View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17166_high_94 (Length: 250)
Name: NF17166_high_94
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17166_high_94 |
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Alignment Details
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 35205121 - 35205358
Alignment:
| Q |
1 |
aggttctttaatttgctaatgcatgcatgtcatacatacaccttaatcatatatttaatgatataaacctaatacatatgcatctctctaatctcttata |
100 |
Q |
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| T |
35205121 |
aggttctttaatttgctaatgcatgcatgtcatacatacaccttaatcatagatttaatgatataaacctaatacatatgcatctctctactctcttata |
35205220 |
T |
|
| Q |
101 |
aataattcaattctaacaattcaacnnnnnnncactaattaagcgataagtgttagtatttctatcaaagagnnnnnnnnnnnnnnnnnnnnngaattag |
200 |
Q |
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|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| |
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| T |
35205221 |
c----ttcaattctaacaattcaacaaaaaaacactaattaagcgata-gtgttagtatttctatcaaagagtttttttgttttttaatttttgaattag |
35205315 |
T |
|
| Q |
201 |
tggaacagaagataaaagagaaaataagcttcaatattcttcg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35205316 |
tggaacagaagataaaagagaaaataagcttcaatattcttcg |
35205358 |
T |
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