View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17166_low_69 (Length: 296)
Name: NF17166_low_69
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17166_low_69 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 12 - 277
Target Start/End: Original strand, 7033652 - 7033917
Alignment:
| Q |
12 |
atgaagttgaaaaatgaaaaattaattatctagcacatgaagtacagacacaaacacgaacacaagatgcatacaccaacatcgatattagtttagaaaa |
111 |
Q |
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| T |
7033652 |
atgaagttgaaaaatgaaaaattaattatctagcgcatgaagtacggacacaaacacgaacataagatacatacaccgacatcgatattagttaagaaaa |
7033751 |
T |
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| Q |
112 |
ataatataatttaacgtaaacacgtgtattagtgtcaatactgacgcttattggacatctgacacatctttgataataagtatagatgctccgacataaa |
211 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||| |
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| T |
7033752 |
ataatataatttaacgtaaatacgtgtattagtgtcaatactgacgcttgttggacatctgacacgtttttgataataaatatagatgctccgacataaa |
7033851 |
T |
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| Q |
212 |
agtgacttttaaaacaaagtgtgaatgtgttggccaaattatgagaccaatatagtgaagtggcaa |
277 |
Q |
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| T |
7033852 |
agtgacttttaaaacaaagtgtgaatgtgttgggcaaattatgagaccaatatagtgaagtggcaa |
7033917 |
T |
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