View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17166_low_92 (Length: 254)
Name: NF17166_low_92
Description: NF17166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17166_low_92 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 44262568 - 44262789
Alignment:
| Q |
14 |
aagaatattggtttgttatgccattaattgatgggatgtatgtgtatctttaagtcccatttcagttatcggatggataggaatagaattactctaatct |
113 |
Q |
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| T |
44262568 |
aagaatattggtttgttatgccattaattgatgggatgtatgtgtatctttaagtcccatttcagttatcggatggataggaatagaattactctaatct |
44262667 |
T |
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| Q |
114 |
tcgcaagtagttatcgaatggataagtatagaatacatggcctgctttcattcctacaagcattaggacagtctggtttggcatgactactgcaattgct |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
44262668 |
tcgcaagtagttatcgaatggataagtatagaatacatggcctgctttcattcctacaagcattaggacagtctggtttggcatgactactgcaattgtt |
44262767 |
T |
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| Q |
214 |
gttgttctgtttgtgtagttaa |
235 |
Q |
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|||||||||||||||||||||| |
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| T |
44262768 |
gttgttctgtttgtgtagttaa |
44262789 |
T |
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