View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17166_high_88 (Length: 257)

Name: NF17166_high_88
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17166_high_88
NF17166_high_88
[»] chr1 (35 HSPs)
chr1 (91-143)||(49402927-49402979)
chr1 (139-178)||(47022091-47022130)
chr1 (140-178)||(25235771-25235809)
chr1 (133-178)||(13545569-13545614)
chr1 (141-178)||(18458824-18458861)
chr1 (141-178)||(26097049-26097086)
chr1 (141-178)||(33936099-33936136)
chr1 (140-176)||(24963027-24963063)
chr1 (142-178)||(24987607-24987643)
chr1 (142-178)||(26095813-26095849)
chr1 (142-178)||(32131925-32131961)
chr1 (95-143)||(33622425-33622473)
chr1 (139-178)||(2059448-2059487)
chr1 (143-178)||(10027999-10028034)
chr1 (140-175)||(14625367-14625402)
chr1 (138-176)||(2472608-2472646)
chr1 (142-176)||(9439426-9439460)
chr1 (140-178)||(13903393-13903431)
chr1 (140-178)||(28724322-28724360)
chr1 (140-178)||(30434277-30434315)
chr1 (145-178)||(1825296-1825329)
chr1 (91-143)||(5463618-5463671)
chr1 (145-178)||(21853418-21853451)
chr1 (141-178)||(24545455-24545492)
chr1 (141-178)||(26399196-26399233)
chr1 (142-175)||(43635834-43635867)
chr1 (142-178)||(2472389-2472425)
chr1 (91-143)||(12484684-12484736)
chr1 (146-178)||(15336378-15336410)
chr1 (139-178)||(16699126-16699166)
chr1 (142-178)||(22604684-22604720)
chr1 (91-143)||(25487131-25487183)
chr1 (142-178)||(28410913-28410949)
chr1 (91-143)||(29567939-29567991)
chr1 (91-143)||(50249353-50249405)
[»] chr8 (38 HSPs)
chr8 (140-178)||(29309796-29309834)
chr8 (133-178)||(25277728-25277773)
chr8 (140-178)||(4482042-4482080)
chr8 (133-178)||(25653694-25653739)
chr8 (133-178)||(27987287-27987332)
chr8 (133-178)||(28044589-28044634)
chr8 (141-178)||(29309563-29309600)
chr8 (91-143)||(6374457-6374508)
chr8 (142-178)||(14329622-14329658)
chr8 (91-142)||(31899305-31899357)
chr8 (142-178)||(34985344-34985380)
chr8 (143-178)||(960519-960554)
chr8 (91-142)||(5295464-5295515)
chr8 (138-177)||(25601970-25602009)
chr8 (143-178)||(27543647-27543682)
chr8 (91-142)||(34156579-34156630)
chr8 (142-176)||(12330332-12330366)
chr8 (140-178)||(27198141-27198179)
chr8 (144-178)||(34901503-34901537)
chr8 (140-178)||(38711962-38712000)
chr8 (141-178)||(3912502-3912539)
chr8 (141-178)||(4335004-4335041)
chr8 (141-178)||(13572538-13572575)
chr8 (91-143)||(17920999-17921052)
chr8 (138-178)||(27543406-27543447)
chr8 (91-143)||(39698723-39698776)
chr8 (91-143)||(40228617-40228670)
chr8 (145-178)||(40652621-40652654)
chr8 (141-178)||(40702032-40702069)
chr8 (141-178)||(43400669-43400706)
chr8 (91-143)||(15160504-15160556)
chr8 (142-174)||(27987552-27987584)
chr8 (142-174)||(28044854-28044886)
chr8 (146-178)||(29726109-29726141)
chr8 (142-178)||(34227326-34227362)
chr8 (142-178)||(39451504-39451540)
chr8 (91-143)||(39463302-39463354)
chr8 (142-178)||(39513866-39513902)
[»] chr4 (44 HSPs)
chr4 (140-178)||(22272927-22272965)
chr4 (142-178)||(50727589-50727625)
chr4 (142-178)||(50735603-50735639)
chr4 (139-178)||(20125440-20125479)
chr4 (140-178)||(21780119-21780157)
chr4 (141-178)||(24215763-24215800)
chr4 (140-176)||(6595268-6595304)
chr4 (142-174)||(9001443-9001475)
chr4 (142-178)||(11563539-11563575)
chr4 (91-143)||(22220421-22220473)
chr4 (142-178)||(35539802-35539838)
chr4 (142-178)||(37273417-37273453)
chr4 (91-143)||(41496248-41496300)
chr4 (95-143)||(50203117-50203165)
chr4 (143-178)||(550673-550708)
chr4 (131-178)||(5514345-5514392)
chr4 (91-142)||(8971086-8971137)
chr4 (139-178)||(38656077-38656116)
chr4 (143-178)||(50138488-50138523)
chr4 (140-175)||(50881447-50881482)
chr4 (140-175)||(54554380-54554415)
chr4 (58-92)||(25231288-25231322)
chr4 (141-175)||(29248240-29248274)
chr4 (142-176)||(39868467-39868501)
chr4 (58-92)||(43337757-43337791)
chr4 (141-178)||(16493516-16493553)
chr4 (91-143)||(19930757-19930810)
chr4 (145-178)||(27579516-27579549)
chr4 (57-94)||(36558298-36558335)
chr4 (91-143)||(52957851-52957904)
chr4 (142-178)||(2032753-2032789)
chr4 (91-143)||(10573216-10573268)
chr4 (91-143)||(11364269-11364321)
chr4 (142-178)||(19909347-19909383)
chr4 (91-143)||(25231218-25231270)
chr4 (142-178)||(29104158-29104194)
chr4 (142-178)||(31226521-31226557)
chr4 (91-142)||(42605616-42605668)
chr4 (91-143)||(44868313-44868365)
chr4 (91-143)||(45839680-45839732)
chr4 (91-143)||(47817781-47817833)
chr4 (138-178)||(48029410-48029450)
chr4 (138-178)||(52439334-52439374)
chr4 (91-142)||(52848115-52848167)
[»] chr6 (20 HSPs)
chr6 (133-178)||(10545821-10545866)
chr6 (141-178)||(3063505-3063542)
chr6 (141-178)||(29942465-29942502)
chr6 (143-178)||(5334643-5334678)
chr6 (143-178)||(10344050-10344085)
chr6 (143-178)||(13114398-13114433)
chr6 (143-178)||(14328668-14328703)
chr6 (143-178)||(14421678-14421713)
chr6 (139-178)||(31851754-31851793)
chr6 (142-175)||(56137-56170)
chr6 (141-178)||(22366240-22366277)
chr6 (141-174)||(22574056-22574089)
chr6 (141-178)||(24062165-24062202)
chr6 (143-176)||(24387785-24387818)
chr6 (108-136)||(5827780-5827808)
chr6 (142-178)||(8237998-8238034)
chr6 (91-143)||(12459376-12459428)
chr6 (138-178)||(16129489-16129529)
chr6 (142-178)||(22573801-22573837)
chr6 (142-178)||(29964461-29964497)
[»] scaffold0032 (1 HSPs)
scaffold0032 (138-178)||(91045-91085)
[»] chr7 (43 HSPs)
chr7 (142-178)||(24555923-24555959)
chr7 (140-178)||(1594146-1594184)
chr7 (140-178)||(6269525-6269563)
chr7 (140-178)||(48945181-48945219)
chr7 (141-178)||(19272471-19272508)
chr7 (141-178)||(23784582-23784619)
chr7 (42-91)||(42286022-42286070)
chr7 (138-178)||(13882598-13882638)
chr7 (141-176)||(9915649-9915684)
chr7 (141-176)||(9923561-9923596)
chr7 (143-178)||(13279439-13279474)
chr7 (143-178)||(23371449-23371484)
chr7 (138-177)||(26050426-26050465)
chr7 (138-177)||(26059785-26059824)
chr7 (143-178)||(38193216-38193251)
chr7 (143-178)||(39580188-39580223)
chr7 (141-175)||(9553398-9553432)
chr7 (140-178)||(10688455-10688493)
chr7 (144-178)||(13797633-13797667)
chr7 (140-178)||(21444205-21444243)
chr7 (140-178)||(33757407-33757445)
chr7 (133-178)||(38192952-38192998)
chr7 (58-92)||(44567045-44567079)
chr7 (142-178)||(1676414-1676451)
chr7 (142-178)||(20041157-20041194)
chr7 (141-178)||(20164445-20164482)
chr7 (91-143)||(27947556-27947609)
chr7 (141-178)||(32946284-32946321)
chr7 (141-178)||(39065381-39065418)
chr7 (91-143)||(45948685-45948738)
chr7 (91-143)||(10476179-10476231)
chr7 (142-178)||(10980618-10980654)
chr7 (139-175)||(12005260-12005296)
chr7 (142-178)||(14554470-14554506)
chr7 (142-178)||(24478023-24478059)
chr7 (142-178)||(24845637-24845673)
chr7 (91-143)||(25440915-25440967)
chr7 (142-178)||(26050174-26050210)
chr7 (142-178)||(26059533-26059569)
chr7 (142-178)||(31186667-31186703)
chr7 (138-178)||(32200100-32200140)
chr7 (142-174)||(35913310-35913342)
chr7 (138-178)||(42202156-42202196)
[»] chr5 (27 HSPs)
chr5 (138-178)||(9751698-9751738)
chr5 (133-178)||(17886043-17886088)
chr5 (141-178)||(29104442-29104479)
chr5 (141-178)||(38482316-38482353)
chr5 (91-143)||(3024989-3025041)
chr5 (142-178)||(10976769-10976805)
chr5 (91-143)||(11977631-11977683)
chr5 (142-178)||(15395543-15395579)
chr5 (142-178)||(22551521-22551557)
chr5 (138-178)||(25962797-25962837)
chr5 (139-178)||(31312793-31312832)
chr5 (140-178)||(4413924-4413962)
chr5 (140-178)||(12148248-12148286)
chr5 (140-178)||(31861488-31861526)
chr5 (143-176)||(12399610-12399643)
chr5 (142-175)||(15061848-15061881)
chr5 (142-175)||(15615102-15615135)
chr5 (91-143)||(39504766-39504819)
chr5 (91-143)||(10344990-10345042)
chr5 (142-178)||(15396492-15396528)
chr5 (146-178)||(20689050-20689082)
chr5 (142-178)||(21039864-21039900)
chr5 (138-178)||(26034840-26034880)
chr5 (142-178)||(33052816-33052852)
chr5 (91-143)||(36164930-36164982)
chr5 (91-143)||(38369915-38369967)
chr5 (133-169)||(39418760-39418796)
[»] chr2 (33 HSPs)
chr2 (143-178)||(28149688-28149723)
chr2 (141-178)||(17328090-17328127)
chr2 (138-178)||(6468053-6468093)
chr2 (142-178)||(19493470-19493506)
chr2 (142-178)||(20182263-20182299)
chr2 (142-178)||(22116154-22116190)
chr2 (138-178)||(23260315-23260355)
chr2 (142-178)||(34635705-34635741)
chr2 (138-178)||(36525614-36525654)
chr2 (138-178)||(38385930-38385970)
chr2 (142-178)||(45464633-45464669)
chr2 (143-178)||(19641446-19641481)
chr2 (143-178)||(19840039-19840074)
chr2 (139-178)||(22535450-22535489)
chr2 (143-178)||(29835102-29835137)
chr2 (143-178)||(37147551-37147586)
chr2 (140-178)||(3364583-3364621)
chr2 (58-92)||(14286044-14286078)
chr2 (142-176)||(16577371-16577405)
chr2 (140-178)||(19052195-19052233)
chr2 (141-175)||(23835797-23835831)
chr2 (140-178)||(35007912-35007950)
chr2 (140-178)||(38127760-38127798)
chr2 (138-175)||(16670494-16670531)
chr2 (145-178)||(30371618-30371651)
chr2 (142-175)||(38937533-38937566)
chr2 (145-178)||(43301882-43301915)
chr2 (91-143)||(17695883-17695935)
chr2 (138-178)||(28141683-28141723)
chr2 (142-178)||(30371384-30371420)
chr2 (138-178)||(34404612-34404652)
chr2 (144-176)||(38210865-38210897)
chr2 (91-142)||(45081957-45082009)
[»] scaffold0250 (1 HSPs)
scaffold0250 (138-175)||(10075-10112)
[»] chr3 (35 HSPs)
chr3 (141-178)||(20737508-20737545)
chr3 (91-143)||(36729864-36729917)
chr3 (141-178)||(51460785-51460822)
chr3 (46-94)||(3985972-3986019)
chr3 (142-178)||(6510214-6510250)
chr3 (142-178)||(12066228-12066264)
chr3 (142-178)||(49872971-49873007)
chr3 (140-175)||(37977531-37977566)
chr3 (143-178)||(47115584-47115619)
chr3 (143-178)||(49880759-49880794)
chr3 (143-178)||(54567765-54567800)
chr3 (141-178)||(5205114-5205152)
chr3 (140-178)||(27497796-27497834)
chr3 (140-178)||(27760286-27760324)
chr3 (133-178)||(30586152-30586198)
chr3 (138-178)||(4699970-4700011)
chr3 (142-178)||(5205376-5205413)
chr3 (141-178)||(14241212-14241249)
chr3 (141-178)||(18140938-18140975)
chr3 (141-178)||(18142219-18142256)
chr3 (141-174)||(20957195-20957228)
chr3 (145-178)||(22949248-22949281)
chr3 (141-178)||(25110083-25110120)
chr3 (91-143)||(41287550-41287603)
chr3 (142-175)||(46597533-46597566)
chr3 (133-178)||(47117576-47117621)
chr3 (138-178)||(51252306-51252347)
chr3 (141-178)||(53806818-53806855)
chr3 (146-178)||(5417288-5417320)
chr3 (146-178)||(8827447-8827479)
chr3 (95-143)||(22857133-22857181)
chr3 (95-143)||(42072028-42072076)
chr3 (91-143)||(42571584-42571636)
chr3 (143-175)||(46610009-46610041)
chr3 (95-143)||(50646169-50646217)
[»] scaffold0769 (1 HSPs)
scaffold0769 (142-178)||(4173-4209)
[»] scaffold0983 (1 HSPs)
scaffold0983 (91-142)||(744-795)
[»] scaffold0384 (2 HSPs)
scaffold0384 (143-178)||(4449-4484)
scaffold0384 (140-178)||(4246-4284)
[»] scaffold0142 (1 HSPs)
scaffold0142 (143-178)||(34848-34883)
[»] scaffold0031 (1 HSPs)
scaffold0031 (143-178)||(1827-1862)
[»] scaffold0010 (1 HSPs)
scaffold0010 (143-178)||(26308-26343)
[»] scaffold0502 (1 HSPs)
scaffold0502 (91-143)||(629-681)
[»] scaffold0450 (2 HSPs)
scaffold0450 (142-178)||(7858-7894)
scaffold0450 (142-178)||(8117-8153)
[»] scaffold0332 (1 HSPs)
scaffold0332 (91-143)||(3868-3920)
[»] scaffold0136 (1 HSPs)
scaffold0136 (142-178)||(658-694)
[»] scaffold0095 (1 HSPs)
scaffold0095 (142-178)||(10354-10390)


Alignment Details
Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 49402927 - 49402979
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  49402927 tttggaagtaatgtgcaaaatattaattggagagtacaattgaaaagaaaaag 49402979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 47022130 - 47022091
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  47022130 aaaagggttaataggtctttaccccctgtaatataggtca 47022091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 25235771 - 25235809
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  25235771 aaagggttaataggtctttaccccctgtaatataggtca 25235809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 13545569 - 13545614
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  13545569 aaaaaaaaaagggttaataggtctttaccccctgtaatatatgtca 13545614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 18458861 - 18458824
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18458861 aagggttaataggtctttaccccctgtaatataggtca 18458824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 26097086 - 26097049
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26097086 aagggttaataggtctttaccccctgtaatataggtca 26097049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 33936136 - 33936099
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  33936136 aagggttaataggattttaccccctgtaatataggtca 33936099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 24963063 - 24963027
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggt 176  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24963063 aaagggttaataggcttttaccccctgtaatataggt 24963027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 24987607 - 24987643
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24987607 agggttaataggtctttaccccctgtaatataggtca 24987643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 26095813 - 26095849
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26095813 agggttaataggtctttaccccctgtaatataggtca 26095849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 32131961 - 32131925
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  32131961 agggttaataggtctttaccccctgtaatataggtca 32131925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 33622425 - 33622473
Alignment:
Q  95 gaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||| ||||||||||||||| || |||||||||||||||||| ||||    
T  33622425 gaagtagtgtacataatattaactaaagagtacaattgaaaagataaag 33622473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 2059487 - 2059448
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  2059487 aaaaggattaataggtctttaccccctgtaatataggtca 2059448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 10028034 - 10027999
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  10028034 gggttaataggtctttaccccctgtaatataggtca 10027999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 14625367 - 14625402
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||||| ||||||||||||||||||||    
T  14625367 aaagggttaataggtctttaccccctgtaatatagg 14625402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 2472646 - 2472608
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggt 176  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  2472646 aaaaatggttaataggtctttaccccctgtaatataggt 2472608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 9439460 - 9439426
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggt 176  Q
    ||||||||||||| |||||||||||||||||||||    
T  9439460 agggttaataggtctttaccccctgtaatataggt 9439426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 13903431 - 13903393
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  13903431 aaagggttaatagatctttaccccctgtaatataggtca 13903393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 28724322 - 28724360
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  28724322 aaagggttaataggtctttaccccctgtaaaataggtca 28724360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 30434277 - 30434315
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  30434277 aaagggttaatcggtctttaccccctgtaatataggtca 30434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 1825296 - 1825329
Alignment:
Q  145 gttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  1825296 gttaataggtctttaccccctgtaatataggtca 1825329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 5463671 - 5463618
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| |||| ||||||||| || ||||||||||||||||||||    
T  5463671 tttggaagtagtgtaacatagtattaattaaagtgtacaattgaaaagaaaaag 5463618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 21853418 - 21853451
Alignment:
Q  145 gttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  21853418 gttaataggtctttaccccctgtaatataggtca 21853451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 24545455 - 24545492
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  24545455 aagggttaataggcttttaccccctataatataggtca 24545492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 26399233 - 26399196
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  26399233 aagggttaatagtgttttaccccctgtaatataggtca 26399196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 43635834 - 43635867
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||| ||||||||||||||||||||    
T  43635834 agggttaataggtctttaccccctgtaatatagg 43635867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 2472389 - 2472425
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  2472389 agggttaataggtctttaacccctgtaatataggtca 2472425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 12484684 - 12484736
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| | ||||||||||| ||| ||||| ||||||||||||||    
T  12484684 tttggaagtagtgtgcctaatattaattggagggtacagttgaaaagaaaaag 12484736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 15336378 - 15336410
Alignment:
Q  146 ttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||| |||||||||||||||||||||||    
T  15336378 ttaataggtctttaccccctgtaatataggtca 15336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 16699166 - 16699126
Alignment:
Q  139 aaaagggttaataggtttttaccccct-gtaatataggtca 178  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  16699166 aaaagggttaataggtctttaccccctggtaatataggtca 16699126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 22604720 - 22604684
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  22604720 agggttaataggtctttaacccctgtaatataggtca 22604684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 25487183 - 25487131
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  25487183 tttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaag 25487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 28410913 - 28410949
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  28410913 agggttaataggtctttatcccctgtaatataggtca 28410949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 29567991 - 29567939
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| ||| ||||||||  || ||||||||||||||||||||    
T  29567991 tttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaag 29567939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 50249405 - 50249353
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  50249405 tttggaagtagtgtgcaaagtattaattggagggtacaattgaaaagaaaaag 50249353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 29309834 - 29309796
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29309834 aaagggttaataggtttttaccccctgtaatataggtca 29309796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 25277773 - 25277728
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  25277773 aaaaaaaaaagggttaataggtctttaccccctgtaatataggtca 25277728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 4482042 - 4482080
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  4482042 aaagggttaataggtttttaccccctgtaatatatgtca 4482080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 25653694 - 25653739
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||    
T  25653694 aaaaaaaaaagggttaatagtgttttaccccctgtaatataggtca 25653739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 27987287 - 27987332
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||    
T  27987287 aaaaaaaaaagggttaataggtctttaccccctataatataggtca 27987332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 28044589 - 28044634
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||    
T  28044589 aaaaaaaaaagggttaataggtctttaccccctataatataggtca 28044634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 29309563 - 29309600
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29309563 aagggttaataggtctttaccccctgtaatataggtca 29309600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 6374508 - 6374457
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| |||||||||||| ||  ||||||||||||||||||||    
T  6374508 tttggaagtaatgtatataatattaatt-gaaggtacaattgaaaagaaaaag 6374457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 14329658 - 14329622
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  14329658 agggttaataggtctttaccccctgtaatataggtca 14329622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 31899305 - 31899357
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaa 142  Q
    |||||||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  31899305 tttggaagtagtgtaacataatattaattgaagagtacaattgaaaagaaaaa 31899357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 34985380 - 34985344
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34985380 agggttaataggtctttaccccctgtaatataggtca 34985344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 960554 - 960519
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  960554 gggttaataggtctttaccccctgtaatataggtca 960519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 5295464 - 5295515
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaa 142  Q
    |||||||||| |||| ||||||||||||  || |||||||||||||||||||    
T  5295464 tttggaagtagtgtatataatattaattgaagggtacaattgaaaagaaaaa 5295515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 25602009 - 25601970
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtc 177  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  25602009 aaaaagggttaataggtctttaccccatgtaatataggtc 25601970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 27543682 - 27543647
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  27543682 gggttaataggtctttaccccctgtaatataggtca 27543647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 34156630 - 34156579
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaa 142  Q
    |||||||||| |||||||| ||||||||  || |||||||||||||||||||    
T  34156630 tttggaagtagtgtacatagtattaattgaagggtacaattgaaaagaaaaa 34156579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 12330332 - 12330366
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggt 176  Q
    ||||||||||||| |||||||||||||||||||||    
T  12330332 agggttaataggtctttaccccctgtaatataggt 12330366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 27198141 - 27198179
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  27198141 aaagggttaataggtctttatcccctgtaatataggtca 27198179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 34901503 - 34901537
Alignment:
Q  144 ggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| ||||||||||||||||||||||||    
T  34901503 ggttaataggcttttaccccctgtaatataggtca 34901537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 38712000 - 38711962
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  38712000 aaagggttaatagtgttttaccccctgtaatataggtca 38711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 3912539 - 3912502
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||| || |||||||||||||||||||||||    
T  3912539 aagggttaataagtctttaccccctgtaatataggtca 3912502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 4335041 - 4335004
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  4335041 aagggttaatagtgttttaccccctgtaatataggtca 4335004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 13572538 - 13572575
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  13572538 aagggttaatagtgttttaccccctgtaatataggtca 13572575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 17921052 - 17920999
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| |||||||||||||  |||||||||||| ||||||||||    
T  17921052 tttggaagtagtgtaacataatattaattgaagagtacaattgtaaagaaaaag 17920999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 27543406 - 27543447
Alignment:
Q  138 aaaaagggttaataggttttta-ccccctgtaatataggtca 178  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  27543406 aaaaagggttaataggtctttacccccctgtaatataggtca 27543447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 39698723 - 39698776
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| |||| ||||||||  || ||||||||||||||||||||    
T  39698723 tttggaagtaatgtaacatagtattaattgaagggtacaattgaaaagaaaaag 39698776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 40228670 - 40228617
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| |||||||||||||  |  ||||||||||||||||||||    
T  40228670 tttggaagtaatgtaacataatattaattgaaatgtacaattgaaaagaaaaag 40228617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 40652621 - 40652654
Alignment:
Q  145 gttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  40652621 gttaataggtctttaccccctgtaatataggtca 40652654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 40702069 - 40702032
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  |||||||||||||||||||||||    
T  40702069 aagggttaataggcctttaccccctgtaatataggtca 40702032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 43400669 - 43400706
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  43400669 aagggttaataggtctttaccccctgtaatatatgtca 43400706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 15160504 - 15160556
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  15160504 tttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaag 15160556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 27987584 - 27987552
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatag 174  Q
    ||||||||||||| |||||||||||||||||||    
T  27987584 agggttaataggtctttaccccctgtaatatag 27987552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 28044886 - 28044854
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatag 174  Q
    ||||||||||||| |||||||||||||||||||    
T  28044886 agggttaataggtctttaccccctgtaatatag 28044854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 29726109 - 29726141
Alignment:
Q  146 ttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||| ||||||||||||||    
T  29726109 ttaataggtttttaccccatgtaatataggtca 29726141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 34227326 - 34227362
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  34227326 agggttaatagtgttttaccccctgtaatataggtca 34227362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 39451504 - 39451540
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  39451504 agggttaataggtttttaccccctctaatataagtca 39451540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 39463354 - 39463302
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| ||| ||||||||  || ||||||||||||||||||||    
T  39463354 tttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaag 39463302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 39513866 - 39513902
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||  |||||||||||||||||||||||    
T  39513866 agggttaataggcatttaccccctgtaatataggtca 39513902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 22272927 - 22272965
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22272927 aaagggttaataggtttttaccccctgtaatataggtca 22272965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 50727589 - 50727625
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||||||||||||||||    
T  50727589 agggttaataggtttttaccccctgtaatataggtca 50727625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 50735603 - 50735639
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||||||||||||||||    
T  50735603 agggttaataggtttttaccccctgtaatataggtca 50735639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 20125479 - 20125440
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  20125479 aaaagggttaataggtctttaccccctgtaatataggtca 20125440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 21780119 - 21780157
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21780119 aaagggttaataggtctttaccccctgtaatataggtca 21780157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 24215800 - 24215763
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24215800 aagggttaataggtctttaccccctgtaatataggtca 24215763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 6595304 - 6595268
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggt 176  Q
    ||||||||||||||||||||||| |||||||||||||    
T  6595304 aaagggttaataggtttttaccctctgtaatataggt 6595268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 9001443 - 9001475
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatag 174  Q
    |||||||||||||||||||||||||||||||||    
T  9001443 agggttaataggtttttaccccctgtaatatag 9001475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 11563575 - 11563539
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11563575 agggttaataggtctttaccccctgtaatataggtca 11563539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 22220421 - 22220473
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| |||| |||||||| ||| ||||||||||||||||||||    
T  22220421 tttggaagtagtgtgcatagtattaattggagggtacaattgaaaagaaaaag 22220473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 35539838 - 35539802
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35539838 agggttaataggtatttaccccctgtaatataggtca 35539802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 37273453 - 37273417
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37273453 agggttaataggtctttaccccctgtaatataggtca 37273417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 41496300 - 41496248
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||| |||| |||| ||||||||||||  |||||||||||||||||||||||    
T  41496300 tttgggagtagtgtatataatattaattgaagagtacaattgaaaagaaaaag 41496248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 50203165 - 50203117
Alignment:
Q  95 gaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  50203165 gaagtaatgtatataatattaattgaagggtacaattgaaaagaaaaag 50203117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 550673 - 550708
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  550673 gggttaataggtctttaccccctgtaatataggtca 550708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 5514345 - 5514392
Alignment:
Q  131 tgaaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||||||||  |||||| |||| ||||||||||||    
T  5514345 tgaaaagaaaaagggttaatagtattttactccctataatataggtca 5514392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 8971137 - 8971086
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaa 142  Q
    |||||||||| |||| ||| ||||||||  ||||||||||||||||||||||    
T  8971137 tttggaagtagtgtatatattattaattgaagagtacaattgaaaagaaaaa 8971086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 38656116 - 38656077
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  38656116 aaaagggttaataggtctttaccccctataatataggtca 38656077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 50138488 - 50138523
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  50138488 gggttaataggtctttaccccctgtaatataggtca 50138523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 50881482 - 50881447
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||||| ||||||||||||||||||||    
T  50881482 aaagggttaataggtctttaccccctgtaatatagg 50881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 54554380 - 54554415
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||||| ||||||||||||||||||||    
T  54554380 aaagggttaataggtctttaccccctgtaatatagg 54554415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 25231322 - 25231288
Alignment:
Q  58 ttattttatcaaattatcgttattaactattggtt 92  Q
    |||||||||||||||||| ||||||||||||||||    
T  25231322 ttattttatcaaattatctttattaactattggtt 25231288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 29248240 - 29248274
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatatagg 175  Q
    |||||||||||||| ||||||||||||||||||||    
T  29248240 aagggttaataggtctttaccccctgtaatatagg 29248274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 39868467 - 39868501
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggt 176  Q
    |||| ||||||||||||||||||||||||||||||    
T  39868467 agggataataggtttttaccccctgtaatataggt 39868501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 43337757 - 43337791
Alignment:
Q  58 ttattttatcaaattatcgttattaactattggtt 92  Q
    |||||||||||||||||| ||||||||||||||||    
T  43337757 ttattttatcaaattatctttattaactattggtt 43337791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 16493516 - 16493553
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  16493516 aagggttaataggtctttacctcctgtaatataggtca 16493553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19930810 - 19930757
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| |||||||||||||  || ||||||||||||||||||||    
T  19930810 tttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaag 19930757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 27579516 - 27579549
Alignment:
Q  145 gttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  27579516 gttaataggtctttaccccctgtaatataggtca 27579549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 36558298 - 36558335
Alignment:
Q  57 tttattttatcaaattatcgttattaactattggtttg 94  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  36558298 tttattttaccaaattatccttattaactattggtttg 36558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 52957851 - 52957904
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| |||||||||||||  || ||||||||||||||||||||    
T  52957851 tttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaag 52957904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 2032789 - 2032753
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  2032789 agggttaatagtattttaccccctgtaatataggtca 2032753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 10573216 - 10573268
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| ||| ||||||||  || ||||||||||||||||||||    
T  10573216 tttggaagtattgtatatagtattaattgaagggtacaattgaaaagaaaaag 10573268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 11364321 - 11364269
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| | || ||||||||||||  || ||||||||||||||||||||    
T  11364321 tttggaagtagtatatataatattaattgaagggtacaattgaaaagaaaaag 11364269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 19909383 - 19909347
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  19909383 agggttaatagtgttttaccccctgtaatataggtca 19909347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 25231270 - 25231218
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||||| | ||||||||| || ||||||| ||||||||||||    
T  25231270 tttggaagtagtgtacaaagtattaattatagggtacaatagaaaagaaaaag 25231218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 29104158 - 29104194
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  29104158 agggttaatagtgttttaccccctgtaatataggtca 29104194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 31226557 - 31226521
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  31226557 agggttaatagtgttttaccccctgtaatataggtca 31226521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 42605668 - 42605616
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaa 142  Q
    |||| |||||||||| |||||||||||||  || |||||||||||||||||||    
T  42605668 tttgaaagtaatgtaacataatattaattgaagggtacaattgaaaagaaaaa 42605616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 44868313 - 44868365
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| ||| ||||||||  |  ||||||||||||||||||||    
T  44868313 tttggaagtaatgtatatattattaattgaatggtacaattgaaaagaaaaag 44868365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 45839732 - 45839680
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| ||||||||||||  |  ||||||||||||| ||||||    
T  45839732 tttggaagtaatgtatataatattaattgaatggtacaattgaaaataaaaag 45839680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 47817833 - 47817781
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| ||| ||||||||  || ||||||||||||||||||||    
T  47817833 tttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaag 47817781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 48029410 - 48029450
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||  ||||||||||||||| |||||||    
T  48029410 aaaaagggttaataggcctttaccccctgtaatttaggtca 48029450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 52439334 - 52439374
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |  ||||||||||||||||||||||||    
T  52439334 aaaaagggttaatggtgttttaccccctgtaatataggtca 52439374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 52848115 - 52848167
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaa 142  Q
    |||||||||| |||| |||||||||||||  || |||||||||||||||||||    
T  52848115 tttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaa 52848167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 10545821 - 10545866
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  10545821 aaaagaaaaagggttaatagtgttttaccccctgtaatataggtca 10545866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 3063542 - 3063505
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  3063542 aagggttaataggtctttaccccctgtaatataggtca 3063505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 29942502 - 29942465
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29942502 aagggttaataggtctttaccccctgtaatataggtca 29942465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 5334643 - 5334678
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||||||||||||||||| ||||    
T  5334643 gggttaataggtttttaccccctgtaatataagtca 5334678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 10344050 - 10344085
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  10344050 gggttaataggtctttaccccctgtaatataggtca 10344085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 13114398 - 13114433
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  13114398 gggttaataggtctttaccccctgtaatataggtca 13114433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 14328703 - 14328668
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  14328703 gggttaataggtctttaccccctgtaatataggtca 14328668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 14421713 - 14421678
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  14421713 gggttaataggtctttaccccctgtaatataggtca 14421678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 31851754 - 31851793
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  31851754 aaaagggttaataggtctttatcccctgtaatataggtca 31851793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 56170 - 56137
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||| ||||||||||||||||||||    
T  56170 agggttaataggtctttaccccctgtaatatagg 56137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 22366277 - 22366240
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  22366277 aagggttaataggtctttaccccctgcaatataggtca 22366240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 22574089 - 22574056
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatatag 174  Q
    |||||||||||||| |||||||||||||||||||    
T  22574089 aagggttaataggtctttaccccctgtaatatag 22574056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 24062165 - 24062202
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  24062165 aagggttaataggtctttaccccctataatataggtca 24062202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 24387818 - 24387785
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggt 176  Q
    |||||||||||| |||||||||||||||||||||    
T  24387818 gggttaataggtctttaccccctgtaatataggt 24387785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 5827780 - 5827808
Alignment:
Q  108 taatattaattagagagtacaattgaaaa 136  Q
    |||||||||||||||||||||||||||||    
T  5827780 taatattaattagagagtacaattgaaaa 5827808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 8238034 - 8237998
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  8238034 agggttaatagtgttttaccccctgtaatataggtca 8237998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 12459376 - 12459428
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| ||| ||||||||  || ||| ||||||||||||||||    
T  12459376 tttggaagtaatgtatatagtattaattgaagggtataattgaaaagaaaaag 12459428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 16129489 - 16129529
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| || |||||||||||||||||| ||||    
T  16129489 aaaaagggttaataagtctttaccccctgtaatatatgtca 16129529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 22573801 - 22573837
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  22573801 agggttaataggtctttaccccctataatataggtca 22573837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 29964461 - 29964497
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  29964461 agggttaatagctttttatcccctgtaatataggtca 29964497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 91045 - 91085
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  91045 aaaaagggttaataggtctttaccccctgtaatataggtca 91085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 24555959 - 24555923
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||||||||||||||||    
T  24555959 agggttaataggtttttaccccctgtaatataggtca 24555923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 1594184 - 1594146
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1594184 aaagggttaataggtctttaccccctgtaatataggtca 1594146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 6269525 - 6269563
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  6269525 aaagggttaataggtctttaccccctgtaatataggtca 6269563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 48945181 - 48945219
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  48945181 aaagggttaataggtttttaccctctgtaatataggtca 48945219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 19272508 - 19272471
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  19272508 aagggttaataggtctttaccccctgtaatataggtca 19272471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 23784582 - 23784619
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23784582 aagggttaataggtctttaccccctgtaatataggtca 23784619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 42286070 - 42286022
Alignment:
Q  42 aaataaagagaattgtttattttatcaaattatcgttattaactattggt 91  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  42286070 aaataaagagaattgtt-attttaccaaattatccttattaactattggt 42286022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 13882598 - 13882638
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  13882598 aaaaagggttaataggtctttaccctctgtaatataggtca 13882638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 9915649 - 9915684
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggt 176  Q
    |||||||||||||| |||||||||||||||||||||    
T  9915649 aagggttaataggtctttaccccctgtaatataggt 9915684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 9923561 - 9923596
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggt 176  Q
    |||||||||||||| |||||||||||||||||||||    
T  9923561 aagggttaataggtctttaccccctgtaatataggt 9923596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 13279474 - 13279439
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  13279474 gggttaataggtctttaccccctgtaatataggtca 13279439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 23371449 - 23371484
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  23371449 gggttaataggtctttaccccctgtaatataggtca 23371484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 26050465 - 26050426
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtc 177  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  26050465 aaaaagggttaataggtctttaacccctgtaatataggtc 26050426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 26059824 - 26059785
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtc 177  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  26059824 aaaaagggttaataggtctttaacccctgtaatataggtc 26059785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 38193251 - 38193216
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  38193251 gggttaataggtctttaccccctgtaatataggtca 38193216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 39580223 - 39580188
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  39580223 gggttaataggtctttaccccctgtaatataggtca 39580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 9553398 - 9553432
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatatagg 175  Q
    |||||||||||||| ||||||||||||||||||||    
T  9553398 aagggttaataggtctttaccccctgtaatatagg 9553432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 10688455 - 10688493
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  10688455 aaagggttaataggtctttaccctctgtaatataggtca 10688493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 13797667 - 13797633
Alignment:
Q  144 ggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||| |||||||||||||||||||||||    
T  13797667 ggttaataggtctttaccccctgtaatataggtca 13797633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 21444243 - 21444205
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  21444243 aaagggttaatagtgttttaccccctgtaatataggtca 21444205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 33757407 - 33757445
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  33757407 aaagggttaatagatctttaccccctgtaatataggtca 33757445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 38192952 - 38192998
Alignment:
Q  133 aaaagaaaaagggttaataggttttta-ccccctgtaatataggtca 178  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||    
T  38192952 aaaaaaaaaagggttaataggtctttacccccctgtaatataggtca 38192998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 44567045 - 44567079
Alignment:
Q  58 ttattttatcaaattatcgttattaactattggtt 92  Q
    |||||||||||||||||| ||||||||||||||||    
T  44567045 ttattttatcaaattatccttattaactattggtt 44567079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 1676451 - 1676414
Alignment:
Q  142 agggttaataggtttttac-cccctgtaatataggtca 178  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  1676451 agggttaataggtttttacccccctgtaatataggtca 1676414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 20041194 - 20041157
Alignment:
Q  142 agggttaataggtttttac-cccctgtaatataggtca 178  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20041194 agggttaataggtttttacccccctgtaatataggtca 20041157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 20164482 - 20164445
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  20164482 aagggttaatagtgttttaccccctgtaatataggtca 20164445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 27947556 - 27947609
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| |||||||||||||  || ||||||||||||||||||||    
T  27947556 tttggaagtagtgtagcataatattaattgaagggtacaattgaaaagaaaaag 27947609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 32946284 - 32946321
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  32946284 aagggttaatagtattttaccccctgtaatataggtca 32946321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 39065381 - 39065418
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  39065381 aaggattaataggtctttaccccctgtaatataggtca 39065418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 45948685 - 45948738
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| |||| ||||||||  || ||||||||||||||||||||    
T  45948685 tttggaagtaatgtaacatagtattaattgaagggtacaattgaaaagaaaaag 45948738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 10476231 - 10476179
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| ||| ||||||||  || ||||||||||||||||||||    
T  10476231 tttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaag 10476179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 10980654 - 10980618
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  10980654 agggttaataggtctttaccctctgtaatataggtca 10980618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 12005260 - 12005296
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||||  |||||||||||||||||||||    
T  12005260 aaaagggttaatagtgttttaccccctgtaatatagg 12005296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 14554506 - 14554470
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||  |||||||||||||||||||||||    
T  14554506 agggttaataggcctttaccccctgtaatataggtca 14554470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 24478023 - 24478059
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  24478023 agggttaatagtgttttaccccctgtaatataggtca 24478059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 24845637 - 24845673
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  24845637 agggttaataggtctttacctcctgtaatataggtca 24845673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 25440967 - 25440915
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  25440967 tttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaag 25440915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 26050174 - 26050210
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  26050174 agggttaataggtctttaccccctctaatataggtca 26050210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 26059533 - 26059569
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  26059533 agggttaataggtctttaccccctctaatataggtca 26059569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 31186667 - 31186703
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  31186667 agggttaataggtctttaccctctgtaatataggtca 31186703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 32200140 - 32200100
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  32200140 aaaaagggttaacagtgttttaccccctgtaatataggtca 32200100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 35913342 - 35913310
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatag 174  Q
    ||||||||||||| |||||||||||||||||||    
T  35913342 agggttaataggtctttaccccctgtaatatag 35913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 42202156 - 42202196
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| |||||||||||| ||||||||||| |||||||||||    
T  42202156 aaaatgggttaataggtctttaccccctgcaatataggtca 42202196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 9751738 - 9751698
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  9751738 aaaaagggttaataggcttttaccccctgtaatataggtca 9751698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 17886088 - 17886043
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||    
T  17886088 aaaagaaatagggttaatagtattttaccccctgtaatataggtca 17886043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 29104442 - 29104479
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29104442 aagggttaataggtctttaccccctgtaatataggtca 29104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 38482316 - 38482353
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  38482316 aagggttaataggtctttaccccctgtaatataggtca 38482353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 3024989 - 3025041
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||||||| || | |||||||| ||| ||||||||||||||||||||    
T  3024989 tttggaagtaatgtgcagagtattaattggagggtacaattgaaaagaaaaag 3025041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 10976805 - 10976769
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10976805 agggttaataggtctttaccccctgtaatataggtca 10976769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 11977683 - 11977631
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| ||||||||||||| ||  |||||||||||||||||||    
T  11977683 tttggaagtagtgtatataatattaattaaaggatacaattgaaaagaaaaag 11977631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 15395543 - 15395579
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15395543 agggttaataggtttttaccccctgtaaaataggtca 15395579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 22551521 - 22551557
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22551521 agggttaataggtctttaccccctgtaatataggtca 22551557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 25962797 - 25962837
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  25962797 aaaaagggttaatagtgttttaccccctgtaatataggtca 25962837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 31312832 - 31312793
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  31312832 aaaagggttaatagtgttttaccccctgtaatataggtca 31312793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 4413924 - 4413962
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  4413924 aaagggttaatagtgttttaccccctgtaatataggtca 4413962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 12148286 - 12148248
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  12148286 aaagggttaatagtgttttaccccctgtaatataggtca 12148248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 31861488 - 31861526
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  31861488 aaagggttaataggtctttatcccctgtaatataggtca 31861526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 12399643 - 12399610
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggt 176  Q
    |||||||||||| |||||||||||||||||||||    
T  12399643 gggttaataggtctttaccccctgtaatataggt 12399610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 15061881 - 15061848
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||| ||||||||||||||||||||    
T  15061881 agggttaataggtctttaccccctgtaatatagg 15061848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 15615102 - 15615135
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||| ||||||||||||||||||||    
T  15615102 agggttaataggtctttaccccctgtaatatagg 15615135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 39504819 - 39504766
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| |||||||||||||| ||  |||||||||||||||||||    
T  39504819 tttggaagtagtgtaacataatattaattaaaggatacaattgaaaagaaaaag 39504766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 10344990 - 10345042
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  10344990 tttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaag 10345042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 15396528 - 15396492
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  15396528 agggttaataggcttttaccccctgtaatatatgtca 15396492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 20689082 - 20689050
Alignment:
Q  146 ttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||| |||||||||||||||||||||||    
T  20689082 ttaataggtctttaccccctgtaatataggtca 20689050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 21039864 - 21039900
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||  ||||||||||||||||||||||||    
T  21039864 agggttaatagtgttttaccccctgtaatataggtca 21039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 26034840 - 26034880
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||| ||||||| ||| |||||||||||    
T  26034840 aaaaagggttaataggtctttaccctctgcaatataggtca 26034880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 33052816 - 33052852
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  33052816 agggttaataggtctttaccccttgtaatataggtca 33052852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 36164982 - 36164930
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| ||| ||||||||  || ||| ||||||||||||||||    
T  36164982 tttggaagtaatgtatatagtattaattgaagggtataattgaaaagaaaaag 36164930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 38369967 - 38369915
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||| ||||| |||| ||||||||||||  ||||||||||| |||||||||||    
T  38369967 tttgaaagtagtgtatataatattaattgaagagtacaatttaaaagaaaaag 38369915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 39418760 - 39418796
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaa 169  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  39418760 aaaataaaaagggttaataggtctttaccccctgtaa 39418796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 28149723 - 28149688
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||||||||||||||||||||||    
T  28149723 gggttaataggtttttaccccctgtaatataggtca 28149688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 17328090 - 17328127
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17328090 aagggttaataggtctttaccccctgtaatataggtca 17328127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 6468053 - 6468093
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  6468053 aaaaagggttaataagtttttaccccctgtaatataagtca 6468093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 19493506 - 19493470
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19493506 agggttaataggtctttaccccctgtaatataggtca 19493470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 20182263 - 20182299
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||| ||||||||||||||||||    
T  20182263 agggttaataggtttttatcccctgtaatataggtca 20182299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 22116154 - 22116190
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22116154 agggttaataggtctttaccccctgtaatataggtca 22116190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 23260315 - 23260355
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  23260315 aaaaagggttaataggtctttactccctgtaatataggtca 23260355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 34635705 - 34635741
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34635705 agggttaataggtctttaccccctgtaatataggtca 34635741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 36525654 - 36525614
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  36525654 aaaaagggttaatagtgttttaccccctgtaatataggtca 36525614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 38385930 - 38385970
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  38385930 aaaaaaggttaataggtctttaccccctgtaatataggtca 38385970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 45464669 - 45464633
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||| ||||||||||||||||    
T  45464669 agggttaataggtttttacctcctgtaatataggtca 45464633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 19641446 - 19641481
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  19641446 gggttaataggtctttaccccctgtaatataggtca 19641481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 19840039 - 19840074
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  19840039 gggttaataggtctttaccccctgtaatataggtca 19840074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 22535450 - 22535489
Alignment:
Q  139 aaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  22535450 aaaagggttaataggtctttaccccctttaatataggtca 22535489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 29835102 - 29835137
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  29835102 gggttaataggtctttaccccctgtaatataggtca 29835137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 37147551 - 37147586
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  37147551 gggttaataggtctttaccccctgtaatataggtca 37147586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 3364621 - 3364583
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  3364621 aaagggttaataggtctttaccccctgtaatataagtca 3364583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 14286078 - 14286044
Alignment:
Q  58 ttattttatcaaattatcgttattaactattggtt 92  Q
    |||||||||||||||||| ||||||||||||||||    
T  14286078 ttattttatcaaattatccttattaactattggtt 14286044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 16577405 - 16577371
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggt 176  Q
    ||||||||||||| |||||||||||||||||||||    
T  16577405 agggttaataggtctttaccccctgtaatataggt 16577371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 19052233 - 19052195
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  19052233 aaagggttaataggtctttaccccctgtaatatatgtca 19052195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 23835831 - 23835797
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatatagg 175  Q
    |||||||||||||| ||||||||||||||||||||    
T  23835831 aagggttaataggtctttaccccctgtaatatagg 23835797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 35007950 - 35007912
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  35007950 aaagggttaataggattttaccccctgcaatataggtca 35007912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 38127760 - 38127798
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  38127760 aaagggttaatagtgttttaccccctgtaatataggtca 38127798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 16670494 - 16670531
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatatagg 175  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  16670494 aaaaaaggttaataggtctttaccccctgtaatatagg 16670531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 30371651 - 30371618
Alignment:
Q  145 gttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  30371651 gttaataggtctttaccccctgtaatataggtca 30371618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 38937566 - 38937533
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||| ||||||||||||||||||||    
T  38937566 agggttaataggtctttaccccctgtaatatagg 38937533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 43301882 - 43301915
Alignment:
Q  145 gttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  43301882 gttaataggtctttaccccctgtaatataggtca 43301915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 17695883 - 17695935
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  17695883 tttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaag 17695935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 28141683 - 28141723
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  28141683 aaaaaggattaatagatctttaccccctgtaatataggtca 28141723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 30371384 - 30371420
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  30371384 agggttaataggtctttactccctgtaatataggtca 30371420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 34404652 - 34404612
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  34404652 aaaaatggttaataggcttttaccccctgtaatatatgtca 34404612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 38210865 - 38210897
Alignment:
Q  144 ggttaataggtttttaccccctgtaatataggt 176  Q
    ||||||||||| |||||||||||||||||||||    
T  38210865 ggttaataggtctttaccccctgtaatataggt 38210897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 45081957 - 45082009
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaa 142  Q
    |||||||||| |||| |||||||||||||  || |||||||||||||||||||    
T  45081957 tttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaa 45082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 10075 - 10112
Alignment:
Q  138 aaaaagggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10075 aaaaagggttaataggtctttaccccctgtaatatagg 10112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 20737508 - 20737545
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  20737508 aagggttaataggtttttaccccctataatataggtca 20737545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 36729864 - 36729917
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  36729864 tttggaagtaatgtaacataatattaattgaagggtacaattgaaaagaaaaag 36729917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 51460822 - 51460785
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||||||||||||||||||    
T  51460822 aagggttaataggtctttaccccctgtaatataggtca 51460785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 3986019 - 3985972
Alignment:
Q  46 aaagagaattgtttattttatcaaattatcgttattaactattggtttg 94  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  3986019 aaagagaatt-tttattttaccaaattatccttattaactattggtttg 3985972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 6510214 - 6510250
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6510214 agggttaataggtctttaccccctgtaatataggtca 6510250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 12066228 - 12066264
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12066228 agggttaatagttttttaccccctgtaatataggtca 12066264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 49873007 - 49872971
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  49873007 agggttaataggtctttaccccctgtaatataggtca 49872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 37977566 - 37977531
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37977566 aaagggttaataggtctttaccccctgtaatatagg 37977531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 47115619 - 47115584
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  47115619 gggttaataggtctttaccccctgtaatataggtca 47115584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 49880794 - 49880759
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  49880794 gggttaataggtctttaccccctgtaatataggtca 49880759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 54567800 - 54567765
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  54567800 gggttaataggtctttaccccctgtaatataggtca 54567765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 5205114 - 5205152
Alignment:
Q  141 aagggttaataggttttta-ccccctgtaatataggtca 178  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5205114 aagggttaataggtttttacccccctgtaatataggtca 5205152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 27497796 - 27497834
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  27497796 aaagggttaataggtctttaccccctgtaatataagtca 27497834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 27760286 - 27760324
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| || |||||||||||||||||||||||    
T  27760286 aaagggttaataagtctttaccccctgtaatataggtca 27760324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 30586152 - 30586198
Alignment:
Q  133 aaaagaaaaagggttaataggttttta-ccccctgtaatataggtca 178  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||    
T  30586152 aaaagaaatagggttaataggtctttacccccctgtaatataggtca 30586198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 4699970 - 4700011
Alignment:
Q  138 aaaaagggttaataggtttttacc-ccctgtaatataggtca 178  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  4699970 aaaaagggttaataggtctttacctccctgtaatataggtca 4700011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 5205413 - 5205376
Alignment:
Q  142 agggttaataggtttttac-cccctgtaatataggtca 178  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  5205413 agggttaataggtttttacccccctgtaatataggtca 5205376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 14241212 - 14241249
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  14241212 aagggtttataggtctttaccccctgtaatataggtca 14241249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 18140938 - 18140975
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  |||||||||||||||||||||||    
T  18140938 aagggttaataggcctttaccccctgtaatataggtca 18140975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 18142256 - 18142219
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||  |||||||||||||||||||||||    
T  18142256 aagggttaataggcctttaccccctgtaatataggtca 18142219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 20957228 - 20957195
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatatag 174  Q
    |||||||||||||| |||||||||||||||||||    
T  20957228 aagggttaataggtctttaccccctgtaatatag 20957195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 22949248 - 22949281
Alignment:
Q  145 gttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  22949248 gttaataggtctttaccccctgtaatataggtca 22949281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 25110120 - 25110083
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  25110120 aagggttaataggtctttacaccctgtaatataggtca 25110083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 41287550 - 41287603
Alignment:
Q  91 tttggaagtaatgta-cataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||||||| |||||||||||||  || ||| ||||||||||||||||    
T  41287550 tttggaagtaatgtaacataatattaattgaagggtataattgaaaagaaaaag 41287603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 46597566 - 46597533
Alignment:
Q  142 agggttaataggtttttaccccctgtaatatagg 175  Q
    ||||||||||||| ||||||||||||||||||||    
T  46597566 agggttaataggtctttaccccctgtaatatagg 46597533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 47117621 - 47117576
Alignment:
Q  133 aaaagaaaaagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||| |||||| |||||||||| |||||||| ||||||||||||||    
T  47117621 aaaaaaaaaagagttaataggtctttaccccttgtaatataggtca 47117576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 51252347 - 51252306
Alignment:
Q  138 aaaaagggttaataggttttta-ccccctgtaatataggtca 178  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  51252347 aaaaagggttaataggtctttatccccctgtaatataggtca 51252306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 53806855 - 53806818
Alignment:
Q  141 aagggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  53806855 aagggttaataggtctttaccccttgtaatataggtca 53806818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 5417320 - 5417288
Alignment:
Q  146 ttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||| ||||||||||||||||    
T  5417320 ttaataggtttttacctcctgtaatataggtca 5417288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 8827479 - 8827447
Alignment:
Q  146 ttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||| |||||||||||||||||||||||    
T  8827479 ttaataggtctttaccccctgtaatataggtca 8827447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 22857181 - 22857133
Alignment:
Q  95 gaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||| |||| ||||||||||||  | |||||||||||||||||||||    
T  22857181 gaagtagtgtatataatattaattgaacagtacaattgaaaagaaaaag 22857133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 42072076 - 42072028
Alignment:
Q  95 gaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||| ||||||||||||  || ||||| ||||||||||||||    
T  42072076 gaagtaatgtatataatattaattgaagggtacagttgaaaagaaaaag 42072028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 42571584 - 42571636
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  42571584 tttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaag 42571636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 46610009 - 46610041
Alignment:
Q  143 gggttaataggtttttaccccctgtaatatagg 175  Q
    |||||||||||| ||||||||||||||||||||    
T  46610009 gggttaataggtctttaccccctgtaatatagg 46610041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 50646169 - 50646217
Alignment:
Q  95 gaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    ||||||||||| ||| ||||||||| |  ||||||||||||||||||||    
T  50646169 gaagtaatgtatatagtattaattaaatggtacaattgaaaagaaaaag 50646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 4209 - 4173
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4209 agggttaataggtctttaccccctgtaatataggtca 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 744 - 795
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaa 142  Q
    ||||||| || |||| ||||||||||||| || |||||||||||||||||||    
T  744 tttggaattagtgtatataatattaattaaagggtacaattgaaaagaaaaa 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 4484 - 4449
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  4484 gggttaataggtctttaccccctgtaatataggtca 4449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 4246 - 4284
Alignment:
Q  140 aaagggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  4246 aaagggttaataggtctttactccctgtaatataggtca 4284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 34883 - 34848
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  34883 gggttaataggtctttaccccctgtaatataggtca 34848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 1827 - 1862
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  1827 gggttaataggtctttaccccctgtaatataggtca 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 26308 - 26343
Alignment:
Q  143 gggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  26308 gggttaataggtctttaccccctgtaatataggtca 26343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 629 - 681
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| |||| ||||||||||||  || |||||||| |||||||||||    
T  629 tttggaagtagtgtatataatattaattgaagggtacaattaaaaagaaaaag 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 7858 - 7894
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  7858 agggttaataggtctttaccccctgtaatatatgtca 7894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 8153 - 8117
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  8153 agggttaataggtctttacccactgtaatataggtca 8117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 3868 - 3920
Alignment:
Q  91 tttggaagtaatgtacataatattaattagagagtacaattgaaaagaaaaag 143  Q
    |||||||||| ||| || | |||||||| ||| ||||||||||||||||||||    
T  3868 tttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaag 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 694 - 658
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  694 agggttaataggtctttaccctctgtaatataggtca 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 10354 - 10390
Alignment:
Q  142 agggttaataggtttttaccccctgtaatataggtca 178  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  10354 agggttaataggtttttaccccctctaatataagtca 10390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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