View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17166_low_106 (Length: 240)

Name: NF17166_low_106
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17166_low_106
NF17166_low_106
[»] chr3 (50 HSPs)
chr3 (109-226)||(28226413-28226530)
chr3 (103-226)||(35077367-35077490)
chr3 (103-226)||(47843981-47844104)
chr3 (103-226)||(53290904-53291027)
chr3 (103-226)||(24569530-24569653)
chr3 (155-226)||(40113390-40113461)
chr3 (149-226)||(35458647-35458724)
chr3 (102-201)||(2642689-2642788)
chr3 (103-201)||(20848887-20848985)
chr3 (103-201)||(23771267-23771365)
chr3 (100-201)||(47104323-47104424)
chr3 (149-201)||(51697732-51697784)
chr3 (103-195)||(34750635-34750727)
chr3 (149-226)||(790576-790653)
chr3 (149-226)||(34266581-34266658)
chr3 (149-201)||(42515340-42515392)
chr3 (102-194)||(1201042-1201134)
chr3 (157-226)||(20105226-20105295)
chr3 (157-226)||(32854091-32854160)
chr3 (157-226)||(43554424-43554493)
chr3 (157-226)||(48152019-48152088)
chr3 (157-226)||(48214101-48214170)
chr3 (149-201)||(36234393-36234445)
chr3 (157-201)||(41926711-41926755)
chr3 (157-201)||(53745449-53745493)
chr3 (157-201)||(54106297-54106341)
chr3 (149-201)||(54334351-54334403)
chr3 (157-201)||(54911469-54911513)
chr3 (157-198)||(2154210-2154251)
chr3 (149-226)||(6902304-6902381)
chr3 (149-201)||(13158607-13158660)
chr3 (103-201)||(17102734-17102832)
chr3 (157-226)||(19550280-19550349)
chr3 (157-226)||(27483929-27483998)
chr3 (157-226)||(45513758-45513827)
chr3 (157-226)||(47070000-47070069)
chr3 (157-201)||(24232-24276)
chr3 (157-201)||(7328489-7328533)
chr3 (149-201)||(27028183-27028235)
chr3 (157-201)||(27039774-27039818)
chr3 (157-201)||(33491307-33491351)
chr3 (157-201)||(43775558-43775602)
chr3 (149-201)||(44544337-44544389)
chr3 (157-201)||(45145163-45145207)
chr3 (157-201)||(50091979-50092023)
chr3 (157-201)||(51219252-51219296)
chr3 (157-201)||(51244658-51244702)
chr3 (157-201)||(52173781-52173825)
chr3 (157-201)||(52175754-52175798)
chr3 (157-201)||(54898254-54898298)
[»] chr4 (74 HSPs)
chr4 (102-226)||(34603606-34603730)
chr4 (103-226)||(14949222-14949345)
chr4 (103-226)||(38009904-38010027)
chr4 (103-226)||(48087681-48087804)
chr4 (102-226)||(1391309-1391433)
chr4 (103-226)||(18091225-18091348)
chr4 (149-226)||(14090269-14090346)
chr4 (103-226)||(30151967-30152090)
chr4 (101-201)||(6150675-6150775)
chr4 (102-226)||(8457049-8457173)
chr4 (102-201)||(9220204-9220303)
chr4 (102-201)||(55430466-55430565)
chr4 (103-201)||(3802143-3802241)
chr4 (149-202)||(56499776-56499829)
chr4 (149-201)||(1181064-1181116)
chr4 (149-201)||(30939184-30939236)
chr4 (161-201)||(51347303-51347343)
chr4 (103-195)||(48510038-48510130)
chr4 (102-201)||(52677308-52677407)
chr4 (157-226)||(3036422-3036491)
chr4 (157-226)||(13629331-13629400)
chr4 (103-201)||(20294267-20294365)
chr4 (103-201)||(41813625-41813723)
chr4 (157-226)||(46871958-46872027)
chr4 (157-226)||(47428566-47428635)
chr4 (157-226)||(48782237-48782306)
chr4 (157-201)||(3436230-3436274)
chr4 (157-201)||(12252137-12252181)
chr4 (157-201)||(16464945-16464989)
chr4 (149-201)||(19093316-19093368)
chr4 (157-201)||(19527371-19527415)
chr4 (157-201)||(21044910-21044954)
chr4 (157-201)||(23623658-23623702)
chr4 (157-201)||(26620514-26620558)
chr4 (154-226)||(26915963-26916035)
chr4 (157-201)||(27492396-27492440)
chr4 (157-201)||(31862149-31862193)
chr4 (157-201)||(33755245-33755289)
chr4 (149-201)||(35381578-35381630)
chr4 (149-201)||(37394322-37394374)
chr4 (154-202)||(43086439-43086487)
chr4 (157-201)||(44014076-44014120)
chr4 (149-201)||(44217735-44217787)
chr4 (157-201)||(44549680-44549724)
chr4 (149-201)||(50623443-50623495)
chr4 (157-201)||(55147224-55147268)
chr4 (149-201)||(55935136-55935188)
chr4 (103-199)||(37551830-37551926)
chr4 (150-201)||(52257954-52258005)
chr4 (154-201)||(54029132-54029179)
chr4 (102-201)||(42133019-42133118)
chr4 (157-226)||(22678447-22678516)
chr4 (149-226)||(22828539-22828616)
chr4 (157-226)||(38617445-38617514)
chr4 (149-226)||(42099737-42099814)
chr4 (157-226)||(44069068-44069137)
chr4 (149-226)||(53125376-53125453)
chr4 (149-201)||(1146212-1146264)
chr4 (157-201)||(4201481-4201525)
chr4 (157-201)||(5374513-5374557)
chr4 (157-201)||(6195061-6195105)
chr4 (157-201)||(16664278-16664322)
chr4 (157-201)||(23719947-23719991)
chr4 (157-201)||(29295391-29295435)
chr4 (149-201)||(34925505-34925557)
chr4 (157-201)||(35231727-35231771)
chr4 (157-201)||(38617853-38617897)
chr4 (157-201)||(39671362-39671406)
chr4 (157-201)||(40411980-40412024)
chr4 (149-201)||(41415036-41415088)
chr4 (157-201)||(42513189-42513233)
chr4 (149-201)||(47251442-47251494)
chr4 (157-201)||(53599949-53599993)
chr4 (157-201)||(56576266-56576310)
[»] chr2 (48 HSPs)
chr2 (106-226)||(42088877-42088997)
chr2 (109-226)||(838210-838327)
chr2 (108-226)||(36173053-36173171)
chr2 (151-226)||(42263643-42263718)
chr2 (103-226)||(33947569-33947692)
chr2 (103-226)||(37353969-37354092)
chr2 (103-201)||(928196-928294)
chr2 (103-201)||(32854945-32855043)
chr2 (149-201)||(30544546-30544598)
chr2 (149-196)||(18904081-18904128)
chr2 (102-201)||(45065051-45065150)
chr2 (149-226)||(11560187-11560264)
chr2 (149-201)||(11222481-11222533)
chr2 (149-201)||(37660170-37660222)
chr2 (157-226)||(479113-479182)
chr2 (157-226)||(13753989-13754058)
chr2 (149-226)||(25558324-25558400)
chr2 (157-226)||(26342614-26342683)
chr2 (157-226)||(28145712-28145781)
chr2 (152-201)||(37116758-37116807)
chr2 (149-202)||(38148199-38148252)
chr2 (157-201)||(3363618-3363662)
chr2 (157-201)||(10812233-10812277)
chr2 (157-201)||(13215427-13215471)
chr2 (110-195)||(25787324-25787409)
chr2 (149-201)||(28967396-28967448)
chr2 (149-201)||(44360460-44360512)
chr2 (157-226)||(14288465-14288534)
chr2 (157-226)||(14295897-14295966)
chr2 (149-226)||(15183141-15183218)
chr2 (157-226)||(32543927-32543996)
chr2 (160-201)||(36375608-36375649)
chr2 (157-226)||(37093484-37093553)
chr2 (157-226)||(38186192-38186261)
chr2 (157-226)||(41885659-41885728)
chr2 (157-201)||(2012895-2012939)
chr2 (157-201)||(4883637-4883681)
chr2 (157-201)||(6013509-6013553)
chr2 (149-201)||(9370000-9370052)
chr2 (157-201)||(9706821-9706865)
chr2 (157-201)||(13849880-13849924)
chr2 (157-201)||(14541365-14541409)
chr2 (157-201)||(15893745-15893789)
chr2 (149-201)||(31025105-31025157)
chr2 (157-201)||(34309215-34309259)
chr2 (157-201)||(34357212-34357256)
chr2 (149-201)||(36405007-36405059)
chr2 (157-201)||(43077326-43077370)
[»] chr8 (57 HSPs)
chr8 (103-226)||(6660933-6661056)
chr8 (103-226)||(6741335-6741458)
chr8 (18-104)||(14258695-14258781)
chr8 (103-226)||(13132253-13132376)
chr8 (103-226)||(45317632-45317755)
chr8 (102-226)||(30205439-30205563)
chr8 (149-226)||(40608061-40608138)
chr8 (103-201)||(11163246-11163344)
chr8 (149-226)||(11993919-11993996)
chr8 (111-201)||(41890510-41890600)
chr8 (149-201)||(38074302-38074354)
chr8 (102-201)||(3720659-3720758)
chr8 (149-226)||(31760164-31760241)
chr8 (149-226)||(40602894-40602971)
chr8 (157-201)||(3513391-3513435)
chr8 (149-201)||(13327805-13327857)
chr8 (157-201)||(40228329-40228373)
chr8 (103-226)||(34046831-34046954)
chr8 (152-201)||(8672331-8672380)
chr8 (157-226)||(9954683-9954752)
chr8 (149-226)||(11707622-11707699)
chr8 (103-201)||(17718483-17718581)
chr8 (157-226)||(34981863-34981932)
chr8 (149-226)||(35498207-35498284)
chr8 (157-201)||(167639-167683)
chr8 (157-201)||(2456272-2456316)
chr8 (149-201)||(15596370-15596422)
chr8 (157-201)||(23429943-23429987)
chr8 (157-201)||(23848718-23848762)
chr8 (157-201)||(33935222-33935266)
chr8 (157-201)||(35052087-35052131)
chr8 (149-201)||(36058259-36058311)
chr8 (157-201)||(38482954-38482998)
chr8 (157-201)||(45281539-45281583)
chr8 (157-226)||(1202581-1202650)
chr8 (157-226)||(12763468-12763537)
chr8 (160-201)||(33314581-33314622)
chr8 (149-198)||(37998275-37998324)
chr8 (157-226)||(43553073-43553142)
chr8 (157-201)||(2335467-2335511)
chr8 (157-201)||(4057322-4057366)
chr8 (157-201)||(6750649-6750693)
chr8 (157-201)||(6757440-6757484)
chr8 (157-201)||(8730989-8731033)
chr8 (149-201)||(8954861-8954913)
chr8 (149-201)||(9301705-9301757)
chr8 (149-201)||(12342776-12342828)
chr8 (157-201)||(14228483-14228527)
chr8 (157-201)||(14263578-14263622)
chr8 (157-201)||(16656735-16656779)
chr8 (149-201)||(19972305-19972357)
chr8 (149-201)||(21020476-21020528)
chr8 (149-201)||(23793437-23793489)
chr8 (157-201)||(31028688-31028732)
chr8 (157-201)||(39303678-39303722)
chr8 (157-201)||(40521406-40521450)
chr8 (157-201)||(43642151-43642195)
[»] chr1 (45 HSPs)
chr1 (103-226)||(52825257-52825380)
chr1 (103-226)||(52759008-52759131)
chr1 (168-224)||(6931157-6931213)
chr1 (103-201)||(36318333-36318431)
chr1 (157-226)||(45226711-45226780)
chr1 (157-201)||(1039526-1039570)
chr1 (157-201)||(1046432-1046476)
chr1 (100-201)||(10675879-10675980)
chr1 (157-201)||(13507804-13507848)
chr1 (157-201)||(13514992-13515036)
chr1 (113-201)||(50152423-50152511)
chr1 (103-218)||(32168454-32168569)
chr1 (157-202)||(1038117-1038162)
chr1 (157-202)||(1045023-1045068)
chr1 (157-226)||(30686445-30686514)
chr1 (157-201)||(1024590-1024634)
chr1 (157-201)||(8464608-8464652)
chr1 (149-201)||(11248807-11248859)
chr1 (157-201)||(28679055-28679099)
chr1 (149-201)||(31588898-31588950)
chr1 (157-201)||(32994628-32994672)
chr1 (157-201)||(35483938-35483982)
chr1 (157-201)||(35531454-35531498)
chr1 (157-201)||(37437212-37437256)
chr1 (157-201)||(43952822-43952866)
chr1 (149-201)||(44182786-44182838)
chr1 (157-201)||(50825731-50825775)
chr1 (150-201)||(13699201-13699252)
chr1 (157-226)||(7782985-7783054)
chr1 (157-226)||(10506847-10506916)
chr1 (157-226)||(19349513-19349582)
chr1 (157-226)||(32348012-32348081)
chr1 (157-226)||(35700509-35700578)
chr1 (103-201)||(51613391-51613489)
chr1 (157-201)||(4101068-4101112)
chr1 (157-201)||(9362007-9362051)
chr1 (157-201)||(12124678-12124722)
chr1 (157-201)||(13566710-13566754)
chr1 (157-201)||(15660621-15660665)
chr1 (157-201)||(19455558-19455602)
chr1 (157-201)||(21927855-21927899)
chr1 (194-226)||(22154741-22154773)
chr1 (157-201)||(35605492-35605536)
chr1 (157-201)||(38648491-38648535)
chr1 (149-201)||(45368114-45368166)
[»] chr7 (37 HSPs)
chr7 (103-226)||(9602033-9602156)
chr7 (103-226)||(9829604-9829727)
chr7 (102-226)||(33071886-33072009)
chr7 (151-226)||(35859995-35860070)
chr7 (103-201)||(3177910-3178008)
chr7 (103-201)||(8966065-8966163)
chr7 (103-176)||(8921026-8921099)
chr7 (157-201)||(41675351-41675395)
chr7 (152-201)||(22382237-22382286)
chr7 (157-226)||(31430593-31430662)
chr7 (157-201)||(3837896-3837940)
chr7 (157-201)||(6799157-6799201)
chr7 (149-201)||(12838243-12838295)
chr7 (157-201)||(17354191-17354235)
chr7 (157-201)||(18470341-18470385)
chr7 (157-201)||(29497699-29497743)
chr7 (157-201)||(33173841-33173885)
chr7 (157-200)||(2408827-2408870)
chr7 (150-201)||(36922266-36922317)
chr7 (103-226)||(48981519-48981643)
chr7 (154-208)||(27235430-27235484)
chr7 (103-226)||(33099973-33100096)
chr7 (102-217)||(46715451-46715566)
chr7 (157-226)||(17896663-17896732)
chr7 (150-226)||(7312644-7312720)
chr7 (157-201)||(20035082-20035126)
chr7 (157-201)||(20045493-20045537)
chr7 (149-201)||(22950983-22951035)
chr7 (157-201)||(26632345-26632389)
chr7 (157-201)||(31399096-31399140)
chr7 (157-201)||(32528493-32528537)
chr7 (157-201)||(33257915-33257959)
chr7 (157-201)||(33921939-33921983)
chr7 (157-201)||(34368824-34368868)
chr7 (149-201)||(36298339-36298391)
chr7 (157-201)||(36406785-36406829)
chr7 (157-201)||(41891304-41891348)
[»] chr5 (55 HSPs)
chr5 (101-226)||(13957294-13957419)
chr5 (149-226)||(4440097-4440174)
chr5 (149-226)||(36481083-36481160)
chr5 (108-201)||(21150459-21150552)
chr5 (108-201)||(21157600-21157693)
chr5 (102-201)||(18393130-18393229)
chr5 (157-226)||(4175614-4175683)
chr5 (157-226)||(9076087-9076156)
chr5 (149-226)||(18794791-18794868)
chr5 (149-201)||(25785915-25785967)
chr5 (157-201)||(28024418-28024462)
chr5 (157-226)||(1088067-1088136)
chr5 (103-201)||(4608986-4609084)
chr5 (149-226)||(7579802-7579879)
chr5 (149-226)||(10359369-10359446)
chr5 (149-202)||(26906499-26906552)
chr5 (149-226)||(36239466-36239543)
chr5 (103-201)||(40927115-40927213)
chr5 (157-201)||(4962345-4962389)
chr5 (149-201)||(6007891-6007943)
chr5 (149-201)||(11413689-11413741)
chr5 (149-201)||(18020927-18020979)
chr5 (149-201)||(19831699-19831751)
chr5 (157-201)||(32389002-32389046)
chr5 (149-201)||(34261320-34261372)
chr5 (149-201)||(37633684-37633736)
chr5 (157-201)||(38017436-38017480)
chr5 (157-201)||(38363207-38363251)
chr5 (149-201)||(38910282-38910334)
chr5 (159-201)||(4427565-4427607)
chr5 (168-202)||(6330820-6330854)
chr5 (149-226)||(4985309-4985386)
chr5 (157-226)||(6072468-6072537)
chr5 (157-226)||(12664874-12664943)
chr5 (149-226)||(14793924-14794001)
chr5 (157-226)||(25027858-25027927)
chr5 (157-226)||(31802804-31802873)
chr5 (157-201)||(1795276-1795320)
chr5 (157-201)||(4688957-4689001)
chr5 (161-201)||(6689619-6689659)
chr5 (157-201)||(6754338-6754382)
chr5 (157-201)||(12870058-12870102)
chr5 (169-201)||(16124419-16124451)
chr5 (157-201)||(21606417-21606461)
chr5 (157-201)||(26854253-26854297)
chr5 (157-201)||(28463544-28463588)
chr5 (157-201)||(32440071-32440115)
chr5 (153-201)||(37306858-37306906)
chr5 (153-201)||(37809771-37809819)
chr5 (157-201)||(38160308-38160352)
chr5 (157-201)||(38297775-38297819)
chr5 (157-201)||(39073060-39073104)
chr5 (157-201)||(40198804-40198848)
chr5 (157-201)||(42394287-42394331)
chr5 (157-201)||(42911566-42911610)
[»] scaffold0002 (2 HSPs)
scaffold0002 (151-226)||(492478-492553)
scaffold0002 (149-201)||(148328-148381)
[»] scaffold0135 (1 HSPs)
scaffold0135 (102-201)||(30855-30954)
[»] chr6 (24 HSPs)
chr6 (102-201)||(19811935-19812034)
chr6 (157-201)||(12732210-12732254)
chr6 (99-218)||(24356200-24356319)
chr6 (103-201)||(11000972-11001070)
chr6 (157-201)||(7235474-7235518)
chr6 (149-201)||(22784831-22784883)
chr6 (153-201)||(30388751-30388799)
chr6 (149-227)||(30416212-30416290)
chr6 (103-218)||(32251096-32251211)
chr6 (157-226)||(9838260-9838329)
chr6 (157-201)||(3849099-3849143)
chr6 (157-201)||(17124146-17124190)
chr6 (149-201)||(22050075-22050127)
chr6 (157-201)||(24663413-24663457)
chr6 (157-201)||(33260734-33260778)
chr6 (149-201)||(34378885-34378937)
chr6 (157-226)||(17193192-17193261)
chr6 (157-201)||(7170186-7170230)
chr6 (157-201)||(8992582-8992626)
chr6 (157-201)||(9017029-9017073)
chr6 (157-201)||(11431320-11431364)
chr6 (157-201)||(17251419-17251463)
chr6 (149-201)||(24635734-24635786)
chr6 (157-201)||(26470886-26470930)
[»] scaffold0003 (1 HSPs)
scaffold0003 (103-201)||(252574-252672)
[»] scaffold0006 (1 HSPs)
scaffold0006 (105-201)||(96224-96320)
[»] scaffold0831 (1 HSPs)
scaffold0831 (150-201)||(2834-2885)
[»] scaffold0009 (1 HSPs)
scaffold0009 (157-218)||(147274-147335)
[»] scaffold1213 (1 HSPs)
scaffold1213 (157-201)||(130-174)
[»] scaffold0280 (1 HSPs)
scaffold0280 (149-201)||(8180-8232)
[»] scaffold0036 (1 HSPs)
scaffold0036 (149-201)||(23162-23214)
[»] scaffold0024 (1 HSPs)
scaffold0024 (157-201)||(49181-49225)
[»] scaffold0325 (1 HSPs)
scaffold0325 (103-201)||(295-393)
[»] scaffold0192 (1 HSPs)
scaffold0192 (157-226)||(14859-14928)
[»] scaffold0172 (1 HSPs)
scaffold0172 (149-226)||(26265-26342)
[»] scaffold0886 (1 HSPs)
scaffold0886 (157-201)||(4550-4594)
[»] scaffold0014 (1 HSPs)
scaffold0014 (157-201)||(195901-195945)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 28226413 - 28226530
Alignment:
Q  109 ctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctata 208  Q
    |||||||| ||||||| ||||||||||||||||       ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  28226413 ctccgttcctttataactgtcgcttttacataaattttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgttgtttttcctata 28226512  T
Q  209 atgcccttagtaatttat 226  Q
    ||||||||||||||||||    
T  28226513 atgcccttagtaatttat 28226530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 35077367 - 35077490
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| |||||||| ||       ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  35077367 tactccctccgttcctttataactgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgttgttttt 35077466  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||| ||||||||||||||    
T  35077467 cctataatgtccttagtaatttat 35077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 47844104 - 47843981
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| |||||||||||        |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  47844104 tactccctccgttcctttataactgtcacttttacataaattttttatttctaattaactgtcactttcaaagttcaatgtaatattaaatgttgttttt 47844005  T
Q  203 tctataatgcccttagtaatttat 226  Q
     ||||||| || ||||||||||||    
T  47844004 cctataataccgttagtaatttat 47843981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 53291027 - 53290904
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| || ||||||||       |||| ||||||| |||| ||||||||||| |||||||||||||||||| |||||    
T  53291027 tactccctccgttcctttataactgtcactcttacataatttttttgtttttaattaagtgtcactttcaaagttcaatgtaacattaaatgttattttt 53290928  T
Q  203 tctataatgcccttagtaatttat 226  Q
    ||||||||||||||| ||||||||    
T  53290927 tctataatgcccttaataatttat 53290904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 24569530 - 24569653
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||  ||||||||||||||||||||||||       |||||||||||| |||  ||||||||||| ||||||| |||||||||| |||||    
T  24569530 tactccctccgtttctttataattgtcgcttttacataatttttttgtttctaattaattgttactttcaaagttcaatgtaatattaaatgttattttt 24569629  T
Q  203 tctataatgcccttagtaatttat 226  Q
     ||||||||| |||| ||||||||    
T  24569630 cctataatgctcttaataatttat 24569653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 40113461 - 40113390
Alignment:
Q  155 aattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  40113461 aattaactgtcactttcaaagttcaatgtaacattaaatgttgttttttctataaagcccttaataatttat 40113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 35458724 - 35458647
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||| |||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  35458724 gtttttaattaactgtcactttcaaagttcaatgtgacattaaatgttgtttttcctataaagcccttagtaatttat 35458647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 2642689 - 2642788
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| ||||||||| ||| |||||||| | ||| |||||       ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  2642689 ttacttcctccgttcctttttaattgtcacatttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 2642788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 20848985 - 20848887
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| |||||||||||| |||||| | ||       ||| ||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  20848985 tactccctccgttcctttataattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 20848887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 23771267 - 23771365
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||||||||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||| |||||||||| |||||||    
T  23771267 tacttcctccgttcctttttaattgtcacttttgcataaaatttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatattgtttt 23771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 47104424 - 47104323
Alignment:
Q  100 atttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtt 199  Q
    ||||||||||||||||| ||| |||||||| |||||| | ||       ||| ||| ||||||||| ||||||||||| |||| ||||||||||||||||    
T  47104424 atttactccctccgttcctttttaattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtt 47104325  T
Q  200 tt 201  Q
    ||    
T  47104324 tt 47104323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 51697784 - 51697732
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  51697784 gtttctatttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 51697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 34750635 - 34750727
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgt 195  Q
    |||||| ||||||| |||||||||||| ||||| |||||       |||||||||||||||||  |||||||||| |||||| ||||||||||    
T  34750635 tactccttccgttcctttataattgtcacttttgcataaaaattttgtttctaattaactgtcgttttcaaagttcaatgtatcattaaatgt 34750727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 790576 - 790653
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  790576 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 790653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 34266658 - 34266581
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| |||||||||  |||||||||| |||| |||||||||||||||||| || ||| || ||||||| ||||||    
T  34266658 gtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttatcaatattgtccttagttatttat 34266581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 42515392 - 42515340
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  42515392 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 42515340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 1201042 - 1201134
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatg 194  Q
    ||||||||||||||| ||| |||||||| | ||| |||||       ||||||||||||||||| ||||||||||| |||  |||||||||||    
T  1201042 ttactccctccgttcctttttaattgtcacatttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatg 1201134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 20105226 - 20105295
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  20105226 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 20105295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 32854160 - 32854091
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||| || | | | |||||||| ||||||    
T  32854160 ttaactgtcactttcaaagttcaatgtaacaataaatgttgttttatcaacattacccttagttatttat 32854091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 43554424 - 43554493
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  43554424 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 43554493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 48152019 - 48152088
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| | |||||||| ||||||    
T  48152019 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagttatttat 48152088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 48214101 - 48214170
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| | |||||||| ||||||    
T  48214101 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagttatttat 48214170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 36234393 - 36234445
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  36234393 gtttctatttaactgtcactttcaaagttcaatgcaacgttaaatgttgtttt 36234445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 41926711 - 41926755
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| || |||||||||||| ||||||||||||||||||||||    
T  41926711 ttaactatcactttcaaagtttcatgtaacattaaatgttgtttt 41926755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 53745493 - 53745449
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  53745493 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 53745449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 54106297 - 54106341
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  54106297 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 54106341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 54334403 - 54334351
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  54334403 gtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 54334351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 54911513 - 54911469
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||    
T  54911513 ttaactgtcactttcaaagttcaatgtaacattaaatgatgtttt 54911469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 2154251 - 2154210
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgt 198  Q
    ||||||||| ||||||||||| |||| |||||||||||||||    
T  2154251 ttaactgtcactttcaaagttcaatgcaacattaaatgttgt 2154210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 6902304 - 6902381
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| |||| |||||| ||| ||||||||||| ||||||| || ||| ||  |||||| ||||||    
T  6902304 gtttctatttaactgtcccttttaaagttcaatttaacattaaattttgttttatcaatattgttcttagttatttat 6902381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 13158660 - 13158607
Alignment:
Q  149 gtttctaattaactgtc-tctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| | |||||||||| |||| ||||||||||||||||||    
T  13158660 gtttctatttaactgtcatttttcaaagttcaatgcaacattaaatgttgtttt 13158607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 17102734 - 17102832
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||||||| ||| |||| |||||  | ||       ||| ||| ||||||||| ||||||||||| |||  ||||||||||||||||||    
T  17102734 tactccctccgttcttttttaagtgtctcttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 17102832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 19550280 - 19550349
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| || ||||||||||||||| || ||| ||  |||||| ||||||    
T  19550280 ttaactgtcactttcaaagttcaatgcaaaattaaatgttgttttatcaatattgttcttagttatttat 19550349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 27483998 - 27483929
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| |||| |||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  27483998 ttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 27483929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 45513827 - 45513758
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| |||| |||||| |||  |||||||||||||||||| || ||| || ||||||| ||||||    
T  45513827 ttaactgtcacttttaaagttcaatacaacattaaatgttgttttatcaatattgtccttagttatttat 45513758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 47070069 - 47070000
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  47070069 ttaaccgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 47070000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 24276 - 24232
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  24276 ttaactgtcactttcgaagttcaatgcaacattaaatgttgtttt 24232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 7328489 - 7328533
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||    
T  7328489 ttaactatcactttcaaagttcaatgcaacattaaatgttgtttt 7328533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 27028235 - 27028183
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| |||| ||||| |||||||    
T  27028235 gtttctatttaactgtcactttcaaagttcaatgcaacaataaatattgtttt 27028183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 27039818 - 27039774
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  27039818 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 27039774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 33491351 - 33491307
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||    
T  33491351 ttaactgttactttcaaagttcaatgcaacattaaatgttgtttt 33491307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 43775602 - 43775558
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||| |||||||    
T  43775602 ttaactgtcactttcaaagttcaatgcaacattaaatattgtttt 43775558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 44544389 - 44544337
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| |||||||| || |||| ||||||||||||| ||||    
T  44544389 gtttctatttaactgtcactttcaaaattcaatgcaacattaaatgttatttt 44544337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 45145163 - 45145207
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  45145163 ttaactgtcactttcaaagttcaatgcaatattaaatgttgtttt 45145207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 50091979 - 50092023
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  50091979 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 50092023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 51219296 - 51219252
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||| |||||||    
T  51219296 ttaactgtcactttcaaagttcaatgcaacattaaatattgtttt 51219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 51244658 - 51244702
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  51244658 ttaactgtcactttcaaagttcaatgcaatattaaatgttgtttt 51244702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 52173781 - 52173825
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  52173781 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 52173825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 52175754 - 52175798
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  52175754 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 52175798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 54898298 - 54898254
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||    
T  54898298 ttaactatcactttcaaagttcaatgcaacattaaatgttgtttt 54898254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 34603606 - 34603730
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||| ||||||| |||| |||||||| ||       ||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34603606 ttactccctccgttcctttataactgtcacttttacagaaattttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 34603705  T
Q  202 ttctataatgcccttagtaatttat 226  Q
    ||||||||| |||||||||||||||    
T  34603706 ttctataatacccttagtaatttat 34603730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 14949345 - 14949222
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||| |||| |||| |||||||||||| ||||||| |||       |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  14949345 tacttcctctgttcctttataattgtcacttttacgtaatttttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgttgttttt 14949246  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||||||||||||||||||    
T  14949245 cctataatgcccttagtaatttat 14949222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 38010027 - 38009904
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| |||||||||||       ||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  38010027 tactccctccgttcctttataactgtcacttttacataatttttttgtttccaattaactgtcactttcaaagttcaatgtaactttaaatgttgttttt 38009928  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||| ||||||||||||||||    
T  38009927 cctataaagcccttagtaatttat 38009904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 48087681 - 48087804
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| ||||||| |||       |||| ||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  48087681 tactccctccgttcctttataactgtcacttttacttaaattttttgtttttaattaactctcactttcaaagttcaatgtaacattaaatgttgttttt 48087780  T
Q  203 tctataatgcccttagtaatttat 226  Q
     ||||||| |||||||||||||||    
T  48087781 cctataatacccttagtaatttat 48087804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 1391433 - 1391309
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||| |||||||  ||| |||||||| ||       |||||||||||| |||| ||||||||||| ||||||||| |||||||||||||    
T  1391433 ttactccctccgttcctttataaccgtcacttttacaaaaaaaaattgtttctaattaagtgtcactttcaaagttcaatgtaacactaaatgttgtttt 1391334  T
Q  202 ttctataatgcccttagtaatttat 226  Q
    | |||||||| ||||||||||||||    
T  1391333 tcctataatgtccttagtaatttat 1391309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 18091225 - 18091348
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||| ||||||||| ||||||| |||| |||||||| ||       |||||||||||| |||| ||||||||||| |||||||||||||||| |||| ||    
T  18091225 tactacctccgttcctttataactgtcacttttacagaaattttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgatgttctt 18091324  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||||||||||||||||||    
T  18091325 cctataatgcccttagtaatttat 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 14090269 - 14090346
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||| |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  14090269 gtttataattaactgttactttcaaagttcaatgtaacattaaatgttgttttttctataatacccttagtaatttat 14090346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 30152090 - 30151967
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||| ||||| ||| ||||||| |||| |||||||||||       |||||||||||| |||| ||||||||||| |||||||||||||||| |||| ||    
T  30152090 tactacctccattcctttataactgtcacttttacataaattttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatggtgttatt 30151991  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||||||||| ||||||||    
T  30151990 cctataatgcccttaataatttat 30151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 6150675 - 6150775
Alignment:
Q  101 tttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttt 200  Q
    |||||||||||| ||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||  |||||||||||||||||    
T  6150675 tttactccctccattcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgttt 6150774  T
Q  201 t 201  Q
    |    
T  6150775 t 6150775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 8457173 - 8457049
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| ||||||||| |||||||  ||| |||||||| ||       |||||| ||||| |||| ||||||||||| |||||||||||||| | |||| |    
T  8457173 ttactacctccgttcctttataaccgtcacttttacagaatttttttgtttcttattaagtgtcactttcaaagttcaatgtaacattaaagggtgttct 8457074  T
Q  202 ttctataatgcccttagtaatttat 226  Q
    |  ||||||||||||||||||||||    
T  8457073 tcttataatgcccttagtaatttat 8457049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 9220303 - 9220204
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||||| ||| |||| |||||| | ||       ||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  9220303 ttactccctccgttcttttttaactgtcacttttagagaaaaaatttgttcctaattaactgtcactttcaaagttcaatgtaacattaaatgatgtttt 9220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 55430565 - 55430466
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||| |||||||||||| ||||| |||||       |||||||||||||||||  |||||||||| | |||| |||||||||| |||||    
T  55430565 ttactccctccgttcctttataattgtcacttttgcataaaaaatttgtttctaattaactgtcgttttcaaagttcattgtatcattaaatgtggtttt 55430466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 3802143 - 3802241
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| ||| ||||||||  |||| |||||       ||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||    
T  3802143 tactccctccgttcctttttaattgtcatttttgcataaattttttgtttctaattaaccgtcactttcaaagttcaatgtaacattaaatattgtttt 3802241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 56499829 - 56499776
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  56499829 gtttctaattaactgtcactttcaaagtttaatacaacattaaatgttgttttt 56499776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 1181116 - 1181064
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||| ||||| |||||||||||||||  ||||||||||||||||||    
T  1181116 gtttctaattacctgtcactttcaaagtttaatacaacattaaatgttgtttt 1181064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 30939184 - 30939236
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  30939184 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 30939236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 51347303 - 51347343
Alignment:
Q  161 ctgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  51347303 ctgtcactttcaaagtttaatgtaacattaaatgttgtttt 51347343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 48510130 - 48510038
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgt 195  Q
    |||||||||||||  |||||||||||| ||||| |||||       |||| ||||||||||||  |||||||||| |||||| ||||||||||    
T  48510130 tactccctccgtttctttataattgtcacttttgcataaagattttgtttttaattaactgtcgttttcaaagttcaatgtatcattaaatgt 48510038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 52677407 - 52677308
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||| ||| ||| |||| |||||| | ||       ||| ||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  52677407 ttactccctccgttcctttttaagtgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 52677308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 3036422 - 3036491
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||| |||| ||||||||||||||||||| |||||||||| ||||  | ||| | |||||||||||||||    
T  3036422 ttaattgtcactttcaaagtttaatgtaatattaaatgttattttaccgatattacccttagtaatttat 3036491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 13629400 - 13629331
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  13629400 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 13629331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 20294267 - 20294365
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||  ||| |||||||| ||||| |||||       |||||||||||||| || ||||||||||| |||  |||||||||| |||||||    
T  20294267 tactccctccgtttctttttaattgtcacttttgcataatttttttgtttctaattaactatcactttcaaagttcaatacaacattaaatcttgtttt 20294365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 41813625 - 41813723
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||||||||| ||| |||||||  ||||| |||||       |||||||||||| |||| ||||||||||| |||| || |||||||||||||||    
T  41813625 tactacctccgttcctttttaattgttacttttgcataaaatttttgtttctaattaagtgtcactttcaaagttcaatgcaatattaaatgttgtttt 41813723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 46871958 - 46872027
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  46871958 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 46872027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 47428566 - 47428635
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  47428566 ttaactgtcgctttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 47428635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 48782237 - 48782306
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  48782237 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 48782306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 3436274 - 3436230
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  3436274 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 3436230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 12252137 - 12252181
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  12252137 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 12252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 16464989 - 16464945
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  16464989 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 16464945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 19093368 - 19093316
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||| ||| ||||||||||| |||| ||||||||||||||||||    
T  19093368 gtttctatttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttt 19093316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 19527415 - 19527371
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  19527415 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 19527371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 21044954 - 21044910
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  21044954 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 21044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 23623702 - 23623658
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  23623702 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 23623658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 26620558 - 26620514
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  26620558 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 26620514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 26915963 - 26916035
Alignment:
Q  154 taattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||||   |||||||||||||||||| |||||||| |||| || |||||||  ||||||||| ||||    
T  26915963 taattaactgttattttcaaagtttaatgtaatattaaatggtgttcttcctataatatccttagtaagttat 26916035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 27492396 - 27492440
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  27492396 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 27492440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 31862193 - 31862149
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  31862193 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 31862149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 33755289 - 33755245
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  33755289 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 33755245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 35381630 - 35381578
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  35381630 gtttctatttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 35381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 37394374 - 37394322
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  37394374 gtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 37394322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 43086439 - 43086487
Alignment:
Q  154 taattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  43086439 taattaactgtgactttcaaagttcaatataacattaaatgttgttttt 43086487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 44014120 - 44014076
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  44014120 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 44014076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 44217735 - 44217787
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  44217735 gtttctatttaactgtcactttcgaagttcaatgcaacattaaatgttgtttt 44217787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 44549680 - 44549724
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||    
T  44549680 ttaactgtcgctttcaaagtttaatgcaacattaaatgctgtttt 44549724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 50623443 - 50623495
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  50623443 gtttctatttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 50623495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 55147268 - 55147224
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  55147268 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 55147224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 55935136 - 55935188
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  55935136 gtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 55935188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 37551926 - 37551830
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtt 199  Q
    |||||||||||||| ||| |||||||| |||||  | ||       |||||||||||| |||| ||||||||||| |||  ||||||||||||||||    
T  37551926 tactccctccgttcctttttaattgtcacttttgtagaaattttttgtttctaattaagtgtcactttcaaagttcaatacaacattaaatgttgtt 37551830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 52258005 - 52257954
Alignment:
Q  150 tttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  52258005 tttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 52257954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 54029132 - 54029179
Alignment:
Q  154 taattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  54029132 taattaactgtcactttcaaagttcaatgcaacattaaatgttatttt 54029179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 42133019 - 42133118
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||| ||| |||| ||| |||||| | ||       ||| ||| ||||||||| ||||||||||| |||| |||||||||||| |||||    
T  42133019 ttactccctccgttcctttttaatcgtcacttttagagaaattttttgttcctatttaactgtcgctttcaaagttcaatgcaacattaaatgtagtttt 42133118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 22678516 - 22678447
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||  | ||| |  ||||||||||||||    
T  22678516 ttaactgtcgctttcaaagttcaatgcaatattaaatgttgttttaccaatattatccttagtaatttat 22678447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 22828616 - 22828539
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||| ||| |||||| || ||| | |||||| | ||||||    
T  22828616 gtttctatttaactgtcactttcaaagttcaatgcaacattacatgatgttttatcaatattacccttaattatttat 22828539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 38617514 - 38617445
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  38617514 ttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 38617445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 42099737 - 42099814
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| |||||| || ||||||||||| |||| ||||||||||| |||||| || ||| | |||||| | ||||||    
T  42099737 gtttctatttaactatcactttcaaagttcaatgcaacattaaatggtgttttatcaatattacccttaattatttat 42099814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 44069068 - 44069137
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||| |||| ||||||||||| |||| |||||||||||||||||| || ||| ||  |||||| ||||||    
T  44069068 ttaagtgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattgttcttagttatttat 44069137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 53125453 - 53125376
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| |||||| || ||||||||||| |||| ||||||||||| |||||| || ||| | |||||| | ||||||    
T  53125453 gtttctatttaactttcactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttaattatttat 53125376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 1146264 - 1146212
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||| || |||||||| || |||| ||||||||||||||||||    
T  1146264 gtttcttattaactatcactttcaaatttcaatgcaacattaaatgttgtttt 1146212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 4201525 - 4201481
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||    
T  4201525 ttaactgtcactttcaaagttcaattcaacattaaatgttgtttt 4201481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 5374557 - 5374513
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||| | |||| ||||||||||||||||||    
T  5374557 ttaactgtcactttcaaagctcaatgcaacattaaatgttgtttt 5374513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 6195061 - 6195105
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||||    
T  6195061 ttaactgtcacattcaaagttcaatgcaacattaaatgttgtttt 6195105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 16664278 - 16664322
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||    
T  16664278 ttaacggtcactttcaaagttcaatgcaacattaaatgttgtttt 16664322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 23719991 - 23719947
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  23719991 ttaactgtcactttcgaagttcaatgcaacattaaatgttgtttt 23719947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 29295391 - 29295435
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||    
T  29295391 ttaactgtgactttcaaagttcaatgcaacattaaatgttgtttt 29295435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 34925557 - 34925505
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||||||| |||| |||||||| || ||| |||||||||||||||||||    
T  34925557 gtttttaattaattgtcactttcaaaattcaatataacattaaatgttgtttt 34925505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 35231727 - 35231771
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||    
T  35231727 ttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttt 35231771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 38617853 - 38617897
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| |||||||||||||||| |||||||||| |||||||    
T  38617853 ttaattgtcactttcaaagtttaatgcaacattaaatattgtttt 38617897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 39671362 - 39671406
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||||    
T  39671362 ttaactgtcactttcaaagttcaatgcaacattaaatgtagtttt 39671406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 40411980 - 40412024
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||  |||||||||| ||||||||||||||| |||||||    
T  40411980 ttaactgtcattttcaaagttcaatgtaacattaaatattgtttt 40412024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 41415036 - 41415088
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||| |||| ||||||||||| |||| |||| |||||||||||||    
T  41415036 gtttctatttaattgtcactttcaaagttcaatgcaacaataaatgttgtttt 41415088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 42513233 - 42513189
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  42513233 ttaagtgtcactttcaaagttcaatgcaacattaaatgttgtttt 42513189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 47251442 - 47251494
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| | ||||||| ||||||||||| |||| || |||||||||||||||    
T  47251442 gtttctattcaactgtcactttcaaagttcaatgcaatattaaatgttgtttt 47251494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 53599993 - 53599949
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||| |||||||    
T  53599993 ttaactgtcactttcaaagttcaatgcaacattaaatattgtttt 53599949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 56576310 - 56576266
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||| |||||||    
T  56576310 ttaactgtcactttcaaagttcaatgcaacattaaatattgtttt 56576266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 226
Target Start/End: Original strand, 42088877 - 42088997
Alignment:
Q  106 tccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttct 205  Q
    ||||||||||||||||||| |||| |||||||||||       |||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||    
T  42088877 tccctccgttcttttataactgtcacttttacataatttctttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgttgtttttcct 42088976  T
Q  206 ataatgcccttagtaatttat 226  Q
    |||||||||||||||||||||    
T  42088977 ataatgcccttagtaatttat 42088997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 838327 - 838210
Alignment:
Q  109 ctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctata 208  Q
    |||||||||||||||| ||||||||||| ||||       |||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||     
T  838327 ctccgttcttttataactgtcgcttttatataatttttttgtttctaattaactgtcattttcaaagttcaatgtaacattaaatgttgtttttcctatt 838228  T
Q  209 atgcccttagtaatttat 226  Q
    ||| ||||||||||||||    
T  838227 atgtccttagtaatttat 838210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 36173053 - 36173171
Alignment:
Q  108 cctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctat 207  Q
    |||| |||||||||||| |||| |||||||||||       |||||||||||| ||||  |||||||||| ||| |||||||||||||||||||||||||    
T  36173053 cctctgttcttttataactgtcacttttacataatttttttgtttctaattaagtgtcattttcaaagttcaatataacattaaatgttgttttttctat 36173152  T
Q  208 aatgcccttagtaatttat 226  Q
    |||| ||||||||||||||    
T  36173153 aatgaccttagtaatttat 36173171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 42263718 - 42263643
Alignment:
Q  151 ttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  42263718 ttctaattaagtgtcactttcaaagtttaatgtaacattaaatgttgtttttcctataatgcctttagtaatttat 42263643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 33947692 - 33947569
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||| ||||||||| ||||||| |||| |||||||| ||       |||||||||||| |||| ||||||||||| |||||||||||||||| |||| ||    
T  33947692 tactacctccgttcctttataactgtcacttttacagaaattttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatggtgttctt 33947593  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||| ||||||||||||||    
T  33947592 cctataatgtccttagtaatttat 33947569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 37353969 - 37354092
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||||||| |||| ||||||| |||| |||||| | ||       |||| |||||||||||| ||||||||||| || || ||||||||||||||||||    
T  37353969 tactccctctgttcctttataactgtcacttttataaaaaaaaattgtttttaattaactgtcactttcaaagttcaacgtgacattaaatgttgttttt 37354068  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||| ||||||||||||||||    
T  37354069 cctataaagcccttagtaatttat 37354092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 928294 - 928196
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| |||||||||||| ||||| |||||       |||||||||||||||||  ||||||||| ||||  | ||||||||||||||||    
T  928294 tactccctccgttcctttataattgtcacttttgcataaaatttttgtttctaattaactgtcgttttcaaagtctaatacatcattaaatgttgtttt 928196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 32855043 - 32854945
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| |||||||||||| |||||| | ||       ||| ||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  32855043 tactccctccgttcatttataattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 32854945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 30544546 - 30544598
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  30544546 gtttctaattaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 30544598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 18904128 - 18904081
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgtt 196  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  18904128 gtttctaattaactgtcactttcaaagttcaatgtaacattaaatgtt 18904081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 45065051 - 45065150
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||||| |||||||| ||||| ||||        |||||||||||| |||  ||||||||||| |||  ||||||||||||||||||    
T  45065051 ttactccctccgttcttttttaattgtcacttttgcatattttttttgtttctaattaagtgttactttcaaagttcaatacaacattaaatgttgtttt 45065150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 11560264 - 11560187
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  11560264 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 11560187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 11222533 - 11222481
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  11222533 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 11222481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 37660170 - 37660222
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  37660170 gtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 37660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 479182 - 479113
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||| || ||| |  ||||||| ||||||    
T  479182 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattatccttagttatttat 479113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 13753989 - 13754058
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||  |||||||||||||||||| || ||| | |||||||| ||||||    
T  13753989 ttaactgtcactttcaaagttcaatacaacattaaatgttgttttatcaatattacccttagttatttat 13754058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 25558400 - 25558324
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| |||||||||||||||||| || ||| |  ||||||| ||||||    
T  25558400 gtttctatttaactgtcactttcaaagtt-aatgcaacattaaatgttgttttatcaatattatccttagttatttat 25558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 26342614 - 26342683
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  26342614 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 26342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 28145781 - 28145712
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  28145781 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 28145712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 37116807 - 37116758
Alignment:
Q  152 tctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  37116807 tctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 37116758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 38148252 - 38148199
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||||||||||||||| ||||||||||| |||  ||||||||||||| |||||    
T  38148252 gtttctaattaactgtcactttcaaagttcaatacaacattaaatgttattttt 38148199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3363618 - 3363662
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  3363618 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 3363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 10812233 - 10812277
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  10812233 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 10812277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 13215427 - 13215471
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||    
T  13215427 ttaactgtcactttcgaagttcaatgtaacattaaatgttgtttt 13215471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 25787324 - 25787409
Alignment:
Q  110 tccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgt 195  Q
    ||||||| |||||||||||| ||||| |||||       |||| ||||||||||||  |||||||||| |||||| ||||||||||    
T  25787324 tccgttcctttataattgtcacttttgcataaatattttgtttttaattaactgtcgttttcaaagttcaatgtatcattaaatgt 25787409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 28967448 - 28967396
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||| |||| ||||||||||| |||  ||||||||||||||||||    
T  28967448 gtttctaattaaatgtcactttcaaagttcaatacaacattaaatgttgtttt 28967396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 44360460 - 44360512
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  44360460 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgtttt 44360512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 14288465 - 14288534
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||  |||||||||| ||| ||||||||||||||||||| || ||| || ||||| | ||||||    
T  14288465 ttaactgtcattttcaaagttcaatataacattaaatgttgttttatcaatattgtccttaattatttat 14288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 14295966 - 14295897
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||  | ||| || ||||||| ||||||    
T  14295966 ttaactgtcactttcaaagttcaatacaacattaaatgttgttttaccaatattgtccttagttatttat 14295897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 15183218 - 15183141
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| |||| |||| ||||| ||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  15183218 gtttctatttaattgtcactttcgaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 15183141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 32543996 - 32543927
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||| |||||||||||||| || ||| | || ||||| ||||||    
T  32543996 ttaactgtcactttcaaagttcaatgcaactttaaatgttgttttatcaatattacctttagttatttat 32543927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 36375608 - 36375649
Alignment:
Q  160 actgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||||||| |||| ||||||||||||||||||    
T  36375608 actgtcactttcaaagttcaatgcaacattaaatgttgtttt 36375649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 37093484 - 37093553
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||  || ||||||||||||||| || ||| || ||||||| ||||||    
T  37093484 ttaactgtcactttcaaagttcaatacaatattaaatgttgttttatcaatattgtccttagttatttat 37093553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 38186261 - 38186192
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  38186261 ttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 38186192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 41885659 - 41885728
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||| ||||  | ||| || ||||||| ||||||    
T  41885659 ttaactgtcactttcaaagttcaatgcaacattaaatgttattttaccaatattgtccttagttatttat 41885728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 2012895 - 2012939
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  2012895 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 2012939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 4883637 - 4883681
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||    
T  4883637 ttaactgtcattttcaaagttcaatgcaacattaaatgttgtttt 4883681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 6013509 - 6013553
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  6013509 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 6013553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 9370000 - 9370052
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| || ||||| |||||||||    
T  9370000 gtttctatttaactgtcactttcaaagttcaatgcaatattaagtgttgtttt 9370052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 9706821 - 9706865
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  9706821 ttaactgtcacttttaaagttcaatgcaacattaaatgttgtttt 9706865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 13849924 - 13849880
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| | ||||||||||||||||    
T  13849924 ttaactgtcactttcaaagttcaatgcatcattaaatgttgtttt 13849880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 14541365 - 14541409
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||| ||||||||    
T  14541365 ttaactgtcactttcaaagttcaatgcaacattaaacgttgtttt 14541409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 15893789 - 15893745
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||    
T  15893789 ttaactgtcattttcaaagttcaatgcaacattaaatgttgtttt 15893745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 31025157 - 31025105
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| |||| ||||| |||||||    
T  31025157 gtttctatttaactgtcactttcaaagttcaatgcaacaataaatcttgtttt 31025105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 34309259 - 34309215
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  34309259 ttaactgtcactttcgaagttcaatgcaacattaaatgttgtttt 34309215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 34357212 - 34357256
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  34357212 ttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 34357256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 36405059 - 36405007
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| || |||||||||| ||||    
T  36405059 gtttctatttaactgtcactttcaaagttcaatgcaatattaaatgttatttt 36405007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 43077326 - 43077370
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||| |||||||    
T  43077326 ttaactgtcactttcaaagttcaatgcaacattaaatattgtttt 43077370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 6660933 - 6661056
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| |||||||||||       |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  6660933 tactccctccgttcctttataactgtcacttttacataatttttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgttgttttt 6661032  T
Q  203 tctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||||||    
T  6661033 tctataatgtccttagtaatttat 6661056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 6741335 - 6741458
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| |||||||||||       |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  6741335 tactccctccgttcctttataactgtcacttttacataatttttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgttgttttt 6741434  T
Q  203 tctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||||||    
T  6741435 tctataatgtccttagtaatttat 6741458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 14258695 - 14258781
Alignment:
Q  18 gagtgttatgtctagctgaaagagctatatttcgacaatatggagagtcaaggttttaattctggttgcaaaaactgttcacattta 104  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  14258695 gagtgttatgtccagctgaaagagctatatttcgacaatatggagagtcggggttttaattctggttgcaaaaaatgttcacattta 14258781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 13132376 - 13132253
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||| |||||||| ||||||| |||| |||||||| ||       ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13132376 tactcgctccgttcctttataactgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgttgttttt 13132277  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||| ||||||||||||||    
T  13132276 cctataatgtccttagtaatttat 13132253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 45317632 - 45317755
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||| |||| |||||||| ||       ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  45317632 tactccctccgttcctttataactgtcacttttacagaatttttttgtttccaattaactgtcactttcaaagttcaatgtaacattaaatgttgttttt 45317731  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||| ||||||| ||||||||    
T  45317732 cctataaagcccttaataatttat 45317755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 30205439 - 30205563
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||| |||||| ||||||| |||| |||||||||||        ||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  30205439 ttactccccccgttcctttataactgtcacttttacataatttttttatttctaattaagtgtcactttcaaagttcaatgtaacattaaatgttgtttt 30205538  T
Q  202 ttctataatgcccttagtaatttat 226  Q
    | |||||||| | ||||||||||||    
T  30205539 tcctataatgtctttagtaatttat 30205563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 40608061 - 40608138
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||| |||| || ||||||||||||| |||||||||    
T  40608061 gtttctaattaagtgtcactttcaaagttcaatgtaacattaaatggtgttcttcctataatgcccttggtaatttat 40608138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 11163246 - 11163344
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  11163246 tactccctctgttcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 11163344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 11993919 - 11993996
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  11993919 gtttctatttaactgtcactttcaaagtttaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 11993996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 41890510 - 41890600
Alignment:
Q  111 ccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  41890510 ccgttcctttttaattgtcacttttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 41890600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 38074302 - 38074354
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  38074302 gtttctaattaactgtcactttcaaagtttaatacaacattaaatgttgtttt 38074354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 3720659 - 3720758
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||| ||| |||||||| |||||  ||||       ||| ||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  3720659 ttactccctccgttcctttttaattgtcacttttgaataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 3720758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 31760241 - 31760164
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||||| |||   ||||||||||||||||||| ||||||| |||| || |||||||| | ||||||||||||    
T  31760241 gtttctaattaagtgttattttcaaagtttaatgtaacgttaaatggtgttcttcctataatgtctttagtaatttat 31760164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 40602971 - 40602894
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||||| |||| ||||||||||| ||| |||||||||||  |||| ||||||||||| | ||||| ||||||    
T  40602971 gtttctaattaagtgtcactttcaaagttcaatataacattaaataatgttctttctataatgtctttagtcatttat 40602894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3513391 - 3513435
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  3513391 ttaactgtcactttcaaagtttaatgcaacattaaatgttgtttt 3513435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 13327805 - 13327857
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  13327805 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 13327857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 40228329 - 40228373
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  40228329 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 40228373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 34046831 - 34046954
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||| ||| |||| |||||| | ||       ||||||| ||||||||| ||||||||||| |||| |||||||||| |||||||     
T  34046831 tactccctccgttcctttttaagtgtcacttttagagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatattgtttta 34046930  T
Q  203 tctataatgcccttagtaatttat 226  Q
     | ||| || ||||||| ||||||    
T  34046931 ccaatattgtccttagttatttat 34046954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 8672331 - 8672380
Alignment:
Q  152 tctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  8672331 tctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 8672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 9954683 - 9954752
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  9954683 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 9954752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 11707699 - 11707622
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||| |||||| || ||| | |||||| | ||||||    
T  11707699 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttaattatttat 11707622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 17718483 - 17718581
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| ||| |||||||| |||||  ||||       ||| ||| ||||||||| ||||||||||| |||| ||||||||| ||||||||    
T  17718483 tactccctccgttcctttttaattgtcacttttggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaacgttgtttt 17718581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 34981863 - 34981932
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  34981863 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 34981932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 35498284 - 35498207
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| |||| ||||||||||| ||||||| |||| ||||| || ||| || ||||||| ||||||    
T  35498284 gtttctatttaactgtcacttttaaagtttaatgcaacattagatgtagttttatcaatattgtccttagttatttat 35498207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 167683 - 167639
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  167683 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 167639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 2456316 - 2456272
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  2456316 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 2456272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 15596370 - 15596422
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| ||||||| |||||||| ||||||    
T  15596370 gtttctatttaactgtcactttcaaagttcaatgtaaaattaaatgatgtttt 15596422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 23429943 - 23429987
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  23429943 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 23429987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 23848762 - 23848718
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||    
T  23848762 ttaactgtcactttcaaaatttaatgcaacattaaatgttgtttt 23848718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 33935266 - 33935222
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||    
T  33935266 ttaactgtcactttcaaagtttaatgcaacattaaatattgtttt 33935222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 35052087 - 35052131
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  35052087 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 35052131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 36058259 - 36058311
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||||| || ||||||||||| |||| ||||||||||||||||||    
T  36058259 gtttctatttaactatcactttcaaagttcaatgcaacattaaatgttgtttt 36058311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 38482998 - 38482954
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  38482998 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 38482954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 45281583 - 45281539
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  45281583 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 45281539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 1202650 - 1202581
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| |||| ||||||||||| |||||||||| ||||||| || ||| || | ||||| ||||||    
T  1202650 ttaactgtcacttttaaagtttaatgcaacattaaatattgttttatcaatattgtctttagttatttat 1202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 12763468 - 12763537
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||| ||| ||||||||||| |||| ||| |||||||||||||| || ||| | |||||||| ||||||    
T  12763468 ttaaccgtcactttcaaagttcaatgcaactttaaatgttgttttatcaatattacccttagttatttat 12763537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 33314581 - 33314622
Alignment:
Q  160 actgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||||||| |||| ||||||||||||||||||    
T  33314581 actgtcactttcaaagttcaatgcaacattaaatgttgtttt 33314622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 37998324 - 37998275
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgt 198  Q
    |||| |||||||||||  ||||||||||| ||||||| ||||||||||||    
T  37998324 gtttttaattaactgttactttcaaagttcaatgtaatattaaatgttgt 37998275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 43553073 - 43553142
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||| ||||| |||||||| || ||| | |||||||| ||||||    
T  43553073 ttaactgtcactttcaaagttcaatgcaactttaaacgttgttttatcaatattacccttagttatttat 43553142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 2335467 - 2335511
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  2335467 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 2335511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 4057322 - 4057366
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  4057322 ttaactgtcactttcaaagttcaatgcaatattaaatgttgtttt 4057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 6750649 - 6750693
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  6750649 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 6750693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 6757440 - 6757484
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  6757440 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 6757484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 8731033 - 8730989
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  8731033 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 8730989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 8954913 - 8954861
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||  ||||||||||| |||  || |||||||||||||||    
T  8954913 gtttctaattaactgttactttcaaagttcaatacaatattaaatgttgtttt 8954861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 9301757 - 9301705
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||| |||| ||| || |||  ||||||||||||||||||    
T  9301757 gtttctaattaactgtcacttttaaatttcaatacaacattaaatgttgtttt 9301705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 12342828 - 12342776
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||||| || ||||||||||| |||| |||||||||| |||||||    
T  12342828 gtttctatttaactatcactttcaaagttcaatgcaacattaaatattgtttt 12342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 14228527 - 14228483
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||    
T  14228527 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 14228483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 14263578 - 14263622
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  14263578 ttaactgtcactttaaaagttcaatgcaacattaaatgttgtttt 14263622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 16656735 - 16656779
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  16656735 ttaactgtcactttcaaagttcaatgcaaaattaaatgttgtttt 16656779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 19972305 - 19972357
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| |||||||| || |||| |||| |||||||||||||    
T  19972305 gtttctatttaactgtcactttcaaaattcaatgcaacaataaatgttgtttt 19972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 21020528 - 21020476
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| |||||||| || |||| |||| |||||||||||||    
T  21020528 gtttctatttaactgtcactttcaaaattcaatgcaacaataaatgttgtttt 21020476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 23793489 - 23793437
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||| ||||  |||||||||| ||||||||||| |||||||||||    
T  23793489 gtttctatttaattgtcattttcaaagttcaatgtaacattgaatgttgtttt 23793437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 31028688 - 31028732
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  31028688 ttaactgtcactttaaaagttcaatgcaacattaaatgttgtttt 31028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 39303722 - 39303678
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  39303722 ttaactgtcactttcgaagttcaatgcaacattaaatgttgtttt 39303678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 40521450 - 40521406
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  40521450 ttaactgtcactttcaaagttcaatgcaatattaaatgttgtttt 40521406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 43642195 - 43642151
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  43642195 ttaactgtcactttcaaagttcaatgcaacattaaatgttatttt 43642151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 52825257 - 52825380
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||| ||||||||||||| ||||| ||||||||||       |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  52825257 tactcccttcgttcttttataactgtcgtttttacataatttttttgtttttaattaactgtcactttcaaagttcaatgtaacattaaatgttgttttt 52825356  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||||||||| ||||||||    
T  52825357 cctataatgcccttaataatttat 52825380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 52759008 - 52759131
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||| ||||||||| ||||||| |||| |||||||| ||       |||||||||||| |||| ||||||||||| |||||||||||||||| |||| ||    
T  52759008 tactacctccgttcctttataactgtcacttttacagaaattttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgatgttctt 52759107  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||||||||||||||||||    
T  52759108 cctataatgcccttagtaatttat 52759131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 6931157 - 6931213
Alignment:
Q  168 tttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaattt 224  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  6931157 tttcaaagtttaatgtaacattaaatgttgttttttctataaagcctttagtaattt 6931213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 36318333 - 36318431
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||||||||| ||| ||| |||| |||||| ||||       ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  36318333 tacttcctccgttcctttttaagtgtcacttttagataaattttttgtttctatttaactgtcgctttcaaagttcaatgcaacattaaatgttgtttt 36318431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 45226780 - 45226711
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||| || ||| || ||||||| ||||||    
T  45226780 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattgtccttagttatttat 45226711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 1039570 - 1039526
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  1039570 ttaactgtcactttcaaagtttaatgcaacattaaatgttgtttt 1039526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 1046476 - 1046432
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  1046476 ttaactgtcactttcaaagtttaatgcaacattaaatgttgtttt 1046432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 10675879 - 10675980
Alignment:
Q  100 atttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtt 199  Q
    ||||||||||||||||||||| ||| |||| |||||  | ||       ||| ||| ||||||||| ||||||||||| |||| ||||||||||||||||    
T  10675879 atttactccctccgttcttttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtt 10675978  T
Q  200 tt 201  Q
    ||    
T  10675979 tt 10675980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 13507804 - 13507848
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  13507804 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 13507848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 13514992 - 13515036
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  13514992 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 13515036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 50152423 - 50152511
Alignment:
Q  113 gttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||| |||||||||||||| |||||       |||||||||||||| |  ||||||||||| |||| ||||||||||||||||||    
T  50152423 gttcctttttaattgtcgcttttgcataaatgttttgtttctaattaacttttactttcaaagttcaatgcaacattaaatgttgtttt 50152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 32168569 - 32168454
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||| |||||||| |||||| | ||       ||||||| |||||||||  |||||||||| |||| | ||||||||||||||||     
T  32168569 tactccctccgttcctttttaattgtcacttttagagaaaatttttgtttctatttaactgtcagtttcaaagttcaatgcatcattaaatgttgtttta 32168470  T
Q  203 tctataatgcccttag 218  Q
    || ||| | |||||||    
T  32168469 tcaatattacccttag 32168454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 1038117 - 1038162
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||    
T  1038117 ttaactgtcactttcaaagtttaatgcaatattaaatgttgttttt 1038162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 1045023 - 1045068
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||    
T  1045023 ttaactgtcactttcaaagtttaatgcaatattaaatgttgttttt 1045068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 30686445 - 30686514
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  30686445 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 30686514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 1024590 - 1024634
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||    
T  1024590 ttaactgttactttcaaagttcaatgtaacattaaatgttgtttt 1024634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 8464652 - 8464608
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  8464652 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 8464608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 11248807 - 11248859
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||| |||| ||||||||||| |||  ||||||||||||||||||    
T  11248807 gtttctaattaagtgtcgctttcaaagttcaatacaacattaaatgttgtttt 11248859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 28679055 - 28679099
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  28679055 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 28679099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 31588950 - 31588898
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  31588950 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttatttt 31588898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 32994672 - 32994628
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  32994672 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 32994628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 35483982 - 35483938
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||    
T  35483982 ttaactgtcactttcaaagttcaatgtaatattaaatgttgtttt 35483938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 35531498 - 35531454
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  35531498 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 35531454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 37437256 - 37437212
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  37437256 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 37437212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 43952822 - 43952866
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  43952822 ttaactgtcactttcaaagttcaatgaaacattaaatgttgtttt 43952866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 44182786 - 44182838
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| || |||||||| |||| ||||||||||||||||||    
T  44182786 gtttctatttaactgtcactctcaaagttcaatgcaacattaaatgttgtttt 44182838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 50825775 - 50825731
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||| || |||||||||||||||    
T  50825775 ttaactgtcactttcaaagtttaatgcaatattaaatgttgtttt 50825731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 13699201 - 13699252
Alignment:
Q  150 tttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||||  ||||||||||| |||| ||||||||||||||||||    
T  13699201 tttctatttaactgttactttcaaagttcaatgcaacattaaatgttgtttt 13699252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 7782985 - 7783054
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||| |||||||||| || ||| ||  |||||| ||||||    
T  7782985 ttaactgtcactttcaaagttcaatgcaacattagatgttgttttatcaatattgttcttagttatttat 7783054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 10506847 - 10506916
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||| ||||||||| |||| || ||| | |||||||| ||||||    
T  10506847 ttaactgtcactttcaaagttcaatgcaactttaaatgttattttatcgatattacccttagttatttat 10506916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 19349582 - 19349513
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  19349582 ttaacagtcactttcaaagttgaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 19349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 32348012 - 32348081
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| | ||||||||||| |||| ||||||||||||||||||  | ||| | |||||||| ||||||    
T  32348012 ttaactgccactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagttatttat 32348081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 35700578 - 35700509
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| |||||||| || |||| ||| |||||||||||||| || ||| | |||||||| ||||||    
T  35700578 ttaactgtcactttcaaaattcaatgcaactttaaatgttgttttatcaatattacccttagttatttat 35700509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 51613391 - 51613489
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||| ||| ||| |||||||| |||||| | ||       ||| ||| ||||||||| ||||||||||| |||| | ||||||||||||||||    
T  51613391 tactccctccattcctttttaattgtcacttttagagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttgtttt 51613489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 4101112 - 4101068
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||| |||||| |||||| ||||||||||||||||    
T  4101112 ttaactgtcacttttaaagttcaatgtagcattaaatgttgtttt 4101068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 9362007 - 9362051
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  9362007 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 9362051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 12124678 - 12124722
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  12124678 ttaagtgtcactttcaaagttcaatgcaacattaaatgttgtttt 12124722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 13566710 - 13566754
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||    
T  13566710 ttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttt 13566754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 15660621 - 15660665
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  15660621 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 15660665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 19455602 - 19455558
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  19455602 ttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 19455558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 21927899 - 21927855
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  21927899 ttaactgtcactttcaaagttcaatgcaacattaaatgttatttt 21927855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 22154773 - 22154741
Alignment:
Q  194 gttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| |||||||||||||||||||||||    
T  22154773 gttgtttttcctataatgcccttagtaatttat 22154741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 35605492 - 35605536
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||| ||||||| || |||||||||||||||    
T  35605492 ttaactgtcactttcaaaatttaatgcaaaattaaatgttgtttt 35605536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 38648491 - 38648535
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||| || |||| ||||||||||||||||||    
T  38648491 ttaactgtcactttcaaacttcaatgcaacattaaatgttgtttt 38648535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 45368114 - 45368166
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||| ||||| ||||||||||| |||| |||||| |||||||||||    
T  45368114 gtttctatttatctgtcactttcaaagttcaatgaaacattgaatgttgtttt 45368166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 9602156 - 9602033
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||   ||| |||||||||||       |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  9602156 tactccctccgttcctttatacccgtcacttttacataatttttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgttgttttt 9602057  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||||||||||||||||||    
T  9602056 cctataatgcccttagtaatttat 9602033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 9829727 - 9829604
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||   ||| |||||||||||       |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  9829727 tactccctccgttcctttatacccgtcacttttacataatttttttgtttctaattaagtgtcactttcaaagttcaatgtaacattaaatgttgttttt 9829628  T
Q  203 tctataatgcccttagtaatttat 226  Q
     |||||||||||||||||||||||    
T  9829627 cctataatgcccttagtaatttat 9829604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 33071886 - 33072009
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||| |||||| ||||||| |||| |||||||| ||       ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33071886 ttactccc-ccgttcctttataactgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagtttaatgtaacattaaatgttgtttt 33071984  T
Q  202 ttctataatgcccttagtaatttat 226  Q
    | |||||| ||||||| ||||||||    
T  33071985 tcctataacgcccttaataatttat 33072009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 35859995 - 35860070
Alignment:
Q  151 ttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  35859995 ttctaattaagtgtcattttcaaagtttaatgtaacattaaatgttgtttttcctataacgcccttagtaatttat 35860070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 3177910 - 3178008
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| ||| |||||||| |||||||| ||       ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  3177910 tactccctccgttcctttttaattgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 3178008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 8966163 - 8966065
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||| |||||||||  |||||||    
T  8966163 tactccctccgttcctttttaattgtcacttttgcataaaaattttgtttctaattaactgtcactttcaaagttcaatgcaacattaaacattgtttt 8966065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 8921026 - 8921099
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagt 176  Q
    |||||||||||||| ||||||| ||||||||||||||||       ||||||||||||||||| ||||||||||    
T  8921026 tactccctccgttcctttataactgtcgcttttacataatttttttgtttctaattaactgtcactttcaaagt 8921099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 41675395 - 41675351
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  41675395 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 41675351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 22382286 - 22382237
Alignment:
Q  152 tctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  22382286 tctaattaactgtcactttcaaagttcaatgcaacattaaatgatgtttt 22382237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 31430593 - 31430662
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  31430593 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 31430662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3837896 - 3837940
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||    
T  3837896 ttaactgtcactttcaaagtttaatgcaacattaaatattgtttt 3837940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 6799157 - 6799201
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  6799157 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 6799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 12838295 - 12838243
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| | || ||||||||||||||||||    
T  12838295 gtttctatttaactgtcactttcaaagttcagtgcaacattaaatgttgtttt 12838243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 17354235 - 17354191
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  17354235 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 17354191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 18470341 - 18470385
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  18470341 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 18470385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 29497743 - 29497699
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  29497743 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 29497699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 33173841 - 33173885
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  33173841 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 33173885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 2408870 - 2408827
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttt 200  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||    
T  2408870 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttt 2408827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 36922266 - 36922317
Alignment:
Q  150 tttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  36922266 tttctatttaactgtcacttttaaagttcaatgcaacattaaatgttgtttt 36922317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 48981643 - 48981519
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtct-ctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| |||||||| ||| |||||||| ||||| || ||       ||||||||||| |||||  ||||||||||| ||| |||||||||||||||||||    
T  48981643 tactctctccgttcctttttaattgtcacttttgcagaatttttttgtttctaattacctgtcaactttcaaagttcaatataacattaaatgttgtttt 48981544  T
Q  202 ttctataatgcccttagtaatttat 226  Q
      || || | |||||||| ||||||    
T  48981543 gcctttattacccttagttatttat 48981519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 27235484 - 27235430
Alignment:
Q  154 taattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctata 208  Q
    |||||||||||| ||||||||||| |||  ||||||| |||||||||| ||||||    
T  27235484 taattaactgtcactttcaaagttcaataaaacattagatgttgttttgtctata 27235430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 33100096 - 33099973
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||||||| ||| |||| |||||  | ||       ||| ||| ||||||||| ||||||||||| |||| |||||||||| |||||||     
T  33100096 tactccctccgttcttttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatcttgtttta 33099997  T
Q  203 tctataatgcccttagtaatttat 226  Q
     | ||| || ||||||| ||||||    
T  33099996 ccaatattgtccttagttatttat 33099973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 46715566 - 46715451
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||| |||||||||||  ||||| ||||        ||||| |||||||||||  |||||||||  |||||| |||||||||| |||||    
T  46715566 ttactccatccgttcctttataattgtgacttttgcatacaaaatttgtttccaattaactgtcgttttcaaagtccaatgtatcattaaatgtggtttt 46715467  T
Q  202 ttctataatgccctta 217  Q
     |||||| | ||||||    
T  46715466 atctatattaccctta 46715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 17896732 - 17896663
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||  | ||| || ||||||| ||||||    
T  17896732 ttaactgtcactttcaaagttcaatgcaatattaaatgttgttttaccaatattgtccttagttatttat 17896663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 7312644 - 7312720
Alignment:
Q  150 tttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||| |||| |||| ||||| ||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  7312644 tttctatttaagtgtcactttcgaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 7312720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 20035082 - 20035126
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| | ||||||||||| |||| ||||||||||||||||||    
T  20035082 ttaactggcactttcaaagttcaatgcaacattaaatgttgtttt 20035126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 20045493 - 20045537
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| | ||||||||||| |||| ||||||||||||||||||    
T  20045493 ttaactggcactttcaaagttcaatgcaacattaaatgttgtttt 20045537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 22951035 - 22950983
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| |||||||| || |||| |||||||||||| |||||    
T  22951035 gtttctatttaactgtcactttcaaaattcaatgcaacattaaatgtagtttt 22950983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 26632389 - 26632345
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  26632389 ttaactgtcactttcaaagttcaatgcaacattaaatgttatttt 26632345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 31399140 - 31399096
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  31399140 ttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 31399096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 32528537 - 32528493
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  32528537 ttaactgtcactttcaaagttcaatgaaatattaaatgttgtttt 32528493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 33257915 - 33257959
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||    
T  33257915 ttaactatcactttcaaagttcaatgcaacattaaatgttgtttt 33257959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 33921983 - 33921939
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||    
T  33921983 ttaactgtcactttcaaagttcaatgcaacattgaatgttgtttt 33921939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 34368868 - 34368824
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  34368868 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 34368824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 36298391 - 36298339
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||| ||| |||| ||||||||||| ||||||    
T  36298391 gtttctatttaactgtcactttcaatgttcaatgcaacattaaatgatgtttt 36298339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 36406785 - 36406829
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||  ||||||||||| ||||||||| |||||||||||||    
T  36406785 ttaactgttactttcaaagttcaatgtaacaataaatgttgtttt 36406829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 41891304 - 41891348
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||    
T  41891304 ttaactgtcactttcaaagttcaatgcaacattgaatgttgtttt 41891348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 13957419 - 13957294
Alignment:
Q  101 tttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttt 200  Q
    |||||||||||||||| ||||||| |||| |||||||| ||       ||||| ||||||||||| || |||||||| ||||||||||||||||||||||    
T  13957419 tttactccctccgttcctttataactgtcacttttacagaatttttttgtttccaattaactgtcactctcaaagttcaatgtaacattaaatgttgttt 13957320  T
Q  201 tttctataatgcccttagtaatttat 226  Q
    ||||||||| || |||||||||||||    
T  13957319 tttctataaagctcttagtaatttat 13957294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 4440097 - 4440174
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  4440097 gtttctaattaactgtcactttcaaagttcaatgtaacattaaatgttatttttcctataatgcccttagtaatttat 4440174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 36481083 - 36481160
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||||| ||||  |||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  36481083 gtttctaattaagtgtcattttcaaagttcaatgtaacattaaatgttgtttttcttataatgcccttagtaatttat 36481160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 21150459 - 21150552
Alignment:
Q  108 cctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  21150459 cctccgttcctttttaattgtcacttttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 21150552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 21157600 - 21157693
Alignment:
Q  108 cctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  21157600 cctccgttcctttttaattgtcacttttgcataaaatttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 21157693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 18393229 - 18393130
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||  ||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  18393229 ttactccctctattcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 18393130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 4175683 - 4175614
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||| || ||| || ||||||| ||||||    
T  4175683 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattgtccttagttatttat 4175614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 9076087 - 9076156
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||| || ||| || ||||||| ||||||    
T  9076087 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattgtccttagttatttat 9076156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 18794791 - 18794868
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  18794791 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 18794868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 25785915 - 25785967
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  25785915 gtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 25785967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 28024462 - 28024418
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  28024462 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 28024418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 1088136 - 1088067
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  1088136 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 1088067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 4608986 - 4609084
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||| ||| ||| |||||||| ||||| |||||       |||| ||||||| |||| ||||||||||| |||  ||||||||||||||||||    
T  4608986 tactccctccattcctttttaattgtcacttttgcataatttttttgtttttaattaagtgtcactttcaaagttcaatacaacattaaatgttgtttt 4609084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 7579879 - 7579802
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||| ||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  7579879 gtttctatttaactgtcactttcgaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 7579802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 10359446 - 10359369
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| |||||||||  |||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  10359446 gtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 10359369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 26906499 - 26906552
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||||| ||||||||| ||||||||||| |||| | |||||||||||||||||    
T  26906499 gtttctatttaactgtcactttcaaagttcaatgcagcattaaatgttgttttt 26906552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 36239466 - 36239543
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||| |||||| || ||| | |||||| | ||||||    
T  36239466 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttaattatttat 36239543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 40927115 - 40927213
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||| |||||||||||| ||||| |||||       |||||||||||| ||||  ||||||| || |||||| |||||||||| |||||    
T  40927115 tactccatccgttcctttataattgtcacttttgcataaaaattttgtttctaattaattgtcgttttcaaaattcaatgtatcattaaatgtggtttt 40927213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 4962389 - 4962345
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  4962389 ttaactgtcactttcaaagttcaatggaacattaaatgttgtttt 4962345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 6007891 - 6007943
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||||||||||    
T  6007891 gtttctatttaactgtcactttcaaagttcaatgcatcattaaatgttgtttt 6007943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 11413741 - 11413689
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| ||||||||| || ||||||||||| |||| ||||||||||||||||||    
T  11413741 gtttttaattaactatcactttcaaagttcaatgcaacattaaatgttgtttt 11413689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 18020979 - 18020927
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| |||||||| || |||| ||||||||||||||||||    
T  18020979 gtttctatttaactgtcactttcaaaattcaatgcaacattaaatgttgtttt 18020927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 19831751 - 19831699
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||||| || ||||||||||| |||| ||||||||||||||||||    
T  19831751 gtttctatttaactctcactttcaaagttcaatgcaacattaaatgttgtttt 19831699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 32389002 - 32389046
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  32389002 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 32389046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 34261320 - 34261372
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  34261320 gtttctatttaactgtcactttcaaagttcaatgcaacgttaaatgttgtttt 34261372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 37633684 - 37633736
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||| ||||||||||| | || ||||||||||| ||||||    
T  37633684 gtttctaattaactgtcactttcaaagttcattgcaacattaaatgatgtttt 37633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 38017480 - 38017436
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  38017480 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 38017436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 38363207 - 38363251
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  38363207 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 38363251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 38910282 - 38910334
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  38910282 gtttctatttaactgtcacttttaaagttcaatgcaacattaaatgttgtttt 38910334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 4427607 - 4427565
Alignment:
Q  159 aactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||    
T  4427607 aactgtcactttcaaagttcaatgaaacattaaatgttgtttt 4427565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 6330820 - 6330854
Alignment:
Q  168 tttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    |||||||||||||| ||||||||||||||||||||    
T  6330820 tttcaaagtttaatataacattaaatgttgttttt 6330854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 4985386 - 4985309
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||  |||||| || ||| | |||||| | ||||||    
T  4985386 gtttctatttaactgtcactttcaaagttcaatgcaacattaaataatgttttatcaatattacccttaattatttat 4985309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 6072468 - 6072537
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  6072468 ttaactgttactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 6072537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 12664874 - 12664943
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||||  | ||| || ||||||| ||||||    
T  12664874 ttaactgtcactttcaaagttcaatgcaacattaaatgtagttttaccaatattgtccttagttatttat 12664943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 14794001 - 14793924
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| |||| |||  ||||||||||| |||| |||||||||||||||||| || ||| |  ||||||| ||||||    
T  14794001 gtttctatttaaatgttactttcaaagttcaatgcaacattaaatgttgttttatcaatattatccttagttatttat 14793924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 25027927 - 25027858
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||  |||||||||| |||| ||| |||||||||||||| || ||| | |||||||| ||||||    
T  25027927 ttaactgtcattttcaaagttcaatgcaactttaaatgttgttttatcaatattacccttagttatttat 25027858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 31802804 - 31802873
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||  | ||| | |||||||| ||||||    
T  31802804 ttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagttatttat 31802873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 1795320 - 1795276
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||||||    
T  1795320 ttaactgtcactttcaaagttcaatgttacaataaatgttgtttt 1795276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 4689001 - 4688957
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  4689001 ttaactgtcacttttaaagttcaatgcaacattaaatgttgtttt 4688957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 6689619 - 6689659
Alignment:
Q  161 ctgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| ||||||||||| |||| ||||||||||||||||||    
T  6689619 ctgtcactttcaaagttcaatgcaacattaaatgttgtttt 6689659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 6754382 - 6754338
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||    
T  6754382 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 6754338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 12870102 - 12870058
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||    
T  12870102 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 12870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 16124451 - 16124419
Alignment:
Q  169 ttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| ||||||||||||||||||    
T  16124451 ttcaaagtttaatgcaacattaaatgttgtttt 16124419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 21606461 - 21606417
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  21606461 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 21606417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 26854297 - 26854253
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||| ||||||| |||| ||||||||||||||||||    
T  26854297 ttaactgtcacttccaaagttcaatgcaacattaaatgttgtttt 26854253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 28463588 - 28463544
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  28463588 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 28463544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 32440115 - 32440071
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  32440115 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 32440071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 37306906 - 37306858
Alignment:
Q  153 ctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||| |||| |||||| |||| ||||||||||| ||||||    
T  37306906 ctaattaactgtcacttttaaagttcaatgcaacattaaatgatgtttt 37306858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 37809771 - 37809819
Alignment:
Q  153 ctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||| ||||||||||| | || ||||||||||| ||||||    
T  37809771 ctaattaactgtcactttcaaagttcattgcaacattaaatgatgtttt 37809819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 38160308 - 38160352
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||||    
T  38160308 ttaactgtcgctttcaaagttcaatgcaacattaaatgtagtttt 38160352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 38297819 - 38297775
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  38297819 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 38297775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 39073060 - 39073104
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||    
T  39073060 ttaactgtcattttcaaagttcaatgcaacattaaatgttgtttt 39073104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 40198804 - 40198848
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||    
T  40198804 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 40198848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 42394331 - 42394287
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  42394331 ttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 42394287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 42911566 - 42911610
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| |||||||||| |||||||    
T  42911566 ttaactgtcactttcaaagttcaatgcaacattaaatattgtttt 42911610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 492553 - 492478
Alignment:
Q  151 ttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  492553 ttctaattaagtgtcactttcaaagtttaatgtaacattaaatgttgtttttcctataatgcctttagtaatttat 492478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 148328 - 148381
Alignment:
Q  149 gtttctaattaactgtc-tctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| | |||||||||| |||| ||||||||||||||||||    
T  148328 gtttctatttaactgtcatttttcaaagttcaatgcaacattaaatgttgtttt 148381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 30954 - 30855
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||||||| ||| |||| |||||| | ||       ||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  30954 ttactccctccgttcttttttaactgtcacttttagagaaaaaatttgttcctaattaactgtcactttcaaagttcaatgtaacattaaatgatgtttt 30855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 19811935 - 19812034
Alignment:
Q  102 ttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||||| ||| |||||||| | ||| |||||       ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  19811935 ttactccctccgttcctttttaattgtcacgtttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 19812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 12732210 - 12732254
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  12732210 ttaactgtcactttcaaagtttaatgtaacattaaatgttgtttt 12732254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 218
Target Start/End: Complemental strand, 24356319 - 24356200
Alignment:
Q  99 catttactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgt 198  Q
    |||||||||||||||||| ||| |||||||| |||||| | ||       ||| ||| ||||||||| ||||||||||| |||| | |||||||||||||    
T  24356319 catttactccctccgttcctttttaattgtcacttttagagaaatttattgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttgt 24356220  T
Q  199 tttttctataatgcccttag 218  Q
    ||| || ||| | |||||||    
T  24356219 tttatcaatattacccttag 24356200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 11001070 - 11000972
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||| ||| |||||||||||| ||||| |||||       |||||||||||||||||  |||||||||| |||||| |||||||||| |||||    
T  11001070 tactccatccattcctttataattgtcacttttgcataaagattttgtttctaattaactgtcgttttcaaagttcaatgtatcattaaatgtggtttt 11000972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 7235474 - 7235518
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||    
T  7235474 ttaactgtcactttcaaagtttaatgtaatattaaatgttgtttt 7235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 22784883 - 22784831
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  22784883 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 22784831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 30388751 - 30388799
Alignment:
Q  153 ctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  30388751 ctaattaactgtcactttcaaagttcaatgaaacattaaatgttgtttt 30388799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 30416290 - 30416212
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttatg 227  Q
    ||||||| ||||||||  ||||||||||| |||| ||||||||||| |||||| || ||| | |||||||| |||||||    
T  30416290 gtttctatttaactgttactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttagttatttatg 30416212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 32251211 - 32251096
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttt 202  Q
    ||||||||| ||| ||||||||||||| ||||| |||||       |||||||||||||||||  |||||||||  |||  | ||||||||||||||||     
T  32251211 tactccctctgtttttttataattgtcacttttgcataaaatttttgtttctaattaactgtcgttttcaaagtccaatacatcattaaatgttgtttta 32251112  T
Q  203 tctataatgcccttag 218  Q
     ||||| | |||||||    
T  32251111 cctatattacccttag 32251096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 9838329 - 9838260
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||| |||||||||||||| || ||| | |||||||| ||||||    
T  9838329 ttaactgtcactttcaaagttcaatgcaactttaaatgttgttttatcaatattacccttagttatttat 9838260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3849099 - 3849143
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  3849099 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 3849143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 17124190 - 17124146
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  17124190 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 17124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 22050075 - 22050127
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  22050075 gtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgtttt 22050127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 24663413 - 24663457
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  24663413 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 24663457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 33260734 - 33260778
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  33260734 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 33260778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 34378885 - 34378937
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  34378885 gtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 34378937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 17193192 - 17193261
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  17193192 ttaaatgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 17193261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 7170186 - 7170230
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||||||| || |||| ||||||||||||||||||    
T  7170186 ttaactgtcactttcaaaattcaatgcaacattaaatgttgtttt 7170230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 8992582 - 8992626
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||    
T  8992582 ttaactatcactttcaaagttcaatgcaacattaaatgttgtttt 8992626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 9017029 - 9017073
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||    
T  9017029 ttaactatcactttcaaagttcaatgcaacattaaatgttgtttt 9017073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 11431364 - 11431320
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  11431364 ttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 11431320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 17251463 - 17251419
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||    
T  17251463 ttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttt 17251419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 24635734 - 24635786
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||||||||  |||||||||| ||||||||| | |||||||||||    
T  24635734 gtttctatttaactgtcattttcaaagttcaatgtaacaatgaatgttgtttt 24635786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 26470930 - 26470886
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  26470930 ttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 26470886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 252574 - 252672
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||  |||||||||| |||||||    
T  252574 tactccctccgttcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatattgtttt 252672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 96320 - 96224
Alignment:
Q  105 ctccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||| ||| |||||||| ||||| |||||       ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  96320 ctccctctgttcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 96224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 2834 - 2885
Alignment:
Q  150 tttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||| ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  2834 tttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 2885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 147335 - 147274
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttag 218  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||| || ||| | |||||||    
T  147335 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattacccttag 147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 174 - 130
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  174 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 8180 - 8232
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||| |||||||||  |||||||||| |||| ||||||||||||||||||    
T  8180 gtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgtttt 8232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 23162 - 23214
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||| |||| ||||||||||| |||  ||||||||||||||||||    
T  23162 gtttctaattaagtgtcactttcaaagttcaatacaacattaaatgttgtttt 23214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 49181 - 49225
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  49181 ttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 49225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 295 - 393
Alignment:
Q  103 tactccctccgttcttttataattgtcgcttttacataannnnnnngtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    |||||||||||||  ||| |||||||| |||||| | ||       ||| ||| |||| |||| ||||||||||| |||| ||||||||||||||||||    
T  295 tactccctccgtttctttttaattgtcacttttagagaaaaaatttgttactatttaattgtcactttcaaagttcaatgcaacattaaatgttgtttt 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 14928 - 14859
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||||| ||||||||||| |||| ||| |||||||||||||| || ||| | ||| |||| ||||||    
T  14928 ttaactgtcactttcaaagttcaatgcaactttaaatgttgttttatcaatattacccctagttatttat 14859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 26342 - 26265
Alignment:
Q  149 gtttctaattaactgtctctttcaaagtttaatgtaacattaaatgttgttttttctataatgcccttagtaatttat 226  Q
    ||||||| |||| |||| |||| |||||| |||| ||||||||||||||||||  | ||| || ||||||| ||||||    
T  26342 gtttctatttaattgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 26265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 4550 - 4594
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  4550 ttaactgtcactttcaaagttcaatgcaacattaaatgatgtttt 4594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 195945 - 195901
Alignment:
Q  157 ttaactgtctctttcaaagtttaatgtaacattaaatgttgtttt 201  Q
    ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  195945 ttaactgtcacttttaaagttcaatgcaacattaaatgttgtttt 195901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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