View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17166_high_5 (Length: 721)

Name: NF17166_high_5
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17166_high_5
NF17166_high_5
[»] chr1 (27 HSPs)
chr1 (17-714)||(5952854-5953551)
chr1 (364-432)||(51589817-51589885)
chr1 (650-699)||(27413371-27413420)
chr1 (364-432)||(51589003-51589071)
chr1 (364-421)||(27413369-27413426)
chr1 (660-701)||(51589828-51589869)
chr1 (364-432)||(4113011-4113079)
chr1 (361-429)||(16162947-16163015)
chr1 (364-432)||(17452684-17452752)
chr1 (364-432)||(25145490-25145558)
chr1 (364-432)||(26865363-26865431)
chr1 (364-432)||(29898923-29898991)
chr1 (364-432)||(40079163-40079231)
chr1 (364-432)||(51589237-51589305)
chr1 (660-698)||(2859648-2859686)
chr1 (361-435)||(5953739-5953813)
chr1 (370-432)||(27413593-27413655)
chr1 (660-701)||(4113027-4113068)
chr1 (660-701)||(9830602-9830643)
chr1 (660-701)||(12244983-12245024)
chr1 (660-701)||(17452700-17452741)
chr1 (660-701)||(25145506-25145547)
chr1 (660-701)||(40079174-40079215)
chr1 (650-699)||(40316061-40316110)
chr1 (660-701)||(42586460-42586501)
chr1 (660-701)||(51589014-51589055)
chr1 (660-701)||(51589248-51589289)
[»] scaffold0219 (1 HSPs)
scaffold0219 (437-561)||(13304-13428)
[»] chr5 (34 HSPs)
chr5 (364-432)||(38731843-38731911)
chr5 (364-432)||(20225052-20225120)
chr5 (364-432)||(27132998-27133066)
chr5 (373-432)||(3859322-3859381)
chr5 (361-432)||(6919431-6919501)
chr5 (650-701)||(24531621-24531672)
chr5 (370-432)||(17015890-17015952)
chr5 (352-432)||(9368841-9368921)
chr5 (364-432)||(24346506-24346574)
chr5 (364-432)||(41666762-41666830)
chr5 (364-432)||(41666998-41667066)
chr5 (364-419)||(15480583-15480638)
chr5 (369-432)||(17352445-17352508)
chr5 (660-699)||(38731859-38731898)
chr5 (370-432)||(95277-95339)
chr5 (660-702)||(9368616-9368658)
chr5 (364-418)||(24269876-24269930)
chr5 (660-698)||(24487666-24487704)
chr5 (370-432)||(24528551-24528613)
chr5 (371-432)||(170563-170624)
chr5 (660-701)||(170572-170613)
chr5 (364-433)||(1564572-1564641)
chr5 (660-701)||(6413447-6413488)
chr5 (367-432)||(7369735-7369800)
chr5 (660-701)||(8098339-8098380)
chr5 (660-701)||(17015900-17015941)
chr5 (668-701)||(17899489-17899522)
chr5 (367-432)||(18333473-18333538)
chr5 (660-701)||(24528562-24528603)
chr5 (660-701)||(25258115-25258156)
chr5 (660-701)||(25321905-25321946)
chr5 (660-701)||(27133014-27133055)
chr5 (660-701)||(41666778-41666819)
chr5 (660-701)||(41667014-41667055)
[»] chr4 (28 HSPs)
chr4 (437-595)||(3742740-3742898)
chr4 (364-432)||(9685409-9685477)
chr4 (364-432)||(400570-400638)
chr4 (364-432)||(22863485-22863553)
chr4 (122-166)||(24353470-24353514)
chr4 (364-432)||(53828528-53828596)
chr4 (361-432)||(11036748-11036819)
chr4 (650-701)||(35796753-35796804)
chr4 (364-431)||(50543335-50543402)
chr4 (660-701)||(12005490-12005531)
chr4 (364-432)||(12869268-12869336)
chr4 (364-432)||(21498806-21498874)
chr4 (364-432)||(22231313-22231381)
chr4 (364-432)||(37836091-37836159)
chr4 (364-432)||(40717446-40717514)
chr4 (650-701)||(5398487-5398538)
chr4 (355-418)||(21685023-21685086)
chr4 (361-432)||(35819130-35819201)
chr4 (660-698)||(400586-400624)
chr4 (660-698)||(21685023-21685061)
chr4 (437-483)||(37709945-37709991)
chr4 (371-400)||(2515976-2516005)
chr4 (660-701)||(11036767-11036808)
chr4 (660-701)||(21498817-21498858)
chr4 (660-701)||(22231329-22231370)
chr4 (660-701)||(28245547-28245588)
chr4 (660-701)||(53559311-53559352)
chr4 (660-701)||(53828544-53828585)
[»] scaffold0047 (2 HSPs)
scaffold0047 (361-432)||(12658-12729)
scaffold0047 (638-701)||(12669-12732)
[»] chr7 (32 HSPs)
chr7 (361-432)||(2401371-2401442)
chr7 (364-432)||(40746276-40746344)
chr7 (364-432)||(42985128-42985196)
chr7 (361-432)||(2544449-2544520)
chr7 (510-605)||(30279143-30279238)
chr7 (660-700)||(26028982-26029022)
chr7 (364-432)||(32278890-32278958)
chr7 (364-432)||(36277231-36277299)
chr7 (438-526)||(48693194-48693282)
chr7 (660-702)||(42985144-42985186)
chr7 (364-432)||(3392993-3393061)
chr7 (364-432)||(21054958-21055026)
chr7 (364-432)||(21861540-21861608)
chr7 (364-432)||(22574846-22574914)
chr7 (364-432)||(25620147-25620215)
chr7 (364-432)||(26239921-26239989)
chr7 (364-432)||(34027404-34027472)
chr7 (364-432)||(48243066-48243134)
chr7 (540-608)||(48693143-48693211)
chr7 (659-702)||(2232152-2232195)
chr7 (361-432)||(23796186-23796257)
chr7 (650-701)||(36277237-36277288)
chr7 (660-698)||(23839098-23839136)
chr7 (638-700)||(30727354-30727416)
chr7 (660-701)||(21054974-21055015)
chr7 (660-701)||(21861551-21861592)
chr7 (660-701)||(25620158-25620199)
chr7 (370-419)||(26028972-26029021)
chr7 (660-701)||(34027415-34027456)
chr7 (660-701)||(40746287-40746328)
chr7 (660-701)||(48243082-48243123)
chr7 (660-701)||(48661576-48661617)
[»] chr3 (36 HSPs)
chr3 (369-432)||(38791460-38791523)
chr3 (514-608)||(20844738-20844832)
chr3 (361-432)||(20327616-20327687)
chr3 (660-701)||(45828041-45828082)
chr3 (364-432)||(1723081-1723149)
chr3 (364-432)||(8018979-8019047)
chr3 (662-702)||(8142430-8142470)
chr3 (364-432)||(11589796-11589864)
chr3 (364-428)||(22729115-22729179)
chr3 (364-432)||(45828030-45828098)
chr3 (361-432)||(9273206-9273277)
chr3 (361-432)||(20303066-20303137)
chr3 (638-701)||(23708223-23708286)
chr3 (361-432)||(23708226-23708297)
chr3 (638-701)||(23726679-23726742)
chr3 (361-432)||(23726682-23726753)
chr3 (638-701)||(23745135-23745198)
chr3 (361-432)||(23745138-23745209)
chr3 (638-701)||(24063660-24063723)
chr3 (361-432)||(24063663-24063734)
chr3 (364-419)||(34610585-34610640)
chr3 (370-432)||(20327860-20327922)
chr3 (364-406)||(21717354-21717396)
chr3 (663-701)||(23691216-23691254)
chr3 (663-701)||(23708016-23708054)
chr3 (663-701)||(23726472-23726510)
chr3 (663-701)||(23744928-23744966)
chr3 (663-701)||(24063453-24063491)
chr3 (660-702)||(24866218-24866260)
chr3 (354-432)||(31317477-31317555)
chr3 (549-595)||(42980901-42980947)
chr3 (660-701)||(1723097-1723138)
chr3 (660-701)||(11589807-11589848)
chr3 (660-701)||(20327635-20327676)
chr3 (660-701)||(20327870-20327911)
chr3 (660-701)||(22729122-22729163)
[»] chr8 (32 HSPs)
chr8 (491-608)||(32049048-32049165)
chr8 (370-432)||(18004107-18004169)
chr8 (364-432)||(4828304-4828372)
chr8 (364-432)||(17469829-17469897)
chr8 (364-432)||(17477076-17477144)
chr8 (364-432)||(18939302-18939370)
chr8 (369-432)||(4828079-4828142)
chr8 (364-431)||(26800517-26800584)
chr8 (660-701)||(18939318-18939359)
chr8 (660-701)||(39743551-39743592)
chr8 (364-428)||(5590373-5590437)
chr8 (364-432)||(19256591-19256659)
chr8 (364-432)||(24075311-24075379)
chr8 (364-432)||(34842689-34842757)
chr8 (364-432)||(37001475-37001543)
chr8 (364-432)||(39743540-39743608)
chr8 (364-432)||(42049692-42049760)
chr8 (660-703)||(8716134-8716177)
chr8 (660-698)||(38476302-38476340)
chr8 (660-701)||(4828315-4828356)
chr8 (660-701)||(5590389-5590430)
chr8 (511-592)||(10177147-10177227)
chr8 (660-701)||(17469840-17469881)
chr8 (660-701)||(17477087-17477128)
chr8 (660-701)||(19256607-19256648)
chr8 (660-701)||(24075327-24075368)
chr8 (660-701)||(38447448-38447489)
chr8 (367-432)||(38475758-38475823)
chr8 (660-701)||(39052950-39052991)
chr8 (660-701)||(39960214-39960255)
chr8 (364-432)||(42846610-42846679)
chr8 (660-701)||(42846626-42846667)
[»] chr6 (32 HSPs)
chr6 (364-432)||(13740692-13740760)
chr6 (364-432)||(13746192-13746260)
chr6 (364-432)||(21690733-21690801)
chr6 (364-432)||(3680023-3680091)
chr6 (364-432)||(12329949-12330017)
chr6 (437-590)||(26219763-26219917)
chr6 (660-701)||(12329965-12330006)
chr6 (660-701)||(21690744-21690785)
chr6 (364-432)||(4868582-4868650)
chr6 (364-432)||(4868818-4868886)
chr6 (364-432)||(8001555-8001623)
chr6 (364-432)||(8026400-8026468)
chr6 (364-432)||(9705031-9705099)
chr6 (364-432)||(12330184-12330252)
chr6 (364-432)||(13740927-13740995)
chr6 (364-432)||(13746427-13746495)
chr6 (364-432)||(27656469-27656537)
chr6 (364-432)||(33494550-33494618)
chr6 (660-701)||(4868598-4868639)
chr6 (660-701)||(4868834-4868875)
chr6 (364-417)||(5572389-5572442)
chr6 (650-699)||(5648683-5648732)
chr6 (664-701)||(7915873-7915910)
chr6 (660-701)||(8026411-8026452)
chr6 (660-701)||(8026626-8026667)
chr6 (660-701)||(9705276-9705317)
chr6 (660-701)||(12330200-12330241)
chr6 (660-701)||(12330312-12330353)
chr6 (660-701)||(25065115-25065156)
chr6 (660-701)||(28867978-28868019)
chr6 (660-701)||(30256834-30256875)
chr6 (660-701)||(33494561-33494602)
[»] chr2 (22 HSPs)
chr2 (433-569)||(17296661-17296798)
chr2 (364-432)||(2324485-2324553)
chr2 (364-432)||(19191615-19191683)
chr2 (361-432)||(2324251-2324322)
chr2 (378-432)||(40149022-40149076)
chr2 (650-699)||(40149014-40149063)
chr2 (364-432)||(16419513-16419581)
chr2 (364-432)||(29718339-29718407)
chr2 (364-432)||(40379214-40379282)
chr2 (364-432)||(40379449-40379517)
chr2 (361-432)||(36352161-36352232)
chr2 (660-701)||(2324262-2324303)
chr2 (660-701)||(2324496-2324537)
chr2 (660-701)||(16419524-16419565)
chr2 (660-701)||(16533569-16533610)
chr2 (364-417)||(27897508-27897561)
chr2 (660-701)||(29718350-29718391)
chr2 (368-433)||(31008580-31008645)
chr2 (660-701)||(32884129-32884170)
chr2 (379-432)||(37812288-37812341)
chr2 (660-701)||(40379230-40379271)
chr2 (660-701)||(40379465-40379506)
[»] scaffold0766 (2 HSPs)
scaffold0766 (364-432)||(6285-6353)
scaffold0766 (660-701)||(6296-6337)
[»] scaffold0024 (1 HSPs)
scaffold0024 (361-432)||(89555-89626)
[»] scaffold0334 (2 HSPs)
scaffold0334 (370-432)||(4440-4502)
scaffold0334 (660-701)||(4450-4491)
[»] scaffold0129 (1 HSPs)
scaffold0129 (369-432)||(14314-14377)
[»] scaffold0092 (1 HSPs)
scaffold0092 (378-432)||(5901-5955)


Alignment Details
Target: chr1 (Bit Score: 662; Significance: 0; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 662; E-Value: 0
Query Start/End: Original strand, 17 - 714
Target Start/End: Original strand, 5952854 - 5953551
Alignment:
Q  17 agttaacaatgtaaattatgcttatcaatacatggtcacttataagaaagtcctcaaatttagtttgtatctcttggcaattccttacatctcgtataac 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5952854 agttaacaatgtaaattattcttatcaatacatggtcacttataagaaagtcctcaaatttagtttgtatctcttggcaattccttacatctcgtataac 5952953  T
Q  117 aaactttttctccttttatctaatttgagctcaaatttatttcacactatatctacatactctcatatcatatctctagctctcccctcaaacgcctact 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5952954 aaactttttctccttttatctaatttgagctcaaatttatttcacactatatctacatactctcatatcatatctctagctctcccctcaaacggctact 5953053  T
Q  217 tagaatttgaaggataaattatttagtttgtaagaaattatctgttgtagttgatctatctagtattggaaatgtataataacgatgttggaaaacttgc 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5953054 tagaatttgaaggataaattatttagtttgtaagaaattatctgttgtagttgatctatctagtattggaaatgtataataaagatgttggaaaacttgc 5953153  T
Q  317 ttcagattacttagattactttggtgtttagtaggagtttttcataaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagagga 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  5953154 ttcagattacttagattactttggtgtttagtaggagtttttcataaaaattgtggttgagcctaacacaaccttacaaaatcgacttgtgaggagagga 5953253  T
Q  417 ttgtcctcacttataattggaaattgctcttctccctttcaaaattgagcattcccttatttatgtctaacgttagttaactcaggctcggccttttcaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5953254 ttgtcctcacttataattggaaattgctcttctccctttcaaaattgagcattcccttatttatgtctaacgttagttaactcaggctcggccttttcaa 5953353  T
Q  517 cttgagttaattcaagctggacatttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaagggaggagaacaattttccttataat 616  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5953354 cttgagttaactcaagctggacatttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaagggaggagaacaattttccttataat 5953453  T
Q  617 tgcccccacttataaacacattcttaaaaaatttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgccttgaagtataatc 714  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  5953454 tgcccccacttataaacacattcttaaaaattttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgccctgaattataatc 5953551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 51589885 - 51589817
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||| || |||||||| ||||||||||||    
T  51589885 aaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttataa 51589817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 650 - 699
Target Start/End: Complemental strand, 27413420 - 27413371
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattg 699  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  27413420 tggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattg 27413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 51589071 - 51589003
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| ||||||||||||    
T  51589071 aaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataa 51589003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 27413426 - 27413369
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtc 421  Q
    |||| |||||||  ||||||||||||||||||||||| |||||| || ||||||||||    
T  27413426 aaatcgtggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattgtc 27413369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 51589869 - 51589828
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  51589869 taacacaaccccacaaaatcggcttgtgaggtgaggattgcc 51589828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 4113011 - 4113079
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  4113011 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 4113079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 429
Target Start/End: Complemental strand, 16163015 - 16162947
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcactta 429  Q
    ||||||||||||||||| ||||||||||| ||||||||||  || || || |||| |||||| ||||||    
T  16163015 taaaaattgtggttgagtctaacacaaccccacaaaatcggtttatgaggtgaggtttgtccccactta 16162947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 17452684 - 17452752
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  17452684 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 17452752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 25145490 - 25145558
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| | ||||||||||||||||||| ||||||||| || |||||||| || |||| ||||    
T  25145490 aaatcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgcccccactaataa 25145558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 26865363 - 26865431
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||||||||||| |||||| ||||||| || |||||| || | |||||| || |||||||||    
T  26865363 aaattgtggttgagcctaatacaaccccacaaaaccggcttgtgaggtggggattgcccccacttataa 26865431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 29898991 - 29898923
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||| ||||||||||||||| || |||||| || ||| |||| ||||||||||||    
T  29898991 aaatcgtggttgggcctagcacaacctcacaaaaccggcttgtgtggtgagaattgccctcacttataa 29898923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 40079231 - 40079163
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  40079231 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 40079163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 51589305 - 51589237
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||  ||||||||||||| ||||||| || |||||| || |||||||| ||||||||||||    
T  51589305 aaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataa 51589237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 698
Target Start/End: Original strand, 2859648 - 2859686
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggatt 698  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  2859648 taacacaacctcacaaaaccggcttgtgaggtgaggatt 2859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 361 - 435
Target Start/End: Original strand, 5953739 - 5953813
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataattg 435  Q
    ||||||||| ||||| |||||| |||||||||| ||| |  |||||  || || |||||||||||||||||||||    
T  5953739 taaaaattgaggttgggcctaatacaacctcactaaaccagcttgttaggtgaagattgtcctcacttataattg 5953813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 27413655 - 27413593
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||||||||||||||| |||| ||| ||||| || |||||||| |  |||||||||    
T  27413655 tggttgagcctaacacaacctcataaaaccgatttgtgaggtgaggattgcctccacttataa 27413593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 4113027 - 4113068
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  4113027 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 4113068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 9830643 - 9830602
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||||||| |||||||||| ||||| |||||||||||    
T  9830643 taacacaacctcataaaatcggcttgtgagctgaggattgcc 9830602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 12244983 - 12245024
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  12244983 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 12245024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 17452700 - 17452741
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  17452700 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 17452741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 25145506 - 25145547
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| || || |||||||||||||||||    
T  25145506 taacacaacctcacaaaaccgacttgtgaggtgaggattgcc 25145547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 40079215 - 40079174
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  40079215 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 40079174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 699
Target Start/End: Original strand, 40316061 - 40316110
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattg 699  Q
    ||||||||  |||||||||||||||||| |||||  ||||||||||||||    
T  40316061 tggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattg 40316110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 42586460 - 42586501
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| |||||||| |||| |||||||||||||||||    
T  42586460 taacacaaccccacaaaattggcttgtgaggtgaggattgcc 42586501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 51589055 - 51589014
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  51589055 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 51589014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 51589289 - 51589248
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  51589289 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 51589248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 437 - 561
Target Start/End: Original strand, 13304 - 13428
Alignment:
Q  437 aaattgctcttctccctttcaaaattgagcattcccttatttatgtctaacgttagttaactcaggctcggccttttcaacttgagttaattcaagctgg 536  Q
    ||||||| |||||||| | ||||||||  |||||||||||||||||||||| | |||||||||| ||||| | |||| ||| |||||||  ||| ||||     
T  13304 aaattgcacttctcccatccaaaattgttcattcccttatttatgtctaacatgagttaactcacgctcgacttttttaacgtgagttagctcacgctga 13403  T
Q  537 acatttttcaatatgagttaactca 561  Q
    ||||||||||  |||||||||||||    
T  13404 acatttttcagcatgagttaactca 13428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 38731843 - 38731911
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  38731843 aaatggtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggattgttctcacttataa 38731911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 20225120 - 20225052
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| |||||||| |||||||||||| ||||||||||||||||| || |||||||||||||| ||||||    
T  20225120 aaatcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattgtcctcatttataa 20225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 27132998 - 27133066
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| ||||||||||||    
T  27132998 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataa 27133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 432
Target Start/End: Original strand, 3859322 - 3859381
Alignment:
Q  373 ttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| |||| ||||||||  ||||||| || |||||||||||||||||||||    
T  3859322 ttgagcctaacataaccccacaaaattaacttgtgaggtgaggattgtcctcacttataa 3859381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 6919431 - 6919501
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||||||||||||||||||||||||| |  |||||| || ||| ||||||| |||||||||    
T  6919431 taaaaatcgtggttgagcctaacacaacctcacaaaa-ctgcttgtgaggtgagaattgtccccacttataa 6919501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 650 - 701
Target Start/End: Complemental strand, 24531672 - 24531621
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||  ||||||||||| ||||||||||||| |||||||||||||||||    
T  24531672 tggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgcc 24531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 17015890 - 17015952
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||| ||||||||||||| |||||||||| |||||| || ||| |||| ||||||||||||    
T  17015890 tggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattgccctcacttataa 17015952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 9368921 - 9368841
Alignment:
Q  352 agtttttcataaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||| || |||||||||||| ||||||||||||| |||| ||||| ||||||  | ||| |||| || |||||||||    
T  9368921 agtttttcttagaaattgtggttgggcctaacacaaccccacataatcggcttgtgaagtgagaattgcccccacttataa 9368841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 24346506 - 24346574
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||||||||||||||||| || |||| || |||||| || |||||||  || |||||||||    
T  24346506 aaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataa 24346574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 41666762 - 41666830
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  41666762 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 41666830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 41666998 - 41667066
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  41666998 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 41667066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 419
Target Start/End: Complemental strand, 15480638 - 15480583
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattg 419  Q
    |||||||||||| ||||||||||||| ||||||| || |||||| || ||||||||    
T  15480638 aaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 15480583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 17352445 - 17352508
Alignment:
Q  369 gtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||||||| ||||||||||||| || |||||| || || ||||| || |||||||||    
T  17352445 gtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataa 17352508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 699
Target Start/End: Original strand, 38731859 - 38731898
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattg 699  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  38731859 taacacaacctcacaaaatcgacttgtgaggtgaggattg 38731898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 95277 - 95339
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||| ||||||||||||| ||||||| || |||||| |  ||||||||||| |||||||||    
T  95277 tggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgtccccacttataa 95339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 702
Target Start/End: Complemental strand, 9368658 - 9368616
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcct 702  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||    
T  9368658 taacacaaccccacaaaaccggcttgtgaggtgaggattgcct 9368616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 24269876 - 24269930
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggatt 418  Q
    |||||||||||||||||||||||||| || |||| || |||||| || |||||||    
T  24269876 aaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggatt 24269930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 698
Target Start/End: Original strand, 24487666 - 24487704
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggatt 698  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  24487666 taacacaacctcacaaaaccggcttgtgaggtgaggatt 24487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 24528613 - 24528551
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 24528551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 432
Target Start/End: Original strand, 170563 - 170624
Alignment:
Q  371 ggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||| ||||||||||||||||||||| || |||||| || ||||| || || |||||||||    
T  170563 ggttgggcctaacacaacctcacaaaaccggcttgtgaggtgaggactgcccccacttataa 170624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 170572 - 170613
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| |||||||||||| ||||    
T  170572 taacacaacctcacaaaaccggcttgtgaggtgaggactgcc 170613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 433
Target Start/End: Original strand, 1564572 - 1564641
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataat 433  Q
    |||| ||||||||||||||||||||| |||||||  | ||||||  | |||||||| || ||||||||||    
T  1564572 aaatcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataat 1564641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 6413447 - 6413488
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  6413447 taacacaaccccacaaaatcggcttatgaggtgaggattgcc 6413488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 7369800 - 7369735
Alignment:
Q  367 ttgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||| ||||||||||||| ||||||| || |||||| || ||||| || || |||||||||    
T  7369800 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttataa 7369735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 8098380 - 8098339
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  8098380 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 8098339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 17015900 - 17015941
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||||||||| |||||||||| ||||||    
T  17015900 taacacaaccccacaaaatcggcttgtgaggtgagaattgcc 17015941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 701
Target Start/End: Original strand, 17899489 - 17899522
Alignment:
Q  668 cctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||||||||||| ||||||||||||||||    
T  17899489 cctcacaaaatcggctcatgaggtgaggattgcc 17899522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 18333473 - 18333538
Alignment:
Q  367 ttgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||| ||||||||||||| ||||||| || |||||| || |||||||  || |||||||||    
T  18333473 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataa 18333538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 24528603 - 24528562
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  24528603 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 24528562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 25258115 - 25258156
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  25258115 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 25258156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 25321905 - 25321946
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  25321905 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 25321946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 27133014 - 27133055
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  27133014 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 27133055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 41666778 - 41666819
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  41666778 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 41666819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 41667014 - 41667055
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  41667014 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 41667055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 595
Target Start/End: Original strand, 3742740 - 3742898
Alignment:
Q  437 aaattgctcttctccctttcaaaattgagcattcccttatttatgtctaacgttagttaactcaggctcggccttttcaacttgagttaattcaagctgg 536  Q
    |||||| ||||||||||||||||||||  || ||||||| ||||||  ||| | |||||||||| | ||||| |||||||| | ||||||||||   ||     
T  3742740 aaattgttcttctccctttcaaaattgctcaatcccttaattatgttcaacatgagttaactcacgttcggctttttcaacgtaagttaattcacaatga 3742839  T
Q  537 acatttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaagggag 595  Q
    |||||||| ||  ||||||||||||| ||| ||||  |||||  ||||| |||||||||    
T  3742840 acattttttaacgtgagttaactcacatagacatgcaaatgagcaaaaataaaagggag 3742898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 9685477 - 9685409
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||| || |||||||| || |||||||||    
T  9685477 aaatcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattggccccacttataa 9685409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 400570 - 400638
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||||||| |||||||||||||||||| || |||||| || |||||||  || |||||||||    
T  400570 aaattgtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataa 400638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 22863553 - 22863485
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || ||||||||| |||||||| || |||||||||    
T  22863553 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataa 22863485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 24353514 - 24353470
Alignment:
Q  122 ttttctccttttatctaatttgagctcaaatttatttcacactat 166  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  24353514 ttttctccttttatctaacttgagctcaaatttattttacactat 24353470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 53828528 - 53828596
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| |||||||||| ||| || || |||||||| || |||||||||    
T  53828528 aaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataa 53828596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 11036748 - 11036819
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||||||  ||||||||||||| |||| ||||| |||||| || |||||||| || |||||||||    
T  11036748 taaaaattgtggttaggcctaacacaaccccacacaatcggcttgtgaggtgaggattgcccccacttataa 11036819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 650 - 701
Target Start/End: Original strand, 35796753 - 35796804
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||  |||||||||||||||||| ||||| |||||||||||||||||    
T  35796753 tggttggacttaacacaacctcacaaaaccggcttgtgaggtgaggattgcc 35796804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 50543335 - 50543402
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttata 431  Q
    |||| ||||||| ||||||||||||| ||||||| || ||||||||| |||||||| || ||||||||    
T  50543335 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttata 50543402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 12005490 - 12005531
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  12005490 taacacaacctcacaaaaccggcttgtgaggtgaggattgcc 12005531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 12869268 - 12869336
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || ||| || || ||||||||||| |||||||||    
T  12869268 aaatcgtggttgggcctaacacaaccccacaaaaccgtcttatgaggtgaggattgtccccacttataa 12869336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 21498874 - 21498806
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  21498874 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 21498806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 22231313 - 22231381
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  22231313 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 22231381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 37836159 - 37836091
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||  ||||||||||||| ||||||| || |||||  ||||||||||| || |||||||||    
T  37836159 aaattgtggttaggcctaacacaaccccacaaaaccggcttgtaaggagaggattgcccccacttataa 37836091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 40717446 - 40717514
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| |||||| || || |||||||| || |||||||||    
T  40717446 aaatcgtggttgggcctaacacaaccccacaaaaccgacttttgaggtgaggattgcccccacttataa 40717514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 701
Target Start/End: Original strand, 5398487 - 5398538
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||  |||||||||| ||||||| ||||| |||||||||||||||||    
T  5398487 tggttggacctaacacaaccccacaaaaccggcttgtgaggtgaggattgcc 5398538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 21685086 - 21685023
Alignment:
Q  355 ttttcataaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggatt 418  Q
    ||||| || |||||||||||| || |||||||||| |||||||||| |||||| || |||||||    
T  21685086 ttttcttagaaattgtggttgggcttaacacaaccccacaaaatcggcttgtgaggtgaggatt 21685023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 35819130 - 35819201
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||| |||||||||||||||||||||  | |||||| || |||||||| || ||| |||||    
T  35819130 taaaaatcgtggttgggcctaacacaacctcacaaaactggcttgtgaggcgaggattgcccccacatataa 35819201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 698
Target Start/End: Original strand, 400586 - 400624
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggatt 698  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  400586 taacacaacctcacaaaaccggcttgtgaggtgaggatt 400624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 698
Target Start/End: Complemental strand, 21685061 - 21685023
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggatt 698  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  21685061 taacacaaccccacaaaatcggcttgtgaggtgaggatt 21685023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 437 - 483
Target Start/End: Complemental strand, 37709991 - 37709945
Alignment:
Q  437 aaattgctcttctccctttcaaaattgagcattcccttatttatgtc 483  Q
    ||||||||||||||||||| |||||||  |||||||||| |||||||    
T  37709991 aaattgctcttctccctttgaaaattgctcattcccttaattatgtc 37709945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 400
Target Start/End: Original strand, 2515976 - 2516005
Alignment:
Q  371 ggttgagcctaacacaacctcacaaaatcg 400  Q
    ||||||||||||||||||||||||||||||    
T  2515976 ggttgagcctaacacaacctcacaaaatcg 2516005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 11036767 - 11036808
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| |||| |||||||| |||||||||||||||||    
T  11036767 taacacaaccccacacaatcggcttgtgaggtgaggattgcc 11036808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 21498858 - 21498817
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  21498858 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 21498817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 22231329 - 22231370
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  22231329 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 22231370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 28245547 - 28245588
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  28245547 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 28245588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 53559311 - 53559352
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||||||||| || ||||||||||||||    
T  53559311 taacacaaccccacaaaatcggcttgtaaggtgaggattgcc 53559352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 53828544 - 53828585
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  53828544 taacacaaccccacaaaatcggcttatgaggtgaggattgcc 53828585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 12729 - 12658
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||||| || ||| |||||    
T  12729 taaaaattgtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgcccccacatataa 12658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 701
Target Start/End: Complemental strand, 12732 - 12669
Alignment:
Q  638 tcttaaaaaatttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||| | |||||||   |||||||||| |||||||||| || |||||||||||||||||    
T  12732 tcttaaaaattgtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgcc 12669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 2401442 - 2401371
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||  | || |||||||| |||||||||    
T  2401442 taaaaatcgtggttgagcctaacacaatctcacaaaatcgacttgtgaagtgaagattgtccacacttataa 2401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 40746344 - 40746276
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| |||||||||| ||| || || |||||||| ||||||||||||    
T  40746344 aaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccctcacttataa 40746276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 42985128 - 42985196
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| || |||||||| |  |||||||||    
T  42985128 aaattatggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcctccacttataa 42985196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 2544449 - 2544520
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||| ||||||||||||| ||||||| ||||||||| || |||||||| || |||||||||    
T  2544449 taaaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataa 2544520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 30279143 - 30279238
Alignment:
Q  510 ttttcaacttgagttaattcaagctggacatttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaagggaggagaacaatt 605  Q
    |||| ||| |||||||| ||||| |||||||||||||   ||||||||||||||||| || ||||||||  ||||||||| ||||| ||| |||||    
T  30279143 tttttaacgtgagttaactcaagttggacatttttcagcgtgagttaactcacgtagacacgtgaatgagcaaaaacaaatgggagaagatcaatt 30279238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 700
Target Start/End: Original strand, 26028982 - 26029022
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgc 700  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  26028982 taacacaacctcacaaaatcggcttgtgaggtgaggattgc 26029022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 32278890 - 32278958
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||||||||||| || ||| || || || |||||||| |||||||||    
T  32278890 aaatggtggttgagcctaacacaacctcacaaaaccggcttatgaggtgacgattgtccccacttataa 32278958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 36277231 - 36277299
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| | ||||||||||| ||||||||||||||||| || |||||||| || |||||||||    
T  36277231 aaatcgtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataa 36277299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 526
Target Start/End: Complemental strand, 48693282 - 48693194
Alignment:
Q  438 aattgctcttctccctttcaaaattgagcattcccttatttatgtctaacgttagttaactcaggctcggccttttcaacttgagttaa 526  Q
    |||||||||||||||||| ||||||   |||||||||| ||||||| | ||| |||||||||| ||| ||  |||||||| ||||||||    
T  48693282 aattgctcttctcccttttaaaattactcattcccttaattatgtccagcgtgagttaactcacgcttggttttttcaacgtgagttaa 48693194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 702
Target Start/End: Original strand, 42985144 - 42985186
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcct 702  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  42985144 taacacaacctcacaaaatcgacttgtgaggtgaggattgcct 42985186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 3393061 - 3392993
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||| || ||| ||| ||| |||||||||    
T  3393061 aaatggtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattttccccacttataa 3392993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 21054958 - 21055026
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  21054958 aaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 21055026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 21861608 - 21861540
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||  || |||||||| || |||||||||    
T  21861608 aaatggtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataa 21861540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 22574914 - 22574846
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||| ||||||||  || |||||| || |||||||| ||||||||||||    
T  22574914 aaatcgtggttgggcctaacacaaactcacaaatacggcttgtgaggtgaggattgccctcacttataa 22574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 25620215 - 25620147
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  25620215 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 25620147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 26239921 - 26239989
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| | ||||||||||| ||||| | ||||||||| || |||||||| || |||||||||    
T  26239921 aaattgtggttgggtctaacacaaccccacaataccgacttgtgaggtgaggattgcccccacttataa 26239989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 34027472 - 34027404
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  34027472 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 34027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 48243066 - 48243134
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  48243066 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 48243134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 608
Target Start/End: Complemental strand, 48693211 - 48693143
Alignment:
Q  540 tttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaagggaggagaacaattttc 608  Q
    ||||||||  |||||||||||||| |  || ||||||||  ||||||||||||||| ||||||||||||    
T  48693211 tttttcaacgtgagttaactcacgcatacacgtgaatgagtaaaaacaaaagggagaagaacaattttc 48693143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 702
Target Start/End: Complemental strand, 2232195 - 2232152
Alignment:
Q  659 ataacacaacctcacaaaatcggctcgtgaggtgaggattgcct 702  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||    
T  2232195 ataactcaaccttacaaaatcggcttgtgaggtgaggattgcct 2232152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 23796186 - 23796257
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||  |||||||||||||||||||| ||||||||| | ||||| || || ||||| || |||||||||    
T  23796186 taaaaatcatggttgagcctaacacaaccccacaaaatcaatttgtgaggtgatgattgcccccacttataa 23796257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 701
Target Start/End: Original strand, 36277237 - 36277288
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||| | |||||||||| |||||||||| || |||||||||||||||||    
T  36277237 tggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcc 36277288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 698
Target Start/End: Original strand, 23839098 - 23839136
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggatt 698  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  23839098 taacacaacctcacaaaaccggcttgtgaggtgaggatt 23839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 638 - 700
Target Start/End: Original strand, 30727354 - 30727416
Alignment:
Q  638 tcttaaaaaatttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgc 700  Q
    ||||||||| | |||| || | |||| ||||||||||||| ||||| ||||||||||||||||    
T  30727354 tcttaaaaattctggtcgggactaactcaacctcacaaaaccggcttgtgaggtgaggattgc 30727416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 21054974 - 21055015
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  21054974 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 21055015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 21861592 - 21861551
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||||||||| || ||||||||||||||    
T  21861592 taacacaaccccacaaaatcggcttgtaaggtgaggattgcc 21861551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 25620199 - 25620158
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  25620199 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 25620158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 26028972 - 26029021
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattg 419  Q
    |||||| | |||||||||||||||||||||| |||||| || ||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggattg 26029021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 34027456 - 34027415
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  34027456 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 34027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 40746328 - 40746287
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  40746328 taacacaaccccacaaaatcggcttatgaggtgaggattgcc 40746287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 48243082 - 48243123
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  48243082 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 48243123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 48661576 - 48661617
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||| ||||||||| ||||| |||||||||||||||||    
T  48661576 taacacaatctcacaaaaccggcttgtgaggtgaggattgcc 48661617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 38791460 - 38791523
Alignment:
Q  369 gtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||    
T  38791460 gtggttgggcctaacacaaccccacaaaatcgatttgtgaggtgaggattgtcctcacttataa 38791523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 608
Target Start/End: Complemental strand, 20844832 - 20844738
Alignment:
Q  514 caacttgagttaattcaagctggacatttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaagggaggagaacaattttc 608  Q
    |||| |||||||| | | |||||| ||||||||   ||||||||||||||||| || ||||||||  ||||||||||||||| ||| ||||||||    
T  20844832 caacgtgagttaacttacgctggatatttttcagcgtgagttaactcacgtagacacgtgaatgagcaaaaacaaaagggagaagagcaattttc 20844738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 20327616 - 20327687
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  20327616 taaaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 20327687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 45828082 - 45828041
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  45828082 taacacaacctcacaaaaccggcttgtgaggtgaggattgcc 45828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 1723081 - 1723149
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  1723081 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 1723149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 8019047 - 8018979
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| ||||||| || |||||| || ||||||||  | |||||||||    
T  8019047 aaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcacccacttataa 8018979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 662 - 702
Target Start/End: Original strand, 8142430 - 8142470
Alignment:
Q  662 acacaacctcacaaaatcggctcgtgaggtgaggattgcct 702  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  8142430 acacaacctcacaaaaccggcttgtgaggtgaggattgcct 8142470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 11589864 - 11589796
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  11589864 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 11589796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 22729179 - 22729115
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcactt 428  Q
    |||||||||||| ||||||||||||||||||||| || ||||||  | |||||||| || |||||    
T  22729179 aaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccactt 22729115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 45828098 - 45828030
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||| | ||||||||||||||||||||| || |||||| || |||||||| ||  ||||||||    
T  45828098 aaattgtggtagggcctaacacaacctcacaaaaccggcttgtgaggtgaggattgccccaacttataa 45828030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 9273277 - 9273206
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||||||||||||||||| ||||||| |  ||||||  | |||||||| || |||||||||    
T  9273277 taaaaatggtggttgagcctaacacaaccccacaaaaccagcttgtgaagtgaggattgcccccacttataa 9273206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 20303066 - 20303137
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||||||||||||||| | ||||||| ||  ||||| || |||||||| || |||||||||    
T  20303066 taaaaatcgtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataa 20303137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 701
Target Start/End: Original strand, 23708223 - 23708286
Alignment:
Q  638 tcttaaaaaatttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||| | || |||||  |||||||| ||||||||| ||||| |||||||||||||||||    
T  23708223 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcc 23708286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 23708226 - 23708297
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||| |||  |||||||||| ||||||||| || |||||| || |||||||| || |||||||||    
T  23708226 taaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataa 23708297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 701
Target Start/End: Original strand, 23726679 - 23726742
Alignment:
Q  638 tcttaaaaaatttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||| | || |||||  |||||||| ||||||||| ||||| |||||||||||||||||    
T  23726679 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcc 23726742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 23726682 - 23726753
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||| |||  |||||||||| ||||||||| || |||||| || |||||||| || |||||||||    
T  23726682 taaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataa 23726753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 701
Target Start/End: Original strand, 23745135 - 23745198
Alignment:
Q  638 tcttaaaaaatttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||| | || |||||  |||||||| ||||||||| ||||| |||||||||||||||||    
T  23745135 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcc 23745198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 23745138 - 23745209
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||| |||  |||||||||| ||||||||| || |||||| || |||||||| || |||||||||    
T  23745138 taaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataa 23745209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 701
Target Start/End: Original strand, 24063660 - 24063723
Alignment:
Q  638 tcttaaaaaatttggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||| | || |||||  |||||||| ||||||||| ||||| |||||||||||||||||    
T  24063660 tcttaaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcc 24063723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 24063663 - 24063734
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||| |||  |||||||||| ||||||||| || |||||| || |||||||| || |||||||||    
T  24063663 taaaaattgtgattggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataa 24063734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 419
Target Start/End: Complemental strand, 34610640 - 34610585
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattg 419  Q
    |||||||||||| | ||||||||||| ||||||| ||||||||| || ||||||||    
T  34610640 aaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattg 34610585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 20327860 - 20327922
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 20327922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 364 - 406
Target Start/End: Original strand, 21717354 - 21717396
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgt 406  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||    
T  21717354 aaattgtggttgggccgaacacaacctcacaaaaccgacttgt 21717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 701
Target Start/End: Original strand, 23691216 - 23691254
Alignment:
Q  663 cacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  23691216 cacaacctcacaaaaccggcttgtgaggtgaggattgcc 23691254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 701
Target Start/End: Original strand, 23708016 - 23708054
Alignment:
Q  663 cacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  23708016 cacaacctcacaaaaccggcttgtgaggtgaggattgcc 23708054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 701
Target Start/End: Original strand, 23726472 - 23726510
Alignment:
Q  663 cacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  23726472 cacaacctcacaaaaccggcttgtgaggtgaggattgcc 23726510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 701
Target Start/End: Original strand, 23744928 - 23744966
Alignment:
Q  663 cacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  23744928 cacaacctcacaaaaccggcttgtgaggtgaggattgcc 23744966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 701
Target Start/End: Original strand, 24063453 - 24063491
Alignment:
Q  663 cacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  24063453 cacaacctcacaaaaccggcttgtgaggtgaggattgcc 24063491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 702
Target Start/End: Complemental strand, 24866260 - 24866218
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcct 702  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||    
T  24866260 taacacaaccccacaaaaccggcttgtgaggtgaggattgcct 24866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 354 - 432
Target Start/End: Complemental strand, 31317555 - 31317477
Alignment:
Q  354 tttttcataaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||| || |||| ||||||| ||||||||||||| | |||||||| |||||| || || |||| ||| |||||||||    
T  31317555 tttttcttagaaatcgtggttgggcctaacacaaccccgcaaaatcggcttgtgaggtgatgattttccccacttataa 31317477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 595
Target Start/End: Complemental strand, 42980947 - 42980901
Alignment:
Q  549 atgagttaactcacgtaggcatgtgaatgataaaaaacaaaagggag 595  Q
    ||||| ||||||||||||||||| ||||||  |||||||||||||||    
T  42980947 atgagctaactcacgtaggcatgagaatgagcaaaaacaaaagggag 42980901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 1723097 - 1723138
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  1723097 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 1723138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 11589848 - 11589807
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  11589848 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 11589807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 20327635 - 20327676
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  20327635 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 20327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 20327870 - 20327911
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  20327870 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 20327911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 22729163 - 22729122
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| |||| ||||||||||||    
T  22729163 taacacaacctcacaaaaccggcttgtgaagtgaggattgcc 22729122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 608
Target Start/End: Complemental strand, 32049165 - 32049048
Alignment:
Q  491 agttaactcaggctcggccttttcaacttgagttaattcaagctggacatttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaa 590  Q
    |||||||||| ||| ||| |||||||| |||||||| | | |||||||||||||||   ||||||||||||||||| || |||||| |  ||||||||||    
T  32049165 agttaactcatgcttggctttttcaacgtgagttaacttacgctggacatttttcagcgtgagttaactcacgtagacacgtgaataagcaaaaacaaaa 32049066  T
Q  591 gggaggagaacaattttc 608  Q
     |||  ||| ||||||||    
T  32049065 aggaaaagagcaattttc 32049048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 18004107 - 18004169
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||| ||||||||||||||||||||| |||||| ||||| |||||||| || |||||||||    
T  18004107 tggttgggcctaacacaacctcacaaaaccgacttatggggtgaggattgcccccacttataa 18004169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 4828372 - 4828304
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  4828372 aaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 4828304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 17469897 - 17469829
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  17469897 aaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 17469829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 17477144 - 17477076
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  17477144 aaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 17477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 18939302 - 18939370
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| |||||||||||||||||||||||  |||||| || |||||||| || |||||||||    
T  18939302 aaatggtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataa 18939370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 4828142 - 4828079
Alignment:
Q  369 gtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||||||||| ||||||| || |||||| || ||||||||||| |||||||||    
T  4828142 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataa 4828079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 26800517 - 26800584
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttata 431  Q
    |||||||||||| ||||||||||||| ||||||| || |||||| || |||||||| || ||||||||    
T  26800517 aaattgtggttgggcctaacacaaccccacaaaaccggcttgtgtggtgaggattgcccccacttata 26800584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 18939318 - 18939359
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  18939318 taacacaacctcacaaaatcagcttgtgaggtgaggattgcc 18939359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 39743592 - 39743551
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  39743592 taacacaaccccacaaaatcggcttgtgaggtgaggattgcc 39743551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 5590373 - 5590437
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcactt 428  Q
    |||||||||||| ||||||||||||||||||||| || ||||||  | |||||||| || |||||    
T  5590373 aaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccactt 5590437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 19256591 - 19256659
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  19256591 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 19256659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 24075311 - 24075379
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  24075311 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 24075379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 34842757 - 34842689
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||| ||||||| |||| | || || |||||||| || |||||||||    
T  34842757 aaatcgtggttgagcctaacacaaccccacaaaaccgacctatgaggtgaggattgcccccacttataa 34842689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 37001543 - 37001475
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || ||||||  | ||||||||||| |||||||||    
T  37001543 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgtgaggattgtccccacttataa 37001475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 39743608 - 39743540
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||| || |||||||| ||  ||||||||    
T  39743608 aaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataa 39743540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 42049692 - 42049760
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||  ||||| ||||||||||||||| || ||||||||| |||||||| || |||||||||    
T  42049692 aaatcgtggttaggcctaccacaacctcacaaaaccggcttgtggggtgaggattgcccccacttataa 42049760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 703
Target Start/End: Complemental strand, 8716177 - 8716134
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcctt 703  Q
    |||||||||| |||||||||||||  ||||||||||||||||||    
T  8716177 taacacaaccccacaaaatcggcttatgaggtgaggattgcctt 8716134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 698
Target Start/End: Complemental strand, 38476340 - 38476302
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggatt 698  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  38476340 taacacaaccccacaaaatcggcttgtgaggtgaggatt 38476302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 4828356 - 4828315
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  4828356 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 4828315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 5590389 - 5590430
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| |||| ||||||||||||    
T  5590389 taacacaacctcacaaaaccggcttgtgaagtgaggattgcc 5590430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 592
Target Start/End: Complemental strand, 10177227 - 10177147
Alignment:
Q  511 tttcaacttgagttaattcaagctggacatttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaagg 592  Q
    ||||||| |||||||| ||| | ||  ||||||||||   |||||||||| |||||||||||||||||  ||||||||||||    
T  10177227 tttcaacgtgagttaactcacgttgagcatttttcaacgcgagttaactc-cgtaggcatgtgaatgagcaaaaacaaaagg 10177147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 17469881 - 17469840
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  17469881 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 17469840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 17477128 - 17477087
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  17477128 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 17477087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 19256607 - 19256648
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  19256607 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 19256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 24075327 - 24075368
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  24075327 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 24075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 38447448 - 38447489
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  38447448 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 38447489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 38475823 - 38475758
Alignment:
Q  367 ttgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||| |||||||||||||  |||||| || |||||| || |||||||| || |||||||||    
T  38475823 ttgtggttgggcctaacacaaccctacaaaaccggcttgtgaggtgaggattgcccccacttataa 38475758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 39052950 - 39052991
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  39052950 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 39052991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 39960255 - 39960214
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  39960255 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 39960214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 42846610 - 42846679
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcct-cacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| ||| |||||||||    
T  42846610 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctccacttataa 42846679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 42846626 - 42846667
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  42846626 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 42846667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 13740760 - 13740692
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||||||||||| |||||| || || ||||||||||  |||||||||    
T  13740760 aaatcgtggttgagcctaacacaacctcacaaaaccgacttatgaggcgaggattgtctccacttataa 13740692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 13746260 - 13746192
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||||||||||| |||||| || || ||||||||||  |||||||||    
T  13746260 aaatcgtggttgagcctaacacaacctcacaaaaccgacttatgaggcgaggattgtctccacttataa 13746192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 21690801 - 21690733
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||| |||||||||| |||||| || |||||||| || |||||||||    
T  21690801 aaatcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataa 21690733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 3680091 - 3680023
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| |  |||||||| || || ||||||    
T  3680091 aaattgtggttgggcctaacacaaccccacaaaatcgacttgtgagaggaggattgcccccagttataa 3680023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 12329949 - 12330017
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| |||||||||||||||||||||||  |||||| || |||||||| || |||||||||    
T  12329949 aaatcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataa 12330017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 590
Target Start/End: Original strand, 26219763 - 26219917
Alignment:
Q  437 aaattgctcttctccctttcaaaattgagcattcccttatttatgtctaacgttagttaactcaggctcggccttttcaacttgagttaattcaagctgg 536  Q
    |||||||||||||| |||| |||||||  |||||||||| |||| ||| || | |||||||||| ||||| | |||| ||| ||| |||| ||| | ||     
T  26219763 aaattgctcttctctcttttaaaattgttcattcccttaattatctct-acatgagttaactcacgctcgacttttttaacgtgaattaactcacgatga 26219861  T
Q  537 aca--tttttcaatatgagttaactcacgtaggcatgtgaatgataaaaaacaaaa 590  Q
    |||  |||||||  ||||||||||||| |||||||  |||||||  ||||||||||    
T  26219862 acatttttttcagcatgagttaactcaagtaggcacatgaatgagcaaaaacaaaa 26219917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 12329965 - 12330006
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  12329965 taacacaacctcacaaaatcagcttgtgaggtgaggattgcc 12330006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 21690785 - 21690744
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  21690785 taacacaaccccacaaaatcggcttgtgaggtgaggattgcc 21690744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 4868582 - 4868650
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  4868582 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 4868650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 4868818 - 4868886
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  4868818 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 4868886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 8001555 - 8001623
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| |||||||||||||  ||||||||||||| || || || ||||| || |||||||||    
T  8001555 aaattgtggttgggcctaacacaacccaacaaaatcgacttatgaggtgaagattgcccccacttataa 8001623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 8026468 - 8026400
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  8026468 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 8026400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 9705099 - 9705031
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| ||||||||| || || ||||| || |||||||||    
T  9705099 aaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataa 9705031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 12330184 - 12330252
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||||||||||| || |||||| || |||| ||| || |||||||||    
T  12330184 aaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataa 12330252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 13740995 - 13740927
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||  | ||||||||  | |||||||||    
T  13740995 aaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataa 13740927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 13746495 - 13746427
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||  | ||||||||  | |||||||||    
T  13746495 aaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataa 13746427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 27656537 - 27656469
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| ||||||||||||| ||||||| || |||||| || |||||||  || |||||||||    
T  27656537 aaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataa 27656469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 33494618 - 33494550
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  33494618 aaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 33494550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 4868598 - 4868639
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  4868598 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 4868639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 4868834 - 4868875
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  4868834 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 4868875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 5572389 - 5572442
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggat 417  Q
    |||| ||||||| ||||||||||||| ||||||| ||||||||| || ||||||    
T  5572389 aaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggat 5572442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 699
Target Start/End: Original strand, 5648683 - 5648732
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattg 699  Q
    ||||||||  |||||||||||||||||| ||||| ||||||||| |||||    
T  5648683 tggttggacctaacacaacctcacaaaaccggcttgtgaggtgatgattg 5648732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 701
Target Start/End: Complemental strand, 7915910 - 7915873
Alignment:
Q  664 acaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  7915910 acaaccccacaaaatcggcttgtgaggtgaggattgcc 7915873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 8026452 - 8026411
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  8026452 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 8026411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 8026667 - 8026626
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  8026667 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 8026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 9705317 - 9705276
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  9705317 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 9705276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 12330200 - 12330241
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| ||||||||||| |||||    
T  12330200 taacacaacctcacaaaaccggcttgtgaggtgagggttgcc 12330241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 12330312 - 12330353
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| ||||| |||||||||||    
T  12330312 taacacaacctcacaaaaccggcttgtgagatgaggattgcc 12330353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 25065115 - 25065156
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  25065115 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 25065156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 28867978 - 28868019
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  28867978 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 28868019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 30256875 - 30256834
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  30256875 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 30256834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 33494602 - 33494561
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  33494602 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 33494561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 17296798 - 17296661
Alignment:
Q  433 ttggaaattgctcttctccctttcaaaattgagcattcccttatttatgtctaacgttagttaactcaggctcggc-cttttcaacttgagttaattcaa 531  Q
    |||||||||||||||||||| ||||||||||  ||| |||||| ||||| | ||||| |||||| | | |||||||  |||||||| |||||||| |||     
T  17296798 ttggaaattgctcttctcccattcaaaattgctcatccccttaattatgcccaacgtgagttaagttacgctcggcttttttcaacgtgagttaactcac 17296699  T
Q  532 gctggacatttttcaatatgagttaactcacgtaggca 569  Q
      ||| |||||||||   ||| |||||||| |||||||    
T  17296698 attgggcatttttcagcgtgatttaactcatgtaggca 17296661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 2324553 - 2324485
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||||||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  2324553 aaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 2324485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 19191615 - 19191683
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || ||||||||||| |||||||||    
T  19191615 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataa 19191683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 2324322 - 2324251
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  2324322 taaaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 2324251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 378 - 432
Target Start/End: Original strand, 40149022 - 40149076
Alignment:
Q  378 cctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||| |||||||||| |||||| || ||||||||||| |||||||||    
T  40149022 cctaacacaaccccacaaaatcggcttgtgaggtgaggattgtccccacttataa 40149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 699
Target Start/End: Original strand, 40149014 - 40149063
Alignment:
Q  650 tggttggaaataacacaacctcacaaaatcggctcgtgaggtgaggattg 699  Q
    ||||||||  |||||||||| ||||||||||||| |||||||||||||||    
T  40149014 tggttggacctaacacaaccccacaaaatcggcttgtgaggtgaggattg 40149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 16419581 - 16419513
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  16419581 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 16419513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 29718407 - 29718339
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||  ||||||||||||| ||||||| || |||||| || |||||||| ||||||||||||    
T  29718407 aaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataa 29718339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 40379214 - 40379282
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  40379214 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 40379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 40379449 - 40379517
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  40379449 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 40379517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 36352161 - 36352232
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||||||| |||||||||||| ||||||| || ||| || || || ||||| || |||||||||    
T  36352161 taaaaattgtggttgaacctaacacaaccccacaaaaccggcttttgaggtgatgattgcccccacttataa 36352232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 2324303 - 2324262
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  2324303 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 2324262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 2324537 - 2324496
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  2324537 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 2324496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 16419565 - 16419524
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  16419565 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 16419524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 16533610 - 16533569
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||||||||||| ||||| |||| ||||||||||||    
T  16533610 taacacaacctcacaaaaccggcttgtgaagtgaggattgcc 16533569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 27897508 - 27897561
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggat 417  Q
    |||| |||||||||||||||||||||||| |||| || |||||| || ||||||    
T  27897508 aaatggtggttgagcctaacacaacctcataaaaccggcttgtgaggtgaggat 27897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 29718391 - 29718350
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  29718391 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 29718350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 433
Target Start/End: Original strand, 31008580 - 31008645
Alignment:
Q  368 tgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataat 433  Q
    |||||||||||||||||||||| ||||||| || | |||| || ||| |||| || ||||||||||    
T  31008580 tgtggttgagcctaacacaaccccacaaaaccggcatgtgaggtgagaattgcccacacttataat 31008645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 32884170 - 32884129
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  32884170 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 32884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 432
Target Start/End: Original strand, 37812288 - 37812341
Alignment:
Q  379 ctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||| || ||| |||||||||||||||| || ||||||||||| |||||||||    
T  37812288 ctaactcatccttacaaaatcgacttgtgaggtgaggattgtccccacttataa 37812341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 40379230 - 40379271
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  40379230 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 40379271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 40379465 - 40379506
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  40379465 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 40379506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 6353 - 6285
Alignment:
Q  364 aaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||| || |||||||| || |||||||||    
T  6353 aaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataa 6285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 6337 - 6296
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  6337 taacacaaccccacaaaatcggcttgtgaggtgaggattgcc 6296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 89555 - 89626
Alignment:
Q  361 taaaaattgtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  || ||  ||||||| |||||||||    
T  89555 taaaaattgtggttggacctaacacaacctcacaaaaccgacttgtaaggtgaatattgtccccacttataa 89626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 4440 - 4502
Alignment:
Q  370 tggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    |||||||||||||||||||| ||||||| || |||||| || |||||||| || |||||||||    
T  4440 tggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataa 4502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 4450 - 4491
Alignment:
Q  660 taacacaacctcacaaaatcggctcgtgaggtgaggattgcc 701  Q
    |||||||||| ||||||| ||||| |||||||||||||||||    
T  4450 taacacaaccccacaaaaccggcttgtgaggtgaggattgcc 4491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 14377 - 14314
Alignment:
Q  369 gtggttgagcctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||| ||||||||||||| ||||||| || |||||| || || |||||||| |||||||||    
T  14377 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgtccccacttataa 14314  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 378 - 432
Target Start/End: Complemental strand, 5955 - 5901
Alignment:
Q  378 cctaacacaacctcacaaaatcgacttgtggggagaggattgtcctcacttataa 432  Q
    ||||||||||||| ||||||||| ||||   || |||||||||||||||||||||    
T  5955 cctaacacaacctaacaaaatcggcttgaaaggtgaggattgtcctcacttataa 5901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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