)
chr3 (135-199)||(35175401-35175465)
chr3 (96-199)||(29922015-29922118)
chr3 (96-199)||(29971168-29971271)
chr3 (149-203)||(20464993-20465047)
chr3 (137-195)||(44805029-44805087)
chr3 (96-201)||(1649378-1649482)
chr3 (33-90)||(3850560-3850616)
chr3 (35-176)||(54378816-54378956)
chr3 (147-199)||(4821816-4821868)
chr3 (172-208)||(6910695-6910731)
chr3 (48-76)||(16235323-16235351)
chr3 (149-201)||(33579891-33579943)
chr3 (149-201)||(45424809-45424861)
[»] chr2 (57 HSPs)
chr2 (35-272)||(8805789-8806028)
chr2 (35-272)||(9986261-9986504)
chr2 (35-272)||(17319246-17319482)
chr2 (37-272)||(2808391-2808627)
chr2 (36-208)||(22421659-22421830)
chr2 (33-208)||(7015697-7015871)
chr2 (48-271)||(3270149-3270374)
chr2 (36-203)||(459265-459432)
chr2 (33-208)||(34598908-34599082)
chr2 (33-208)||(39641844-39642020)
chr2 (33-208)||(20047068-20047243)
chr2 (33-208)||(27249137-27249312)
chr2 (33-272)||(6173552-6173794)
chr2 (33-272)||(4192759-4192999)
chr2 (33-208)||(30420597-30420773)
chr2 (33-269)||(36233925-36234167)
chr2 (33-208)||(41430948-41431123)
chr2 (33-208)||(3725101-3725275)
chr2 (33-200)||(26025404-26025570)
chr2 (48-272)||(32913177-32913402)
chr2 (35-219)||(8308097-8308276)
chr2 (51-272)||(8971547-8971769)
chr2 (55-271)||(3269031-3269251)
chr2 (55-271)||(3269590-3269810)
chr2 (48-272)||(27949358-27949588)
chr2 (48-208)||(40659918-40660077)
chr2 (33-208)||(45128124-45128299)
chr2 (86-221)||(9374529-9374664)
chr2 (97-203)||(31580580-31580686)
chr2 (67-272)||(25086991-25087199)
chr2 (110-272)||(37614045-37614209)
chr2 (33-191)||(32197798-32197955)
chr2 (32-156)||(40626066-40626189)
chr2 (33-208)||(21570394-21570569)
chr2 (85-187)||(4228105-4228207)
chr2 (85-195)||(24587680-24587790)
chr2 (96-198)||(29574657-29574759)
chr2 (33-208)||(27477075-27477243)
chr2 (147-272)||(84100-84227)
chr2 (111-177)||(12647970-12648036)
chr2 (96-199)||(4264444-4264544)
chr2 (135-208)||(32679096-32679169)
chr2 (48-178)||(10248083-10248211)
chr2 (96-200)||(43397146-43397247)
chr2 (124-197)||(28533984-28534057)
chr2 (33-102)||(31581812-31581880)
chr2 (33-131)||(32680644-32680743)
chr2 (135-195)||(18113891-18113951)
chr2 (35-198)||(18694970-18695139)
chr2 (36-131)||(41712828-41712923)
chr2 (85-208)||(38293521-38293644)
chr2 (137-199)||(23903416-23903478)
chr2 (85-195)||(37994237-37994347)
chr2 (87-195)||(10929624-10929733)
chr2 (134-199)||(41327510-41327575)
chr2 (164-208)||(17261588-17261631)
chr2 (53-105)||(36323799-36323850)
[»] chr5 (43 HSPs)
chr5 (33-272)||(15570828-15571067)
chr5 (33-272)||(2057757-2057999)
chr5 (36-236)||(42886401-42886600)
chr5 (36-208)||(7613044-7613214)
chr5 (35-272)||(27266778-27267019)
chr5 (33-208)||(30371643-30371819)
chr5 (33-272)||(19259731-19259974)
chr5 (36-208)||(27576336-27576507)
chr5 (33-272)||(21060202-21060442)
chr5 (48-194)||(30298142-30298287)
chr5 (35-272)||(16981211-16981450)
chr5 (33-272)||(18677384-18677627)
chr5 (33-272)||(20257615-20257855)
chr5 (48-272)||(35475257-35475482)
chr5 (33-198)||(36344487-36344650)
chr5 (33-208)||(7150321-7150496)
chr5 (79-272)||(41184359-41184555)
chr5 (33-208)||(19280931-19281105)
chr5 (85-208)||(34881688-34881811)
chr5 (36-208)||(43148652-43148824)
chr5 (33-183)||(11767726-11767878)
chr5 (33-208)||(26578168-26578345)
chr5 (33-203)||(7246877-7247047)
chr5 (33-208)||(43261805-43261978)
chr5 (48-194)||(27751860-27752005)
chr5 (33-199)||(28235504-28235669)
chr5 (33-272)||(781308-781548)
chr5 (36-199)||(3271397-3271566)
chr5 (33-203)||(7241701-7241871)
chr5 (35-272)||(42579801-42580048)
chr5 (135-272)||(4954012-4954152)
chr5 (32-272)||(7886857-7887099)
chr5 (135-198)||(10332576-10332639)
chr5 (124-186)||(10649653-10649715)
chr5 (135-181)||(31802484-31802530)
chr5 (51-181)||(19983368-19983499)
chr5 (153-272)||(22978843-22978964)
chr5 (48-114)||(35631771-35631836)
chr5 (145-199)||(35921023-35921077)
chr5 (33-90)||(10649372-10649428)
chr5 (175-208)||(11768062-11768095)
chr5 (48-104)||(28097086-28097142)
chr5 (111-201)||(13421909-13421996)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-208)||(453871-454023)
[»] scaffold0014 (1 HSPs)
scaffold0014 (33-208)||(201359-201532)
[»] scaffold0022 (1 HSPs)
scaffold0022 (85-271)||(83358-83544)
[»] scaffold0146 (1 HSPs)
scaffold0146 (37-272)||(16239-16479)
[»] scaffold0426 (1 HSPs)
scaffold0426 (111-208)||(6299-6396)
[»] scaffold0495 (1 HSPs)
scaffold0495 (33-272)||(5314-5556)
[»] scaffold0264 (1 HSPs)
scaffold0264 (51-188)||(20402-20537)
[»] scaffold0347 (1 HSPs)
scaffold0347 (124-195)||(6017-6088)
[»] scaffold0003 (1 HSPs)
scaffold0003 (48-186)||(361807-361942)
[»] scaffold0311 (2 HSPs)
scaffold0311 (33-121)||(8636-8723)
scaffold0311 (171-272)||(8745-8849)
[»] scaffold0136 (2 HSPs)
scaffold0136 (125-201)||(10067-10140)
scaffold0136 (147-199)||(34775-34827)
[»] scaffold0042 (1 HSPs)
scaffold0042 (96-199)||(92523-92626)
[»] scaffold0127 (1 HSPs)
scaffold0127 (96-199)||(15453-15554)
[»] scaffold0039 (1 HSPs)
scaffold0039 (85-200)||(93054-93170)
[»] scaffold0445 (1 HSPs)
scaffold0445 (149-200)||(1356-1407)
[»] scaffold0372 (1 HSPs)
scaffold0372 (137-199)||(9615-9677)
[»] scaffold0113 (1 HSPs)
scaffold0113 (84-198)||(36683-36797)


Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 272
Target Start/End: Complemental strand, 46818601 - 46818338
Alignment:
Q  9 gttgaaagaaacatggcgtacaagtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatc 108  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46818601 gttgaaagaaacatggtgtacaagtctttttctctctcgctcaatctaaataagtgatttttcacataaattttggttttttcttcatgatttcgtcatc 46818502  T
Q  109 cgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46818501 cgagtgtggcggtgcgttgttcgaaatcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatattaaaagatcgattgttca 46818402  T
Q  209 gttaaagaatttgcgcaacgttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    || |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  46818401 gtcaaagaattggcgcaacgttgcagatccagagtcatgtgtattccgttcactttaattttat 46818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 6001937 - 6002112
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||||| |||||||| |||  ||||||||     
T  6001937 tctttttctccctattttaatctaaataagtgatttttcacatagatttaggttttctctacgtgatttcgtcatctgagtgtggcggtttgttgttcgt 6002036  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||||||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||| ||| ||||    
T  6002037 cgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaagatcaattattca 6002112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 31235953 - 31235778
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| | |||||| ||| | |||||||||||||  ||||||| |||  ||||||||     
T  31235953 tctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgatttcgtcatctaagtgtggcggtttgttgttcgt 31235854  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||| ||||    
T  31235853 cgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattca 31235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 35667390 - 35667151
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |     
T  35667390 tttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcg 35667292  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgc 232  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||| ||||||||||||||||||||| |||| | || || ||  ||| ||| |||||    
T  35667291 tcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgagcgtcaatgttgc 35667192  T
Q  233 agattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| || | ||||  |||||||||||||||||||||||    
T  35667191 agattcggaggccatggatattccggtcactttaattttat 35667151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 32522081 - 32521913
Alignment:
Q  39 tctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatctt 138  Q
    |||||||  |||||| ||||||||||||||| |||||||||||  ||||||||||| | |||||| |||| ||||||||| ||| |||||||| ||||||    
T  32522081 tctctctatttcaatttaaataagtgatttt-cacatagatttatgttttttcttcgttatttcgccatctgagtgtggttgtgtgttgttcgtcatctt 32521983  T
Q  139 gtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||| ||| ||||    
T  32521982 gtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaattattca 32521913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 22928031 - 22927789
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg-gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  ||||||||||||||||||  ||||||| |||| | |  |||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  22928031 tctttttctctctatttcaatctaaataagtga-ctttcacacagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 22927933  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgt 229  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| |||| | ||||| || | || ||||||    
T  22927932 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgt 22927833  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || | ||||  ||||||||| |||||||||||||    
T  22927832 tgcagatccggaggccatggatattccggtgactttaattttat 22927789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 42067206 - 42066981
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||| ||||  |||||||| | ||||||||||||     
T  42067206 ttcaatctaaataagtgatttt-cacatagatatagattttttctttctgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgc 42067108  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcag-agtc 244  Q
    ||||||||||| ||| || ||||||||||||||| |||||||||| |||||||||| |||| | ||||| ||  ||| ||||||||||||| | | || |    
T  42067107 tgtttgatttctcgtcttcttgcggtgttcatttgattcatattg-aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaagcc 42067009  T
Q  245 atgtgtattccggtcactttaattttat 272  Q
    |||  |||||||||||||||||||||||    
T  42067008 atgaatattccggtcactttaattttat 42066981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 20116499 - 20116740
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| ||||     |||||| ||  ||||||||     
T  20116499 tctttttctatctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatatacatgtggttgtttgttgttcgt 20116597  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 229  Q
    | ||||||||| ||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||| |||| | ||| | |||| |   ||||||    
T  20116598 cgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaa-actttgggcgtcaacgt 20116696  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||  |||| |||||   |||||||||||||||||||||||    
T  20116697 tgcagacccagaggtcatagatattccggtcactttaattttat 20116740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 26583630 - 26583867
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||| |||||  |||||||||||||||||||||| || ||| || | |||||||| |||  ||||||| |||||  |||||||||||  |||||||     
T  26583630 tctttttatctctatttcaatctaaataagtgatttt-catatatatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttca 26583728  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacgtt 230  Q
     | ||||||||||||||||||||||||| || ||  |||  ||||||||| ||||||||||||||||||||| |||| | |||||    ||| |||||||    
T  26583729 tcgtcttgtgcggcgttgtttgatttccagtcttcgtgcaatgttcatttgattcatattgaaagatcgattattcaatcaaaga----gcgtcaacgtt 26583824  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| || ||||||  |||||||||||||||||||||||    
T  26583825 gcagattcggaggtcatgaatattccggtcactttaattttat 26583867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 1448986 - 1448816
Alignment:
Q  37 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatc 136  Q
    |||||||||  |||||||||||||||||||||| ||||||||| | | |||||| ||  ||||||| |||||  |||||||| ||  |||||||| | |     
T  1448986 tttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttatttgtgatttcatcatctaagtgtggttgtttgttgttcgtcgta 1448888  T
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||| ||| ||||    
T  1448887 ttgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatccattattca 1448816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 17611093 - 17611216
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||| ||||||||||||||||||||||||||| ||| |||| | |||||||||| |||||||||||| | || ||||||| |||||||||| ||    
T  17611093 ttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgat 17611192  T
Q  185 tcatattgaaagatcgattgttca 208  Q
    |||||||||||||| |||| ||||    
T  17611193 tcatattgaaagattgattattca 17611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 272
Target Start/End: Original strand, 42311199 - 42311438
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||||||  ||||||||||||||||||| || ||||||||| | |||||||| |||  ||||||| ||||   ||||||| |||  |||||||| |     
T  42311199 ttttctctctatttcaatctaaataagtgatatt-cacatagatctaggtttttttctttgtgatttcatcatttaagtgtggcggtttgttgttcgtcg 42311297  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gcaacgttgc 232  Q
    |||| ||| |||||||||||||| |||| ||  |||| ||||||||| ||||||||||||||||||||| |||| | ||||| || ||   |||||||||    
T  42311298 tcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgc 42311397  T
Q  233 agattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||| | || ||||||  |||||||||||||||||||||||    
T  42311398 agatccggaggtcatggatattccggtcactttaattttat 42311438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 35496336 - 35496161
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||| ||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  |||||||     
T  35496336 tctttttctctctatttcaatctaattaagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttca 35496238  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||||||||||||||| |||||||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  35496237 tcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 35496161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 14628040 - 14627798
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||| |||||  |||||||||||||||||||||| |||||| || | |||||||| | |  ||||||| |||||  |||||||||||  ||||||||    
T  14628040 tctttttttctctaattcaatctaaataagtgatttt-cacataaatataggtttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcg 14627942  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
     | | |||||||||||||||||||||| ||| ||  | ||||||| |||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||    
T  14627941 tcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgt 14627842  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||||| || | ||||  |||||| ||||||||||||||||    
T  14627841 tgcagattcggaggccatgaatattccagtcactttaattttat 14627798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 46821930 - 46822106
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | ||||||  |||  | ||||| |||||  ||| ||||| |  |||||||    
T  46821930 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttc 46822028  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||||||||    
T  46822029 gtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttca 46822106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 35261229 - 35261455
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 145  Q
    ||||||| |||||||||||||| |||||| |||| | ||||||  |||| |||||||||||||| |||||||| ||| |||||||| | |||  ||| ||    
T  35261229 ttcaatccaaataagtgatttt-cacataaatttagattttttttcttcgtgatttcgtcatccaagtgtggttgtgtgttgttcgtcgtctcctgcagc 35261327  T
Q  146 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcagagt 243  Q
     || |||||||| |||| ||  |||| ||||||||| ||||||||| ||||||||||| |||| | ||||| || | || ||| ||||||||| | |||     
T  35261328 attatttgattttccgtctttgtgcg-tgttcatttgattcatattaaaagatcgattattcaatcaaagatttagacgtcaatgttgcagatccggagg 35261426  T
Q  244 catgtgtattccggtcactttaattttat 272  Q
    |||||||||||||||||||||||||||||    
T  35261427 catgtgtattccggtcactttaattttat 35261455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 23085437 - 23085612
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||| |||  |||||||||||||| ||| ||| ||||||||| | |||||||| |||  ||||||  |||||  |||||||||||  ||||||||    
T  23085437 tctttttctttctatttcaatctaaataattgacttt-cacatagatctaggtttttttctttgtgattttatcatctaagtgtggtggtttgttgttcg 23085535  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | || |||||||| ||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  23085536 tcgtcatgtgcggcattgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaagatcgattattca 23085612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 1485417 - 1485243
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | | |||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  1485417 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 1485319  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||| |||||||||| |||||| | || ||||||| ||||||| ||||  ||||||| ||||||| ||||    
T  1485318 cgtcttgtgcagcgttgtttgttttcccatcttcttgcggtattcattttattccaattgaaaaatcgattattca 1485243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 26492281 - 26492523
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| | | |||||| |||  ||||||| |||||  |||||||||||  ||||| ||    
T  26492281 tctttttctctctatttcaatttaaataagtgatttt-cacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtccg 26492379  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
     | |||||||| ||||||||||||||||||| ||   ||| ||||||||| |||||||||||||| |||||| |||| | ||||| ||  ||| ||||||    
T  26492380 ccgtcttgtgctgcgttgtttgatttcccgtcttcgcgcgatgttcatttgattcatattgaaaggtcgattattcaatcaaagatttgggcgtcaacgt 26492479  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || | | ||  |||||||||||||||||||||||    
T  26492480 tgcagatccggatgccttggatattccggtcactttaattttat 26492523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 48207833 - 48208058
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||  ||||||| |||||  ||||||||| |  |||||||| | |||||||| |||     
T  48207833 ttcaatctaaataagtgatttt-cacatagatctatgttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgctgcgc 48207931  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtc 244  Q
    ||||||||||||||| || ||||||||||||||| |||||| ||| |||||| ||| | || | ||||| ||  ||| ||||||||||||| | || | |    
T  48207932 tgtttgatttcccgtcttcttgcggtgttcatttgattcattttg-aagatccattatacaatcaaagatttgggcgtcaacgttgcagatccggaggcc 48208030  T
Q  245 atgtgtattccggtcactttaattttat 272  Q
    |||  |||||||||||||||||||||||    
T  48208031 atggatattccggtcactttaattttat 48208058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 23425532 - 23425387
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  ||||||||||||||||||||||| |||||||| | |||||||||||  ||||||| ||||   |||||||||||  ||||||||     
T  23425532 tctttttctctatatttcaatctaaataagtgattttt-acatagatctaggttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgt 23425434  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcat 179  Q
    | |||||||||| | ||||||||||||||| || |||||||||||||    
T  23425433 cgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttcat 23425387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 272
Target Start/End: Original strand, 6558817 - 6559035
Alignment:
Q  58 ataagtgatttttcacatagattttggttttt--tcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgat 155  Q
    |||||||||||| ||||||||||| |||||||  ||||  ||||||| |||||  |||||||||||  |||||||| | |||||| || ||||||| |||    
T  6558817 ataagtgatttt-cacatagatttaggtttttcttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgat 6558915  T
Q  156 ttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtcatgtgtat 252  Q
    ||||||| ||  |||||||||||||| |||||| |||||| ||||||| |||| | ||||| ||  ||| ||||||||||||| | || | ||||  |||    
T  6558916 ttcccgtcttcgtgcggtgttcatttgattcattttgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatat 6559015  T
Q  253 tccggtcactttaattttat 272  Q
    ||||||||||||||||||||    
T  6559016 tccggtcactttaattttat 6559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 23786508 - 23786666
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| |||| | || |   |||||||||  ||||| | |||||  |||||||||||  |||||||| | |||| ||||||||    
T  23786508 ttcaatctaaataagtgatttt-cacacatatctaaattttttctttgtgatt-catcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgt 23786605  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||| ||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  23786606 tgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatcgattattca 23786666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 42408278 - 42408453
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||| || |||||||||| ||| | |||||||| |||  ||||||| ||||   |||||||||||  ||||||||    
T  42408278 tctttttctctttatttcaatctaaataattg-tttttcacatggatctaggtttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcg 42408376  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||||| |||||||||||||| |||| ||  |||||| ||||||| ||||||||||||||||||||| ||||    
T  42408377 tcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattgaaagatcgattattca 42408453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 269
Target Start/End: Original strand, 46338969 - 46339209
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||| | | ||||||  |||  | ||||| ||||   ||||||||| |  |||||||    
T  46338969 tctttttctctttatttcaatgtaaataagtgatttt-cacatagatctagcttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttc 46339067  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
    | | ||||||||||||||||||||||| |||| ||  | |||||||||||| ||||||||||||||||| |||||||| | ||||| ||  ||| |||||    
T  46339068 gtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgggcgtcaacg 46339167  T
Q  229 ttgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    ||||||||||  || | |||  ||||||||||||||||||||    
T  46339168 ttgcagattcgaaggcaatggatattccggtcactttaattt 46339209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 45199192 - 45198952
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  || ||| ||||||||||||||| || |||||| |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  45199192 tctttttctctatattttaatttaaataagtgatttt-catatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 45199094  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | | |||||||||| ||||||||||||||| || ||||||||||||| | |||||| ||| ||||||| || |||| | ||||| ||  ||| |||||||    
T  45199093 cgttttgtgcggcgctgtttgatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcggttattcaatcaaagatttgggcgtcaacgtt 45198995  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | || | ||||  ||||||||||||||| |||||||    
T  45198994 gcagatccggaggccatggatattccggtcactttgattttat 45198952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 208
Target Start/End: Complemental strand, 17223136 - 17222986
Alignment:
Q  56 aaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgat 155  Q
    |||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  ||||||||| |  |||||||  | ||||||||||||| |||||||    
T  17223136 aaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgat 17223038  T
Q  156 ttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    || || | ||  ||| |||||||||| ||||||||||||||||||||| ||||    
T  17223037 tttccttcttcatgc-gtgttcatttgattcatattgaaagatcgattattca 17222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 32684675 - 32684759
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  32684675 gttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaatatcgattattca 32684759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 36143782 - 36143875
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg 127  Q
    |||||||||||||  ||||||||||||||||| |||||||| ||||| | |||||||||||| |||||||||| || ||||||||||||| ||||    
T  36143782 tctttttctctctaattcaatctaaataagtg-tttttcacgtagatctaggttttttcttcgtgatttcgtcgtctgagtgtggtggtgtgttg 36143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 34773729 - 34773802
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||| |||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||| |||||    
T  34773729 tcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatcgatcgttca 34773802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 2843290 - 2843227
Alignment:
Q  145 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  2843290 cgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 2843227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 433853 - 433677
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtgg-tggtgcgttgttc 130  Q
    |||||||||||||  |||||||||||||| ||| ||| ||||||||| | | |||||| |||  ||||||| |||||  ||||||| ||||  |||||||    
T  433853 tctttttctctctatttcaatctaaataaatgacttt-cacatagatctagatttttttctttgtgatttcatcatctaagtgtgggtggtttgttgttc 433755  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |   |||||||| |||||||||| |||| ||| || || | |||||||||| |||| |||||||||||||||| ||||    
T  433754 gttgtcttgtgcagcgttgtttgctttctcgtcttcttacagtgttcattttattcctattgaaagatcgattattca 433677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 272
Target Start/End: Original strand, 19560007 - 19560156
Alignment:
Q  126 tgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg- 223  Q
    |||||| | |||||||||||||||||||||||| | | || |||  |||||||||| |||||||||||||||| |||| |||| | ||||| || | ||     
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagattgattattcaatcaaagatttggacgt 19560106  T
Q  224 caacgttgcagattcagag-tcatgtgtattccggtcactttaattttat 272  Q
    |||| |||||||| | |||  ||||  |||||||||||||||||||||||    
T  19560107 caaccttgcagatccggagaccatgaatattccggtcactttaattttat 19560156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 272
Target Start/End: Original strand, 20083301 - 20083496
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg-----ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcat 179  Q
    ||||||||||||||||||| ||||  |||||| ||||| ||||     || | | ||||||| | |||||||||||||||||| |||||||||||||||     
T  20083301 ttttttcttcatgatttcgacatctaagtgtgatggtgtgttggttaatttgtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttcag 20083400  T
Q  180 ttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagtcatgt--gtattccggtcactttaattttat 272  Q
    ||  || || |||||||||||||| |||| | ||||| ||  ||| |||||||||| || | ||| |||||  ||||||||||||||||| ||||||    
T  20083401 ttgttttattttgaaagatcgatt-ttcaatcaaagatttgggcgtcaacgttgcatatccggagacatgtgagtattccggtcactttagttttat 20083496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 21266308 - 21266481
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||  |||||||  ||||||| |||||  |||||||||||  ||| ||||     
T  21266308 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctagg-gttttctttttgatttcatcatctaagtgtggtggtttgttattcgt 21266405  T
Q  133 catcttgtgcggc-gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||||| |  || ||| |||| |||| || ||||||||||||| | |||||||||| |||||||||| ||||    
T  21266406 cgtcttgtgcgacatttttttaattttccgtcttcttgcggtgttcatctgattcatattg-aagatcgattattca 21266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 24069485 - 24069425
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||||||| ||||||||  |||||||||||||||||| ||| |||||||||||||    
T  24069485 tcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaa 24069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 187
Target Start/End: Complemental strand, 17499799 - 17499666
Alignment:
Q  53 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 152  Q
    ||||||||||| ||||| |||| |||| | ||||||||| |  ||||||| |||||  ||||| ||||||  ||||||  | ||||||||| | ||||||    
T  17499799 tctaaataagttatttt-cacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgttt 17499701  T
Q  153 gatttcccgtattgttgcggtgttcatttaattca 187  Q
    ||||| |||| |||||||||| ||||||| |||||    
T  17499700 gattttccgtcttgttgcggtattcatttgattca 17499666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 187
Target Start/End: Original strand, 17553415 - 17553548
Alignment:
Q  53 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 152  Q
    ||||||||||| ||||| |||| |||| | ||||||||| |  ||||||| |||||  ||||| ||||||  ||||||  | ||||||||| | ||||||    
T  17553415 tctaaataagttatttt-cacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgttt 17553513  T
Q  153 gatttcccgtattgttgcggtgttcatttaattca 187  Q
    ||||| |||| |||||||||| ||||||| |||||    
T  17553514 gattttccgtcttgttgcggtattcatttgattca 17553548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 969588 - 969478
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||| ||||||| || |  || ||||| | || |||||||| | |||| ||||||||||||||||||  ||| || ||||||||||  |||  |    
T  969588 ttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggt 969489  T
Q  185 tcatattgaaa 195  Q
    |||||||||||    
T  969488 tcatattgaaa 969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 3224547 - 3224437
Alignment:
Q  89 ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcat 188  Q
    ||||||||||||||||| || ||| |  ||| || ||||||||   ||||||||| | || ||||||||| ||| |||||||| ||||| |||  |||||    
T  3224547 ttcttcatgatttcgtcgtctgagggctgtgttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcat 3224448  T
Q  189 attgaaagatc 199  Q
    |||||| ||||    
T  3224447 attgaaggatc 3224437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 43369908 - 43369855
Alignment:
Q  51 aatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtc 105  Q
    ||||||||||||||||||| ||||||||| |  ||||||||||| ||||||||||    
T  43369908 aatctaaataagtgatttt-cacatagatataagttttttcttcgtgatttcgtc 43369855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 2843388 - 2843332
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 90  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||    
T  2843388 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 2843332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 3860868 - 3860935
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttc 102  Q
    ||||||||||| |  |||||| ||||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  3860868 tctttttctctttgtttcaatataaataagtga-ttttcacatagatcttgg-tttttcttcgtgatttc 3860935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 32684604 - 32684656
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttt 89  Q
    ||||||||||  |||||||||||||||||| ||||||||||||| | |||||||    
T  32684604 ttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttt 32684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 3267289 - 3267237
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| ||| || |  |||||||| |||||||||||||||||||||||    
T  3267289 gtttgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcga 3267237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 9977283 - 9977231
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| ||| |||| |||||| ||||||| ||| ||||||||||||||    
T  9977283 gtttgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaagatcga 9977231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 18569471 - 18569230
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttt-ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||| |||||| ||||||||||||  ||||||||||||| ||||||||    
T  18569471 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcg 18569373  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacg 228  Q
     |||||||| ||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||| |   |||||    
T  18569372 tcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcatttaattcatattgaaagatcgattattcaattgaag-atttgggtgtcaacg 18569274  T
Q  229 ttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  18569273 ttgcagatccagaggcatgggtattccggtcactttaattttat 18569230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 39987310 - 39987550
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||| | | |||||||||| |||||||  ||||||||||||||||||  |||||||     
T  39987310 tctttttctctctgattcaatctaaataagtgatttttcatatagatctag-ttttttcttcgtgatttcaccatccgagtgtggtggtgtattgttcgt 39987408  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| |||| | ||||||||  ||| |||||||    
T  39987409 cgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagaattgggcgtcaacgtt 39987508  T
Q  231 gcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | ||| |||| ||||||||||||||||||||||||    
T  39987509 gcagatccggaggcatgggtattccggtcactttaattttat 39987550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 25406445 - 25406203
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  |||||||||||||  |||||||||||   |||||||    
T  25406445 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcgtcatctaagtgtggtggtttattgttcg 25406347  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgt 229  Q
     | ||||||| ||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| |||| | ||||| || | || ||||||    
T  25406346 tcgtcttgtgtggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttcgacgtcaacgt 25406247  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| |||| ||||||  ||||||||| |||||||||||||    
T  25406246 tgcagatccagaggtcatggatattccggtgactttaattttat 25406203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 28035059 - 28035301
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  28035059 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 28035157  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
     | |||||||||||||||||||||||||||| ||  | |||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| |||| |    
T  28035158 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacat 28035257  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || | ||||  |||||||||||||||||||||||    
T  28035258 tgcagatccggaggccatgaatattccggtcactttaattttat 28035301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 34 - 272
Target Start/End: Original strand, 34519054 - 34519290
Alignment:
Q  34 ctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |    
T  34519054 ctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtc 34519152  T
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcgcaacgttgca 233  Q
     | |||||||||||||||||||||| ||| || ||| ||||||||||| ||||||||||||||||||||| |||| | || | ||||| |  ||||||||    
T  34519153 gttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaatcaacg-atttg-gacacgttgca 34519250  T
Q  234 gattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||| | || | ||||  |||||||||||||||||||||||    
T  34519251 gatccggaggccatggatattccggtcactttaattttat 34519290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 39927663 - 39927548
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||  |    
T  39927663 ttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtt 39927564  T
Q  185 tcatattgaaagatcg 200  Q
    ||||||||||||||||    
T  39927563 tcatattgaaagatcg 39927548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 38520694 - 38520454
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  ||| |||||||||||||||||| ||||||||| |  ||||||||||| ||||||| |||||  || ||||||||  ||||||||     
T  38520694 tctttttctctctatttcgatctaaataagtgatttt-cacatagatctatgttttttcttcgtgatttcatcatctaagagtggtggtttgttgttcgt 38520596  T
Q  133 catc---ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacg 228  Q
    | ||   ||||| ||||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||| || | | ||  | | |||| |||||    
T  38520595 cgtcgtcttgtgtggcgttgtttgatttcccgtattcttacggtgttcatctgattcatattgaaagatcgattattaaatcaa--attgtgcgtcaacg 38520498  T
Q  229 ttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||||||||| ||| ||||  |||||| ||||||||||||||||    
T  38520497 ttgcagattcggaggcatggatattccagtcactttaattttat 38520454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 9919309 - 9919484
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||| | || |||||||||  |||||||  ||||  |||||||||||  ||||||||    
T  9919309 tctttttctctctatttcaatctaaataagtgattttt-acatagatctatgtttttttctttgtgatttcaccatctaagtgtggtggtttgttgttcg 9919407  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||| |||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9919408 tcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 9919484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 51868806 - 51868631
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  51868806 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 51868708  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||| |||| ||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  51868707 tcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatcgattattca 51868631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 5324718 - 5324544
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||||||| ||| || ||||  |||||| |||  ||||||| |||||  |||||||||||  ||||||||     
T  5324718 tctttttctctctatttcaatctaaataagtgatttt-cacgtaaatttaagtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgc 5324620  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||||||  |||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||| ||||    
T  5324619 cgtcttgtgcggtattgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaaaatcgattattca 5324544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 51871784 - 51871958
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | | |||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  51871784 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctagcttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 51871882  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||||| ||||||||| ||| |||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  51871883 cgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaaagatcgattattca 51871958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 271
Target Start/End: Original strand, 3871344 - 3871569
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||| ||||    
T  3871344 ttcaatctaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgt 3871442  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcata-ttgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcaga-g 242  Q
    ||||||||||||||| || ||||||||||| ||| ||| ||| |||||||||||||| |||| | |||| ||||| |   ||||||||||||| |||| |    
T  3871443 tgtttgatttcccgtcttcttgcggtgttc-tttgatttatatttgaaagatcgattattcaatcaaag-atttgggtgtcaacgttgcagatccagagg 3871540  T
Q  243 tcatgtgtattccggtcactttaatttta 271  Q
    |||||| |||| |||||||| ||||||||    
T  3871541 tcatgtatatttcggtcactataatttta 3871569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 272
Target Start/End: Complemental strand, 9687302 - 9687124
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    ||||||| |||||  |||||||||||  |||||||| |||||||||||||||||||||||||||| | || ||||||||||||||| |||||||||||||    
T  9687302 tgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaa 9687203  T
Q  196 gatcgattgttcagttaaagaatt-tgcgcaacgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| |||| | ||||| ||  |||  | ||||||||| |||| | ||||  |||||||||||||||||||||||    
T  9687202 gatcgattattcaatcaaagatttgggcgtcaagttgcagatccagaggccatgaatattccggtcactttaattttat 9687124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 269
Target Start/End: Original strand, 5701177 - 5701418
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 129  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||| | |||||||| ||| |    ||||| |||||  ||||||||| |  ||||||    
T  5701177 tctttttctctttatttcaatttaaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtt 5701275  T
Q  130 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caa 226  Q
    || | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||| |||||||||||| | |||| ||||| |   |||    
T  5701276 cgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaatatcgattgttcaatcaaag-atttgggcatcaa 5701374  T
Q  227 cgttgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    |||||||||| | ||| | |||  ||||||||||||||||||||    
T  5701375 cgttgcagatccggagacaatggatattccggtcactttaattt 5701418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 216
Target Start/End: Original strand, 27872659 - 27872841
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||||| |  ||||||||||| ||||| | |||||  |||||||||||  ||||||||     
T  27872659 tctttttcgctctatttcaatctaaataagtgatttt-cacatagatctaagttttttcttcgtgattgcatcatctaagtgtggtggtttgttgttcgt 27872757  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaaga 216  Q
    | |||||| || |||||||||||||   || || ||||||||||||||||||||| |||||| |||||||| |||| |||||||    
T  27872758 cgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttcatttaattcaaattgaaggatcgattattcaattaaaga 27872841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 11453854 - 11454030
Alignment:
Q  33 tctttttctctctcg--ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||||||   ||||||||||||||||| |||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||    
T  11453854 tctttttctctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 11453952  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | |||||||| ||| ||||||||||||||| || ||||||| ||||||| |||||| |||||||| ||||| ||||    
T  11453953 gtcgtcttgtgcagcgctgtttgatttcccgtctttttgcggtattcatttgattcatcttgaaagagcgattattca 11454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 269
Target Start/End: Complemental strand, 19716058 - 19715817
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttctt-catg---atttcgtcatccgagtgtggtggtgcgttgt 128  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| |||||||| || |||    ||||| |||||  ||||||||| |  |||||    
T  19716058 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttaggttttttttttcattgtaatttcatcatctaagtgtggtgatt-gttgt 19715961  T
Q  129 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caa 226  Q
    ||| | |||||||| ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||| | | ||||| ||  ||| |||    
T  19715960 tcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggcgtcaa 19715861  T
Q  227 cgttgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    ||||||||||  |||| | |||  ||||||||||||||||||||    
T  19715860 cgttgcagatctagaggcaatggatattccggtcactttaattt 19715817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 48365876 - 48365751
Alignment:
Q  83 ggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcattta 182  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||  |||||||||||||   || |||| |||||||||||||     
T  48365876 ggttttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttg 48365777  T
Q  183 attcatattgaaagatcgattgttca 208  Q
    |||||||||||| |||||||| ||||    
T  48365776 attcatattgaaggatcgattattca 48365751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 7342657 - 7342884
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 146  Q
    |||||||||||||||||| |||| || ||||| | || |||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||||||    
T  7342657 ttcaatctaaataagtgactttt-acgtagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 7342755  T
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcagag-t 243  Q
    ||||||| |||||||| || ||||| ||||||||| |||| |||||||||||||||| |||| | ||||| || | || ||||||||||||| | |||      
T  7342756 ttgtttgttttcccgtcttcttgcgttgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggagac 7342855  T
Q  244 catgtgtattccggtcactttaattttat 272  Q
    ||||  ||||||||| |||||||||||||    
T  7342856 catggatattccggtgactttaattttat 7342884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 50166260 - 50166085
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||| |||  |||||||||||||||||| ||| ||||||||||| |||||||| ||   ||||||| |||||  |||||||||||  ||||||||    
T  50166260 tctttttctatctatttcaatctaaataagtgaattt-cacatagatttaggtttttttctatgtgatttcatcatctaagtgtggtggtttgttgttcg 50166162  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||||||||||| |||| |||| ||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  50166161 tcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 50166085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 52 - 269
Target Start/End: Original strand, 31836745 - 31836965
Alignment:
Q  52 atctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttg 149  Q
    |||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | |||||||||| ||||    
T  31836745 atctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttg 31836843  T
Q  150 tttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagtcatg 247  Q
    ||||||||||||| ||  |||||||||||||| ||||||||||||| |||||||||||| | ||||| ||  ||| ||||||||||||  | |||  |||    
T  31836844 tttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaatcgattgttcaatcaaagatttgagcgtcaacgttgcagaaccggagcaatg 31836943  T
Q  248 tgtattccggtcactttaattt 269  Q
      ||||||||||||||||||||    
T  31836944 gatattccggtcactttaattt 31836965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 7997707 - 7997884
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 129  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||| | |||||||| ||| |    ||||| |||||  ||||||||| |  ||||||    
T  7997707 tctttttctctttatttcaatataaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtt 7997805  T
Q  130 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    || | |||||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||||||| ||||||||||||    
T  7997806 cgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaatatcgattgttca 7997884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 44637357 - 44637507
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||| ||||| |  |||| |||||  |||||||||||||  | ||||||| || ||||||||   ||||||||| |||    
T  44637357 ttcaatctaaataagtgatttt-cacgtagatctaagtttcttctttgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgt 44637455  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||| |||||||| ||||| |||||||||||| |||||||||||||||||    
T  44637456 tgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatc 44637507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 14545440 - 14545679
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  14545440 tctttttctctatatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 14545538  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | ||||||||| || ||||||| ||||||| || ||||||||||||| | ||| || ||| |||||||||| |||| | ||||| ||  ||| |||||||    
T  14545539 cgtcttgtgcgacgctgtttga-ttcccgtcttcttgcggtgttcatctgatttattttg-aagatcgattattcaatcaaagatttgggcgtcaacgtt 14545636  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | || | |||| |||||||| ||| |||||||||||    
T  14545637 gcagatccggaggccatgagtattccgatcattttaattttat 14545679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 35584782 - 35584604
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgt 128  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||    |||  | ||||  | |||  ||||||||| |  |||||    
T  35584782 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtaattttataatctaagtgtggtgatttgttgt 35584684  T
Q  129 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  35584683 tcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 35584604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 40881174 - 40880999
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatga--tttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  |||||||||||| ||||||||| ||| ||||| | |||||||| ||  |||  |||| |||||  |||||||||||  |||||||    
T  40881174 tctttttctctctatttcaatctaaatgagtgatttt-cacttagatctaggttttttttttttgagatttcatcatctaagtgtggtggtttgttgttc 40881076  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||| ||||||| ||||    
T  40881075 gtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatatt-aaaaatcgattattca 40880999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 41081849 - 41081623
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    ||||||||| |||||||||||  | ||||||| | ||||||||| || ||| ||||||||||||||||||||||| |||||||  |  ||||||||||||    
T  41081849 ttcaatctatataagtgatttg-cgcatagatctaggttttttcatcgtgacttcgtcatccgagtgtggtggtgtgttgttcatcggcttgtgcggcgt 41081751  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattg-aaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcagagt 243  Q
    ||||| |||||  |  ||||||| |||||||| | |||||||||| ||||||||||| |||| | ||| ||| || |   ||| ||||||||| | |||     
T  41081750 tgtttaatttcatgccttgttgcagtgttcatatgattcatattgaaaagatcgattattcaatcaaa-aatctgagcatcaatgttgcagatccggagg 41081652  T
Q  244 catgtgtattccggtcactttaattttat 272  Q
    ||||||||||| ||||| |||||||||||    
T  41081651 catgtgtattctggtcattttaattttat 41081623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 9172410 - 9172585
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatg--atttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||| |||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||  ||||  |||||  |||||||||||  ||||||||    
T  9172410 tttttttctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcg 9172508  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9172509 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 9172585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 9180392 - 9180567
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatg--atttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||| |||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||  ||||  |||||  |||||||||||  ||||||||    
T  9180392 tttttttctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcg 9180490  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9180491 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 9180567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 45426223 - 45426052
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  || ||||||||||||||||||| ||||||||| |  |||||||  |   |||||| |||||  |||||||||||  ||||||||     
T  45426223 tctttttctctctatttaaatctaaataagtgatttt-cacatagatctaagtttttttgt---gatttcatcatctaagtgtggtggtttgttgttcgt 45426128  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||||||||||||||||||||| |  |  |||||||||||||| |||||||| |||||||||||| ||||    
T  45426127 cgtcttgtgcggcgttgtttgatttcccatcatcgtgcggtgttcatttgattcatatcgaaagatcgattattca 45426052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 202
Target Start/End: Complemental strand, 7312259 - 7312097
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||  ||||||| ||||||| ||| ||||| | |||||||||||| ||||||||| |||  |||||||||||| |||||||      
T  7312259 tctttttctctctatttcaaattaaataaatgatttt-cacgtagatctaggttttttcttcgtgatttcgt-atctaagtgtggtggtgtgttgttcat 7312162  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgat 202  Q
      |||||||     ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  7312161 tgtcttgtg-----ttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatcgat 7312097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 33291577 - 33291337
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    ||||||| |||  |||||| ||||||||||||||| |||||| || | || |||||||||  ||||||| |||||  |||||||||||  |||||||| |    
T  33291577 tttttctttctatttcaatataaataagtgatttt-cacataaatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 33291479  T
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttg 231  Q
     |||||||||| |||||||||||| ||||  |  |||||||||||||| ||||||||||||||||   |  |||| | ||||| ||  ||| ||||||||    
T  33291478 gtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgttg 33291379  T
Q  232 cagattcagagtc-atgtgtattccggtcactttaattttat 272  Q
    ||||||| ||| | |||  |||||||||||||||||||||||    
T  33291378 cagattcggaggcgatggatattccggtcactttaattttat 33291337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 270
Target Start/End: Complemental strand, 50272301 - 50272061
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| |  ||||||| |||  ||||||| || ||  ||| ||||| |  ||||||||    
T  50272301 tctttttctctttatttcaatctaaataagtaatttt-cacatagatctaagtttttttctttgtgatttcatcttctaagtttggtgatttgttgttcg 50272203  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
     | | |||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||| ||||||| |||| | ||||| ||  ||| ||||||    
T  50272202 tcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgt 50272103  T
Q  230 tgcagattcagagtc-atgtgtattccggtcactttaatttt 270  Q
    ||||||| | ||| | |||  |||||| ||||||||||||||    
T  50272102 tgcagatccggaggcaatgaatattccagtcactttaatttt 50272061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 20266222 - 20266397
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  20266222 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagctttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 20266320  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||| ||  |||||||||||||||| ||  |||||||  ||||| ||||||||||||||||||||||||||    
T  20266321 tcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtggacatttgattcatattgaaagatcgattgttca 20266397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 30878995 - 30879170
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  || ||||||||||||||||||| ||||||||| |  |||||||  |||  | ||||| ||||   ||||||||| |  |||||||    
T  30878995 tctttttctctttattttaatctaaataagtgatttt-cacatagatctatgttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttc 30879093  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | ||||||||| ||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  30879094 gtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 30879170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 50148392 - 50148465
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||| | |||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  50148392 tcttgtgcgacattgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 50148465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 19723256 - 19723382
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  |||||||| |    
T  19723256 tttttctctcta-ttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 19723353  T
Q  134 atcttgtgcggcgttgtttgatttcccgt 162  Q
     |||| |||||||||||||||||| ||||    
T  19723354 gtcttctgcggcgttgtttgattttccgt 19723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 30818506 - 30818337
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||| |||||||||| || | | |||||| ||  ||||||| |||||  |||||||||||  ||||||||     
T  30818506 tctttttctctctatttcaatctaaataagtga-ttttcacataaatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgt 30818408  T
Q  133 catcttgtgcggcgttgtttgatttcccgt-attgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||     |||||||||| |||||| |||| |||||||||||||| |||| ||| |||||||||||| ||||    
T  30818407 cgtcttgt-----gttgtttgatctcccgtcattg-tgcggtgttcatttgattcttatcgaaagatcgattattca 30818337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 47132865 - 47132968
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || ||||| || | || |||||||| | | |||||||||||||||| ||||| ||| |||||||||||||| |||  ||||||||||||    
T  47132865 tgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaa 47132964  T
Q  196 gatc 199  Q
    ||||    
T  47132965 gatc 47132968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 12635160 - 12635235
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| | |||||||||||||||||||||||  ||| |||| | |||||||||||  ||||||||||||||||    
T  12635160 gttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatc 12635235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 16262823 - 16262922
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||| ||| || |||||||| | ||||||||| |   | |||||||||||||||||||||| ||| |||||| ||||||| ||| |||||||||||||    
T  16262823 tgattttgtcgtctgagtgtggcgatgcgttgttggttgttttgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaa 16262922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 40646700 - 40646759
Alignment:
Q  143 ggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgat 202  Q
    |||||||||||||||||||| ||  ||||||||| |||| ||||||||||||||||||||    
T  40646700 ggcgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaagatcgat 40646759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 33817263 - 33817167
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||   ||||| | | |||| ||| ||||||||||||||| ||| || || |||||||||||| ||||||||||||||||||||| ||||    
T  33817263 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtctt-tttcggtgttcatttgattcatattgaaagatcgattattca 33817167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 33876733 - 33876637
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||   ||||| | | |||| ||| ||||||||||||||| ||| || || |||||||||||| ||||||||||||||||||||| ||||    
T  33876733 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtctt-tttcggtgttcatttgattcatattgaaagatcgattattca 33876637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 45805877 - 45805747
Alignment:
Q  145 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacgttgcagattcaga 241  Q
    ||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||||||| |||| | |||| |||||  || ||||||||||||| | ||    
T  45805877 cgttgtttgctttcccgtcttcttgcggtgttcatttcattccgattgaaagatcgattattcaatcaaag-atttgaacgtcaacgttgcagatccgga 45805779  T
Q  242 -gtcatgtgtattccggtcactttaattttat 272  Q
     | ||||  ||||||||| |||||||||||||    
T  45805778 ggccatggatattccggtgactttaattttat 45805747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 29837694 - 29837635
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaa 183  Q
    |||||||||  ||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  29837694 gttgttcgatgtcttgtgcgacgttgtttgatttcccgtcttgttgcggcattcatttaa 29837635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 32679242 - 32679163
Alignment:
Q  78 attttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttc 158  Q
    ||||||||||||| ||| ||||||| || || ||||| || | || |||||||| ||||||||||||||| ||||||||||    
T  32679242 attttggtttttt-ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgatttc 32679163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 14872633 - 14872706
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||| | ||||||||||||||   ||||||| ||| |||| |||||||||||||| ||| ||||||||||||||    
T  14872633 gttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttagttc-tattgaaagatcga 14872706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 49626904 - 49626978
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| | |||||||||||||||||||||||  | | ||||||||||||||  ||  ||||||||||||||||    
T  49626904 gttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttc-gttggttcatattgaaagatc 49626978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 25728120 - 25728064
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 90  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||    
T  25728120 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 25728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 799888 - 799812
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 200  Q
    |||||| | |||||||||| | ||||||||| ||   || || |||||||||||||||  |||||||||||||||||    
T  799888 gttgtttgtcatcttgtgcagtgttgtttgaatttttgtcttattgcggtgttcatttggttcatattgaaagatcg 799812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 5855922 - 5856002
Alignment:
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaa 213  Q
    ||||||||||| | |||||||||||  ||| |||||| |||||| ||||  ||  |||| ||||||| |||||||||||||    
T  5855922 catcttgtgcgacattgtttgattttacgtcttgttgtggtgtttattttgtttttattaaaagatcaattgttcagttaa 5856002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 27456555 - 27456607
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| ||| |||| ||||||||| |||| ||| ||||||||||||||    
T  27456555 gtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcga 27456607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 30558813 - 30558736
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtg 114  Q
    ||||||| |||  ||||||||||| |||||||||  |||| |||| | ||||||||||| |||||||| ||||| |||||    
T  30558813 tttttctttctatttcaatctaaaaaagtgattt--cacacagatctaggttttttctttatgatttcatcatctgagtg 30558736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 41994428 - 41994492
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| |||||||||||||||   | |||||| ||||||| |||  ||||||||||||||||    
T  41994428 tcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatc 41994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 7e-58; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 35965136 - 35964895
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| ||||||||     
T  35965136 tctttttctctctatttcaatctgaataagtgatttttcacatagatctaggtttttttttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgt 35965037  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgtt 230  Q
    | || |||| |||||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||||||| |||| | ||||| || | || |||||||    
T  35965036 cgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatattaaaagatcgattattcaatcaaagatttggacgtcaacgtt 35964937  T
Q  231 gcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | ||| |||| ||||| | ||||||||||||||||    
T  35964936 gcagatccggaggcatgagtatttcagtcactttaattttat 35964895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 18139071 - 18138899
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  ||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||| | ||||||||||||| |||||||| | |    
T  18139071 ttttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgt 18138972  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||||||||||||| || | ||||||| |||||||||| |||  |||||||||||||||| ||||    
T  18138971 cttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattca 18138899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 49126284 - 49126112
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  ||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||| | ||||||||||||| |||||||| | |    
T  49126284 ttttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgt 49126185  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||||||||||||| || | ||||||| |||||||||| |||  |||||||||||||||| ||||    
T  49126184 cttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattca 49126112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 51317914 - 51318155
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  ||||||||| |  ||||||||     
T  51317914 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtgatttgttgttcgt 51318012  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 229  Q
    | ||||||||||| |||||||||||||||| || |||||||||| |||| |||||||||||||||| |||||||||  | || |||||| |   ||||||    
T  51318013 cgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagattgattgttca-atcaacaatttgggcgtcaacgt 51318111  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || ||||||  |||||||||||||||||||||||    
T  51318112 tgcagatccggaggtcatggatattccggtcactttaattttat 51318155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 46991287 - 46991050
Alignment:
Q  37 tttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    |||||||||  |||||||||||| ||||||||| ||||||||| | | |||||| ||||||||||| |||||| ||||||||||||| |||||| | | |    
T  46991287 tttctctctatttcaatctaaatgagtgatttt-cacatagatctagatttttttcttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgt 46991189  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgc 232  Q
    ||| || |||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||| |||| | |||| ||||| |   |||||||||    
T  46991188 cttctgtggcgttgtttgatttcccatcttgttgcggtgttcatttgattcatattgaaatatcgattattcaatcaaag-atttgggtgtcaacgttgc 46991090  T
Q  233 agattcagagtcatgtgtattccggtcactttaattttat 272  Q
    ||||  |||| ||| ||||| ||| |||||||||||||||    
T  46991089 agatctagagacatatgtatcccgatcactttaattttat 46991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 2624441 - 2624611
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 146  Q
    |||||||||||||||||||||| ||||||||| | |||||||| |||| ||||||||||||  ||||||||||||| |||||||| | ||||||||||||    
T  2624441 ttcaatctaaataagtgatttt-cacatagatctaggtttttttcttcgtgatttcgtcat--gagtgtggtggtgtgttgttcgtcgtcttgtgcggcg 2624537  T
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga-tcgattgttcagttaaagaatt 219  Q
    | |||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||| |||| | ||||||||    
T  2624538 tagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagattcgattattcaatcaaagaatt 2624611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 272
Target Start/End: Original strand, 25273811 - 25274053
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||    |||  ||||||| |||||  |||||||||||  ||||||||    
T  25273811 ttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 25273909  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacg 228  Q
     | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||| |||||| |   |||||    
T  25273910 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaa-aatttgggcgtcaacg 25274008  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| | || | ||||  |||||||||||||||||||||||    
T  25274009 ttgcagatccggaggccatggatattccggtcactttaattttat 25274053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 10389914 - 10389740
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | ||||||||| |  ||||||| |||||  |||||||||||  ||||||||     
T  10389914 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttccttttgatttcatcatctaagtgtggtggtttgttgttcgt 10389816  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||| ||||||| ||||    
T  10389815 cgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaatatcgattattca 10389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 4643786 - 4644028
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||| | |   |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  4643786 tctttttctctctatttcaatctaaataagtga--tttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 4643883  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||| |    
T  4643884 gtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaaag 4643983  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| | || ||||||  ||||||||||| |||||||||||    
T  4643984 ttgcagatccggaggtcatgaatattccggtcaatttaattttat 4644028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 9529039 - 9528796
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| |||||||||||  |||||||  |||  ||||||| |||||  |||||| ||||  |||||||    
T  9529039 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttatgttttttttctttgtgatttcatcatctaagtgtgatggtttgttgttc 9528941  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gcaacg 228  Q
    | | |||||||||||||||||||||||||||| ||  |||| ||||||||| ||||||||||||||||||||| |||| | ||||| || ||   |||||    
T  9528940 gtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacg 9528841  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||||   || ||||||  |||||||||||||||||||||||    
T  9528840 ttgcagatctggaggtcatggatattccggtcactttaattttat 9528796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 10359707 - 10359467
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  ||| ||||||||||||||||||  ||||| || | |||||||||||| ||||||| |||||  |||||||||||  ||||||||     
T  10359707 tctttttctctctatttcgatctaaataagtgatttta-acatatatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgc 10359609  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 229  Q
    | |||| ||||| ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||| |||| | |||| ||||| |   ||||||    
T  10359608 cgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaataaaag-atttgggcatcaacgt 10359510  T
Q  230 tgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||||||   ||| ||||  |||||| ||||||||| ||||||    
T  10359509 tgcagatcttgaggcatggatattccagtcactttatttttat 10359467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 272
Target Start/End: Complemental strand, 27593952 - 27593748
Alignment:
Q  69 ttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgtt 168  Q
    ||||||||||| |   |||||||||| ||||||||| ||| ||||||||||||| |||||||| ||||||||||| | || ||||||||||||| || ||    
T  27593952 ttcacatagatctatattttttcttcgtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtcttttt 27593853  T
Q  169 gcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacgttgcagattcagagtcatgtgtattccggtcactttaat 267  Q
    ||| |||| |||||||||||||||||||||||||| |||| | ||||| || | | |||| ||||||||   ||| |||| ||||||| |||||||||||    
T  27593852 gcgatgtttatttaattcatattgaaagatcgattattcaataaaagatttggagtcaacattgcagatctggagccatgagtattcctgtcactttaat 27593753  T
Q  268 tttat 272  Q
    |||||    
T  27593752 tttat 27593748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 35261137 - 35261285
Alignment:
Q  50 caatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttg 149  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||  |||||  |||||||||||| |||||| | | |||| ||||||||||    
T  35261137 caatctaaataagtgatttt-cacatagatttaggttttttcttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgttg 35261235  T
Q  150 tttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| |||| || ||||||||||||||| ||||||||| |||||||    
T  35261236 tttgattttccgtcttcttgcggtgttcatttgattcatattaaaagatc 35261285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 12265398 - 12265557
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||||||||||||| | |||||| ||| | |||||| |||||| |||||||| |||  |||||||| | || ||||||||||    
T  12265398 ttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgattttgtcatctgagtgtggcggtttgttgttcgtcgtc-tgtgcggcgt 12265496  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||| ||||| |||| |||||||| || ||||||||||||||||| ||| ||||    
T  12265497 tgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaaagatcaattattca 12265557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 38706871 - 38706696
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  38706871 tctttttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 38706773  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||||| ||||||||| ||||||||| ||  ||||||||| |||| ||| ||||||||||||||||| ||||    
T  38706772 tcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgttaatttgatttatattgaaagatcgattattca 38706696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 269
Target Start/End: Complemental strand, 53616797 - 53616572
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 145  Q
    |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | |||||||||||    
T  53616797 ttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggc 53616699  T
Q  146 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagt 243  Q
    ||||||||||||||||| ||  |||||||||||||| ||||||||||||||||| |||||||| | ||||| ||  ||| ||||||||||||| | |||     
T  53616698 gttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcagatccggagg 53616599  T
Q  244 c-atgtgtattccggtcactttaattt 269  Q
    | |||  ||||||||||||||||||||    
T  53616598 caatggatattccggtcactttaattt 53616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 203
Target Start/End: Original strand, 56194527 - 56194699
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcat---gatttcgtcatccgagtgtggtggtgcgttgtt 129  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| ||| |   |||||| |||||  |||||||||||  ||||||    
T  56194527 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 56194625  T
Q  130 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
    || | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  56194626 cgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgatt 56194699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 29965577 - 29965802
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 145  Q
    |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | |||||||||||    
T  29965577 ttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggc 29965675  T
Q  146 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcaga- 241  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||||||| ||||||||| | |||| ||||| |   ||||||||||||| | ||     
T  29965676 gttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaag-atttgggcatcaacgttgcagatccggag 29965774  T
Q  242 gtcatgtgtattccggtcactttaattt 269  Q
    || |||  ||||||||||||||||||||    
T  29965775 gtaatggatattccggtcactttaattt 29965802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 31381832 - 31381591
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  31381832 tctttttctctctttttcaatttaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 31381734  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | |||||||| |||||||||||||| |||| ||  ||||||||| |||| ||||||||| ||||||||||| |||| | ||||| ||  ||| |||| ||    
T  31381733 cgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgggcgtcaacatt 31381634  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||| |||| || ||||||  || ||||||||||||||||||||    
T  31381633 gcaaattcggaggtcatgaatactccggtcactttaattttat 31381591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 868107 - 868265
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||| ||||| ||||||||| | | ||||| |||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||    
T  868107 ttcaatctaaataagttatttt-cacatagatctagattttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 868204  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||| ||||    
T  868205 tgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcaattattca 868265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 3336302 - 3336142
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcgg-cg 146  Q
    ||||||||||| |||| ||||| |||||  || | |||||||||||| |||||| |||||| ||||||||||||| |||||||| | || ||||||| ||    
T  3336302 ttcaatctaaacaagttatttt-cacatctatctaggttttttcttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacg 3336204  T
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||| || | |||||||||||||||||| |||||||||||||||| |||| ||||    
T  3336203 ttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagattgattattca 3336142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 21090081 - 21090241
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||  | | |||||||  ||||||||     
T  21090081 tctttttctctctatttcaatataaataagtgatttt-cacatagatttaggttttttcttcgtgatttcatcatctaaatatggtggtttgttgttcgt 21090179  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 194  Q
    | |||||| || |||||||||||||  ||| || ||||||||||||||| ||||||||||||    
T  21090180 cgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaa 21090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 43444321 - 43444496
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||||||||| |||||| || | |||||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  43444321 tctttttctctttatttcaatctaaataagtgatttt-cacatatatctaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 43444419  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||||||| |||| |   |||||||||||||| ||||||||||||||||||||||||||    
T  43444420 tcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatcgattgttca 43444496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 8009520 - 8009347
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  8009520 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctag-ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 8009423  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||||||||||||||||||||||| ||  | |||||||||||| |||| ||  ||||||| |||| ||||    
T  8009422 cgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattcttacagaaagattgattattca 8009347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 34024597 - 34024424
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||| ||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  34024597 tctttttctctctatttcaatctaaataagttatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgt 34024499  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||  | ||||||||||||| || | || ||||||||||| ||| ||||||||||||||||||||| ||||    
T  34024498 cgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc-tttgattcatattgaaagatcgattattca 34024424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 272
Target Start/End: Complemental strand, 43154179 - 43153933
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagat--------tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg 127  Q
    ||||||||||  |||||||||||||||||||||| |||||||||        ||| ||||||||||  ||||||  ||||   |||||||||||  ||||    
T  43154179 ttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttgttttttctttgtgattttatcatttaagtgtggtggtttgttg 43154081  T
Q  128 ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-ca 225  Q
    |||| | ||||||| |||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||    
T  43154080 ttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtca 43153981  T
Q  226 acgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||| ||||| | || | ||||  |||||||||||||||||||||||    
T  43153980 acgttacagatccggaggccatggatattccggtcactttaattttat 43153933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 33 - 269
Target Start/End: Complemental strand, 50766670 - 50766434
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||| ||||||| ||||||||| |  ||||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  50766670 tctttttctctttatttcaatctaaataaatgatttt-cacatagatctaagtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 50766572  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
       |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||| |||||||| | ||||| ||  ||| ||||||    
T  50766571 ---tcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgagcgtcaacgt 50766475  T
Q  230 tgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    ||||||| | ||| | |||  ||||||||||||||||||||    
T  50766474 tgcagatccggaggcaatggatattccggtcactttaattt 50766434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 9283854 - 9284014
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttc-ttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 146  Q
    ||||||||||||||||||||||| |||||||| | ||||||||  ||  | ||||| |||||  ||||||||| |  |||||| | | ||||||| ||||    
T  9283854 ttcaatctaaataagtgattttt-acatagatctaggtttttttatttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgtggcg 9283952  T
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  9283953 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 9284014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 52098065 - 52097835
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgc---gttgttcgacatcttgtgcgg 144  Q
    |||||||||||||||||||||||| ||||||  |   |||| ||||| |||||| ||||||||||||||||||||    |||||| |   |||||||| |    
T  52098065 ttcaatctaaataagtgatttttcgcatagaactaaattttctcttcgtgattttgtcatccgagtgtggtggtggtgtgttgtttgttgtcttgtgcag 52097966  T
Q  145 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacgttgcagattcaga 241  Q
     ||||||||||||||| |||| |||  |||||||||| ||||||||||||||||| ||| |||| | ||||| || |  || |||||||||||||   ||    
T  52097965 agttgtttgatttcccctattcttgtagtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggccgtcaacgttgcagatctgga 52097866  T
Q  242 gtcatgtgtattccggtcactttaattttat 272  Q
      ||||  |||||||||||||||||||||||    
T  52097865 tgcatggatattccggtcactttaattttat 52097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 47417681 - 47417765
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  47417681 gttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 47417765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 198
Target Start/End: Complemental strand, 9645710 - 9645545
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||| |||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||   |||||| |||||  |||||||||||| ||||||||    
T  9645710 tctttttgtctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgcgatttcatcatctaagtgtggtggtgtgttgttcg 9645612  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
     | ||||||||||||||||||||||| ||||  |  |||| ||||||||| ||||||||||| ||||    
T  9645611 tcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcgctgttcatttgattcatattgagagat 9645545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 221
Target Start/End: Original strand, 20569182 - 20569371
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttgg----ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||| |  |||||||||||||| ||| ||||||||||||| | ||    ||||||||| || ||||| |||||  ||||||||| |  |||||||    
T  20569182 tttttctctttatttcaatctaaataaatga-ttttcacatagatctaggttttttttttctttataatttcatcatctaagtgtggtgatttgttgttc 20569280  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg 221  Q
    | | |||| ||||| |||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||||    
T  20569281 gtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttg 20569371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 6972790 - 6972913
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||||||||||||| ||||| || || |||| |||||||||| ||    
T  6972790 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttat 6972889  T
Q  185 tcatattgaaagatcgattgttca 208  Q
    || |||||||||||||||| ||||    
T  6972890 tcctattgaaagatcgattattca 6972913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 2115749 - 2115574
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| ||||||||  |||  | ||||| |||||  ||||||||| |  ||||||     
T  2115749 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttt 2115651  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | |||||||||  ||||||||||||| | | ||  |||| | ||||||||||||||||||||||||||||||||||    
T  2115650 gtcgtcttgtgcgt-gttgtttgatttctcatcttcgtgcgatattcatttaattcatattgaaagatcgattgttca 2115574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 37188753 - 37188514
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||||||||| |||||| || | | |||||||||  ||||||| ||||   |||||||||||  ||||||||     
T  37188753 tctttttctctatatttcaatctaaataagtgatttt-cacatatatctag-ttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgt 37188656  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | | |||||||||| ||||||||||||||  || ||||||||||||| | |||||| ||| |||||||||| |||| | ||||| ||  ||| |||||||    
T  37188655 cgttttgtgcggcgctgtttgatttcccgcctttttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgtt 37188557  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | || | ||||  |||||| ||||||||||||||||    
T  37188556 gcagatccggaggccatggatattcctgtcactttaattttat 37188514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 49410232 - 49410326
Alignment:
Q  114 gtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||  |||||||| | |||||||| ||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 49410326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 32952907 - 32952670
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||  |||||||||| |||||||||||||| | | |||||||||  |||||||||||||  |||||| ||||| |||||| |     
T  32952907 tctttttctctctatttcaaattaaataagtg-tttttcacatagatctag-ttttttctttgtgatttcgtcatctaagtgtgttggtgtgttgtttgt 32952810  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | |||| ||||| |||||||||||| |  | ||||| ||||||||||||||||||||||||||   ||||| |||| | ||||| ||  ||| ||| |||    
T  32952809 cgtcttatgcgg-gttgtttgattttca-tcttgttacggtgttcatttaattcatattgaaaatacgattattcaatcaaagatttgagcgtcaatgtt 32952712  T
Q  231 gcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||| | | ||||||||  ||||||||||| |||||||||||    
T  32952711 gcaggtccggagtcatggatattccggtcaatttaattttat 32952670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 14183731 - 14183972
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||  ||| |  ||||||| |||  |||||||  ||||  |||||||||||  ||||||||    
T  14183731 tctttttctctctatttcaatctaaataagtgatttt-cacaaggatctaagtttttttctttgtgatttcaccatctaagtgtggtggtttgttgttcg 14183829  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgt 229  Q
       |||||||||  |||||||||||| | || ||  |||||||||||||| ||||||||||||||||||| | |||| | ||||| ||| ||| ||||||    
T  14183830 tagtcttgtgcgt-gttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaaagatcgactattcaatcaaagattttggcgtcaacgt 14183928  T
Q  230 tgcagattcagag-tcatgtgtattccggtcactttaattttat 272  Q
    ||||||  | |||  ||||  |||||||||||||||||||||||    
T  14183929 tgcagaaccggagaccatggatattccggtcactttaattttat 14183972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 39 - 272
Target Start/End: Original strand, 44947343 - 44947582
Alignment:
Q  39 tctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||||  ||||||||||||||||||||| | ||||||| | ||||||||    |||  ||||||| | |||  |||||||||||  |||| | |       
T  44947343 tctctctctctcaatctaaataagtgatttt-cgcatagatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttgttggttgttg 44947441  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgc 232  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||| ||| ||||||||||||||||| |||| | ||||| ||  ||| |||||||||    
T  44947442 tcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgc 44947541  T
Q  233 agattc-agagtcatgtgtattccggtcactttaattttat 272  Q
    |||| | |  | ||||  |||||||||||||||||||||||    
T  44947542 agatccgaaggccatggatattccggtcactttaattttat 44947582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 1531841 - 1532011
Alignment:
Q  39 tctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatc 136  Q
    |||||||  |||||||||||||||||| ||||||||||||| | |   |||||||||  ||||||| |||||  |||||||||||  |||||  | | ||    
T  1531841 tctctctatttcaatctaaataagtga-ttttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtc 1531939  T
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||| ||||||||||||||||| || ||  ||||||||| |||| |||||| |||||||||| ||| ||||    
T  1531940 ttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtttatttgattcatgttgaaagatcaattattca 1532011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 43853449 - 43853521
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 196  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||  |||||||||||||    
T  43853449 gttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaag 43853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 18048863 - 18048964
Alignment:
Q  97 gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 196  Q
    ||||||||||||||| || |||| || |||||| | | ||||||| |||||||||||||||  ||  |||||||||||||| ||| ||||||||||||||    
T  18048863 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaag 18048962  T
Q  197 at 198  Q
    ||    
T  18048963 at 18048964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 187
Target Start/End: Complemental strand, 1931856 - 1931723
Alignment:
Q  53 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 152  Q
    ||||||||||| ||||| |||| |||| | ||||||||| |  ||||||| |||||  ||||| |||||| |||||||  | |||||| || | ||||||    
T  1931856 tctaaataagttatttt-cacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgttt 1931758  T
Q  153 gatttcccgtattgttgcggtgttcatttaattca 187  Q
     ||||||||| |||||||||||||||||| |||||    
T  1931757 catttcccgtcttgttgcggtgttcatttgattca 1931723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 272
Target Start/End: Complemental strand, 45228124 - 45227960
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagt 210  Q
    |||||||||||  |||||||| | ||||||||||  |||||| ||||||||| ||  | || | ||||||| ||| | ||||||||||||||| |||| |    
T  45228124 agtgtggtggtttgttgttcgccgtcttgtgcggtattgtttaatttcccgtcttcgtacgatattcatttgatttacattgaaagatcgattattcaat 45228025  T
Q  211 taaagaatt-tgcg-caacgttgcagattcagag-tcatgtgtattccggtcactttaattttat 272  Q
     ||||| ||  ||| ||||||||||||||| |||  ||||  |||||||||||||||||||||||    
T  45228024 caaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattttat 45227960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 6155355 - 6155253
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || ||||| |||| || ||||| || ||||||||||| ||||||||||||||  || |||| || |||||| ||| |||||||||||||    
T  6155355 tgatttcgtcgtctgagtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtttgattcatattgaaa 6155257  T
Q  196 gatc 199  Q
    ||||    
T  6155256 gatc 6155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 36204526 - 36204415
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcgg-cgttgtttgatttcccgtattgttgcggtgttcatttaa 183  Q
    |||||||||| |||||||||| ||  |||| || | || |||||||| | || ||| ||| |||||||||||||| | ||||||||||||||||||||      
T  36204526 ttttttcttcgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttgg 36204427  T
Q  184 ttcatattgaaa 195  Q
    ||||||||||||    
T  36204426 ttcatattgaaa 36204415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 28857420 - 28857484
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||||||||||||||| | ||| | |||||||||||| |||  ||||||||||||||||    
T  28857420 tcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatc 28857484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 22300856 - 22300931
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| | |||||||||||||||||||||||| |||  ||||||||||||  ||||  |||| ||||||||||    
T  22300856 gttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatc 22300931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 52944318 - 52944393
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| | | |||||||||||||||| ||||  ||| |||||||||||||| |||  ||||||||||||||||    
T  52944318 gttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatc 52944393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 2069680 - 2069611
Alignment:
Q  126 tgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||| |||| |||||| |||||||||||||| | | |||||||||| |||||||  ||||||||||||    
T  2069680 tgttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaa 2069611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 51888351 - 51888238
Alignment:
Q  86 tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaatt 185  Q
    ||||| ||| |||||||||  || ||||| || | || |||||||  | |||| |||| |||||||||||||| | | |||||||||||||| |||  ||    
T  51888351 ttttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggtt 51888252  T
Q  186 catattgaaagatc 199  Q
    ||||||||||||||    
T  51888251 catattgaaagatc 51888238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 52934046 - 52933970
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtg-ttcatttaattcatattgaaagatc 199  Q
    |||||||| ||| |||||| ||||||||||||||| | | ||||||||||| ||  ||| |||||||||||||||||    
T  52934046 gttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaagatc 52933970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 1008223 - 1008289
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatt 100  Q
    |||||||||||||  || ||||||||||||||| |||||||||| |||| | |||||||||| |||||    
T  1008223 tctttttctctctattttaatctaaataagtga-ttttcacataaatttagtttttttcttcgtgatt 1008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 9713919 - 9713994
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| | || |||||| |||||||||||||| | ||||||||||| |||| |||  ||||||||| ||||||    
T  9713919 gttgttcgccgtcatgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattggaagatc 9713994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 22038904 - 22038829
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| | | ||||| |||||||||||||||| ||| |||||| |||| || |||  ||||||||||||||||    
T  22038904 gttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatc 22038829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 36161729 - 36161792
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
    ||||||||| |||||||||||||  ||| |||||||||||||| |||  ||||||| |||||||    
T  36161729 tcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagat 36161792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 21365153 - 21365091
Alignment:
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    ||||||||||||||||||| ||  |  |||||| ||| ||||||| |||||||||||||||||    
T  21365153 ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaagatc 21365091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 9643369 - 9643470
Alignment:
Q  98 atttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 197  Q
    |||||||| |||||||| |  | || |||||||| | ||||| ||| |||||||||||||| | | ||||||| |||||| |||  |||||||| |||||    
T  9643369 atttcgtcgtccgagtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaaga 9643468  T
Q  198 tc 199  Q
    ||    
T  9643469 tc 9643470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 23100617 - 23100673
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtga-tttttcacatagattttggtttttt 90  Q
    |||||||||||  |||||||||||||||||| ||||| ||||||||||  |||||||    
T  23100617 tttttctctctaattcaatctaaataagtgatttttttacatagatttatgtttttt 23100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 33342375 - 33342599
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||| |||||||  | |||| ||||||||    
T  33342375 ttcaatctaaataagtgatttttcacatagatctaggttttttcttcgtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgt 33342474  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cgcaacgttgcagattcagagtcat 246  Q
    | ||||||||||||||||||||||||||| |||| |||||||||| |||||| ||| |||| | |||||||| | ||  |||||||||||   ||| |||    
T  33342475 tttttgatttcccgtattgttgcggtgtttatttgattcatattg-aagatcaattattcaatcaaagaattggacgtcacgttgcagatctggaggcat 33342573  T
Q  247 gtgtattccggtcactttaattttat 272  Q
    | |||||| |||||||||||||||||    
T  33342574 gagtattcaggtcactttaattttat 33342599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 16794216 - 16794401
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  ||||||||||||||||||||||||||||| || | ||||||| |||| ||||||| ||||||||| |||||| |  ||||||||     
T  16794216 tctttttctctctaattcaatctaaataagtgatttttcacataaatctaggttttt-cttcgtgatttcatcatccgagagtggtgttatgttgttcgt 16794314  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt 219  Q
    | ||||||||  ||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||| | ||||||||    
T  16794315 cgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatcaattattcaatcaaagaatt 16794401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 28239756 - 28239931
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| | |||||| ||| |  |||||||||||  |||||||| |||  ||||||||     
T  28239756 tctttttctctctatttcaatctaaataagtgttttttcacatagatctaggttttctctacgcgatttcgtcatttgagtgtggcggtttgttgttcgt 28239855  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||||||||||||||||| | |||||||||||||||||||||| ||| ||||||||||||| ||| ||||    
T  28239856 cgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatcaattattca 28239931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 272
Target Start/End: Complemental strand, 43192503 - 43192266
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  ||||||||||||||||| ||||| |||||||| | |||||||||||| ||||||| |||||  |||||||||||  |||||||| | |    
T  43192503 ttttctctctatttcaatctaaataagtggttttt-acatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 43192405  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgc 232  Q
    |||||||||||||||||||||| |||| || ||| ||||||||||| |||||| |||||||||||||| ||| | | ||  ||||| |   |||||||||    
T  43192404 cttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatcgattattc-gatcaaatatttgggtgtcaacgttgc 43192306  T
Q  233 agattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||| | ||| ||||  ||||||| |||||||||||||||    
T  43192305 agatccggagacatgaatattccgatcactttaattttat 43192266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 35580381 - 35580621
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||  |||||||||||  ||||||||     
T  35580381 tctttttctctctatttcaatttaaataagtgatttt-cacatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgt 35580479  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcgc---aacgt 229  Q
    | ||||||||| ||||||||||||| |||| || ||||||||||| ||| |||||||||||| |||||||| |||| | |||| ||||  ||   |||||    
T  35580480 cgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatcgattattcactcaaag-atttaggcatgaacgt 35580578  T
Q  230 tgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | ||  ||||  |||||||||||||||| ||||||    
T  35580579 tgcagatccggatgcatggatattccggtcactttagttttat 35580621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 11196828 - 11196986
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||    
T  11196828 ttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 11196926  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||| |||| || ||||||||||||||| |||||||||| |||||||||| ||||    
T  11196927 tgtttgattttccgtcttcttgcggtgttcatttgattcatattg-aagatcgattattca 11196986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 200
Target Start/End: Complemental strand, 15597312 - 15597161
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||||| ||| |    
T  15597312 ttcaatctaaataagtgatttt-cacatagatctaggttttttcttcatgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtgaggcct 15597214  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 200  Q
    || ||||||| |||| ||||| |||||||||||| ||||||||| || |||||    
T  15597213 tggttgattttccgttttgttacggtgttcatttgattcatattaaacgatcg 15597161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 39153291 - 39153062
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggt----tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcg 143  Q
    |||||| ||||||||||||||| ||||||||||| |||    ||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||      
T  39153291 ttcaatttaaataagtgatttt-cacatagatttaggtattttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtc 39153193  T
Q  144 gcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcag 240  Q
    |||||||| |||||| ||| ||||| || | ||||||| ||||| |||||||||| |||| |||| ||||| |||||| |   || |||||||||| | |    
T  39153192 gcgttgttcgatttcgcgtcttgttacgattttcatttgattcacattgaaagattgattattcaattaaa-aatttgggtgtcagcgttgcagatccgg 39153094  T
Q  241 agtcatgtgtattccggtcactttaattttat 272  Q
    || |||| |||||||| |||||||||||||||    
T  39153093 aggcatgggtattccgatcactttaattttat 39153062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 44100093 - 44099920
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| |  ||||||||||  ||||||  |||||  |||||||||||  ||||||||     
T  44100093 tctttttctctatatttcaatctaaataagttatttt-cacatagatctaagttttttctttgtgattta-tcatctaagtgtggtggtttgttgttcgt 44099996  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||| ||||    
T  44099995 cgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatcaattattca 44099920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 33896004 - 33896247
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  || ||||||||||||||| ||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  |||||||    
T  33896004 tctttttctctctatttaaatctaaataagtgacttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 33896102  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacg 228  Q
    | | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||||||| |||| | ||||| || | || |||||    
T  33896103 gtcttcttgtgcggcgttgtttgttttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggacgtcaacg 33896202  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| | || | ||||  ||||||||| |||||||||||||    
T  33896203 ttgcagatccggaggccatggatattccggtgactttaattttat 33896247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 11725604 - 11725786
Alignment:
Q  32 gtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||| |  ||||||||||||||||| |||||||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||     
T  11725604 gtctttttctctttatttcaatctaaataagtg-tttttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttca 11725702  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaaga 216  Q
     | ||||||||| | |||||||||||||| | || ||||||||||||| | |||||||||| |||||||||| |||| |||||||    
T  11725703 tcgtcttgtgcgacattgtttgatttcccattttcttgcggtgttcatctgattcatattg-aagatcgattattcaattaaaga 11725786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 272
Target Start/End: Original strand, 15046850 - 15047057
Alignment:
Q  67 ttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtatt 165  Q
    ||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||| |||||||| | |||||||||| | |||||||||||| || ||    
T  15046850 ttttcacatagatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgctgtttgatttcctgtctt 15046949  T
Q  166 gttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcagagtcatgtgtattccggtcactt 263  Q
    | |||| |||| |||| ||| ||||||||| ||||||| | || | ||||  || | || ||||||||||||| ||||| ||||||||||||| | ||||    
T  15046950 ggtgcgatgtttatttgattgatattgaaaaatcgatt-tccaataaaagttttggacgtcaacgttgcagatccagaggcatgtgtattccgattactt 15047048  T
Q  264 taattttat 272  Q
    |||||||||    
T  15047049 taattttat 15047057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 19876150 - 19876372
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| |||||||||   |||||||||||  ||||||| |||||  ||||| |||||  |||||||| | |||||||||||||    
T  19876150 ttcaatctaaataagtgatttt-cacatagatcaaggttttttctttgtgatttcatcatctaagtgtagtggtttgttgttcgtcgtcttgtgcggcgt 19876248  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcgc---aacgttgcagattcagag-t 243  Q
    ||||||||| ||||| || ||| ||||||||||| |||||||||| |||||||||| |||| | |||| ||||| ||   |||||||||||| | |||      
T  19876249 tgtttgattccccgtcttcttgtggtgttcatttgattcatattg-aagatcgattattcaatcaaag-atttgggcctgaacgttgcagatccggagac 19876346  T
Q  244 catgtgtattccggtcactttaattt 269  Q
    ||||  ||||||||||||||||||||    
T  19876347 catggatattccggtcactttaattt 19876372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 2655792 - 2655968
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | |   |||||||||  | ||||| |||||  ||||||||| |  |||||||    
T  2655792 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctagattttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 2655890  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | |||||||| ||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  2655891 gtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 2655968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 206
Target Start/End: Complemental strand, 9619519 - 9619345
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 129  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| | |||||| |||||    ||||| |||||   |||||||| |  ||||||    
T  9619519 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttagatttttt-ttcattgtaatttcatcatctacgtgtggtgatttgttgtt 9619422  T
Q  130 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgtt 206  Q
    || | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||    
T  9619421 cgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgtt 9619345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 269
Target Start/End: Complemental strand, 27747258 - 27747036
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||| ||||||||| ||||| |||||| || |  ||||||||||| |||||||  |||| | ||||||||||| |||||||| ||||||||||| |      
T  27747258 ttcaatttaaataagtaatttt-cacataaatataagttttttcttcgtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcgacag 27747160  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcagagtc 244  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||||| ||| |||| | |||| ||||| |   |||||||| |||| | ||  |    
T  27747159 tgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaag-atttgggcatcaacgttgtagatccggatgc 27747061  T
Q  245 atgtgtattccggtcactttaattt 269  Q
    ||| |||||||||||||||| ||||    
T  27747060 atgggtattccggtcacttttattt 27747036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 33298794 - 33299019
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | ||||||  |||  |||||||||||||| ||| | |||||| |||||||  | ||||||| || ||    
T  33298794 ttcaatctaaataagtgatttt-cacatagatctaggttttacctttgtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgtgtggtgt 33298892  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcagagtca 245  Q
    ||||||||||| ||| ||| |||||||||||||| |||||||| ||||||  |||| |||| ||||||| || | || ||||||||||||| | ||  ||    
T  33298893 tgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaagagtgattattcaattaaagatttggtcgtcaacgttgcagatacggatgca 33298992  T
Q  246 tgtgtattccggtcactttaattttat 272  Q
    || ||||||  ||||||||||||||||    
T  33298993 tgagtattctagtcactttaattttat 33299019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 4808902 - 4809062
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 146  Q
    |||||| ||||||||||||||| ||||||||| | | |||||| |||  | ||||| |||||  ||||||||| |  |||||||| | ||||||||||||    
T  4808902 ttcaatgtaaataagtgatttt-cacatagatctagctttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcg 4809000  T
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  4809001 ttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 4809062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 272
Target Start/End: Complemental strand, 32724647 - 32724400
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagat---------tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgtt 126  Q
    ||||||||||  |||||||||||||||||||||| |||||||||         ||| |||||||||| |||||||| |||||  | |||||||||  |||    
T  32724647 ttttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttgttttttctttatgatttcatcatctaactgtggtggtttgtt 32724549  T
Q  127 gttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-c 224  Q
    ||||| | ||||||||||||||||||||||||| || ||  ||| |||||||||| ||||||||||||| ||||||| |||| | ||||| ||  ||| |    
T  32724548 gttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtc 32724449  T
Q  225 aacgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||||||| | || | ||||  |||||||||||||||||| ||||    
T  32724448 aacgttgcagatccggaggccatggatattccggtcactttaatcttat 32724400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 9498748 - 9498585
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcg 143  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    |||  | ||||| |||||  ||||||||| |  ||||||||   |||||||||    
T  9498748 ttcaatctaaataagtgatttt-cacatagatttaggttttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgttgtcttgtgcg 9498650  T
Q  144 gcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    || |||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||||||||    
T  9498649 gctttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttca 9498585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 9072640 - 9072816
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  |||||| |||||||||||  ||||||||| || | |   |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  9072640 tctttttctctctatttcaatttaaataagtga-ctttcacataaatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 9072738  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
      ||||||||||||||||||||| |||||| | || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9072739 ttcatcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaaagatcgattattca 9072816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 14907085 - 14906842
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtt--ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||  |||||||  | ||||| |||||  | ||||||| |  ||||||     
T  14907085 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttctttttctttgtaatttcatcatcaaaatgtggtgatttgttgttt 14906987  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
    | | |||||||||||||||||||||||||||| ||  |||| ||||||||| |||| |||| |||||||||||||||| | || || ||  ||| |||||    
T  14906986 gtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcgtattaaaagatcgattgttcaatcaatgatttgggcgtcaacg 14906887  T
Q  229 ttgcagattcagagtc-atgtgtattccggtcactttaattttat 272  Q
    |||||||||  ||| | |||  |||||||||||||||||||||||    
T  14906886 ttgcagatttggaggcaatggatattccggtcactttaattttat 14906842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 34611729 - 34611969
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    ||||||| |||  |||| ||||||||||||||||| |||||| || | |||||||| |||  ||||||| |||||  |||||||||||  |||||||| |    
T  34611729 tttttctttctatttcagtctaaataagtgatttt-cacataaatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 34611827  T
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttg 231  Q
     ||||||||||||||||||||||| ||||  |  |||||||||||||| ||||||||||||||||   |  |||| | ||||| ||  ||| ||||||||    
T  34611828 gtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgttg 34611927  T
Q  232 cagattcagagtc-atgtgtattccggtcactttaattttat 272  Q
    ||||||| ||| | |||  |||||||||||||||||||||||    
T  34611928 cagattcggaggcgatggatattccggtcactttaattttat 34611969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 269
Target Start/End: Original strand, 11464146 - 11464333
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||  | ||||| |||||  ||||||||| |  |||||||| | ||||||||||||||||||||||||  || ||  |||||||||||||| ||    
T  11464146 ttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgat 11464245  T
Q  185 tcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    |||||||||||||||||||||||| | ||||| ||  ||| ||||||||||||| | ||| | |||  ||||||||||||||||||||    
T  11464246 tcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaattt 11464333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 42448189 - 42448013
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttt--ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  |||||||||||||||||||||  || |||||| | ||||||  |||||  ||||||| |||||  ||||||| |||  |||||||    
T  42448189 tctttttctctctatttcaatctaaataagtgattta-catatagatctaggttttgtttctttgtgatttcatcatctaagtgtggaggtttgttgttc 42448091  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | ||||||||||| |||||||||||  ||| ||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  42448090 gtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattca 42448013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 29777194 - 29777317
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||| | ||||||| |||||||| || ||||||||||||||| ||    
T  29777194 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttat 29777293  T
Q  185 tcatattgaaagatcgattgttca 208  Q
    || |||||||||||||||| ||||    
T  29777294 tcctattgaaagatcgattattca 29777317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 269
Target Start/End: Complemental strand, 43890286 - 43890046
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  ||||||||||||||||||||||  |||||||| | | ||||||  |||  | ||||| |||||  ||| ||||| |  |||||||    
T  43890286 tctttttctctttaattcaatctaaataagtgattttg-acatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttc 43890188  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
    | | ||||||||| |||| ||||||||||||| ||  | |||||||||||| |||||| ||||||||||||||||||| | ||||| ||  ||| |||||    
T  43890187 gtcgtcttgtgcgacgttatttgatttcccgtcttcgtacggtgttcatttgattcattttgaaagatcgattgttcaatcaaagatttgggcgtcaacg 43890088  T
Q  229 ttgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    |||||||| | ||| | |||  ||||||||||||||||||||    
T  43890087 ttgcagatccggaggcaatggatattccggtcactttaattt 43890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 23851553 - 23851480
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||| |||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  23851553 tcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 23851480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 203
Target Start/End: Original strand, 44577959 - 44578129
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||| ||||||||||  ||||||||| | |||||||| |||  | ||||| |||||  |||||||||||  ||||||||    
T  44577959 tctttttctctctatttcaatctaactaagtgattta-cacatagatctaggtttttttctttgtaatttcatcatctaagtgtggtggtttgttgttcg 44578057  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
     | |||||||||||||||||| || |||| | ||  |||||| || |||| ||| |||||||||||||||||    
T  44578058 tcgtcttgtgcggcgttgtttcatctcccatcttcatgcggtatttatttgatttatattgaaagatcgatt 44578129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 37566038 - 37565875
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    ||||| |||||  |||||||||||||| ||||||| ||||||||||| |||||||| |||   |||||| |||||  |||||||||||  ||| |||| |    
T  37566038 tttttatctctatttcaatctaaataattgatttt-cacatagatttaggtttttttctttgagatttcatcatctaagtgtggtggtttgttattcgtc 37565940  T
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
     ||||||||||| ||||||||||| || |  |  ||||| |||||||| ||||||||||||||||    
T  37565939 gtcttgtgcggcattgtttgattttccttcgtcgtgcggcgttcatttgattcatattgaaagat 37565875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 5333386 - 5333493
Alignment:
Q  92 ttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatatt 191  Q
    |||| |||||||||||| ||||| |||| || |||||||| | |||||||||| ||||||||||||  ||| ||||| |||||||| |||  ||| ||||    
T  5333386 ttcaagatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctatt 5333485  T
Q  192 gaaagatc 199  Q
    ||||||||    
T  5333486 gaaagatc 5333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 17949262 - 17949333
Alignment:
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||||||||||||| |||| ||  || ||||||||||| ||||||||||||||||||||| ||||    
T  17949262 ttgtgcggcgttgtttgatttgccgtcttcgtgtggtgttcattttattcatattgaaagatcgattattca 17949333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 15889581 - 15889644
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
    ||||||||||||||||||||||| || | | |||||| ||||||||| ||||||||||||||||    
T  15889581 tcttgtgcggcgttgtttgattttccttctggttgcgatgttcatttgattcatattgaaagat 15889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 8443650 - 8443536
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||| || ||||||||||| ||  |||| |||| || |||||||| | |||||||||||||||||||||| | ||| ||||||| |||||| |||  |    
T  8443650 ttttttttttatgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggt 8443551  T
Q  185 tcatattgaaagatc 199  Q
    |||  ||||||||||    
T  8443550 tcaatttgaaagatc 8443536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 29617374 - 29617301
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 197  Q
    |||||||| | |||||||||||| ||||||||||| ||| |||||||||||||| |||  ||| ||||||||||    
T  29617374 gttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaaga 29617301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 195
Target Start/End: Complemental strand, 24099400 - 24099284
Alignment:
Q  79 ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttca 178  Q
    ||||| ||| |||||| |||||||||| || ||||| |  | || |||||||| | || ||| | ||||||||||||||| | | |||||||||||||||    
T  24099400 ttttgttttattcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttca 24099301  T
Q  179 tttaattcatattgaaa 195  Q
    |||  ||||||||||||    
T  24099300 tttggttcatattgaaa 24099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 36532823 - 36532986
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||| |||||  |||||| |||||||| || |||||||||| |||| ||||||||||||  | |||  || ||   |||||||| || |||||||| |     
T  36532823 tttttatctctatttcaatttaaataag-gagttttcacatatatttaggttttttcttcgaggttttatcgtctaggtgtggtgttgtgttgttcgtcg 36532921  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||| ||||||||||||| | | |||||  |||||| ||||  ||| ||||||||||||    
T  36532922 tcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 8981167 - 8981227
Alignment:
Q  139 gtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||| ||||||||| ||| |||||||||||||| |||  || |||||||||||||    
T  8981167 gtgcggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatc 8981227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 14544978 - 14544926
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| ||| |||| |||||||||||||| ||| ||||||||||||||    
T  14544978 gtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcga 14544926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 21237788 - 21237852
Alignment:
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 197  Q
    ||||||||| |||||||||||| ||| ||| ||||||| |||||| |||  ||||||||||||||    
T  21237788 catcttgtggggcgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaaga 21237852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 3673405 - 3673507
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| ||  |||| |||| || |||||||| | |||| |||||   |||||||||||  || |||||||||||||| |||| ||| ||||||||    
T  3673405 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgg---tgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaa 3673501  T
Q  196 gatcga 201  Q
    ||||||    
T  3673502 gatcga 3673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 7883366 - 7883266
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||||||  |||| || | || |||||||| | ||||||||||||||   ||||||| ||| |||| ||||||||  || | ||||||||||||    
T  7883366 tgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaa 7883270  T
Q  196 gatc 199  Q
    ||||    
T  7883269 gatc 7883266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 14916315 - 14916214
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || | ||| || | |||||||| || | | |||||||||  |||||||||||  || |||||||||||||| |||  ||||||||||||    
T  14916315 tgatttcgtcgtctgggtgcggcgttgcgttgtccgtccttttgtgcggcactgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaa 14916216  T
Q  196 ga 197  Q
    ||    
T  14916215 ga 14916214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 27498438 - 27498389
Alignment:
Q  150 tttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    ||||||||| ||| |||| | |||||||||||||||| ||||||||||||    
T  27498438 tttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatc 27498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 1236785 - 1236722
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||||||||||||||||  | | ||||||||||||||  ||  ||||||||||||||||    
T  1236785 tcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc-gttggttcatattgaaagatc 1236722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 1239485 - 1239422
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||||||||||||||||  | | ||||||||||||||  ||  ||||||||||||||||    
T  1239485 tcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc-gttggttcatattgaaagatc 1239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 3240369 - 3240445
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 200  Q
    |||||||| | |||||| || |||||||||||||| ||| |||||| ||||||  |||  || ||||||||||||||    
T  3240369 gttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcg 3240445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 34489164 - 34489327
Alignment:
Q  33 tctttttctctctcgttcaatcta--aataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  |||||| ||  ||||||||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  34489164 tctttttctctctaattcaatatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttc 34489263  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 194  Q
    | | ||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  34489264 gtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 23947475 - 23947310
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| | |    
T  23947475 ttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgt 23947377  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgat 202  Q
    ||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||||    
T  23947376 cttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatcgat 23947310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 16419074 - 16419316
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagat-tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| |||| |||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  16419074 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctttgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 16419172  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgt 229  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||| ||||||| |||| | ||||| || | || ||||||    
T  16419173 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaaaatcgattattcaatcaaagatttggacgtcaacgt 16419272  T
Q  230 tgcagattcagagtc-atgtgtattccggtcactttaattttat 272  Q
    ||||||| | ||| | |||  ||||||||| |||||||||||||    
T  16419273 tgcagatccggaggcaatggatattccggtgactttaattttat 16419316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 33543780 - 33543615
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||| |||||||||||||||||  |||||| |||| ||||||||||||| || | |||||||| ||||||||     
T  33543780 tctttttctctatatttcaatctaaataagtaatttttcacatagatttaagttttt-cttcgtgatttcgtcatctgattatggtggtgtgttgttcgt 33543682  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    | ||||||||||||||||||||||| | || |||||||||||||||||  |||||||||||||||||||    
T  33543681 cgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttcatt--attcatattgaaagatcga 33543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 25337501 - 25337656
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 146  Q
    |||||||||||||| ||||||| |||||| || | |||||||| |||| ||||||||||||||||||||||||||| |||||||| | ||||| |||| |    
T  25337501 ttcaatctaaataaatgatttt-cacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtg 25337599  T
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||    
T  25337600 ttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatcgatt 25337656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 25064151 - 25064327
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  25064151 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 25064249  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  25064250 gtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 25064327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 12165772 - 12165930
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||  || |||  |||||  |||||||||||  |||||||| | |||||||||||||    
T  12165772 ttcaatctaaataagtgatttt-cacatagatttaggttttttctttgtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 12165870  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||| |||||| ||| || |||||||||||||||||||||||||||||||| |||| ||||    
T  12165871 tgttcgatttcacgt-ttcttgcggtgttcatttaattcatattgaaagattgattattca 12165930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 8196568 - 8196326
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| ||||   |||||||||||  ||||||||    
T  8196568 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatataagtgtggtggtttgttgttcg 8196470  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
     | |||||||||||||||||||||||||||| ||  |||||||||||||| |||| ||  |||||||||||| |||| | || || ||  ||| ||||||    
T  8196469 tcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcttacagaaagatcgattattcaatcaacgatttgggcgtcaacgt 8196370  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    || |||| | || | ||||| |||||||||||||||||||||||    
T  8196369 tgtagatccggaggccatgtatattccggtcactttaattttat 8196326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 35001506 - 35001748
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  || ||||||||||||||| |||| |||||||| | || |||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  35001506 tctttttctctctattttaatctaaataagtgactttt-acatagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 35001604  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgt 229  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||| ||| |||| | ||||| || | || ||||||    
T  35001605 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcaattattcaatcaaagatttggacgtcaacgt 35001704  T
Q  230 tgcagattc-agagtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | |  ||||||  ||||||||| |||||||||||||    
T  35001705 tgcagatccgaaggtcatgaatattccggtgactttaattttat 35001748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 200
Target Start/End: Complemental strand, 8028279 - 8028112
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| |  ||||||| ||| |||||||| |||||  |||||||||||  ||||||||    
T  8028279 tctttttctctctgtttcaatctaaataagtgatttt-cacatagatctaagtttttttctttatgatttcatcatctaagtgtggtggtttgttgttcg 8028181  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 200  Q
     | ||||||||||||||||||||||||||||  |  | |||||||||||| ||||||||| ||||||||    
T  8028180 tcgtcttgtgcggcgttgtttgatttcccgtcatcgtacggtgttcatttgattcatattaaaagatcg 8028112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 4468475 - 4468716
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||| ||||||||  |||||||||||||||||||||| || |||||| | |||||||||||  ||||||| ||||   |||||||||||  ||| ||||     
T  4468475 tcttgttctctctatttcaatctaaataagtgatttt-catatagatctaggttttttctttgtgatttcatcatataagtgtggtggtttgttattcgt 4468573  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gcaacgtt 230  Q
    | |||||||| |||||||||||||| |||| ||  ||| |||||||||| ||| |||||||| |||||||| |||| | ||||| || ||   |||||||    
T  4468574 cgtcttgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattgaaggatcgattattcaatcaaagatttggccgtcaacgtt 4468673  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| |||| ||||||  |||||||| ||||||||||||||    
T  4468674 gcagatccagaggtcatggatattccggccactttaattttat 4468716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 17237445 - 17237205
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| | |||||||||||  |||||||  ||||  |||||||||||  ||||||||     
T  17237445 tctttttctctatatttcaatctaaataagttatttt-cacatagatctaggttttttctttgtgatttcagcatctaagtgtggtggtttgttgttcgt 17237347  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 229  Q
    | |||||||||||| |||| |||||||||| || ||||||||||||| | |||||| ||| |||||||||| |||| | |||| ||||| |   ||||||    
T  17237346 cgtcttgtgcggcgctgttggatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaag-atttgggtgtcaacgt 17237249  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || | ||||  |||||||||||||||||||||||    
T  17237248 tgcagatccggaggccatggatattccggtcactttaattttat 17237205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 4352146 - 4351987
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttt-----ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgc 142  Q
    ||||||| |||||||||| |||||| |||||||| | ||||     |||||| |||||||||||||||||||||||| || |||||||| | |||| ||     
T  4352146 ttcaatccaaataagtga-ttttcatatagatttagtttttttgtcttcttcgtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgt 4352048  T
Q  143 ggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
    |||||| |||||||||||||  || |||||| |||||||||||||||||||||||||||||    
T  4352047 ggcgttatttgatttcccgtcatggtgcggtattcatttaattcatattgaaagatcgatt 4351987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 12652856 - 12653102
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-----cttcatgatttcgtcatccgagtgtggtggtgcgttg 127  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | | ||||||     |||  ||||||| |||||  |||||||||||  ||||    
T  12652856 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttttcctttgtgatttcatcatctaagtgtggtggtttgttg 12652954  T
Q  128 ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gca 225  Q
    |||  | ||||||||||||||||||||||| || | ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| || ||   ||    
T  12652955 ttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtca 12653054  T
Q  226 acgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||||||   || ||||||  |||||||||| ||||||||||||    
T  12653055 acgttgcagatctggaggtcatggatattccggtcgctttaattttat 12653102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 33740739 - 33740564
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||| |||  ||||||| |||||  ||||||| |||  ||||||||    
T  33740739 tctttttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttctttgtgatttcatcatctaagtgtggcggtttgttgttcg 33740641  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | | |||||||||||||||| |||| ||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  33740640 tcgttttgtgcggcgttgtttcatttaccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 33740564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 272
Target Start/End: Complemental strand, 4984682 - 4984486
Alignment:
Q  79 ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttca 178  Q
    |||| |||||| |||  ||||||| |||||  |||||||||||  |||||||| | |||||||||| ||||||||||||||||| ||  || ||||||||    
T  4984682 tttttgtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttca 4984583  T
Q  179 tttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||| ||||||||||||||||||||| |||| | |||| ||||| |   ||||||||||||||| || ||||||  ||||||| |||||||||||||||    
T  4984582 tttgattcatattgaaagatcgattattcaatcaaag-atttgggcatcaacgttgcagattcggaggtcatggatattccgatcactttaattttat 4984486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 198
Target Start/End: Complemental strand, 28635268 - 28635117
Alignment:
Q  48 ttcaatctaaataagtgatt-tttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 146  Q
    |||||| ||||||||||||| ||| |||||||| |  ||||||||| | ||||||||||||  |||||||| |||  |||||||| | |||||| ||| |    
T  28635268 ttcaatttaaataagtgattcttttacatagatctaagttttttctacgtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtg 28635169  T
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  28635168 ttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagat 28635117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 50 - 272
Target Start/End: Original strand, 4088393 - 4088618
Alignment:
Q  50 caatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgtt 148  Q
    |||||||||||||||||||| ||||||||| | | |||||| |||  ||||||| |||||  |||||||||||  |||||||  | ||||||||||||||    
T  4088393 caatctaaataagtgatttt-cacatagatctagttttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgtt 4088491  T
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtca 245  Q
    |||||||||||||| ||  |||| ||||||||| |||| ||  ||||||||||||||||| | ||||| ||  ||| ||||||||||||| | || | ||    
T  4088492 gtttgatttcccgtcttcgtgcgatgttcatttgattcttacagaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcca 4088591  T
Q  246 tgtgtattccggtcactttaattttat 272  Q
    ||  |||||||||||||||||||||||    
T  4088592 tggatattccggtcactttaattttat 4088618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 269
Target Start/End: Complemental strand, 7881264 - 7881024
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||| |   ||  ||||| |||||  ||||||||| |  |||||||    
T  7881264 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttc 7881166  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
    | | ||||||||||||||||||||||| || | ||  ||||||||||| || |||||||||||||||||||||||||| | ||||| ||  ||| |||||    
T  7881165 gtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaattgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacg 7881066  T
Q  229 ttgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    |||||||| | ||| | |||  ||||||||||||||||||||    
T  7881065 ttgcagatccggaggcaatggatattccggtcactttaattt 7881024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 269
Target Start/End: Original strand, 8496881 - 8497122
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgat---ttcgtcatccgagtgtggtggtgcgttgtt 129  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| ||| |  |   ||| ||||   |||| |||| |  ||||||    
T  8496881 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttttctttgtagtttcatcatttaagtgcggtgatttgttgtt 8496979  T
Q  130 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cgcaac 227  Q
    || |||||||||||||||||||||||||| ||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| || |   |||||    
T  8496980 cgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatcgattcttcaatcaaagatttgggcggcaac 8497079  T
Q  228 gttgcagattcaga-gtcatgtgtattccggtcactttaattt 269  Q
    ||||||||| | || |  |||  ||||||||||||||||||||    
T  8497080 gttgcagatcctgatgcaatggatattccggtcactttaattt 8497122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 272
Target Start/End: Original strand, 33110608 - 33110769
Alignment:
Q  114 gtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaa 213  Q
    ||||||||  |||||||  | |||||||||| ||||||||||||| ||| ||  |||||||||||||| ||||||||| ||||||||||| |||| | ||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatcgattattcaatcaa 33110707  T
Q  214 agaattt-gcg-caacgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||| ||| ||| ||||||||||||| | || ||||||  |||||||||||||||||||||||    
T  33110708 agattttggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttat 33110769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 10228595 - 10228837
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||| |||||||  |||||||||||||||||| |||| ||||| || | || |||||||||  ||||||| ||||   |||||| ||||  ||||||||    
T  10228595 tctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcg 10228693  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgt 229  Q
     | ||||||||||||||||||| |||||||| || ||| ||||||||||| |||  ||||||||||| |||| |||| | ||||| || | || ||||||    
T  10228694 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgt 10228793  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || | ||||  ||||||||| |||||||||||||    
T  10228794 tgcagatccggaggccatggatattccggtgactttaattttat 10228837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 7876206 - 7876030
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||| |   ||  ||||| |||||  ||||||||| |  |||||||    
T  7876206 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttc 7876108  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | ||||||||| ||||||||||||| || | ||  ||||||||||| || ||||||||| ||||||||||||||||    
T  7876107 gtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaattgattcatattaaaagatcgattgttca 7876030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 26588563 - 26588499
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  26588563 tcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 31296808 - 31296879
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||  |||||||||||||||||||||||||  | | ||||||| |||||||||| |||||||||||||    
T  31296808 gttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaa 31296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 33109750 - 33109824
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatc 108  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | |||||||||||  ||||||| |||||    
T  33109750 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttctttgtgatttcatcatc 33109824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 7976316 - 7976204
Alignment:
Q  87 ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattc 186  Q
    |||| ||| |||||||||| || ||||| | || || |||||||| | |||||||||||||| ||| |||   ||| |||||| ||||||| |||| |||    
T  7976316 tttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttcgtttagttc 7976217  T
Q  187 atattgaaagatc 199  Q
    ||||| |||||||    
T  7976216 atattaaaagatc 7976204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 34185784 - 34185720
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    ||||||| | |||||||||||||  ||| |||||| ||||||| |||| ||||||||||||||||    
T  34185784 tcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaaagatc 34185720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 30493492 - 30493595
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    ||||||| || || ||||| |||| || |||||||| | |||||||| |||||||||||||||   | |||||  ||||||| |||  ||||||||||||    
T  30493492 tgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaa 30493591  T
Q  196 gatc 199  Q
    ||||    
T  30493592 gatc 30493595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 31575637 - 31575530
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    ||||||||||||| || || |||| |  |||||||  | || |||||| |||||||||||||| ||| |||||||| ||||| | | |||| ||||||||    
T  31575637 tgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaaa 31575538  T
Q  196 gatcgatt 203  Q
     |||||||    
T  31575537 aatcgatt 31575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 1704260 - 1704163
Alignment:
Q  84 gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcattt 181  Q
    ||||||||||  | |||| ||| || |||||||||| || ||||||||  |||||||||  | || ||| ||||| ||| ||||||||||||||||||    
T  1704260 gttttttcttagtaattttgtcgtctgagtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttgttgcggtgttcattt 1704163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 8266551 - 8266588
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgattttt 70  Q
    |||||||||||||  |||||||||||||||||||||||    
T  8266551 tctttttctctctacttcaatctaaataagtgattttt 8266588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 30776656 - 30776689
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgattt 157  Q
    |||||||| |||||||||||||||||||||||||    
T  30776656 gttgttcgtcatcttgtgcggcgttgtttgattt 30776689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 11321546 - 11321494
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| ||| |||||| ||||||| |||| ||| ||||||||||||||    
T  11321546 gtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatcga 11321494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 24227809 - 24227757
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| ||| || |  |||||||||||||||||||||||||| |||||    
T  24227809 gtttgatttcacgtcttatcacggtgttcatttaattcatattgaaatatcga 24227757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 30894613 - 30894665
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| ||| |||  ||||||||| |||| ||||||||||||||||||    
T  30894613 gtttgatttcgcgtcttgccgcggtgttcgtttagttcatattgaaagatcga 30894665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 34489332 - 34489379
Alignment:
Q  224 caacgttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    ||||||||||||||| |||  ||| ||||||||||||||||||||||||    
T  34489332 caacgttgcagattc-gagatatgggtattccggtcactttaattttat 34489379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 46178490 - 46178723
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||  |||||||     
T  46178490 tctttttctctctaattcaatctaaataagtgctttttcacatagatctaggttttttcttcgtgatttcgtcttccgagtgtggtggtgtattgttcgt 46178589  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    |||||||||| | |||||||        |||||||||| |||||||||| ||||||||||||| || |||| |||| | ||||||||  ||| |||||||    
T  46178590 catcttgtgcagtgttgttt--------gtattgttgcagtgttcatttgattcatattgaaatattgattattcaatcaaagaattgggcgtcaacgtt 46178681  T
Q  231 gcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | ||| |||| |||||||||||||||| |||||||    
T  46178682 gcagatccggaggcatgggtattccggtcacttttattttat 46178723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 269
Target Start/End: Original strand, 37169145 - 37169381
Alignment:
Q  34 ctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||| | | |||||||||| ||||||||||| ||||||||| ||||  ||||| || |    
T  37169145 ctttttctctctaattcaatataaataagtgatttttcacatagatctagattttttcttcttgatttcgtcacccgagtgtgatggtctgttgtccgtc 37169244  T
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttg 231  Q
     |||||||| |||||||||||||| |||||||||||||||| |||||| |||||||| | |||||| ||| |||| |||||||||| | || ||||||||    
T  37169245 gtcttgtgcagcgttgtttgattttccgtattgttgcggtgctcatttgattcatatcg-aagatcaattattcaattaaagaattagacgtcaacgttg 37169343  T
Q  232 cagattcagagtcatgtgtattccggtcactttaattt 269  Q
    ||||| | |||  |||||||||||  ||| ||||||||    
T  37169344 cagatccggagatatgtgtattccaatcattttaattt 37169381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 46934556 - 46934797
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||| |||||||  |||||||||||||||||||||| |||||||||   |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  46934556 tctttctctctctatttcaatctaaataagtgatttt-cacatagatccaggttttttcttgttgatttcatcatctaagtgtggtggtttgttgttcgt 46934654  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | |||||||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| |||| | || || ||  ||| |||| ||    
T  46934655 cgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgggcgtcaacatt 46934754  T
Q  231 gcagattcagag-tcatgtgtattccggtcactttaattttat 272  Q
    |||||| | ||| |||||  |||||||||||||||||||||||    
T  46934755 gcagatccggagttcatggatattccggtcactttaattttat 46934797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 22802935 - 22803110
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||| | |||||| |||   || |||||||||  |||||||| |||  ||||||||     
T  22802935 tctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggttttctctatgtgctttcgtcatttgagtgtggcggtttgttgttcgt 22803034  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||| ||||    
T  22803035 cgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattca 22803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 25162350 - 25162591
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||  ||||||||| | |||||||| |||  ||||||| |||||  |||||||| ||  ||||||||    
T  25162350 tctttttctctctatttcaatctaaataagtgattt--cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtagtttgttgttcg 25162447  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacg 228  Q
     | |||||||||||||||||||||||||| | ||  ||||||||||||||  |||||||||||||||||||| |||| | |||| |||||  || |||||    
T  25162448 tcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatcgattattcaatcaaag-atttgaccgtcaacg 25162546  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| | || || |||  |||||||||||||||||||||||    
T  25162547 ttgcagatccggaggtaatggatattccggtcactttaattttat 25162591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 25631688 - 25631445
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  |||||||    
T  25631688 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 25631590  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
      | |||||||||||||||||| ||||||||| ||  |||||||||||||| ||| ||||||||||||||||| |||| | ||||| ||  ||| |||||    
T  25631589 tccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcaaagatttgggcgtcaacg 25631490  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||| |||| | || | ||||  |||||||||||||||||||||||    
T  25631489 ttgtagatccggatgccatggatattccggtcactttaattttat 25631445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 272
Target Start/End: Original strand, 31794047 - 31794225
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||| |||||| |||||| |||||| |||||||| | | ||||||||||||||||||||| |  | |||||||||||||||||| |||||||||||||    
T  31794047 tgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaa 31794146  T
Q  196 gatcgattgttcagttaaagaatttgcg---caacgttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| |||| | |||| ||||| |   ||||||||||||||| ||| |||| |||||||||||| |||||||||||    
T  31794147 gatcgattattcaatcaaag-atttgggcatcaacgttgcagattcggaggcatgagtattccggtcagtttaattttat 31794225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 272
Target Start/End: Complemental strand, 36734801 - 36734612
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||| |||||||||||||| | |||| ||||| |||||||| | ||||||||||||||||||||||| |||| || ||||||||||||||| ||    
T  36734801 ttttttcttcgtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgat 36734702  T
Q  185 tcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    ||||| ||||||||||||| || | | ||||| ||  ||| |||||||||||||   ||| |||| ||||| |||| |||||||||||||    
T  36734701 tcataatgaaagatcgattattgaatcaaagatttgggcgtcaacgttgcagatctggaggcatgagtatttcggttactttaattttat 36734612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 29503378 - 29503616
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||||| |  |||||||||||||| ||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |     
T  29503378 tttttctctatatttcaatctaaataattgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 29503476  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgc 232  Q
    |||||||||||| |||||||||| |||| || ||||||||||||| | |||||| ||| |||||||||| |||| | ||||| ||  ||| |||||||||    
T  29503477 tcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgttgc 29503575  T
Q  233 agattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||| | || | ||||  |||||||||||||||||||||||    
T  29503576 agatccggaggccatggatattccggtcactttaattttat 29503616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 35499362 - 35499184
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgt 128  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||    |||  | ||||| | |||  ||||||||| |  |||||    
T  35499362 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtaatttcattatctaagtgtggtgatttgttgt 35499264  T
Q  129 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  35499263 tcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatcgattgttca 35499184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 39917555 - 39917317
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||| |  ||||||| |||||  |||||||||||  ||||||||       
T  39917555 tttttctctctaattcaatctaaataagtgatttt-cacatagatctaggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgttg 39917457  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacgttg 231  Q
    |||||| || ||||||||||||| | || ||  |||||||||||||| ||||||||||||||||||||| |||| | |||| |||||  || ||||||||    
T  39917456 tcttgtacgacgttgtttgattttc-gtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaag-atttgaccgtcaacgttg 39917359  T
Q  232 cagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||| | || ||||||  |||||| ||||||||||||||||    
T  39917358 cagatccggaggtcatggatattccagtcactttaattttat 39917317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 36906035 - 36906210
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||||| |||||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  36906035 tctttttctctttatttcaatataaataagtgatttt-cacatagatttaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 36906133  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||||||||||||||||||||||||| ||  ||  |||||||||| ||||||||||||||||| ||||||||    
T  36906134 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaagatcaattgttca 36906210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 49552369 - 49552210
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||| ||| |||||  || | |||||||||||  ||||||| |||||  | |||||||||  |||||||| | |||||||||||||    
T  49552369 ttcaatctaaataagtgaattt-cacattaatctaggttttttctttgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgt 49552271  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||| ||| || ||||||||||||||| ||||| ||||||||||||||| ||||    
T  49552270 tgtttgatttctcgttttcttgcggtgttcattttattcacattgaaagatcgattattca 49552210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 32607396 - 32607557
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 145  Q
    |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | ||||||| |||    
T  32607396 ttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggc 32607494  T
Q  146 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||||||| |||||||||    
T  32607495 gttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagattgattgttca 32607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 272
Target Start/End: Original strand, 42719508 - 42719672
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagt 210  Q
    |||||||||||  |||||||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| |    
T  42719508 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaat 42719607  T
Q  211 taaagaatttgcg--caacgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
     ||||| |  | |  ||||||||||||||| || ||| ||  |||||||||||||||||||||||    
T  42719608 caaagattcggaggtcaacgttgcagattcggaggtcgtgaatattccggtcactttaattttat 42719672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 44907560 - 44907385
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  ||||||||||| |||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  44907560 tctttttctctttatttcaatctaaacaagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 44907462  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | ||||||||| |||||||||||||||  | ||  |||||||||||||||||||||||||||||||||||||||||    
T  44907461 gtcgtcttgtgcg-cgttgtttgatttcctatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttca 44907385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 30648860 - 30648705
Alignment:
Q  53 tctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtt 151  Q
    ||||||||||||| ||| ||||||||| | | |||||| |||  ||||||| |||||  |||||||||||  |||||||| | |||||||||| ||||||    
T  30648860 tctaaataagtgacttt-cacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtt 30648762  T
Q  152 tgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    || |||||| | || ||||||||||||||| ||||||||||||||||||||| ||||    
T  30648761 tgctttcccatcttcttgcggtgttcattttattcatattgaaagatcgattattca 30648705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 17237720 - 17237960
Alignment:
Q  37 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcat---gatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    |||||||||  |||||||||||||||||||||| ||||||||||| |||||||| ||| |   |||||| |||||  |||||||||||  |||||| | |    
T  17237720 tttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtc 17237818  T
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttg 231  Q
     ||||||||||||||||||||| ||  || ||   |||||||| |||| ||||||||| ||| ||||||| |||| | ||||| ||  ||| ||||||||    
T  17237819 gtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttg 17237918  T
Q  232 cagattcagagtc-atgtgtattccggtcactttaattttat 272  Q
    ||||| | ||| | |||  |||||||||||||||||||||||    
T  17237919 cagatccggaggctatggatattccggtcactttaattttat 17237960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 25849825 - 25849964
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgttgc 232  Q
    |||||||| ||||||||| ||||||||| || ||||||||||||||| ||||||||||||| ||||||| |||| ||||||| ||| ||| |||||||||    
T  25849825 tcttgtgcagcgttgttttatttcccgtcttcttgcggtgttcatttgattcatattgaaaaatcgattattcaattaaagattttagcgtcaacgttgc 25849924  T
Q  233 agattcagagtcatgtgtattccggtcactttaattttat 272  Q
    |||| | ||| ||||  |||||| |||||||||| |||||    
T  25849925 agatccggagacatgaatattccagtcactttaactttat 25849964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 12116113 - 12116186
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  12116113 tcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 12116186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 4178478 - 4178653
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| || ||| || | | |||||| |||  ||||||| |||||  |||||||||||  ||| |||     
T  4178478 tctttttctctctatttcaatctaaataagtgatttt-cagataaatctagctttttttctttgtgatttcatcatctaagtgtggtggtttgtttttca 4178576  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||||||||||||||| ||||||||| ||  |||||||||||||| ||| ||||||||||||| ||| ||||    
T  4178577 tcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatccattattca 4178653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 3849002 - 3848905
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||  |||||||| | ||||||||||||||||||| |||||| | || ||||||||||||||| |||| |||||||||||||||| ||||    
T  3849002 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaaagatcgattattca 3848905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 21488082 - 21488179
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||  |||||| | | |||||||||||||||||||||||||||| || |||||||||| |||| ||||||||||||| ||||||| ||||    
T  21488082 agtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattca 21488179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 38855198 - 38855022
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||   ||||||||||||||||| ||||||||||||| | |   |||||||||  ||||||| |||||  |||||| ||||  |||||||    
T  38855198 tctttttctctctatatcaatctaaataagtga-ttttcacatagatctagattttttttctttgtgatttcatcatctaagtgtgatggtttgttgttc 38855100  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |   ||||||| |||||||||| || ||||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  38855099 gttgtcttgtgtggcgttgtttcatctcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 38855022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 51202363 - 51202249
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||| | | |||||||||||||||||||||||||| |  |  |||||||||||||| ||    
T  51202363 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttcatttgat 51202264  T
Q  185 tcatattgaaagatc 199  Q
    |||||||||||||||    
T  51202263 tcatattgaaagatc 51202249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 38440738 - 38440567
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| | |||||||||||  ||||||| | |||  |||||||||||  ||||||||     
T  38440738 tctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttttctttttgatttcatgatcaaagtgtggtggtttgttgttcgt 38440640  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||| |  |||   |||||||||  ||| ||  |||  ||||||||| ||||||||||||||||||||| ||||    
T  38440639 cgtcttatatggc---gtttgatttttcgtcttcgtgcaatgttcatttgattcatattgaaagatcgattattca 38440567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 4172480 - 4172607
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttgg-ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| | || |||||||||  ||||||| |||||  |||||||||||  ||| ||||    
T  4172480 tctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcg 4172578  T
Q  132 acatcttgtgcggcgttgtttgatttccc 160  Q
     | |||||||||| ||||||| |||||||    
T  4172579 tcgtcttgtgcggtgttgtttcatttccc 4172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 4396463 - 4396362
Alignment:
Q  97 gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 196  Q
    ||||||||||||||| || |||| || |||||| | | ||||||| |||||||||||||||  ||  |||||||||||||| ||| ||||||||||||||    
T  4396463 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaag 4396364  T
Q  197 at 198  Q
    ||    
T  4396363 at 4396362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 14464529 - 14464598
Alignment:
Q  139 gtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||||| ||||||||| ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  14464529 gtgcggcgttgtttaatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 14464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 47980809 - 47980708
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  47980809 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47980710  T
Q  148 tg 149  Q
    ||    
T  47980709 tg 47980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 47990096 - 47989995
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  47990096 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47989997  T
Q  148 tg 149  Q
    ||    
T  47989996 tg 47989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 47999383 - 47999282
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  47999383 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47999284  T
Q  148 tg 149  Q
    ||    
T  47999283 tg 47999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 48008670 - 48008569
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  48008670 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 48008571  T
Q  148 tg 149  Q
    ||    
T  48008570 tg 48008569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 50611578 - 50611404
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||||||||| || |||||| | |||||||| |||  ||||||| |||||  |||||| ||||   |||||||    
T  50611578 tctttttctctatatttcaatctaaataagtgatttt-catatagatctaggtttttttctttgtgatttcatcatctaagtgtgatggtttattgttcg 50611480  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||| |||||||| |||| |||| ||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  50611479 tcgtcttatgcggcgt-gtttcattttccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 50611404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 2342405 - 2342528
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| |||||| || | |  |||||||||  ||||||| |||||  |||||||||||  ||| ||||    
T  2342405 tctttttctctctatttcaatctaaataagtgatttt-cacatatatctatatttttttctttgtgatttcatcatctaagtgtggtggtttgttattcg 2342503  T
Q  132 acatcttgtgcggcgttgtttgatt 156  Q
       ||| ||||||||||||||||||    
T  2342504 ttgtctagtgcggcgttgtttgatt 2342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 12947376 - 12947305
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||| | |||||||||||||||||||||||| | | |||||| ||||||| |||  ||||||||||||    
T  12947376 gttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaa 12947305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 46322460 - 46322356
Alignment:
Q  89 ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcat 188  Q
    |||||| |||||||||| |  ||| || ||| ||||||||||| | | |||| ||| |||||||| ||| |||| ||||||||||||||||||  |||||    
T  46322460 ttcttcgtgatttcgtcgt--gagcgtagtgttgcgttgttcgtcgttttgtacggtgttgtttgtttttccgtcttgttgcggtgttcatttggttcat 46322363  T
Q  189 attgaaa 195  Q
    |||||||    
T  46322362 attgaaa 46322356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 52496929 - 52496988
Alignment:
Q  140 tgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||| |||||||||||||| |||||||||| ||||||| ||| |||| ||||||||||||    
T  52496929 tgcgacgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatc 52496988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 29239292 - 29239404
Alignment:
Q  87 ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattc 186  Q
    |||| ||| ||||||| || || ||||| || | || |||||||| | |||||||||||| ||||||||||| ||| |||||| ||||||| |||  |||    
T  29239292 tttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttc 29239391  T
Q  187 atattgaaagatc 199  Q
     ||||| ||||||    
T  29239392 gtattggaagatc 29239404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 35175401 - 35175465
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||| |||||||||||||||  || |||||||||||||| |||  || |||||||||||||    
T  35175401 tcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatc 35175465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 29922015 - 29922118
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || |||||||| | || ||||||   | ||||||| | ||| |||||||||| ||| ||||||||||||  ||||  ||||||||||||    
T  29922015 tgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaa 29922114  T
Q  196 gatc 199  Q
    ||||    
T  29922115 gatc 29922118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 29971168 - 29971271
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || |||||||| | || ||||||   | ||||||| | ||| |||||||||| ||| ||||||||||||  ||||  ||||||||||||    
T  29971168 tgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaa 29971267  T
Q  196 gatc 199  Q
    ||||    
T  29971268 gatc 29971271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 20465047 - 20464993
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
    |||||||||  ||| |||| ||||||||||||||| || ||||||||||||||||    
T  20465047 gtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatt 20464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 44805029 - 44805087
Alignment:
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||||||||| ||||| ||| |||||||||||||| |||  | ||||||||||    
T  44805029 ttgtgcggcgttgtttaatttcacgtcttgttgcggtgttcgtttggtgcatattgaaa 44805087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 1649378 - 1649482
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || |||||||| | ||  ||||||  | |||||||||| |||||| |||||| ||| ||||||  |||||| |||| ||| ||||||||    
T  1649378 tgatttcgtcgtctgagtgtggcgttgtattgttctccgtcttgtgcggtgttgtt-gatttcgcgtcttgttgatgtgttcttttagttcctattgaaa 1649476  T
Q  196 gatcga 201  Q
    ||||||    
T  1649477 gatcga 1649482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 3850616 - 3850560
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 90  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||| | ||||||||    
T  3850616 tctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttt 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 54378816 - 54378956
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||||||   |||||||||||| ||||||||||||| |||| | |  |||||||||| |||||| |||| | |||||||||| || ||  |||| |     
T  54378816 tttttctctccatttcaatctaaatgagtgatttttcacgtaga-tctaattttttcttcgtgattttgtcacctgagtgtggtgatgtgtatttcgtcg 54378914  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgtt 176  Q
    |||||||||    ||||||||||  ||| || ||||||||||    
T  54378915 tcttgtgcgatcatgtttgatttgtcgtcttattgcggtgtt 54378956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 4821816 - 4821868
Alignment:
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||||  ||| |||||||||||||| |||  ||||||||||||||||    
T  4821816 ttgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatc 4821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 6910731 - 6910695
Alignment:
Q  172 gtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  6910731 gtgttcatttgattcatattgaaagatcgattattca 6910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 16235323 - 16235351
Alignment:
Q  48 ttcaatctaaataagtgatttttcacata 76  Q
    |||||||||||||||||||||||||||||    
T  16235323 ttcaatctaaataagtgatttttcacata 16235351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 33579891 - 33579943
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||  ||| |||| ||||||||| |||| ||||||||||||||||||    
T  33579891 gtttgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcga 33579943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 45424809 - 45424861
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||||||| |||||||||||||||||  |||| ||| |||||||| |||||    
T  45424809 gtttgatttcgcgtattgttgcggtgtttgtttagttcctattgaaaaatcga 45424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 8805789 - 8806028
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||||| |  |||||| ||||||||||||||| ||||| ||| | |||||||||||  ||||||| ||||| ||||||||||||  |||||||| |     
T  8805789 tttttctctttatttcaatttaaataagtgatttt-cacatggatctaggttttttctttgtgatttcatcatctgagtgtggtggtttgttgttcgtcg 8805887  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgttgc 232  Q
    ||||||||| |||||||||||||||||| ||  || ||||||||||| ||||||||||||||||||||| |||| | ||||| ||| ||| |||||||||    
T  8805888 tcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgc 8805987  T
Q  233 agattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| || ||||||  |||||||||||||||||||||||    
T  8805988 agattcggaggtcatggatattccggtcactttaattttat 8806028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 9986504 - 9986261
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttgg----ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||| |||||  |||||||||||||||||| ||||||||||||| | ||    |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  9986504 tttttatctctaattcaatctaaataagtga-ttttcacatagatctaggtttattttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 9986406  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
    | | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| ||||||| ||  ||| |||||    
T  9986405 gtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaattaaagatttgggcgtcaacg 9986306  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||||| || | |||| ||||||||||||||||||||||||    
T  9986305 ttgcagattcggaggccatgggtattccggtcactttaattttat 9986261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 17319246 - 17319482
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||| |||  |||||||||||||| |   ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||  |     
T  17319246 tttttctatctatttcaatctaaataacta--ttttcacatagatctaggttttttcttcatgatttcgtcatctgagtgtggtggtgtgttgttcttcg 17319343  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttg 231  Q
    |||||||| |||||| ||||||| |||| |||||||||||||||||| | |||||||| |||||||||| |||| | |||  ||||| |   ||||||||    
T  17319344 tcttgtgcagcgttg-ttgattttccgtcttgttgcggtgttcatttgactcatattg-aagatcgattattcaatcaaaagatttgagcgtcaacgttg 17319441  T
Q  232 cagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    ||||| |  |  |||| ||||||||||||||||||||||||    
T  17319442 cagatccgaaagcatgggtattccggtcactttaattttat 17319482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 2808627 - 2808391
Alignment:
Q  37 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatc 136  Q
    |||||||||  |||| ||||||||||||||||| ||||||||| | ||||||| |||  ||||||| |||||  |||||||||||  |||||||| | ||    
T  2808627 tttctctctatttcagtctaaataagtgatttt-cacatagatctaggttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 2808530  T
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgttgcag 234  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||||| |||| | ||||| ||| ||| |||||||||||    
T  2808529 ttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgcag 2808430  T
Q  235 attcag-agtcatgtgtattccggtcactttaattttat 272  Q
    || | | || ||||  ||||||| |||||||||||||||    
T  2808429 atccggaagccatggatattccgatcactttaattttat 2808391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 208
Target Start/End: Original strand, 22421659 - 22421830
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |||    
T  22421659 ttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcat 22421757  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||| |||| ||||||||||||||| | || ||||||||||||||| |||| |||||||||||||||| ||||    
T  22421758 cttgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattgaaagatcgattattca 22421830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 7015871 - 7015697
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||| |||||  |||||||||||  ||||||||     
T  7015871 tctttttctctttatttcaatctaaataattgatttt-cacatagatttaggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgt 7015773  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  7015772 cgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattca 7015697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 271
Target Start/End: Complemental strand, 3270374 - 3270149
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | |||||||| ||  ||||||| |||||  ||||||||||   |||||||| | | ||||| |||||    
T  3270374 ttcaatctaaataagtgatttt-cacatagatctaggttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgt 3270276  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtc 244  Q
    |||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | || |||    
T  3270275 tgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtc 3270176  T
Q  245 atgtgtattccggtcactttaatttta 271  Q
    |||  ||||||||||||||||||||||    
T  3270175 atggatattccggtcactttaatttta 3270149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 203
Target Start/End: Complemental strand, 459432 - 459265
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||||||  |||| | |||||||| |||||| ||||||||| | |||||||| |||| ||||||||||||| |||||| |||||| | |||||| |     
T  459432 ttttctctctatttcattttaaataagcgatttt-cacatagatataggtttttttcttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcg 459334  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
    |||||| || ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  459333 tcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatcgatt 459265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 34598908 - 34599082
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | | |||||| ||  ||||||| |||||  |||||||||||  |||||||      
T  34598908 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcat 34599006  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||||||||||||||||||| || | ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  34599007 cgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 34599082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 39642020 - 39641844
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  |||||| ||||||| ||||||| ||||||||| | ||||||||  |||| ||||||| ||||| || ||| |||||   ||||||    
T  39642020 tctttttctctctatttcaatttaaataaatgatttt-cacatagatctaggttttttttcttcgtgatttcatcatctgaatgttgtggtagtttgttc 39641922  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | ||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||||    
T  39641921 gtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattcatttaattcatattgaaagatcaattattca 39641844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 20047243 - 20047068
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| |||| |||||||||| |||||||| | |  ||||||| |||||  |||||||||||  ||||||||    
T  20047243 tctttttctctctttttcaatctaaataagtgactttt-acatagatttaggtttttttcattgtgatttcatcatctaagtgtggtggtttgttgttcg 20047145  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||||||||  || || || |||||||||||| |||| |||||||||||||||| ||||    
T  20047144 tcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatcgattattca 20047068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 27249312 - 27249137
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| |||  | |||||   |||  ||||||||| |  ||||||||    
T  27249312 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtaatttcaagatctaagtgtggtgatttgttgttcg 27249214  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  27249213 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 27249137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 6173552 - 6173794
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  6173552 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatcgaagtgtggtggtttgttgttcg 6173650  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
       ||||||| ||||||||||||||| || | ||  |||||||||||||| ||||||||||||||||||||  |||| | ||||| ||  ||| ||||||    
T  6173651 ttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatcgatcattcaatcaaagatttgggcgtcaacgt 6173750  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || | ||||  ||||||||| |||||||||||||    
T  6173751 tgcagatccggaggccatggatattccggtgactttaattttat 6173794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 4192759 - 4192999
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||||||||| |||||| |||| |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  4192759 tctttttctctatatttcaatctaaataagtgatttt-cacatatatttaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 4192857  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | ||||||| || ||||||||||||||||| || |||| |||||||| | |||||| ||| |||||||||| ||| || ||||| ||  ||| |||||||    
T  4192858 cgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttcatctgattcattttg-aagatcgattattccgtcaaagatttgagcgtcaacgtt 4192956  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | || | |||   |||||||||||||||||||||||    
T  4192957 gcagatccggaggccatagatattccggtcactttaattttat 4192999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 30420597 - 30420773
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  30420597 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 30420695  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | ||||||||||||||||||||||| |||| ||  |||||||||||||| |||||||||||||||| |||||||||    
T  30420696 gtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatagattgttca 30420773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 269
Target Start/End: Original strand, 36233925 - 36234167
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgt 128  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | ||||||    |||  | ||||| |||||  ||||||||| |   ||||    
T  36233925 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttttctttgtaatttcatcatctaagtgtggtgattttttgt 36234023  T
Q  129 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caa 226  Q
    ||| | |||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||| | ||||| ||  ||| |||    
T  36234024 tcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaa 36234123  T
Q  227 cgttgcagattcagagtc-atgtgtattccggtcactttaattt 269  Q
    |||||||||| | ||| | |||  ||||||||||||||||||||    
T  36234124 cgttgcagatccggaggcaatggatattccggtcactttaattt 36234167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 41430948 - 41431123
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggt-tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||| | |||| |||||||| | ||| ||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  41430948 tctttttctctatatttcaatctaaataagtcactttt-acatagatctaggtgtttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 41431046  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||||||| ||||    
T  41431047 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattca 41431123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 3725101 - 3725275
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| ||| |||||||||  ||||||| || ||  |||||||||||  ||||||||     
T  3725101 tctttttctctctatttcaatataaataagtgatttt-cacatagatcttgattttttctttgtgatttcatcgtctaagtgtggtggtttgttgttcgt 3725199  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
      |||||| ||||||||||||||||| ||| ||  || ||||||| ||| ||||||||||||||||||||| ||||    
T  3725200 tgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattgaaagatcgattattca 3725275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 200
Target Start/End: Complemental strand, 26025570 - 26025404
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  ||||||||||||||||| |||| ||||||||| | |||||||||||  ||||||| ||||   |||||||| ||  |||| |||     
T  26025570 tctttttctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcatgtaagtgtggtagtttgttggtcgt 26025472  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 200  Q
    | |||||||||||||||||||||||  ||| || ||||||||||||||| |||||| |||||||||||    
T  26025471 cgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatcg 26025404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 32913177 - 32913402
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||| ||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||||||     
T  32913177 ttcaatttaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgc 32913275  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtc 244  Q
    |||||||||| |||| || || |||||||||| | |||||||||| |||||||||| |||| | ||||| ||  ||| ||||||||||||| | || | |    
T  32913276 tgtttgattttccgtcttcttacggtgttcatctgattcatattg-aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcc 32913374  T
Q  245 atgtgtattccggtcactttaattttat 272  Q
    |||  |||| ||||||||||||||||||    
T  32913375 atggatattacggtcactttaattttat 32913402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 8308097 - 8308276
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||| |||||  ||||||||||||  |||||||| ||||||||| | |||||||||||| ||||||||||||| || ||||| |  | |||||||| |     
T  8308097 tttttttctctaattcaatctaaat--gtgatttt-cacatagatctaggttttttcttcgtgatttcgtcatctgactgtggcgc-gtgttgttcgtcg 8308192  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt 219  Q
    |||||||| |||||||||||||||  |||||||||| || ||||||| ||||||||||||||||||||| |||| | ||||||||    
T  8308193 tcttgtgcagcgttgtttgatttct-gtattgttgcagttttcatttgattcatattgaaagatcgattattcaatcaaagaatt 8308276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 272
Target Start/End: Complemental strand, 8971769 - 8971547
Alignment:
Q  51 aatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgt 150  Q
    ||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  ||| |||||||  |||||||| | |||||||| |||||||    
T  8971769 aatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcttgtgcagcgttgt 8971671  T
Q  151 ttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cgcaacgttgcagattcaga-gtcatg 247  Q
    |||||||||| | ||  |||| ||||||||| ||||||| ||||||||| |||  ||| ||||||| || |    ||||||||||||| |||| |||||     
T  8971670 ttgatttcccatcttcgtgcgatgttcatttgattcataatgaaagatcaatt-atcaattaaagatttggatgtcaacgttgcagatccagatgtcatt 8971572  T
Q  248 tgtattccggtcactttaattttat 272  Q
      |||||||||||||||||||||||    
T  8971571 gatattccggtcactttaattttat 8971547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 271
Target Start/End: Complemental strand, 3269251 - 3269031
Alignment:
Q  55 taaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 152  Q
    ||||||||||||||| ||||||||| | |||||||| ||  ||  ||||| |||||  ||||||||||   |||||||| | | ||||| ||||||||||    
T  3269251 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269153  T
Q  153 gatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtcatgtg 249  Q
    ||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | || ||||||      
T  3269152 gattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatgga 3269053  T
Q  250 tattccggtcactttaatttta 271  Q
    ||||||||||||||||||||||    
T  3269052 tattccggtcactttaatttta 3269031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 271
Target Start/End: Complemental strand, 3269810 - 3269590
Alignment:
Q  55 taaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 152  Q
    ||||||||||||||| ||||||||| | |||||||| ||  ||  ||||| |||||  ||||||||||   |||||||| | | ||||| ||||||||||    
T  3269810 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269712  T
Q  153 gatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtcatgtg 249  Q
    ||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | || ||||||      
T  3269711 gattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatgga 3269612  T
Q  250 tattccggtcactttaatttta 271  Q
    ||||||||||||||||||||||    
T  3269611 tattccggtcactttaatttta 3269590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 27949358 - 27949588
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttc-at---gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcg 143  Q
    |||||||||||||||||||||| ||||||||| | |||||||| ||| ||   |||||| |||||  |||||||||||   ||||||| | |||||| ||    
T  27949358 ttcaatctaaataagtgatttt-cacatagatctaggtttttttttctattgcgatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacg 27949456  T
Q  144 gcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga 241  Q
    ||||||||||||||||||| || ||||| ||||||||| |||||||| |||||||| ||| |||| | ||||| ||  ||| ||||||||||||| || |    
T  27949457 gcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaagatcaattattcaatcaaagatttgggcgtcaacgttgcagatccaaa 27949556  T
Q  242 -gtcatgtgtattccggtcactttaattttat 272  Q
     | ||||  |||||| ||||||||||||||||    
T  27949557 ggccatggatattccagtcactttaattttat 27949588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 40660077 - 40659918
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  ||||||||| |  |||||||| | |||||||||||||    
T  40660077 ttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtggtgctttgttgttcgtcgtcttgtgcggcgt 40659979  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||||||| ||  | || || |||||| |||| || ||||||||||||| ||||    
T  40659978 tgtttgatttcccgtcttcgtccgatgctcatttgattcttactgaaagatcgattattca 40659918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 45128124 - 45128299
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  45128124 tctttttctctttatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 45128222  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||| |||| | | || ||||||||||||||| |||| |||||||| ||| ||| ||||    
T  45128223 tcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttcattttattcctattgaaatatcaattattca 45128299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 9374664 - 9374529
Alignment:
Q  86 tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaatt 185  Q
    ||||||||| |||||||||||||  | |||||||||| |||||||| ||||||||||| | ||||||| ||| |||| |||||| ||||||||||| |||    
T  9374664 tttttcttcgtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttgttgtggtgttcatttgatt 9374565  T
Q  186 catattgaaagatcgattgttcagttaaagaatttg 221  Q
    ||| |||||||| ||||| |||| | ||||| ||||    
T  9374564 cattttgaaagaacgattattcaatcaaagattttg 9374529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 31580686 - 31580580
Alignment:
Q  97 gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 196  Q
    |||||| |||||  |||||||||||  |||||||| | |||||||||||||||||| ||||||||||||  |||||||||||||| ||| ||||||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaag 31580587  T
Q  197 atcgatt 203  Q
    |||||||    
T  31580586 atcgatt 31580580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 272
Target Start/End: Original strand, 25086991 - 25087199
Alignment:
Q  67 ttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattg 166  Q
    ||||||||||||| | |||||||| ||  ||||||| |||||  |||||||||||  |||||||| | ||||||||| ||||||||| |||||| | ||     
T  25086991 ttttcacatagatctaggttttttatttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgctttcccttcttc 25087090  T
Q  167 ttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcag-agtcatgtgtattccggtcactt 263  Q
    |||| ||||||| || ||||||||| ||||||||||| |||| | || || || | || ||||||||||||||||| || ||||  |||||| |||||||    
T  25087091 ttgcagtgttcaatttattcatattaaaagatcgattattcaatcaatgatttggacgtcaacgttgcagattcagaagccatggatattccagtcactt 25087190  T
Q  264 taattttat 272  Q
    |||| ||||    
T  25087191 taatcttat 25087199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 272
Target Start/End: Complemental strand, 37614209 - 37614045
Alignment:
Q  110 gagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcag 209  Q
    |||||||||| || |||||||  | ||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||| ||||     
T  37614209 gagtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagattgattattcaa 37614110  T
Q  210 ttaaaga-atttgcg-caacgttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    | ||| |  |||| | |||||||||||||   ||| |||| |||||||  |||||||||||||||    
T  37614109 tcaaatatttttgtgtcaacgttgcagatcgggagacatgagtattccaatcactttaattttat 37614045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 32197955 - 32197798
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||| ||||||| ||||||||  |||| |||| |||||||||||  |||||||||||||  |||||||| ||| ||||  |      
T  32197955 tctttttctctttatttcaatataaataaatgatttttg-cataaatttaggttttttctttgtgatttcgtcatctaagtgtggtagtgtgttgcccat 32197857  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatatt 191  Q
    | ||||| ||||| ||||||||||||| || |||||||||||||||||| |||||||||    
T  32197856 cgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttcatttgattcatatt 32197798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 40626189 - 40626066
Alignment:
Q  32 gtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||||||  ||||||||||||||| |||||| ||||||||| |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  40626189 gtctttttctctctatttcaatctaaataagggatttt-cacatagatctacgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 40626091  T
Q  132 acatcttgtgcggcgttgtttgatt 156  Q
     | |||||||||| |||||||||||    
T  40626090 tcgtcttgtgcggtgttgtttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 21570569 - 21570394
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | |   |||||| ||  ||||||| |||||  |||||||||||  |||||||    
T  21570569 tctttttctctatatttcaatctaaataagtga-ttttcacatagatctagattttttttttttgtgatttcatcatctaagtgtggtggtttgttgttc 21570471  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | | ||||||| | ||||||||  |||||||| || | ||||||||||||| |||||||||| |||||||||| ||||    
T  21570470 gtcgtcttgtgtgacgttgtttagtttcccgtcttctcgcggtgttcatttgattcatattg-aagatcgattattca 21570394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 4228105 - 4228207
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||  ||||||| |||||  |||||| ||||  |||||||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||    
T  4228105 ttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgat 4228204  T
Q  185 tca 187  Q
    |||    
T  4228205 tca 4228207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 24587680 - 24587790
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    ||||||||||||||||||||  || ||||| ||   || | | |||| | |||||||  |||||| |||||||| ||||||||||||||||||||||| |    
T  24587680 ttttttcttcatgatttcgttgtctgagtgcggcaatgtgatattcgtcgtcttgtgtagcgttgattgatttctcgtattgttgcggtgttcatttagt 24587779  T
Q  185 tcatattgaaa 195  Q
    |||||||||||    
T  24587780 tcatattgaaa 24587790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 29574759 - 29574657
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| |||||||| || | || |||||||| | ||||||||||| |||||||||||| | | ||||||| |||||  ||| |||||||||||||    
T  29574759 tgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaa 29574660  T
Q  196 gat 198  Q
    |||    
T  29574659 gat 29574657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 27477075 - 27477243
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| | | |||||||||  ||||||| |||||      |||||||  |||||| |     
T  27477075 tctttttctctatatttcaatctaaataagtaatttt-cacatagatctagattttttctttgtgatttcatcatc------tggtggtttgttgtttgt 27477167  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgtt-gcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
      |||||||||||| |||||||||| |||| || || ||||||||||||| |||||||||| |||||||||| ||||    
T  27477168 agtcttgtgcggcgctgtttgattttccgtcttctttgcggtgttcatttgattcatattg-aagatcgattattca 27477243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 84227 - 84100
Alignment:
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcaga-gt 243  Q
    |||||||||||||||| ||  |||||||||||||| ||||||||||||| ||||||| |||| | ||||| || | || ||||||||||||| | || ||    
T  84227 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa-atcgattattcaatcaaagatttggacgtcaacgttgcagatccggatgt 84129  T
Q  244 catgtgtattccggtcactttaattttat 272  Q
    ||||  |||||||| ||||||||||||||    
T  84128 catggatattccggccactttaattttat 84100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 12648036 - 12647970
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttc 177  Q
    |||| |||| || |||||||| | |||||||||||||||||||||||| ||| ||||||||||||||    
T  12648036 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttc 12647970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 4264444 - 4264544
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || ||||| | || ||||||||||| | ||||||||||   ||||||||||| ||| || |||||||||||||||  ||| ||||||||    
T  4264444 tgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaa 4264540  T
Q  196 gatc 199  Q
    ||||    
T  4264541 gatc 4264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 32679169 - 32679096
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||| ||||||||||| ||||| || || ||||| ||||||||| |||| |||||||||||||||| ||||    
T  32679169 tcttgtgtggcgttgtttgctttcctgtcttcttgcgatgttcattttattcttattgaaagatcgattattca 32679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 10248083 - 10248211
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||| |||||||||| | | |||||| | ||||||| |||| ||| ||||||||| |||||||| |||| |||||| | | |||| |  |||||    
T  10248083 ttcaatctaattaagtgatttct-atatagatctaggttttt-cttcgtgacttcgtcatctgagtgtggcggtgtgttgtttgccgtcttatatggcgt 10248180  T
Q  148 tgtttgatttcccgtattgttgcggtgttca 178  Q
    | ||| ||||||||| || ||||||||||||    
T  10248181 ttttttatttcccgttttattgcggtgttca 10248211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 43397247 - 43397146
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| ||  ||||||| | || |||||||| | ||||||| ||||||   ||||||| ||| |||| ||||||||| |||| ||||||||||||    
T  43397247 tgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaa 43397151  T
Q  196 gatcg 200  Q
    |||||    
T  43397150 gatcg 43397146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 28534057 - 28533984
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 197  Q
    |||||||| | ||||||||| ||||||||||||||   | |||||||||||||| ||| |||| ||||||||||    
T  28534057 gttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaaga 28533984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 31581880 - 31581812
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttc 102  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| | | |||||||||  |||||||    
T  31581880 tctttttctctctatttcaatctaaataagtga-ttttcacatagatctagtttttttctttttgatttc 31581812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 32680743 - 32680644
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttgg--ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||| | ||  |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  32680743 tctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 32680645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 18113891 - 18113951
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    ||||||||||||||||||||||| |||| || |||||||||| || |  ||||||||||||    
T  18113891 tcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaa 18113951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 198
Target Start/End: Original strand, 18694970 - 18695139
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacataga-------ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg 127  Q
    |||||||||||  ||||||||||||||||||||||| |||||||       ||||  |||||| || ||||||||||||   ||||| ||  |||  |||    
T  18694970 tttttctctctatttcaatctaaataagtgattttt-acatagatcacgatttttttttttttttttatgatttcgtcaattgagtgcggcagtgttttg 18695068  T
Q  128 ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
    |||| | ||||||||| | || |||||||| | || ||| || |||||||||||||||  |||||||||||    
T  18695069 ttcgtcgtcttgtgcgacattatttgattttcagttttgatgtggtgttcatttaatttctattgaaagat 18695139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 41712923 - 41712828
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttgg-ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||  || ||||||||||||||| ||||||||||||||| || ||||||||   ||||||| |||||  |||||||||||  ||||||||    
T  41712923 ttttctctctattttaatctaaataagtga-ttttcacatagatttaggtttttttctctgtgatttcctcatctaagtgtggtggtttgttgttcg 41712828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 38293521 - 38293644
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||| ||||||| || | ||||||  ||| |  |||||||| | ||||||| | ||||||||||| |||||| || ||||  |||||||||  |    
T  38293521 ttttttcttcgtgatttcttcgtacgagtgcagtgttatgttgttcgtcgtcttgtgtgacgttgtttgatatcccgtcttattgcaatgttcatttggt 38293620  T
Q  185 tcatattgaaagatcgattgttca 208  Q
    | ||||| |||||| |||||||||    
T  38293621 ttatattaaaagattgattgttca 38293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 23903416 - 23903478
Alignment:
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    ||||||||||||||||||| ||  |  |||||| ||| ||||||| |||||||||||||||||    
T  23903416 ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaagatc 23903478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 37994237 - 37994347
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||| ||||| |||||||||  || ||||| || | || |||||||| | || ||| |||| |||||||||||  | | ||||||| |||||||||| ||    
T  37994237 ttttatcttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgat 37994336  T
Q  185 tcatattgaaa 195  Q
    |||||||||||    
T  37994337 tcatattgaaa 37994347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 10929624 - 10929733
Alignment:
Q  87 ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt-gatttcccgtattgttgcggtgttcatttaatt 185  Q
    |||| ||| |||||||||| || ||||| |||| || |||||||| | |||||| || |||||||| |||||  ||| |||||||||||||| |||  ||    
T  10929624 tttttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggtt 10929723  T
Q  186 catattgaaa 195  Q
    ||| ||||||    
T  10929724 catgttgaaa 10929733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 41327510 - 41327575
Alignment:
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||| || || |||||||||||| |||||||||||||||||| |||  ||  ||||||||||||    
T  41327510 atcttgcgctgcattgtttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatc 41327575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 17261588 - 17261631
Alignment:
Q  164 ttgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  17261588 ttgttgcggtgttaatt-aattcatattgaaagatcgattattca 17261631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 36323799 - 36323850
Alignment:
Q  53 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtc 105  Q
    ||||||||||||||||| ||||||||||| ||||||||||   ||||||||||    
T  36323799 tctaaataagtgatttt-cacatagatttaggttttttctctgtgatttcgtc 36323850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 6e-46; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 15570828 - 15571067
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||  ||||||||||||||||| | |||||||||||  ||||||||||| ||||||||||||||| ||||||||     
T  15570828 tctttttctctataattcaatctaaatatttgatttttcacatagatgtaggttttttctttgtgatttcgtcacccgagtgtggtggtgtgttgttcgt 15570927  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgtt 230  Q
    | |||| ||||| ||||||||| ||||| |||||||| ||||||||||| |||||||||| |||||| ||| |||| | ||| |||| | ||  ||||||    
T  15570928 cgtcttatgcggtgttgtttga-ttcccatattgttgtggtgttcatttgattcatattg-aagatctattattcaatcaaataattggacgttaacgtt 15571025  T
Q  231 gcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    ||| || | |||||||||||||||| ||||||||||||||||    
T  15571026 gcacatccggagtcatgtgtattccagtcactttaattttat 15571067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 2057999 - 2057757
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| ||| |||||||| |||||  |||||||||||  ||||||||    
T  2057999 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttatgatttcatcatctaagtgtggtggtttgttgttcg 2057901  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 229  Q
     | ||||| |||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||    
T  2057900 tcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgt 2057801  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| |||| | ||||  ||||||||||||| |||||||||    
T  2057800 tgcagatccagatgccatggatattccggtcactataattttat 2057757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 236
Target Start/End: Original strand, 42886401 - 42886600
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  ||||||| ||||||||| |||| ||||||||||| ||||||| |||| ||||||| ||||| ||||||||||||| |||||||| | |    
T  42886401 ttttctctctatttcaatcaaaataagtgctttt-cacatagatttaggttttt-cttcgtgatttcatcatctgagtgtggtggtgtgttgttcgtcgt 42886498  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacgttgcag 234  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||| ||||||||||| |||| | ||||| ||  || |||||||||||    
T  42886499 cttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatcgattattcaatcaaagatttgacgtcaacgttgcag 42886598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 7613214 - 7613044
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  ||||||||||||||||| ||||||| |||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| | |    
T  7613214 ttttctctctgtttcaatctaaataagtg-tttttcatatagatctaggttttt-cttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgt 7613117  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||   ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  7613116 cttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatcgattattca 7613044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 27267019 - 27266778
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  ||||||||     
T  27267019 tttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 27266921  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacgt 229  Q
    | |||||||||||  ||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | |||| |||||  || ||||||    
T  27266920 cgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaag-atttgaccgtcaacgt 27266822  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || ||||||  |||||||||||||||||||||||    
T  27266821 tgcagatccggaggtcatggatattccggtcactttaattttat 27266778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 30371643 - 30371819
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  30371643 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 30371741  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||    
T  30371742 gtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttca 30371819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 19259974 - 19259731
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |  |||||||  ||   ||||||| |||||  |||||||||||  |||||||    
T  19259974 tctttttctctctatttcaatctaaataagtgatttttcacatagatctaagttttttttctctgtgatttcatcatctaagtgtggtggtttgttgttc 19259875  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 228  Q
    | | |||||||||| ||||||||||| ||||| ||  ||||||||| |||| ||||||||||||||||||||| |||| | ||||| ||  ||| |||||    
T  19259874 gtcgtcttgtgcggtgttgtttgatt-cccgtcttcgtgcggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacg 19259776  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| || | | ||||  |||||||||||||||||||||||    
T  19259775 ttgcagatccaaaggccatggatattccggtcactttaattttat 19259731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 27576507 - 27576336
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 135  Q
    ||||||||||  |||||| |||||||||||| || ||||||||| | | |||||||||  ||||||||||||  ||||||||||||  |||||||  |      
T  27576507 ttttctctctatttcaatgtaaataagtgatatt-cacatagatctagattttttctttgtgatttcgtcatatgagtgtggtggtatgttgttcttcta 27576409  T
Q  136 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||    
T  27576408 cttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatcgattattca 27576336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 21060442 - 21060202
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||||||| |||| || |||||  |||||||||||  ||||||||     
T  21060442 tctttttctctatatttcaatctaaataagtgatttt-cacatagatgtaggttttttcttcgtgatgtcatcatctaagtgtggtggtttgttgttcgt 21060344  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 230  Q
    | |||||||||||  | ||||||||||||| || |||| |||||||| |||||||| ||| |||||||||| |||| | ||||| ||  ||| |||||||    
T  21060343 cgtcttgtgcggcactttttgatttcccgtcttcttgcagtgttcatctaattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgtt 21060245  T
Q  231 gcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| | || | ||||  |||||||||||||||||||||||    
T  21060244 gcagatccggaggccatggatattccggtcactttaattttat 21060202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 30298142 - 30298287
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||| |||||||| |||||  |||||||||||  |||||||| | ||||||||||||     
T  30298142 ttcaatctaaataagtgatttt-cacatagatctaggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgc 30298240  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 194  Q
    |||||||||| |||| || |||||||||| |||| ||||||||||||    
T  30298241 tgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 30298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 16981211 - 16981450
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    |||||||||||  |||||||||||||||||||||  |||||| || | |||||||||||  ||||||| |||||  |||| ||||||  |||||||| |     
T  16981211 tttttctctctatttcaatctaaataagtgattta-cacatatatctaggttttttctttgtgatttcatcatctaagtgcggtggtttgttgttcgtcg 16981309  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgc 232  Q
    ||||||||||| |||||| |||| |||| || ||||||||||| ||| ||||||||||||||||||||| |||| | ||||| ||  ||| || ||||||    
T  16981310 tcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcatcgttgc 16981409  T
Q  233 agattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||| | || ||||||  ||||||||| |||||||||||||    
T  16981410 agatccggaggtcatggatattccggtgactttaattttat 16981450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 18677627 - 18677384
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 130  Q
    |||||||||||||  || ||||||||||||||||||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  |||||||    
T  18677627 tctttttctctctattttaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 18677529  T
Q  131 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacg 228  Q
    | | ||||||| | ||||||||||||| |||| ||  | |||||||||||| ||||||||||||||||||||| || | | ||| ||||| ||| ||||     
T  18677528 gtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatcgattatttaatcaaataatttggcgtcaaca 18677429  T
Q  229 ttgcagattcagag-tcatgtgtattccggtcactttaattttat 272  Q
    |||||||| | |||  ||||  |||||||||||||||||||||||    
T  18677428 ttgcagatccggagaccatggatattccggtcactttaattttat 18677384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 20257855 - 20257615
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||||| |||| | |||| ||||||||  | | ||||||||    
T  20257855 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttcttcattattttgccatctgagtgtggcagcgtgttgttcg 20257757  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacg 228  Q
     | ||||||||| | || || ||||| |||| |||||||||||||||||| ||||||||||||  ||||||| |||| | |||| |||||||   |||||    
T  20257756 tcgtcttgtgcgacattatt-gattttccgtcttgttgcggtgttcatttgattcatattgaagtatcgattattcaatcaaag-atttgcgcgtcaacg 20257659  T
Q  229 ttgcagattcagagtcatgtgtattccggtcactttaattttat 272  Q
    ||| |||| | ||  | || ||||||||||||||||||||||||    
T  20257658 ttgtagatccggaaacgtgggtattccggtcactttaattttat 20257615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 35475482 - 35475257
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| ||||    ||||||||||  |||||||| | | || |||||||     
T  35475482 ttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgc 35475384  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcag-agtc 244  Q
    ||||||||||| ||| || ||||||||||||||| ||||||||| ||||||||||| |||| | ||||| ||  ||| ||||||||||||||||| || |    
T  35475383 tgtttgatttctcgtcttcttgcggtgttcatttgattcatatt-aaagatcgattattcaatcaaagatttgggcgtcaacgttgcagattcagaagcc 35475285  T
Q  245 atgtgtattccggtcactttaattttat 272  Q
    |||  |||||| ||||||||||||||||    
T  35475284 atggatattccagtcactttaattttat 35475257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 198
Target Start/End: Complemental strand, 36344650 - 36344487
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||| ||| |  ||||||||||  ||||||  |||||  |||||||||||  ||||||||     
T  36344650 tctttttctctatatttcaatctaaataagttatttt-cacatggatctaagttttttctttgtgattta-tcatctaagtgtggtggtttgttgttcgt 36344553  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
    | ||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||    
T  36344552 cgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 7150496 - 7150321
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| |  ||||||| |||  || |||| |||||  |||||||||||  ||||||||    
T  7150496 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaagtttttttctttgtgctttcatcatctaagtgtggtggtttgttgttcg 7150398  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||| ||| ||||    
T  7150397 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcccattgaaagatcaattattca 7150321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 272
Target Start/End: Complemental strand, 41184555 - 41184359
Alignment:
Q  79 ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttca 178  Q
    |||| ||||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||||||||||||||||| ||  || |||||||     
T  41184555 tttttgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcg 41184456  T
Q  179 tttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | || | ||||  |||||| ||||||||||||||||    
T  41184455 tttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttat 41184359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 19281105 - 19280931
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    |||||||||||||  |||||||||||||||||| ||| |||| | || | |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  19281105 tctttttctctctatttcaatctaaataagtgacttt-cacacatatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 19281007  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||||||| |||||||||| ||| || | || |||| |||||||||| |||| |||||||||||||||| ||||    
T  19281006 cgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattgaaagatcgattattca 19280931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 34881688 - 34881811
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||    
T  34881688 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgat 34881787  T
Q  185 tcatattgaaagatcgattgttca 208  Q
    ||||||||||||||| ||| ||||    
T  34881788 tcatattgaaagatcaattattca 34881811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 208
Target Start/End: Original strand, 43148652 - 43148824
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 134  Q
    ||||||||||  ||| |||||||||||||| ||| |||||| |||| | |||||| |||  ||||||| |||||  |||||||||||  |||||||| |     
T  43148652 ttttctctctatttcgatctaaataagtgacttt-cacatatatttagatttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 43148750  T
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||| |||||||| |||||||| || ||||| ||||||||| |||| |||||||||||||||| ||||    
T  43148751 tcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctattgaaagatcgattattca 43148824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 11767726 - 11767878
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||||||| |  |||||||||||||||||||||||||| ||||| | || |||||||||| |||| ||| |||| ||||||||||||| ||||||||    
T  11767726 tctttttctctatatttcaatctaaataagtgatttttcacgtagatatatgtttttttcttcgtgatgtcgccatctgagtgtggtggtgtgttgttcg 11767825  T
Q  132 acatcttgtgcggcgttgtttgatttcccgta-ttgttgcggtgttcatttaa 183  Q
     | |||||| ||  |||||||||||| ||||| || ||||||| |||||||||    
T  11767826 tcgtcttgtacgaagttgtttgattttccgtattttttgcggtattcatttaa 11767878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 26578168 - 26578345
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 129  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| ||| |    ||||| |||||  | ||| ||| |  ||||||    
T  26578168 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaaatgtagtgatttgttgtt 26578266  T
Q  130 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    || | ||||||||| |||||||||||||||||| ||  ||| |||||||||| ||||||||||||||||||||||||||    
T  26578267 cgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatcgattgttca 26578345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 203
Target Start/End: Original strand, 7246877 - 7247047
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  ||||||||| |  ||||||||    
T  7246877 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcg 7246975  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
     | |||||||||||||| |||  ||||| || || ||||||||||||||| |||| |||||| |||||||||    
T  7246976 tcgtcttgtgcggcgttattttttttcctgtcttcttgcggtgttcattttattcctattgatagatcgatt 7247047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 43261978 - 43261805
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||| |||||  |||||||||||||||||||||| ||||||||| | ||||||  |||  ||||||  |||||  |||||||||||  ||||||||     
T  43261978 tctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttc-ctttgtgattttatcatctaagtgtggtggtttgttgttcgt 43261881  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    | |||| ||||| |||||||||||| |||| || |||||||||| |||| ||||||||||||| ||||||| ||||    
T  43261880 cgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattca 43261805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 27751860 - 27752005
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||| ||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |  ||| || ||||     
T  27751860 ttcaatataaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgccttttggggcgc 27751958  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 194  Q
    | ||||||||||||| || ||||||||||||||| ||||||||||||    
T  27751959 tatttgatttcccgtcttcttgcggtgttcatttgattcatattgaa 27752005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 28235504 - 28235669
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||| |||  ||| |||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||| ||||  |||||  |     
T  28235504 tctttttctttctatttcgatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgtctgt 28235602  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    | ||||||||||||||||||||||| || | || ||||||||||||||| |||| ||||||||||||    
T  28235603 cgtcttgtgcggcgttgtttgattttccatcttcttgcggtgttcattttattcttattgaaagatc 28235669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 781308 - 781548
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||||||||| || |||||| | || ||||||||  ||||||| |||||  ||| |||||||  ||||||||     
T  781308 tctttttctctatatttcaatctaaataagtgatttt-cagatagatctagggtttttctttgtgatttcatcatctaagtatggtggtttgttgttcgt 781406  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 229  Q
    | || ||||||||  ||||||||||||||| || ||||||||||||| | |||||| ||| |||||| ||| |||| | ||| |||||| |   ||||||    
T  781407 cgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcaattattcaatcaaa-aatttgagcgtcaacgt 781504  T
Q  230 tgcagattcag-agtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | | || ||||  |||||||||||||||||||||||    
T  781505 tgcagatccggaagccatggatattccggtcactttaattttat 781548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 3271566 - 3271397
Alignment:
Q  36 ttttctctctcgttcaatctaaataagtgatttttcacatagat-------tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgt 128  Q
    ||||||||||  |||||||||||||||||||||| ||||||| |       ||| ||||||||||  ||||||| |||||  |||||||||||  ||| |    
T  3271566 ttttctctctgtttcaatctaaataagtgatttt-cacataggtctaatttttttgttttttctttgtgatttcatcatctaagtgtggtggtttgttat 3271468  T
Q  129 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    ||| | |||||||| |||||||||||||| |||| ||  |||||||||||||| |||||||||||||||||    
T  3271467 tcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3271397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 203
Target Start/End: Original strand, 7241701 - 7241871
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  | ||||||| |  ||||||||    
T  7241701 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaattgtggtgatttgttgttcg 7241799  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 203  Q
     | |||||||||||||| |||  ||||| || || ||||||||||||||| |||| |||||| |||||||||    
T  7241800 tcgtcttgtgcggcgttattttctttcctgtcttcttgcggtgttcattttattcctattgatagatcgatt 7241871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 42579801 - 42580048
Alignment:
Q  35 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--------cttcatgatttcgtcatccgagtgtggtggtgcgtt 126  Q
    ||||||| |||  |||||||||||||||||||||| ||||||||||| ||||||||        |||  ||||||| |||||  ||||||||| |  |||    
T  42579801 tttttctttctatttcaatctaaataagtgatttt-cacatagatttaggtttttttgttttttctttgtgatttcatcatctaagtgtggtgatttgtt 42579899  T
Q  127 gttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-c 224  Q
    ||||| | ||||||||| ||||||||||||| | || ||  ||| |||||||||| ||||||||| ||||||||||| |||| | ||||| ||  ||| |    
T  42579900 gttcgtcgtcttgtgcgacgttgtttgattttctgtcttcgtgcagtgttcattttattcatatttaaagatcgattattcaatcaaagatttgggcgtc 42579999  T
Q  225 aacgttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||||||| | || | ||||  |||||||||||||||||||||||    
T  42580000 aacgttgcagatccggaggccatgaatattccggtcactttaattttat 42580048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 4954012 - 4954152
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgc 232  Q
    ||||||||||||||||||  |||||||| || ||||||||||||||| |||| |||||||||||||||| |||| | ||||| || | || |||||||||    
T  4954012 tcttgtgcggcgttgttttctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgc 4954111  T
Q  233 agattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||| || | ||||  ||||||||| |||||||||||||    
T  4954112 agattcggaggccatgaatattccggtgactttaattttat 4954152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 272
Target Start/End: Complemental strand, 7887099 - 7886857
Alignment:
Q  32 gtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||||| ||||||  || ||||||||||||||||||| |||||| || |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  7887099 gtcttttcctctctattttaatctaaataagtgatttt-cacataaatctatgttttttctttttgatttcatcatctaagtgtggtggtttgttgttcg 7887001  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcgc---aacg 228  Q
     | |||||| |  | ||||||||||| |||| || ||||||||||  | | ||||||||| ||||||||||| |||| | ||||| |||| ||   ||||    
T  7887000 tcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatattaaaagatcgattattcaatcaaagattttg-gcattaacg 7886902  T
Q  229 ttgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    |||||||| | || ||||||  ||||||||||||| || ||||||    
T  7886901 ttgcagatccggaggtcatggatattccggtcactatagttttat 7886857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 10332639 - 10332576
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 198  Q
    ||||||||||| |||||||||||| ||| ||||||| |||||  ||| ||||||||||||||||    
T  10332639 tcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagat 10332576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 10649653 - 10649715
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattc 186  Q
    |||||||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||    
T  10649653 gttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattc 10649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 31802530 - 31802484
Alignment:
Q  135 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcattt 181  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  31802530 tcttgtgcggcgttgtttgatttccggtcatgttgcggtgttcattt 31802484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 19983499 - 19983368
Alignment:
Q  51 aatctaaataagtgatttttcacatagattttggttt--tttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgtt 148  Q
    |||||||||| ||||||||  |||||||||| || ||  ||||||  ||||||||||||  |||||||| | || |||||||| |  |||||||||||||    
T  19983499 aatctaaatacgtgattttg-acatagatttagggttattttctttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgtt 19983401  T
Q  149 gtttgatttcccgtattgttgcggtgttcattt 181  Q
    ||| | |||  ||| |||||| |||||||||||    
T  19983400 gttagttttttcgtcttgttgtggtgttcattt 19983368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 22978964 - 22978843
Alignment:
Q  153 gatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagtcatgtgt 250  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||   ||| || | | ||||| ||  ||| |||| |||||||||| ||| |||| ||    
T  22978964 gattttccgttttgttgcggtgttcatttgattcatattgaaagaaaaattattaaatcaaagatttgggcgtcaacattgcagattctgaggcatgggt 22978865  T
Q  251 attccggtcactttaattttat 272  Q
    ||| |||||||||| |||||||    
T  22978864 atttcggtcactttcattttat 22978843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 35631836 - 35631771
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtg 114  Q
    ||||||||||||||||||||||| ||||| || |  |||||||||||||| ||| ||| ||||||||    
T  35631836 ttcaatctaaataagtgattttt-acatatatctaagttttttcttcatggttttgtcgtccgagtg 35631771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 35921077 - 35921023
Alignment:
Q  145 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||||||| ||| ||||||||||||||||||  ||| |||| |||||||    
T  35921077 cgttgtttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaaagatc 35921023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 10649372 - 10649428
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 90  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||    
T  10649372 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 10649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 11768062 - 11768095
Alignment:
Q  175 ttcatttaattcatattgaaagatcgattgttca 208  Q
    ||||||||||||||||||||||||||||| ||||    
T  11768062 ttcatttaattcatattgaaagatcgattattca 11768095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 28097086 - 28097142
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggtt-ttttcttcatgatttcgt 104  Q
    |||||| ||||||||||| |||||||||| |||| |||| ||||||||||||||||||    
T  28097086 ttcaatataaataagtga-ttttcacataaatttaggttattttcttcatgatttcgt 28097142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 13421909 - 13421996
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    |||||| || || |||||||| | ||||||||||   | ||||||||| |||||||| |  ||||||||||| ||| ||||||||||||||    
T  13421909 agtgtgatgttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgtattgtcgttgtgttcatttagttcctattgaaagatcga 13421996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 208
Target Start/End: Original strand, 453871 - 454023
Alignment:
Q  55 taaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttga 154  Q
    ||||||||||||||| |||||| ||||  ||||||||||| ||||||||| ||  || |||| ||||| |||||||| | ||||| ||||||||||||||    
T  453871 taaataagtgatttt-cacatatatttacgttttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcgtcttgggcggcgttgtttga 453969  T
Q  155 tttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    ||| | || |||||||||||||||||| | ||||||||||||||||||| ||||    
T  453970 ttttcagtcttgttgcggtgttcatttgactcatattgaaagatcgattattca 454023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 201532 - 201359
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 132  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||| ||||  ||||||||     
T  201532 tctttttctctatatttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgt 201434  T
Q  133 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
      |||||||||||| ||||||||||| ||| || ||| ||||||||||| |||||||||| |||||||||| ||||    
T  201433 agtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattg-aagatcgattattca 201359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 271
Target Start/End: Complemental strand, 83544 - 83358
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 184  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||| |   |||||||||||||||||||||||| ||| ||  |||||| ||||||| ||    
T  83544 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttg---tcttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgat 83448  T
Q  185 tcatattgaaagatcgattgttcagttaaagaatttgc--gcaacgttgcagattcaga-gtcatgtgtattccggtcactttaatttta 271  Q
    ||||||||||||||||||| |||| |  |||| || ||   |||||||||||||||||| ||||||  | ||||||||||||||||||||    
T  83447 tcatattgaaagatcgattattcaatcgaagatttggccgtcaacgttgcagattcagaggtcatggattttccggtcactttaatttta 83358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 16479 - 16239
Alignment:
Q  37 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcat---gatttcgtcatccgagtgtggtggtgcgttgttcgac 133  Q
    |||||||||  |||||||||||||||||||||| ||||||||||| |||||||| ||| |   |||||| |||||  |||||||||||  |||||| | |    
T  16479 tttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtc 16381  T
Q  134 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttg 231  Q
     ||||||||||||||||||||| ||  || ||   |||||||| |||| ||||||||| ||| ||||||| |||| | ||||| ||  ||| ||||||||    
T  16380 gtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttg 16281  T
Q  232 cagattcagagtc-atgtgtattccggtcactttaattttat 272  Q
    ||||| | ||| | |||  |||||||||||||||||||||||    
T  16280 cagatccggaggctatggatattccggtcactttaattttat 16239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 6299 - 6396
Alignment:
Q  111 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 208  Q
    |||||||||||  |||||||| | |||||| |||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  6299 agtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattca 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 272
Target Start/End: Original strand, 5314 - 5556
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 131  Q
    ||||| |||||||  |||||||||||||||||| |||| ||||| || | || |||||||||  ||||||| ||||   |||||| ||||  ||||||||    
T  5314 tctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcg 5412  T
Q  132 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgt 229  Q
     | ||||||||||||||||||| |||||||| || ||| ||||||||||| |||  ||||||||||| |||| |||| | ||||| || | || ||||||    
T  5413 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgt 5512  T
Q  230 tgcagattcaga-gtcatgtgtattccggtcactttaattttat 272  Q
    ||||||| | || | ||||  ||||||||| |||||||||||||    
T  5513 tgcagatccggaggccatggatattccggtgactttaattttat 5556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 20537 - 20402
Alignment:
Q  51 aatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgt 150  Q
    ||||||||||||||||||| || |||||||| | |||||| || | |||||| |||||  |||||||||||  |||||||| | ||||||||| ||||||    
T  20537 aatctaaataagtgatttt-catatagatttggctttttttttta-gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgt 20440  T
Q  151 ttgatttcccgtattgttgcggtgttcatttaattcat 188  Q
    ||||||| |||| || ||||||||||||||| ||||||    
T  20439 ttgattttccgttttcttgcggtgttcatttgattcat 20402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 6017 - 6088
Alignment:
Q  124 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  6017 gttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 361942 - 361807
Alignment:
Q  48 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 147  Q
    |||||||||||||||| ||||| |||||||| || |||||||| |   ||||||| ||||   ||| |||||||  |||||||| | |||||||||||||    
T  361942 ttcaatctaaataagtaatttt-cacatagagttaggttttttttg--tgatttcatcatttaagtatggtggtttgttgttcgtcgtcttgtgcggcgt 361846  T
Q  148 tgtttgatttcccgtattgttgcggtgttcatttaattc 186  Q
    |||||||||||| || ||| ||| |||||||||| ||||    
T  361845 tgtttgatttcctgtcttggtgcagtgttcatttgattc 361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 8636 - 8723
Alignment:
Q  33 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggt 121  Q
    ||||||| |||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||    
T  8636 tctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggt 8723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 8745 - 8849
Alignment:
Q  171 ggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagag-tcatgtgtattccggtcactttaat 267  Q
    ||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | |||  ||||  ||||| ||||||||||||    
T  8745 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcactttaat 8844  T
Q  268 tttat 272  Q
    |||||    
T  8845 tttat 8849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 10140 - 10067
Alignment:
Q  125 ttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 201  Q
    ||||||| | ||||||||||||||   ||||||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  10140 ttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatcga 10067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 34827 - 34775
Alignment:
Q  147 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    |||||||||||| ||| ||||||| | |||||||| |||||||||||||||||    
T  34827 ttgtttgatttctcgttttgttgcagggttcatttgattcatattgaaagatc 34775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 92626 - 92523
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||| || ||||||| || || |||| ||  | |||||||||  ||||||||||||| ||| |||||| ||||||| |||  ||||||||||||    
T  92626 tgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaa 92527  T
Q  196 gatc 199  Q
    ||||    
T  92526 gatc 92523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 15453 - 15554
Alignment:
Q  96 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 195  Q
    |||||||||||||  |||| |||| || |||||||| | |||||||||||||  ||||||||| ||| |||| ||||||||  || | ||| ||||||||    
T  15453 tgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaa 15550  T
Q  196 gatc 199  Q
    ||||    
T  15551 gatc 15554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 93054 - 93170
Alignment:
Q  85 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgat-ttcccgtattgttgcggtgttcatttaa 183  Q
    ||||||| ||||||||||||| || |||||  | | || |||||| |   ||||||||||||||||||||| |||  || |||||| ||||||| |||      
T  93054 ttttttcctcatgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttgg 93153  T
Q  184 ttcatattgaaagatcg 200  Q
    |||||||||||||||||    
T  93154 ttcatattgaaagatcg 93170  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 1356 - 1407
Alignment:
Q  149 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 200  Q
    |||||||||| ||| |||||||||||||| |||| ||| |||||||||||||    
T  1356 gtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcg 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 9677 - 9615
Alignment:
Q  137 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 199  Q
    ||||||||||||||||||| ||  |  |||||| ||| ||||||| |||||||||||||||||    
T  9677 ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaagatc 9615  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 36797 - 36683
Alignment:
Q  84 gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaa 183  Q
    |||||||||||||||||| ||  |  ||||||  || || |||||||| | |||||||||| |||||||||||||   | |||||| |||| | ||||      
T  36797 gttttttcttcatgatttggttgtgtgagtgtcttgttgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttgg 36698  T
Q  184 ttcatattgaaagat 198  Q
    |||||||||||||||    
T  36697 ttcatattgaaagat 36683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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