View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17166_high_15 (Length: 530)
Name: NF17166_high_15
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17166_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 1 - 512
Target Start/End: Complemental strand, 22919364 - 22918843
Alignment:
| Q |
1 |
aagaaattttaatctatgttcttatgatatttcaaccaacaactaataagaaaataaaaacttttttgaaaatatttatctatgacaatttgta------ |
94 |
Q |
| |
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|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22919364 |
aagaaattttaatctatgttcttatgatatttaaaccaacaactaataggaaaataaaaacttttttgaaaatatttatctatgacaatttgtagtgttt |
22919265 |
T |
|
| Q |
95 |
----actcctttacttcttgtgtttattgttttcatttctaatccaactggattagaaatttgctgaggtgactggtgaggagatgaagttggcgtactt |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22919264 |
tgtaactcctttacttcttgtgtttattgttttcatttctaatccaactggattagaaatttgctgaggtgactggtgaggagatgaagttggcgtactt |
22919165 |
T |
|
| Q |
191 |
gaacatagatccatcgtctcatttagtagtagtgtacttgcaaatattttgagaaacgatcaagtaaggatgcaccaaatatatttgacgtttatatgat |
290 |
Q |
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|
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
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| T |
22919164 |
gaacatagatccatcgtctaattgagtagtagtgtacttgcaaatattttgagaaacgatcaagtaaggatgcaccaaatataattgagatttatatgat |
22919065 |
T |
|
| Q |
291 |
agtgaagtagagatgttgaaggtcgaatttcggtcacgaagttcgggttagcaattttgatacttttaccagctaagacgtctggacttcaaactatagt |
390 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||||| |
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|
| T |
22919064 |
agtgaagtagagatattcaaggtcgaatttcggtcacaaagtccgggttaacaattttgatatttttaccagctaagacttctgaacttcaaactatagt |
22918965 |
T |
|
| Q |
391 |
ttttaatcatttgaaaaataataatttctgattaaaaattatttttacataccctaccactacaacaaatttgggatatagttcgaatttaaaaaatgcc |
490 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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|
| T |
22918964 |
ttttaatcatttgaaaaataataatttctgattaaaaattatttttacataccctaccactacaacaaatttgggatatagttcgaatttcaaaaatgcc |
22918865 |
T |
|
| Q |
491 |
aagcctgaggtaggagacaaag |
512 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
22918864 |
aagcctgaggtaggagacaaag |
22918843 |
T |
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