View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17166_low_109 (Length: 239)

Name: NF17166_low_109
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17166_low_109
NF17166_low_109
[»] chr2 (14 HSPs)
chr2 (11-239)||(43138106-43138334)
chr2 (21-208)||(24941461-24941648)
chr2 (14-138)||(23005602-23005725)
chr2 (21-138)||(23792126-23792242)
chr2 (13-83)||(19672754-19672824)
chr2 (16-93)||(22458689-22458765)
chr2 (21-98)||(25109759-25109836)
chr2 (21-83)||(26393308-26393370)
chr2 (21-123)||(27845503-27845605)
chr2 (14-127)||(23208160-23208272)
chr2 (21-81)||(22172983-22173043)
chr2 (21-83)||(18546147-18546209)
chr2 (21-53)||(7187440-7187472)
chr2 (21-53)||(31346135-31346167)
[»] chr7 (23 HSPs)
chr7 (11-208)||(10062877-10063074)
chr7 (21-208)||(48274362-48274549)
chr7 (21-168)||(3387367-3387514)
chr7 (11-127)||(16496235-16496351)
chr7 (21-138)||(9176839-9176956)
chr7 (16-138)||(16324802-16324922)
chr7 (16-93)||(15117364-15117440)
chr7 (16-83)||(15113848-15113914)
chr7 (29-98)||(1867245-1867314)
chr7 (21-98)||(14037088-14037165)
chr7 (21-98)||(14347118-14347195)
chr7 (21-98)||(11768094-11768171)
chr7 (21-138)||(14045621-14045737)
chr7 (21-138)||(14355651-14355767)
chr7 (13-52)||(47832692-47832731)
chr7 (21-59)||(17180533-17180571)
chr7 (21-83)||(37793396-37793458)
chr7 (16-81)||(42462859-42462924)
chr7 (13-53)||(1856397-1856437)
chr7 (13-53)||(13917569-13917609)
chr7 (21-81)||(16997080-16997140)
chr7 (21-81)||(17052766-17052826)
chr7 (21-81)||(18455594-18455654)
[»] chr8 (24 HSPs)
chr8 (21-208)||(26222335-26222522)
chr8 (21-208)||(26220431-26220618)
chr8 (16-138)||(40492027-40492149)
chr8 (14-138)||(24353896-24354019)
chr8 (12-83)||(13507227-13507298)
chr8 (12-83)||(13596759-13596830)
chr8 (14-92)||(22365531-22365609)
chr8 (14-138)||(17266141-17266264)
chr8 (21-93)||(14102356-14102427)
chr8 (21-138)||(2418007-2418122)
chr8 (21-62)||(39834560-39834601)
chr8 (21-101)||(22984530-22984610)
chr8 (24-83)||(17085077-17085136)
chr8 (24-83)||(17085311-17085370)
chr8 (11-98)||(22966824-22966912)
chr8 (21-81)||(22996699-22996759)
chr8 (21-122)||(19936244-19936344)
chr8 (11-52)||(5609837-5609878)
chr8 (21-92)||(7464908-7464980)
chr8 (130-162)||(17438788-17438820)
chr8 (130-162)||(19154136-19154168)
chr8 (21-81)||(20501234-20501294)
chr8 (21-81)||(20532540-20532600)
chr8 (130-162)||(24353861-24353893)
[»] chr6 (13 HSPs)
chr6 (21-208)||(16447758-16447945)
chr6 (21-208)||(21119810-21119997)
chr6 (21-208)||(19102466-19102653)
chr6 (21-168)||(3851000-3851147)
chr6 (21-127)||(19024237-19024343)
chr6 (14-81)||(18454115-18454182)
chr6 (21-83)||(22792434-22792496)
chr6 (11-53)||(23531890-23531932)
chr6 (21-54)||(19669335-19669368)
chr6 (21-81)||(14978547-14978607)
chr6 (130-162)||(23077519-23077551)
chr6 (21-81)||(25618904-25618964)
chr6 (130-162)||(35011965-35011997)
[»] chr5 (11 HSPs)
chr5 (21-208)||(18318188-18318375)
chr5 (21-201)||(20765234-20765413)
chr5 (13-127)||(36315386-36315500)
chr5 (21-138)||(22177351-22177467)
chr5 (9-138)||(27988097-27988225)
chr5 (21-83)||(26739801-26739863)
chr5 (22-83)||(26731989-26732050)
chr5 (117-162)||(5888489-5888534)
chr5 (21-79)||(21327427-21327485)
chr5 (21-101)||(20572728-20572808)
chr5 (21-81)||(40723464-40723524)
[»] chr4 (12 HSPs)
chr4 (21-208)||(14281129-14281316)
chr4 (21-201)||(54797890-54798070)
chr4 (14-138)||(53081300-53081423)
chr4 (21-127)||(26790198-26790303)
chr4 (16-81)||(26049619-26049684)
chr4 (21-83)||(14852028-14852090)
chr4 (12-53)||(51463025-51463066)
chr4 (21-53)||(12611925-12611957)
chr4 (130-162)||(15867994-15868026)
chr4 (21-53)||(23802410-23802442)
chr4 (21-81)||(32306156-32306216)
chr4 (130-162)||(32852214-32852246)
[»] scaffold0022 (2 HSPs)
scaffold0022 (21-201)||(117316-117496)
scaffold0022 (14-138)||(128095-128219)
[»] chr3 (24 HSPs)
chr3 (21-208)||(21619261-21619448)
chr3 (21-208)||(36167410-36167597)
chr3 (21-208)||(10551183-10551370)
chr3 (14-162)||(43927913-43928061)
chr3 (18-127)||(28195472-28195581)
chr3 (12-92)||(23275541-23275621)
chr3 (11-98)||(17738151-17738238)
chr3 (21-127)||(10557669-10557775)
chr3 (21-138)||(45219416-45219531)
chr3 (11-83)||(19039486-19039558)
chr3 (21-83)||(21838359-21838421)
chr3 (14-98)||(605519-605603)
chr3 (13-81)||(44495524-44495592)
chr3 (14-135)||(22109478-22109598)
chr3 (21-83)||(15207821-15207883)
chr3 (11-53)||(22146762-22146804)
chr3 (14-83)||(37250314-37250384)
chr3 (11-52)||(22792179-22792220)
chr3 (11-71)||(24339934-24339995)
chr3 (16-81)||(32402181-32402246)
chr3 (21-81)||(9578533-9578593)
chr3 (21-81)||(11202209-11202269)
chr3 (130-162)||(14501962-14501994)
chr3 (21-53)||(50243827-50243859)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-96)||(72551-72626)
[»] scaffold0123 (1 HSPs)
scaffold0123 (14-134)||(25934-26053)
[»] chr1 (22 HSPs)
chr1 (11-127)||(14294722-14294838)
chr1 (11-127)||(51131398-51131514)
chr1 (21-127)||(21342933-21343039)
chr1 (21-127)||(21347798-21347904)
chr1 (21-138)||(50687442-50687558)
chr1 (14-138)||(50613236-50613360)
chr1 (14-138)||(50621064-50621188)
chr1 (13-98)||(27652388-27652473)
chr1 (21-138)||(43629301-43629416)
chr1 (21-137)||(16093025-16093141)
chr1 (21-138)||(16381965-16382083)
chr1 (21-82)||(21683883-21683944)
chr1 (21-81)||(52940031-52940091)
chr1 (14-81)||(21042502-21042569)
chr1 (11-44)||(22921063-22921096)
chr1 (14-138)||(41049169-41049293)
chr1 (21-81)||(13880542-13880602)
chr1 (21-53)||(20453640-20453672)
chr1 (21-81)||(20959017-20959077)
chr1 (130-162)||(27652515-27652547)
chr1 (21-81)||(48521399-48521459)
chr1 (130-162)||(50687407-50687439)
[»] scaffold1419 (1 HSPs)
scaffold1419 (21-138)||(887-1004)
[»] scaffold1403 (1 HSPs)
scaffold1403 (14-138)||(1371-1494)
[»] scaffold0601 (1 HSPs)
scaffold0601 (21-133)||(7512-7623)
[»] scaffold0184 (1 HSPs)
scaffold0184 (11-127)||(241-357)
[»] scaffold0420 (1 HSPs)
scaffold0420 (21-138)||(5464-5581)
[»] scaffold0090 (1 HSPs)
scaffold0090 (21-98)||(2902-2979)
[»] scaffold0138 (2 HSPs)
scaffold0138 (21-98)||(17369-17446)
scaffold0138 (11-44)||(13806-13839)
[»] scaffold0076 (1 HSPs)
scaffold0076 (9-138)||(22491-22619)
[»] scaffold0139 (1 HSPs)
scaffold0139 (14-138)||(39168-39292)
[»] scaffold0114 (1 HSPs)
scaffold0114 (12-83)||(46237-46308)
[»] scaffold0106 (1 HSPs)
scaffold0106 (19-127)||(18855-18963)
[»] scaffold0914 (1 HSPs)
scaffold0914 (21-83)||(2630-2692)
[»] scaffold0014 (3 HSPs)
scaffold0014 (13-78)||(79301-79367)
scaffold0014 (70-154)||(78906-78989)
scaffold0014 (21-83)||(203544-203607)
[»] scaffold0001 (2 HSPs)
scaffold0001 (12-138)||(84451-84575)
scaffold0001 (21-81)||(447401-447461)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-93)||(86435-86511)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-127)||(333178-333285)
[»] scaffold0072 (2 HSPs)
scaffold0072 (16-82)||(62330-62395)
scaffold0072 (21-54)||(58748-58781)
[»] scaffold0169 (1 HSPs)
scaffold0169 (21-83)||(28700-28762)
[»] scaffold0347 (1 HSPs)
scaffold0347 (21-98)||(9772-9849)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-98)||(37287-37364)
[»] scaffold1835 (1 HSPs)
scaffold1835 (21-81)||(195-255)
[»] scaffold1439 (1 HSPs)
scaffold1439 (13-53)||(1090-1130)
[»] scaffold0320 (1 HSPs)
scaffold0320 (12-92)||(12838-12918)
[»] scaffold0145 (1 HSPs)
scaffold0145 (21-81)||(10725-10785)
[»] scaffold0007 (1 HSPs)
scaffold0007 (11-79)||(163551-163619)
[»] scaffold0005 (1 HSPs)
scaffold0005 (21-93)||(268545-268617)
[»] scaffold0108 (1 HSPs)
scaffold0108 (14-81)||(4018-4085)
[»] scaffold0750 (1 HSPs)
scaffold0750 (21-83)||(4523-4585)
[»] scaffold0130 (1 HSPs)
scaffold0130 (13-98)||(901-987)
[»] scaffold0046 (2 HSPs)
scaffold0046 (21-83)||(16089-16151)
scaffold0046 (21-83)||(25276-25338)
[»] scaffold0333 (2 HSPs)
scaffold0333 (11-44)||(7505-7538)
scaffold0333 (11-44)||(14885-14918)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-122)||(220338-220437)
[»] scaffold0357 (1 HSPs)
scaffold0357 (130-162)||(4761-4793)
[»] scaffold0293 (1 HSPs)
scaffold0293 (21-53)||(19304-19336)
[»] scaffold0261 (1 HSPs)
scaffold0261 (130-162)||(17592-17624)
[»] scaffold0256 (1 HSPs)
scaffold0256 (164-208)||(1971-2015)
[»] scaffold0180 (1 HSPs)
scaffold0180 (130-162)||(33793-33825)
[»] scaffold0098 (1 HSPs)
scaffold0098 (130-162)||(29524-29556)
[»] scaffold0051 (1 HSPs)
scaffold0051 (21-53)||(32158-32190)
[»] scaffold0010 (1 HSPs)
scaffold0010 (21-81)||(7197-7257)


Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 43138334 - 43138106
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgat 110  Q
    ||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43138334 ttattctaaggtaagggtgagactaacattcaatcttattaggtctgtaattctgatgattaaatttaacaagggtgggattagttttgaaggatttgat 43138235  T
Q  111 aattagggttaaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttgat 210  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43138234 aattagggttaaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatcagatgaattaaagtaataggtggtgttcatgttgat 43138135  T
Q  211 ggaataatatggtactgtatttactccaa 239  Q
    |||||||||||||||||||||||||||||    
T  43138134 ggaataatatggtactgtatttactccaa 43138106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 24941648 - 24941461
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  24941648 gtaagggtgagacaaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaatttgggtt 24941549  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  24941548 aaagtgaggaattgatgaaaaattcgtagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 24941461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 23005725 - 23005602
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||| ||| || |||||||||||  || |||||| |||    
T  23005725 ttctaaggtaagggtgagactagcattcaattctattaagtctgtaattttgatgattaaatttaagaagtgtaggattagttttagagaatttgagaat 23005626  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    || |||||||| ||  |||||||||    
T  23005625 ta-ggttaaagggagaaattgatga 23005602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 23792242 - 23792126
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||  ||||| ||| | || | |||  ||||||||||    
T  23792242 gtaagggtgagcctagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtatgattaatttag-agaagttggaaattagggtt 23792144  T
Q  121 aaagtgaagaattgatga 138  Q
    |||||||  |||||||||    
T  23792143 aaagtgagaaattgatga 23792126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 19672824 - 19672754
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||| ||||||||||||||| ||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  19672824 attctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaag 19672754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 22458689 - 22458765
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatta 93  Q
    |||| ||||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||    
T  22458689 ctaaggtaagggtgagactagcattcaattttattaagtctgtaattctgatgatt-aatttaacaagtgtgggatta 22458765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 25109836 - 25109759
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || | |||||||||    
T  25109836 gtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtagaattagtttt 25109759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 26393370 - 26393308
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||||||||||||||||||  | |||||| ||||||| ||||||||||||||||||||    
T  26393370 gtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaag 26393308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 27845605 - 27845503
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag-ggtgggattagttttgaaggatttgataattagggt 119  Q
    |||||||||||||||||||||||| || |||||| | ||||| ||||||||| ||||||||||  || |||||||||||  || ||| || |||||||||    
T  27845605 gtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagtttttgagaattgga-aattagggt 27845507  T
Q  120 taaa 123  Q
    ||||    
T  27845506 taaa 27845503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 23208272 - 23208160
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||| ||||||||  |||| ||| ||||||| ||||| ||  || ||||||| || |||||| ||| | || | |||| |||    
T  23208272 ttctaaggtaagggtgagactagcattcaattctattcagtctgtaattttgatggttgtatctaacaagtgtaggattaatttag-agaagttgaaaat 23208174  T
Q  114 tagggttaaagtga 127  Q
    ||||||||||||||    
T  23208173 tagggttaaagtga 23208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 22172983 - 22173043
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||||||||||||||||||||| |||||  | | |||||||| |||| ||||||||    
T  22172983 gtaagggtgagactaacattcaatcttcttaagcctatgattatgataattagatttaaca 22173043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 18546147 - 18546209
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||||||||||| |||||| || |||||| | ||||| ||||||||| ||||| ||||    
T  18546147 gtaagggtgagactaacgttcaattttcttaagtctataattctgatgattagatttagcaag 18546209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 7187472 - 7187440
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  7187472 gtaagggtgagactaacattcaatcttcttaag 7187440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 31346167 - 31346135
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  31346167 gtaagggtgagactaacattcaatcttcttaag 31346135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 10062877 - 10063074
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgat 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||     
T  10062877 ttattctaaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgag 10062976  T
Q  111 aattagggttaaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  10062977 aattagggttaaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatttgatgaattaaagtaataggtggtgttcatgttg 10063074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 48274549 - 48274362
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  48274549 gtaagggtgagactaacattcaatcttatcaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 48274450  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  48274449 aaagtgaggaattgatgaaaaattattagattgatgtagaaagagtagataatctgatgaattaaagtaataagtggtgttcatgttg 48274362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 3387514 - 3387367
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  3387514 gtaagggtgagactaacattcaatcttattaagtccgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 3387415  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtag 168  Q
    | ||||| |||||||||||||||||||||||||| || ||||||||||    
T  3387414 agagtgaggaattgatgaaaaattgttagattgatgttgaaagagtag 3387367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 16496351 - 16496235
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgat 110  Q
    |||||||||  |||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || ||||||     
T  16496351 ttattctaagataagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgag 16496252  T
Q  111 aattagggttaaagtga 127  Q
    |||||||||||| ||||    
T  16496251 aattagggttaaggtga 16496235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 9176839 - 9176956
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||| |||||||| ||||||||| ||||||| |||| ||||||||||||||| || |||||||||||  || ||||||  |||||||||    
T  9176839 gtaagggtgagactagcattcaattttattaagtctgtaattctgataattaaatttaacaagtgtaggattagttttagagaatttgaggattagggtt 9176938  T
Q  121 aa-agtgaagaattgatga 138  Q
    || |||| |||||||||||    
T  9176939 aagagtg-agaattgatga 9176956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 16324922 - 16324802
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataatta 115  Q
    |||| ||||||||||||||| |||||||||||||||||| |||| || |||||||| ||||||||||| || |||||| ||| ||    || || |||||    
T  16324922 ctaaggtaagggtgagactagcattcaatcttattaagtctgtacttctgatgatt-aatttaacaagtgtaggattaatttagagaagttggagaatta 16324824  T
Q  116 gggttaaagtgaagaattgatga 138  Q
     ||||||||||| ||||||||||    
T  16324823 -ggttaaagtgaggaattgatga 16324802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 15117440 - 15117364
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatta 93  Q
    |||| ||||||||||||||| |||||||||||||||||| |||| || |||||||| ||||||||||| || ||||||    
T  15117440 ctaaggtaagggtgagactagcattcaatcttattaagtctgtacttctgatgatt-aatttaacaagtgtaggatta 15117364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 15113914 - 15113848
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||| ||||||||||||||| |||||||||||||||||| |||| || |||||||| |||||||||||    
T  15113914 ctaaggtaagggtgagactagcattcaatcttattaagtctgtacttctgatgatt-aatttaacaag 15113848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 1867245 - 1867314
Alignment:
Q  29 gagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    |||||||||||||||||||||||||| ||||||| ||||  ||  |||||||||| || |||||||||||    
T  1867245 gagactaacattcaatcttattaagtctgtaattctgatagttgtatttaacaagtgtaggattagtttt 1867314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 14037165 - 14037088
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||||||||| ||||||||  |||||||| ||||||| ||||| ||  |||||||||| || |||||||||||    
T  14037165 gtaagggtgagactagcattcaattctattaagtctgtaattctgatggttgtatttaacaagtgtaggattagtttt 14037088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 14347195 - 14347118
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||||||||| ||||||||  |||||||| ||||||| ||||| ||  |||||||||| || |||||||||||    
T  14347195 gtaagggtgagactagcattcaattctattaagtctgtaattctgatggttgtatttaacaagtgtaggattagtttt 14347118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 11768094 - 11768171
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||| ||||||||||||||||| |||||  | ||||| ||||||||| |||||||| | || || ||||||||    
T  11768094 gtaagggtgggactaacattcaatcttcttaagcctataattctgatgattagatttaacatgtgtaggtttagtttt 11768171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 14045737 - 14045621
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||| |||||||||| ||||||||  |||||||| ||||||| ||||| ||  | |||||||| || |||||||||||  |  ||| || ||||| ||||    
T  14045737 gtaaaggtgagactagcattcaattctattaagtctgtaattctgatggttgtacttaacaagtgtaggattagttttagaaaattggagaatta-ggtt 14045639  T
Q  121 aaagtgaagaattgatga 138  Q
    ||||||| ||||||||||    
T  14045638 aaagtgaggaattgatga 14045621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 14355767 - 14355651
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||| |||||||||| ||||||||  |||||||| ||||||| ||||| ||  | |||||||| || |||||||||||  |  ||| || ||||| ||||    
T  14355767 gtaaaggtgagactagcattcaattctattaagtctgtaattctgatggttgtacttaacaagtgtaggattagttttagaaaattggagaatta-ggtt 14355669  T
Q  121 aaagtgaagaattgatga 138  Q
    ||||||| ||||||||||    
T  14355668 aaagtgaggaattgatga 14355651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 47832731 - 47832692
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaa 52  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  47832731 attctaaggtaagggtgagactaacattcaattttattaa 47832692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 17180533 - 17180571
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgta 59  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  17180533 gtaagggtgagactagcattcaatcttattaagtctgta 17180571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 37793396 - 37793458
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||| ||||||||||||||||| |||||    ||||| ||||||||| ||||||||||    
T  37793396 gtaagggtgggactaacattcaatcttcttaagccgttaattctgatgattagatttaacaag 37793458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 42462924 - 42462859
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    |||| ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  42462924 ctaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaaca 42462859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 1856397 - 1856437
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||| ||||||||| ||||||||||||||||| |||||    
T  1856397 attctaaggtaagggtgggactaacattcaatcttcttaag 1856437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 13917569 - 13917609
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||| ||||||||| ||||||||||||||||| |||||    
T  13917569 attctaaggtaagggtgggactaacattcaatcttcttaag 13917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 16997140 - 16997080
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  16997140 gtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaaca 16997080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 17052766 - 17052826
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||    ||||| ||||||||| ||||||||    
T  17052766 gtaagggtgggactaacattcaatcttcttaagccgataattttgatgattagatttaaca 17052826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 18455594 - 18455654
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| ||||| || | ||| |||| |||| ||||||||    
T  18455594 gtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaaca 18455654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 26222335 - 26222522
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  26222335 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 26222434  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  26222435 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 26222522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 26220618 - 26220431
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  26220618 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 26220519  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  26220518 aaagtgagaaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 26220431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 40492027 - 40492149
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataatta 115  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| || |||||| ||||  || |||||| |||||    
T  40492027 ctaaggtaagggtgagactagcattcaatcttattaagtctgtaattttgatgattaaatttaacaagtgtaggattaattttagagaatttgagaatta 40492126  T
Q  116 gggttaa-agtgaagaattgatga 138  Q
    ||||||| |||| |||||||||||    
T  40492127 gggttaagagtg-agaattgatga 40492149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 24354019 - 24353896
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||  | ||||||||  || |||||| |||    
T  24354019 ttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtatggttagttttagagaatttgagaat 24353920  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    || |||||| ||||  |||||||||    
T  24353919 ta-ggttaaggtgagaaattgatga 24353896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 13507227 - 13507298
Alignment:
Q  12 tattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13507227 tattctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaag 13507298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 13596759 - 13596830
Alignment:
Q  12 tattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13596759 tattctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaag 13596830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 22365609 - 22365531
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatt 92  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| || |||||    
T  22365609 ttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 22365531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 17266141 - 17266264
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| |||||||||||||||||||||||||||||||| | ||||||| ||||| ||  |||||||||| || ||||| |||||  || | |||  |||    
T  17266141 ttctaaggtaagggtgagactaacattcaatcttattaaatctgtaattctgatggttgtatttaacaagtgtaggatt-gttttagagaagttggaaat 17266239  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    ||||||||||||||  |||||||||    
T  17266240 tagggttaaagtgagaaattgatga 17266264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 14102356 - 14102427
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatta 93  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||| || ||||||    
T  14102356 gtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-aatttaacaagtgtaggatta 14102427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 2418007 - 2418122
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||| |||||||| || ||| | |||||||| ||||||||| |||||| ||| || ||||||| |||| || |||||| ||||||||||    
T  2418007 gtaagggtgagactagcattcaattttcttatg-atgtaattctgatgattagatttaaaaagtgtaggattag-tttggagaatttgagaattagggtt 2418104  T
Q  121 aa-agtgaagaattgatga 138  Q
    || |||| |||||||||||    
T  2418105 aagagtg-agaattgatga 2418122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 39834601 - 39834560
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaatt 62  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  39834601 gtaagggtgagactaacattcaatcttattaagtctgtaatt 39834560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 22984610 - 22984530
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaa 101  Q
    ||||||||||||||||||||||||||| |||||  | | ||| ||||||||| |||||||| | || || |||||||||||    
T  22984610 gtaagggtgagactaacattcaatcttcttaagcctttgattctgatgattagatttaacatgtgtaggtttagttttgaa 22984530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 17085077 - 17085136
Alignment:
Q  24 agggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||| ||||||||||||||||| |||||  | ||||||||||||||| ||||||||||    
T  17085077 agggtgggactaacattcaatcttcttaagcctttaattatgatgattagatttaacaag 17085136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 17085311 - 17085370
Alignment:
Q  24 agggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||| ||||||||||||||||| |||||  | ||||||||||||||| ||||||||||    
T  17085311 agggtgggactaacattcaatcttcttaagcctttaattatgatgattagatttaacaag 17085370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 22966912 - 22966824
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaa-gtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||| ||||||||||||||| ||||||||  ||||||  ||| ||||| ||||||||  |||||||||| || ||||| |||||    
T  22966912 ttattctaaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttaacaagtgtaggattggtttt 22966824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 22996759 - 22996699
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||||||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  22996759 gtaagggtgagactaacattcaatcttcttaagcctatgattttgatgattagatttaaca 22996699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 19936244 - 19936344
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagg-gtgggattagttttgaaggatttgataattagggt 119  Q
    ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||  ||||||| |  || || ||||||||  || |||||| |||||||||    
T  19936244 gtaagggtgagactagcattcaattctattaagtctgtaattctgatgatta--tttaacatgttgtaggtttagtttttgagaatttgagaattagggt 19936341  T
Q  120 taa 122  Q
    |||    
T  19936342 taa 19936344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 5609837 - 5609878
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaa 52  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  5609837 ttattctaaggtaagggtgagactagcattcaattttattaa 5609878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 7464908 - 7464980
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaa-gtatgtaattatgatgattaaatttaacaagggtgggatt 92  Q
    |||||||||||||||||||||||| |||||||  ||| ||||| ||||||||  ||||| |||| || |||||    
T  7464908 gtaagggtgagactaacattcaattttattaacctatataattctgatgattgtatttagcaagtgtaggatt 7464980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 17438788 - 17438820
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  17438788 aattgatgaaaaattgttagattgatgtagaaa 17438820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 19154136 - 19154168
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  19154136 aattgatgaaaaattgttagattgatgtagaaa 19154168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 20501234 - 20501294
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  20501234 gtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaaca 20501294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 20532540 - 20532600
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||||||||||||||||||  |||||||    ||||| ||||||||| ||||||||    
T  20532540 gtaagggtgagactaacattcaattctattaagctgataattctgatgattagatttaaca 20532600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 24353893 - 24353861
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  24353893 aattgatgaaaaattgttagattgatgtagaaa 24353861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 16447758 - 16447945
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16447758 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 16447857  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  16447858 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 16447945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 21119810 - 21119997
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||    
T  21119810 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattaattttggaagatttgagaattagggtt 21119909  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21119910 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 21119997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 19102466 - 19102653
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  19102466 gtaagggtgagactaacattcaatcttattaagtcagtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 19102565  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  19102566 aaagtgaggaattgatgaaaaattgttagatagatgtagaaagagtggataatctgatgaattaaagtaataggtggtgttcatgttg 19102653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 3851000 - 3851147
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  3851000 gtaagggtgagactaacattcaatcttattaagtccgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 3851099  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtag 168  Q
    | ||||| |||||||||||||||||||||||||| || ||||||||||    
T  3851100 agagtgaggaattgatgaaaaattgttagattgatgttgaaagagtag 3851147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 19024343 - 19024237
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||  ||||||||  |||||||| ||||||| |||||||||| ||||||||| || ||||| |||||  || |||||| ||||||||||    
T  19024343 gtaagggtgagacttgcattcaattctattaagtctgtaattctgatgattaagtttaacaagtgtaggattggttttagagaatttgagaattagggtt 19024244  T
Q  121 aaagtga 127  Q
    |||||||    
T  19024243 aaagtga 19024237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 18454182 - 18454115
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    |||||| ||||||||| ||||||||||||||||| ||||| || | ||| |||| |||| ||||||||    
T  18454182 ttctaaggtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaaca 18454115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 22792434 - 22792496
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||||||||||||||||||| || |||||  | || || ||||||||| ||||||||||    
T  22792434 gtaagggtgagactaacattcaattttcttaagcttatatttctgatgattagatttaacaag 22792496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 23531890 - 23531932
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||    
T  23531890 ttattctaaggtaagggtgggactaacattcaatcttcttaag 23531932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 19669368 - 19669335
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagt 54  Q
    ||||||||||||||||||||||||| ||||||||    
T  19669368 gtaagggtgagactaacattcaatcctattaagt 19669335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 14978547 - 14978607
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  ||| ||| |||| |||| ||||||||    
T  14978547 gtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaaca 14978607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 23077551 - 23077519
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  23077551 aattgatgaaaaattgttagattgatgtagaaa 23077519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 25618904 - 25618964
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  ||| ||| |||| |||| ||||||||    
T  25618904 gtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaaca 25618964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 35011997 - 35011965
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  35011997 aattgatgaaaaattgttagattgatgtagaaa 35011965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 18318188 - 18318375
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18318188 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 18318287  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  18318288 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 18318375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 201
Target Start/End: Original strand, 20765234 - 20765413
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  20765234 gtaagggtgagactaaaattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 20765333  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtt 201  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  20765334 aaagtgaggaa-tgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataagtggtgtt 20765413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 36315500 - 36315386
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataa 112  Q
    ||||||| ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || |||||| ||    
T  36315500 attctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgagaa 36315401  T
Q  113 ttagggttaaagtga 127  Q
    |||||||||| ||||    
T  36315400 ttagggttaaggtga 36315386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 22177351 - 22177467
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| || |||||| ||| | || | |||  ||||||| ||    
T  22177351 gtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtaggattaatttag-agaagttggaaattaggttt 22177449  T
Q  121 aaagtgaagaattgatga 138  Q
    |||||||  |||||||||    
T  22177450 aaagtgagaaattgatga 22177467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 27988097 - 27988225
Alignment:
Q  9 gattattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttg 108  Q
    |||| |||||| ||||||||||||||||||||||||  |||||||| ||||||| ||||| |||||||||||||| || |||||| ||| | || | | |    
T  27988097 gatttttctaaggtaagggtgagactaacattcaattctattaagtctgtaattctgatggttaaatttaacaagtgtaggattaatttag-agaagtgg 27988195  T
Q  109 ataattagggttaaagtgaagaattgatga 138  Q
      |||||||||||||||| |||||||||||    
T  27988196 gaaattagggttaaagtgtagaattgatga 27988225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 26739801 - 26739863
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||||||||||||||||||  | |||||| ||||||| ||||||||||||||||||||    
T  26739801 gtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaag 26739863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 26731989 - 26732050
Alignment:
Q  22 taagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||||||||||||||||||  | |||||| ||||||| ||||||||||||||||||||    
T  26731989 taagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaag 26732050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 5888489 - 5888534
Alignment:
Q  117 ggttaaagtgaagaattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||    
T  5888489 ggttaaagtgaagaattgatgaacaatggttagattgatgtagaaa 5888534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 21327427 - 21327485
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaa 79  Q
    ||||| |||||||||||||||||| || |||||| | ||||| ||||||||| ||||||    
T  21327427 gtaagagtgagactaacattcaattttcttaagtctataattctgatgattagatttaa 21327485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 20572808 - 20572728
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaa 101  Q
    |||||||||||||||||||||||| ||  ||||  | | ||| ||||||||| |||||||| | || || |||||||||||    
T  20572808 gtaagggtgagactaacattcaattttggtaagcctatgattctgatgattagatttaacatgtgtaggtttagttttgaa 20572728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 40723464 - 40723524
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| |||| |||||||||||||    
T  40723464 gtaagggtgggactaacattcaatcttcttaagcctatgattttgataattaaatttaaca 40723524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 14281316 - 14281129
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  14281316 gtaagggtgagactaacattcaatcttattaagtatgtaattctgatgattaaatttaacaagggtgggattggttttggaggatttgagaattagggtt 14281217  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  14281216 aaagtgaagaatttatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 14281129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 21 - 201
Target Start/End: Original strand, 54797890 - 54798070
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  54797890 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 54797989  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtt 201  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  54797990 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgtt 54798070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 53081300 - 53081423
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||  ||||| ||| | || | |||  |||    
T  53081300 ttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtatgattaatttag-agaagttggaaat 53081398  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    ||||||||||||||  |||||||||    
T  53081399 tagggttaaagtgagaaattgatga 53081423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 26790303 - 26790198
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||| || |||||| | | ||| ||||||||| |||||||| | || || ||||||||  || |||||| ||||||| |     
T  26790303 gtaagggtgagactaacattcaattttcttaagtctatgattttgatgattagatttaacatgtgtaggtttagtttttgagaatttga-aattaggtta 26790205  T
Q  121 aaagtga 127  Q
    |||||||    
T  26790204 aaagtga 26790198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 26049619 - 26049684
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    |||| ||||||||| ||||||||||||||||| |||||  | | ||||||||||||| ||||||||    
T  26049619 ctaaggtaagggtgggactaacattcaatcttcttaagcctatgattatgatgattagatttaaca 26049684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 14852028 - 14852090
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||  ||||||||||||||||| |||||  | ||||| ||||||||| ||||||||||    
T  14852028 gtaagggttggactaacattcaatcttcttaagcctttaattctgatgattagatttaacaag 14852090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 51463025 - 51463066
Alignment:
Q  12 tattctaaagtaagggtgagactaacattcaatcttattaag 53  Q
    ||||| || ||||||||||||||||||||||||||| |||||    
T  51463025 tattccaaggtaagggtgagactaacattcaatcttcttaag 51463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 12611957 - 12611925
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  12611957 gtaagggtgagactaacattcaatcttcttaag 12611925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 15867994 - 15868026
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  15867994 aattgatgaaaaattgttagattgatgtagaaa 15868026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 23802410 - 23802442
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  23802410 gtaagggtgagactaacattcaatcttcttaag 23802442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 32306156 - 32306216
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  32306156 gtaagggtgggactaacattcaatcttcttaagcctatgattttgatgattagatttaaca 32306216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 32852246 - 32852214
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  32852246 aattgatgaaaaattgttagattgatgtagaaa 32852214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 117496 - 117316
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  117496 gtaagggtgagactaacattcaatcttattaagtctgtaattatgatgattaaatttaagaagggtgggattagttttggaggatttgagaattagggtt 117397  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtt 201  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  117396 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgtt 117316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 128095 - 128219
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| |||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||| || |||||||||||  || |||||| |||    
T  128095 ttctaaggtaagggtgagattagcattcaatcttattaagtttgtaattctgatgattaaatttaacaagtgtaggattagttttagagaatttgagaat 128194  T
Q  114 tagggttaa-agtgaagaattgatga 138  Q
    ||| ||||| |||| |||||||||||    
T  128195 tagagttaagagtg-agaattgatga 128219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 21619448 - 21619261
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||||||    
T  21619448 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgagattaattttggaggatttgagaattagggtt 21619349  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21619348 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatcagatgaattaaagtaataggtggtgttcatgttg 21619261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 36167597 - 36167410
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  36167597 gtaagggtgagactaacattcaatcttattaagtctgtaatcctgatgattaaatttaacaagggtgggattaattttggaggatttgagaattagggtt 36167498  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  36167497 aaagtgaggaattgatgaaaaattgttagattgatgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttg 36167410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 10551370 - 10551183
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  10551370 gtaagggtgagattaacattcaatcttattaagtctgtaatttcgatgattaaatttaacaagggtgggattagttttggaggatttgagaattagggtt 10551271  T
Q  121 aaagtgaagaattgatgaaaaattgttagattgacgtagaaagagtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||    
T  10551270 aaagtgcggaattgattaaaaattgttagattgatgtagaaagagtagataatctgatggattaaagtaataggtggtgttcatgttg 10551183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 43928061 - 43927913
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag-ggtgggattagttttgaaggatttgataa 112  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||| ||  ||||||||||  || ||||||||| |  || |||||| ||    
T  43928061 ttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatggttgtatttaacaagttgtaggattagttattgagaatttgagaa 43927962  T
Q  113 ttagggttaaagtgaagaattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  43927961 tta-ggttaaagtgaggaattgatgaaaaattgttagattgatgtagaaa 43927913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 28195581 - 28195472
Alignment:
Q  18 aaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagg 117  Q
    |||||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || |||||| |||||||    
T  28195581 aaagtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgagaattagg 28195482  T
Q  118 gttaaagtga 127  Q
    ||||| ||||    
T  28195481 gttaaggtga 28195472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 23275621 - 23275541
Alignment:
Q  12 tattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatt 92  Q
    |||||||| ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || |||||    
T  23275621 tattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 23275541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 17738238 - 17738151
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||| ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||| ||| || ||||| |||||    
T  17738238 ttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaataagtgtaggattggtttt 17738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 10557775 - 10557669
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||| | ||||||||  |||||||| ||||||| |||||||||||||||||||  || ||||| |||||  || |||||| ||||||||||    
T  10557775 gtaagggtgagaccagcattcaattctattaagtctgtaattctgatgattaaatttaacaactgtaggattggttttagagaatttgagaattagggtt 10557676  T
Q  121 aaagtga 127  Q
     ||||||    
T  10557675 caagtga 10557669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 45219416 - 45219531
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaagga--tttgataattaggg 118  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||| || |||||| |||  |||||  || || ||||| ||    
T  45219416 gtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-aatttaacaagagtaggattaattt--aaggaagttggagaatta-gg 45219511  T
Q  119 ttaaagtgaagaattgatga 138  Q
    ||||||||| ||||||||||    
T  45219512 ttaaagtgaggaattgatga 45219531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 19039558 - 19039486
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||| ||||||||||||||| ||||||||  |||||||| ||||||| ||||||||| ||||||||||    
T  19039558 ttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattagatttaacaag 19039486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 21838421 - 21838359
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||||||||| ||||||||  |||| ||| ||||||| ||||||||||||||||||||    
T  21838421 gtaagggtgagactagcattcaattatattgagtctgtaattctgatgattaaatttaacaag 21838359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 605519 - 605603
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    |||||| ||||||||||||||| |||| |||  |||||| ||| ||| ||||||||||| |||||||||| || ||||| |||||    
T  605519 ttctaaggtaagggtgagactagcatttaattctattaactatataactatgatgattagatttaacaagtgtaggattggtttt 605603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 44495592 - 44495524
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||| ||||||||| ||||||||||||||||| |||||| | | |||||||| |||| ||||||||    
T  44495592 attctaaggtaagggtgggactaacattcaatcttcttaagtctatgattatgataattagatttaaca 44495524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 22109478 - 22109598
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||||| | ||||  |||||||| ||||||| ||||  ||  |||| ||||| || ||||||  ||||||| | |||| |||    
T  22109478 ttctaaggtaagggtgagactaacttacaattatattaagtctgtaattctgatagttgtatttgacaagtgtaggatta-atttgaagaaattgagaat 22109576  T
Q  114 tagggttaaagtgaagaattga 135  Q
    ||||||||||| || |||||||    
T  22109577 tagggttaaagagaggaattga 22109598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 15207883 - 15207821
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||||||||||||||||||| || ||||   | ||||| ||||||||| ||||||||||    
T  15207883 gtaagggtgagactaacattcaattttcttaaacttataattctgatgattagatttaacaag 15207821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 22146762 - 22146804
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||    
T  22146762 ttattctaaggtaagggtgggactaacattcaatcttcttaag 22146804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 37250314 - 37250384
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagta-tgtaattatgatgattaaatttaacaag 83  Q
    |||||| ||||||||||||||||||||||||  ||||||||| | ||||| ||||| ||  ||||||||||    
T  37250314 ttctaaggtaagggtgagactaacattcaattctattaagtagtataattctgatggttgtatttaacaag 37250384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 22792220 - 22792179
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaa 52  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  22792220 ttattctaaggtaagggtgagactagcattcaattttattaa 22792179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 24339934 - 24339995
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaa-gtatgtaattatgatgatt 71  Q
    ||||||||| ||||||||||||||| ||||||||  ||||||  ||| ||||||||||||||    
T  24339934 ttattctaaggtaagggtgagactagcattcaattctattaatctatataattatgatgatt 24339995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 32402181 - 32402246
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    |||| ||||||||| ||||||||||||||  | |||||  ||||||| ||||||||| ||||||||    
T  32402181 ctaaggtaagggtgggactaacattcaattctcttaagcttgtaattctgatgattagatttaaca 32402246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 9578593 - 9578533
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  9578593 gtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaaca 9578533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 11202269 - 11202209
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||||||||| ||||||||||| |||||| | | ||| |||| |||| ||||||||    
T  11202269 gtaagggtgagactagcattcaatcttcttaagtctatgattctgataattagatttaaca 11202209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 14501994 - 14501962
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  14501994 aattgatgaaaaattgttagattgatgtagaaa 14501962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 50243859 - 50243827
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  50243859 gtaagggtgagactaacattcaatcttcttaag 50243827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 72626 - 72551
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtt 96  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  72626 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagtt 72551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 26053 - 25934
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||| || ||||| |||||  || |||||| |||    
T  26053 ttctaaggtaagggtgagactagcattcaatcttattaagcctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgagaat 25954  T
Q  114 tagggttaaagtgaagaattg 134  Q
    || ||||||||||| ||||||    
T  25953 ta-ggttaaagtgaggaattg 25934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 14294722 - 14294838
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgat 110  Q
    ||||||||| ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || ||||||     
T  14294722 ttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgag 14294821  T
Q  111 aattagggttaaagtga 127  Q
    |||||||||||| ||||    
T  14294822 aattagggttaaggtga 14294838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 51131514 - 51131398
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgat 110  Q
    ||||||||| ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || ||||||     
T  51131514 ttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgag 51131415  T
Q  111 aattagggttaaagtga 127  Q
    |||||||||||| ||||    
T  51131414 aattagggttaaggtga 51131398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 21343039 - 21342933
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||| ||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || |||||| ||||||||||    
T  21343039 gtaagggtgggactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgagaattagggtt 21342940  T
Q  121 aaagtga 127  Q
    |||||||    
T  21342939 aaagtga 21342933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 21347904 - 21347798
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||| ||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || |||||| ||||||||||    
T  21347904 gtaagggtgggactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgagaattagggtt 21347805  T
Q  121 aaagtga 127  Q
    |||||||    
T  21347804 aaagtga 21347798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 50687558 - 50687442
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || |||||| ||||| ||||    
T  50687558 gtaagagtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgagaatta-ggtt 50687460  T
Q  121 aaagtgaagaattgatga 138  Q
    |||| ||  |||||||||    
T  50687459 aaagggagaaattgatga 50687442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 50613236 - 50613360
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||  ||  |||||||||| || ||||| |||||  |  | |||| |||    
T  50613236 ttctaaggtaagggtgagactaacattcaatcctattaagtctgtaattatgattgttgtatttaacaagtgtaggatttgttttagaaaagttgagaat 50613335  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    ||||||||||||||  |||||||||    
T  50613336 tagggttaaagtgataaattgatga 50613360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 50621064 - 50621188
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||  ||  |||||||||| || ||||| |||||  |  | |||| |||    
T  50621064 ttctaaggtaagggtgagactaacattcaatcctattaagtctgtaattatgattgttgtatttaacaagtgtaggatttgttttagaaaagttgagaat 50621163  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    ||||||||||||||  |||||||||    
T  50621164 tagggttaaagtgataaattgatga 50621188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 27652388 - 27652473
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||| ||||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || | |||||||||    
T  27652388 attctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtagaattagtttt 27652473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 43629301 - 43629416
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaagga--tttgataattaggg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||| || |||||| |||  |||||  || || ||||| ||    
T  43629301 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatgatt-aatttaataagagtaggattaattt--aaggaagttggagaatta-gg 43629396  T
Q  119 ttaaagtgaagaattgatga 138  Q
    ||||||||| ||||||||||    
T  43629397 ttaaagtgaggaattgatga 43629416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 16093025 - 16093141
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||| ||||||||| | | |||   || |||||||||||| || || |||||  ||||  || |||||| ||||||||||    
T  16093025 gtaagggtgagactaacattcaattttattaagtctatgattcatataattaaatttaaccagtgtaggattgattttagagaatttgagaattagggtt 16093124  T
Q  121 aaagtgaagaattgatg 137  Q
    |||||||  ||||||||    
T  16093125 aaagtgagaaattgatg 16093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 16382083 - 16381965
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagg-gtgggattagttttgaaggatttgataattagggt 119  Q
    ||||||||| ||||| ||||||||  |||||||| |||||||   ||| ||  |||||||| |  || |||||||||||  ||||||||| |||||||||    
T  16382083 gtaagggtgggactagcattcaattctattaagtctgtaattcatatggttgtatttaacatgttgtaggattagtttttgaggatttgagaattagggt 16381984  T
Q  120 taaagtgaagaattgatga 138  Q
    |||||||| ||||||||||    
T  16381983 taaagtgaggaattgatga 16381965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 21683944 - 21683883
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaa 82  Q
    |||||||||||||||||||||||| || |||||| | ||||| ||||| ||| |||||||||    
T  21683944 gtaagggtgagactaacattcaattttcttaagtctataattctgatggttagatttaacaa 21683883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 52940031 - 52940091
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||| ||||||||||||||||||||| |||||  | ||||| ||||||||| ||||||||    
T  52940031 gtaagagtgagactaacattcaatcttcttaagcctttaattctgatgattagatttaaca 52940091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 21042502 - 21042569
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    |||||| ||||||||| ||||||||||||||||| |||||  | | |||||||| |||| ||||||||    
T  21042502 ttctaaggtaagggtgggactaacattcaatcttcttaagcctatgattatgataattagatttaaca 21042569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 22921063 - 22921096
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaat 44  Q
    ||||||||| ||||||||||||||||||||||||    
T  22921063 ttattctaaggtaagggtgagactaacattcaat 22921096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 41049169 - 41049293
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaag-tatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataa 112  Q
    |||||| ||||||||||||||| ||||||||  ||||||| | | ||||||||||| ||  ||| |||||| || ||||||  |||| || | |||  ||    
T  41049169 ttctaaggtaagggtgagactagcattcaattctattaagttgtataattatgatggttgtattcaacaagtgtaggatta-atttggagaagttggaaa 41049267  T
Q  113 ttagggttaaagtgaagaattgatga 138  Q
    |||||||||||||||  |||||||||    
T  41049268 ttagggttaaagtgagaaattgatga 41049293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 13880542 - 13880602
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  ||| ||| |||| |||| ||||||||    
T  13880542 gtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaaca 13880602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 20453640 - 20453672
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  20453640 gtaagggtgagactaacattcaatcttcttaag 20453672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 20959077 - 20959017
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  20959077 gtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaaca 20959017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 27652515 - 27652547
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  27652515 aattgatgaaaaattgttagattgatgtagaaa 27652547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 48521459 - 48521399
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  ||| ||| |||| |||| ||||||||    
T  48521459 gtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaaca 48521399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 50687439 - 50687407
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  50687439 aattgatgaaaaattgttagattgatgtagaaa 50687407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 1004 - 887
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||| || ||||| |||||||| || |||||| | ||||||||||||||| |||||||| | || || ||||||||  ||||||||| ||||||||||    
T  1004 gtaaggctgggactagcattcaattttcttaagtctataattatgatgattagatttaacatgtgtaggtttagtttttgaggatttgagaattagggtt 905  T
Q  121 aaagtgaagaattgatga 138  Q
    ||||||||||||||||||    
T  904 aaagtgaagaattgatga 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 1494 - 1371
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||| |||||||||||||||||| | ||||| |||||||| ||||||||||| || |||||||||| | || | |||  |||    
T  1494 ttctaaggtaagggtgagactagcattcaatcttattaagtctataattctgatgattgaatttaacaagtgtaggattagtttag-agaagttggaaat 1396  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    ||||||||||||||  |||||||||    
T  1395 tagggttaaagtgagaaattgatga 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 7623 - 7512
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||| | || |||||| ||||||||||    
T  7623 gtaagggtgagactaacattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggtttag-agaatttgagaattagggtt 7525  T
Q  121 aaagtgaagaatt 133  Q
    | |||||| ||||    
T  7524 atagtgaaaaatt 7512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 241 - 357
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgat 110  Q
    |||||||||  |||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||||| || ||||| |||||  || ||||||     
T  241 ttattctaagataagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgag 340  T
Q  111 aattagggttaaagtga 127  Q
    |||||||||||| ||||    
T  341 aattagggttaaggtga 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 5464 - 5581
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| ||  |||||||||| || |||||||||||  || | |||  || |||||||    
T  5464 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatggttgtatttaacaagtgtaggattagttttagagaagttggaaactagggtt 5563  T
Q  121 aaagtgaagaattgatga 138  Q
    |||||||  |||||||||    
T  5564 aaagtgagaaattgatga 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 2979 - 2902
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| || |||||||||||    
T  2979 gtaagggtgagactagcattcaatcttattaagtctttaattctgatgattaaatttaacaagtgtaggattagtttt 2902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 17369 - 17446
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| ||  |||||||||| || |||||||||||    
T  17369 gtaagggtgagactaacattcaatcttattaagtctgtaattctgatggttgtatttaacaagtgtaggattagtttt 17446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 13839 - 13806
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaat 44  Q
    ||||||||| ||||||||||||||||||||||||    
T  13839 ttattctaaggtaagggtgagactaacattcaat 13806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 22491 - 22619
Alignment:
Q  9 gattattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttg 108  Q
    ||||||||||| ||||||||||||||| ||| ||||| |||||||| ||||||| ||||| ||  |||||||||| || || ||||||||  || |||||    
T  22491 gattattctaaggtaagggtgagactagcatgcaatcctattaagtctgtaattctgatggttttatttaacaagtgtagggttagttttagagaatttg 22590  T
Q  109 ataattagggttaaagtgaagaattgatga 138  Q
    | ||||| |||||||||||  |||||||||    
T  22591 agaatta-ggttaaagtgagaaattgatga 22619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 39292 - 39168
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataat 113  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||| | ||| ||  |||||||||| || ||||| |||||  |  | |||| |||    
T  39292 ttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctaatggttgtatttaacaagtgtaggatttgttttagaaaagttgagaat 39193  T
Q  114 tagggttaaagtgaagaattgatga 138  Q
    ||||||||||||||  |||||||||    
T  39192 tagggttaaagtgagaaattgatga 39168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 46237 - 46308
Alignment:
Q  12 tattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||| ||||||||||||||| ||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  46237 tattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaag 46308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 18855 - 18963
Alignment:
Q  19 aagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag-ggtgggattagttttgaaggatttgataattagg 117  Q
    |||||||||||||||||||||||||| || |||||| | ||||| ||||||||| ||||||||||  || |||||||||||  || ||| || |||||||    
T  18855 aagtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagtttttgagaattgga-aattagg 18953  T
Q  118 gttaaagtga 127  Q
    ||||||||||    
T  18954 gttaaagtga 18963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 2692 - 2630
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||||||||||||||||||||| |||||| | ||||| ||||||||| ||||||||||    
T  2692 gtaagggtgagactaacattcaatcttcttaagtctataattctgatgattagatttaacaag 2630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 79367 - 79301
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaagtatgt-aattatgatgattaaattta 78  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||    
T  79367 attctaaggtaagggtgagactaacattcaatcttattaagtctgtaaattctaatgattaaattta 79301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 78989 - 78906
Alignment:
Q  70 ttaaatttaacaagggtgggattagttttgaaggatttgataattagggttaaagtgaagaattgatgaaaaattgttagattga 154  Q
    |||||||||| ||| || ||||| |||||  ||||||||| ||||||| |||||||||  ||||||||||||||||||| |||||    
T  78989 ttaaatttaataagtgtaggattggttttagaggatttgaaaattagg-ttaaagtgattaattgatgaaaaattgttatattga 78906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 203544 - 203607
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag-tatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||||||||||||||||||||| ||||| | | ||||| ||||| ||| ||||||||||    
T  203544 gtaagggtgagactaacattcaatcttcttaagctttataattctgatggttagatttaacaag 203607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 84451 - 84575
Alignment:
Q  12 tattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaagga--tttga 109  Q
    ||||| || ||||||||||||||| |||||||||||||||||| ||||||| |||||||| | ||||||||| || |||||| |||  |||||  || ||    
T  84451 tattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattt--aaggaagttgga 84547  T
Q  110 taattagggttaaagtgaagaattgatga 138  Q
     ||||| ||||||||||| ||||||||||    
T  84548 gaatta-ggttaaagtgaggaattgatga 84575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 447461 - 447401
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  447461 gtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaaca 447401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 86511 - 86435
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatta 93  Q
    |||| ||||||||||||||| ||||||||| |||||||| ||||||| |||||||| ||||||||||| || ||||||    
T  86511 ctaaggtaagggtgagactagcattcaatcctattaagtctgtaattctgatgatt-aatttaacaagtgtaggatta 86435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 333285 - 333178
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag-ggtgggattagttttgaaggatttgataattagggt 119  Q
    |||||||||||||||||||||||| || |||||| | ||||| ||||||||| ||||||||||  || |||||||||||    || |||  |||||||||    
T  333285 gtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagttttttgagaattggaaattagggt 333186  T
Q  120 taaagtga 127  Q
    ||||||||    
T  333185 taaagtga 333178  T

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Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 62330 - 62395
Alignment:
Q  16 ctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaa 82  Q
    |||| ||||||||||||||| |||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  62330 ctaaggtaagggtgagactagcattcaatcttaataagtctgtaattctgatgatt-aatttaacaa 62395  T

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Target: scaffold0072; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 58781 - 58748
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagt 54  Q
    |||||||||||||||||||||||| |||||||||    
T  58781 gtaagggtgagactaacattcaattttattaagt 58748  T

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Target: scaffold0169 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 28700 - 28762
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    ||||||||| ||||||||||||||||| |||||  | ||||| ||||||||| ||||||||||    
T  28700 gtaagggtgggactaacattcaatcttcttaagcctttaattctgatgattagatttaacaag 28762  T

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Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 9849 - 9772
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||||||||||||||||||||| |||||  | | ||| ||||||||| |||||||| | || || ||||||||    
T  9849 gtaagggtgagactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgtgtaggtttagtttt 9772  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 37287 - 37364
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||||||||||||||||||||||| |||||  | | ||| ||||||||| |||||||| | || || ||||||||    
T  37287 gtaagggtgagactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgtgtaggtttagtttt 37364  T

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Target: scaffold1835 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 255 - 195
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | ||||| ||||||||| ||||||||    
T  255 gtaagggtgcgactaacattcaatcttcttaagcctttaattctgatgattagatttaaca 195  T

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Target: scaffold1439 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 1130 - 1090
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  1130 attctaaggtaagggtgagactaacattcaatcttcttaag 1090  T

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Target: scaffold0320 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 12918 - 12838
Alignment:
Q  12 tattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatt 92  Q
    |||||||| ||||||||||||||||| | ||||  |||||||| ||||||| ||||| ||  |||||||||| || |||||    
T  12918 tattctaaggtaagggtgagactaacttacaattctattaagtctgtaattctgatggttgtatttaacaagtgtaggatt 12838  T

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Target: scaffold0145 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 10785 - 10725
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||    ||||| ||||||||||||||||||    
T  10785 gtaagggtgggactaacattcaatcttcttaagccgttaattctgatgattaaatttaaca 10725  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 163551 - 163619
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaa 79  Q
    ||||||||| |||| |||||||||||||||||||||| |||||  | | ||| |||| |||||||||||    
T  163551 ttattctaaggtaacggtgagactaacattcaatcttcttaagcctatgattctgataattaaatttaa 163619  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 268617 - 268545
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggatta 93  Q
    |||||||||||||||  |||||||  |||||||  ||||||| ||||||||| |||||||||| || ||||||    
T  268617 gtaagggtgagactattattcaattatattaagcctgtaattctgatgattagatttaacaagtgtaggatta 268545  T

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Target: scaffold0108 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 4085 - 4018
Alignment:
Q  14 ttctaaagtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    |||||| |||||||||||||||||||| |||||| |||||  | | |||||||| |||| ||||||||    
T  4085 ttctaaggtaagggtgagactaacatttaatcttcttaagcctatgattatgataattagatttaaca 4018  T

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Target: scaffold0750 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 4585 - 4523
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||| ||||||||||||||| || |||||  | ||||| ||||||||| ||||||||||    
T  4585 gtaagggtcagactaacattcaattttcttaagcttataattctgatgattagatttaacaag 4523  T

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Target: scaffold0130 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 901 - 987
Alignment:
Q  13 attctaaagtaagggtgagactaacattcaatcttattaa-gtatgtaattatgatgattaaatttaacaagggtgggattagtttt 98  Q
    ||||||| ||||||||||||||| |||||||| |||||||  ||| ||||| ||||| ||  |||||||||| || |||||| ||||    
T  901 attctaaggtaagggtgagactagcattcaattttattaatctatataattctgatggttgtatttaacaagtgtaggattaatttt 987  T

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Target: scaffold0046 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 16089 - 16151
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||||||||||||||||||| || |||||| | |||||  |||||||| ||||| ||||    
T  16089 gtaagggtgagactaacattcaattttcttaagtctataattcggatgattagatttagcaag 16151  T

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Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 25276 - 25338
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaag 83  Q
    |||||||||||||||||||||||| || ||||||   ||||| ||||||||| ||||| ||||    
T  25276 gtaagggtgagactaacattcaattttcttaagtcgataattctgatgattagatttagcaag 25338  T

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Target: scaffold0333 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 7538 - 7505
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaat 44  Q
    ||||||||| ||||||||||||||||||||||||    
T  7538 ttattctaaggtaagggtgagactaacattcaat 7505  T

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Target: scaffold0333; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 14918 - 14885
Alignment:
Q  11 ttattctaaagtaagggtgagactaacattcaat 44  Q
    ||||||||| ||||||||||||||||||||||||    
T  14918 ttattctaaggtaagggtgagactaacattcaat 14885  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 220338 - 220437
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaacaagggtgggattagttttgaaggatttgataattagggtt 120  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||| | ||| || ||||||||  || |||||| ||||||||||    
T  220338 gtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaac-atggtaggtttagtttttgagaatttga-aattagggtt 220435  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 4793 - 4761
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  4793 aattgatgaaaaattgttagattgatgtagaaa 4761  T

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Target: scaffold0293 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 19304 - 19336
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  19304 gtaagggtgagactaacattcaatcttcttaag 19336  T

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Target: scaffold0261 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 17592 - 17624
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  17592 aattgatgaaaaattgttagattgatgtagaaa 17624  T

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Target: scaffold0256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 1971 - 2015
Alignment:
Q  164 agtagataatcagatgaattaaagtaataggtggtgtttatgttg 208  Q
    ||||||||||| |||||||||| |||||| |||||||| ||||||    
T  1971 agtagataatctgatgaattaaggtaataagtggtgttcatgttg 2015  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 33793 - 33825
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  33793 aattgatgaaaaattgttagattgatgtagaaa 33825  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 29556 - 29524
Alignment:
Q  130 aattgatgaaaaattgttagattgacgtagaaa 162  Q
    ||||||||||||||||||||||||| |||||||    
T  29556 aattgatgaaaaattgttagattgatgtagaaa 29524  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 32190 - 32158
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaag 53  Q
    ||||||||||||||||||||||||||| |||||    
T  32190 gtaagggtgagactaacattcaatcttcttaag 32158  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 7257 - 7197
Alignment:
Q  21 gtaagggtgagactaacattcaatcttattaagtatgtaattatgatgattaaatttaaca 81  Q
    ||||||||| ||||||||||||||||| |||||  | | ||| ||||||||| ||||||||    
T  7257 gtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattatatttaaca 7197  T

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