View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17166_low_102 (Length: 244)
Name: NF17166_low_102
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17166_low_102 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 34340605 - 34340378
Alignment:
| Q |
1 |
caaggtacaaattcctatccctatacttatgcttcatatgatcttttcgacttgtatatgtctgttgattataattgctttccaaaatttcaaacagtat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34340605 |
caaggtacaaattcctatccctatacttatgcttcatatgatcttttcgacttgtatatgtctgttgattataattgctttccaaaatttcaaacagtat |
34340506 |
T |
|
| Q |
101 |
atctccctcattcaatcagcgagttcatatttcttaggagttgtgaatatgcgtagacagcaaataaacggaatatgataatgttttaagtgcggagtga |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34340505 |
atctccctcattcaatcagcgagttcatatttcttaggagttgtgaatatgcgtagacagcaaataaacggaatatgataatgttttaagtgcggagtga |
34340406 |
T |
|
| Q |
201 |
agctaacctcggaatgacaggatcttga |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34340405 |
agctaacctcggaatgacaggatcttga |
34340378 |
T |
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