View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17168_high_32 (Length: 413)

Name: NF17168_high_32
Description: NF17168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17168_high_32
NF17168_high_32
[»] chr4 (32 HSPs)
chr4 (93-395)||(32122731-32123053)
chr4 (1-94)||(711958-712051)
chr4 (1-92)||(17619161-17619252)
chr4 (1-93)||(32728356-32728448)
chr4 (1-92)||(55272385-55272476)
chr4 (12-94)||(960890-960972)
chr4 (1-90)||(3756255-3756344)
chr4 (2-95)||(35037002-35037095)
chr4 (2-95)||(46827716-46827809)
chr4 (1-93)||(48435588-48435680)
chr4 (4-96)||(55966358-55966450)
chr4 (5-94)||(28982835-28982924)
chr4 (4-95)||(28988470-28988561)
chr4 (4-95)||(23035977-23036068)
chr4 (7-94)||(25051691-25051778)
chr4 (4-95)||(27864561-27864652)
chr4 (4-91)||(41878407-41878494)
chr4 (4-94)||(1771278-1771368)
chr4 (4-90)||(27893854-27893940)
chr4 (4-94)||(33703139-33703229)
chr4 (1-90)||(38851515-38851604)
chr4 (12-93)||(49229684-49229765)
chr4 (1-93)||(48463459-48463551)
chr4 (8-90)||(41327559-41327641)
chr4 (4-89)||(23204790-23204875)
chr4 (7-92)||(12496956-12497041)
chr4 (4-92)||(27316725-27316813)
chr4 (4-92)||(27550309-27550397)
chr4 (56-92)||(36004168-36004204)
chr4 (1-93)||(21687005-21687097)
chr4 (4-92)||(41847971-41848059)
chr4 (4-92)||(45490325-45490413)
[»] chr8 (26 HSPs)
chr8 (1-95)||(35181513-35181607)
chr8 (1-94)||(34304786-34304879)
chr8 (1-93)||(16603635-16603727)
chr8 (1-93)||(18066727-18066819)
chr8 (1-95)||(33630002-33630096)
chr8 (1-91)||(16358842-16358933)
chr8 (4-95)||(36743495-36743586)
chr8 (4-92)||(11582766-11582854)
chr8 (4-95)||(5754900-5754991)
chr8 (52-95)||(19386630-19386673)
chr8 (4-95)||(30660754-30660845)
chr8 (4-90)||(26125637-26125723)
chr8 (4-90)||(42699259-42699345)
chr8 (4-93)||(42197447-42197536)
chr8 (4-92)||(29705362-29705450)
chr8 (4-95)||(42295192-42295283)
chr8 (4-91)||(45397317-45397404)
chr8 (4-90)||(29800962-29801048)
chr8 (56-95)||(10678204-10678243)
chr8 (6-92)||(1375542-1375628)
chr8 (4-90)||(20148762-20148848)
chr8 (5-90)||(30912575-30912660)
chr8 (4-93)||(31384663-31384752)
chr8 (4-93)||(2546995-2547084)
chr8 (1-38)||(10678161-10678198)
chr8 (4-92)||(2165975-2166063)
[»] chr2 (29 HSPs)
chr2 (1-95)||(43114554-43114648)
chr2 (1-94)||(16803966-16804059)
chr2 (1-94)||(16843248-16843341)
chr2 (1-90)||(11825663-11825752)
chr2 (1-90)||(41281983-41282072)
chr2 (1-93)||(18491704-18491796)
chr2 (1-92)||(12415469-12415560)
chr2 (1-92)||(12427529-12427620)
chr2 (1-94)||(966843-966936)
chr2 (1-90)||(4299429-4299518)
chr2 (1-97)||(34895750-34895846)
chr2 (7-90)||(6518484-6518566)
chr2 (4-92)||(1750414-1750502)
chr2 (4-95)||(12302265-12302356)
chr2 (10-93)||(14285675-14285758)
chr2 (4-91)||(19047158-19047245)
chr2 (4-91)||(34817788-34817875)
chr2 (4-93)||(30838631-30838720)
chr2 (4-95)||(4764738-4764829)
chr2 (4-90)||(43490413-43490499)
chr2 (4-92)||(16096747-16096835)
chr2 (6-94)||(43335777-43335865)
chr2 (1-68)||(4451959-4452026)
chr2 (7-90)||(8896598-8896681)
chr2 (6-93)||(42026766-42026855)
chr2 (49-90)||(7070418-7070459)
chr2 (53-93)||(4452026-4452066)
chr2 (4-92)||(13780747-13780835)
chr2 (56-92)||(42849910-42849946)
[»] chr1 (20 HSPs)
chr1 (1-94)||(44112675-44112768)
chr1 (1-92)||(38335918-38336009)
chr1 (1-92)||(48119628-48119719)
chr1 (1-93)||(38113204-38113296)
chr1 (1-93)||(41065152-41065244)
chr1 (1-92)||(35003294-35003385)
chr1 (1-93)||(45427754-45427846)
chr1 (1-92)||(46168383-46168474)
chr1 (1-94)||(45639741-45639834)
chr1 (1-93)||(45705824-45705916)
chr1 (4-95)||(5489773-5489864)
chr1 (47-94)||(14427345-14427392)
chr1 (4-92)||(43571098-43571186)
chr1 (1-94)||(26585460-26585553)
chr1 (4-95)||(23989535-23989627)
chr1 (4-92)||(37814778-37814866)
chr1 (1-92)||(35000122-35000213)
chr1 (4-90)||(2497574-2497660)
chr1 (4-94)||(48498974-48499064)
chr1 (4-92)||(50448272-50448360)
[»] chr3 (23 HSPs)
chr3 (1-95)||(9434121-9434215)
chr3 (1-94)||(10457901-10457994)
chr3 (1-95)||(4190274-4190368)
chr3 (2-93)||(25996267-25996358)
chr3 (1-92)||(51757593-51757684)
chr3 (1-92)||(34791829-34791920)
chr3 (1-94)||(52627986-52628079)
chr3 (4-91)||(40480750-40480837)
chr3 (4-97)||(54237091-54237184)
chr3 (4-95)||(24688414-24688505)
chr3 (4-95)||(54246160-54246251)
chr3 (4-90)||(53581870-53581956)
chr3 (4-93)||(25413680-25413769)
chr3 (4-92)||(36150130-36150218)
chr3 (4-92)||(42100688-42100776)
chr3 (4-92)||(45126940-45127028)
chr3 (4-91)||(42394431-42394518)
chr3 (4-95)||(46941050-46941141)
chr3 (4-94)||(40808863-40808953)
chr3 (1-90)||(27748565-27748654)
chr3 (1-94)||(53273693-53273786)
chr3 (4-94)||(47191038-47191127)
chr3 (7-95)||(29558249-29558337)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-90)||(45728-45817)
[»] chr7 (24 HSPs)
chr7 (2-95)||(40236916-40237009)
chr7 (1-91)||(31408642-31408732)
chr7 (1-92)||(31513287-31513378)
chr7 (1-95)||(27535240-27535334)
chr7 (4-92)||(24001024-24001112)
chr7 (4-92)||(42538443-42538531)
chr7 (1-95)||(33384867-33384962)
chr7 (7-93)||(43317442-43317528)
chr7 (7-93)||(5194246-5194332)
chr7 (4-90)||(10573751-10573837)
chr7 (7-93)||(24280611-24280697)
chr7 (1-90)||(4638208-4638297)
chr7 (4-93)||(9216301-9216389)
chr7 (4-89)||(26898414-26898499)
chr7 (4-92)||(5810936-5811024)
chr7 (4-94)||(41861672-41861764)
chr7 (4-93)||(35069720-35069809)
chr7 (4-95)||(5015392-5015483)
chr7 (4-90)||(43343636-43343722)
chr7 (4-90)||(44326180-44326266)
chr7 (4-90)||(44416946-44417032)
chr7 (47-92)||(39998408-39998453)
chr7 (4-92)||(42972852-42972940)
chr7 (4-76)||(27393272-27393344)
[»] chr6 (17 HSPs)
chr6 (1-90)||(27441544-27441633)
chr6 (1-94)||(33242401-33242494)
chr6 (1-92)||(33253913-33254004)
chr6 (4-93)||(9698345-9698434)
chr6 (1-95)||(3213397-3213491)
chr6 (7-95)||(7273350-7273438)
chr6 (4-92)||(13743233-13743321)
chr6 (4-92)||(13748733-13748821)
chr6 (4-95)||(7292744-7292835)
chr6 (4-95)||(7367546-7367637)
chr6 (4-95)||(26670021-26670112)
chr6 (1-92)||(30014343-30014434)
chr6 (4-90)||(24203999-24204085)
chr6 (4-95)||(26466796-26466887)
chr6 (4-93)||(21279928-21280017)
chr6 (38-93)||(31109268-31109323)
chr6 (4-93)||(21293689-21293778)
[»] chr5 (12 HSPs)
chr5 (1-93)||(17208073-17208165)
chr5 (1-92)||(32473403-32473494)
chr5 (1-95)||(30622728-30622821)
chr5 (4-92)||(2614661-2614749)
chr5 (4-92)||(41334675-41334763)
chr5 (4-95)||(7617130-7617221)
chr5 (4-94)||(18033980-18034070)
chr5 (4-95)||(5256992-5257083)
chr5 (4-92)||(22512305-22512393)
chr5 (7-94)||(38470577-38470664)
chr5 (20-92)||(33855071-33855143)
chr5 (4-94)||(33801467-33801557)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-92)||(35465-35556)
[»] scaffold0187 (2 HSPs)
scaffold0187 (4-93)||(14200-14289)
scaffold0187 (4-93)||(24528-24617)
[»] scaffold0119 (1 HSPs)
scaffold0119 (4-95)||(682-773)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-91)||(112656-112743)
[»] scaffold0385 (1 HSPs)
scaffold0385 (4-94)||(11249-11339)
[»] scaffold0157 (1 HSPs)
scaffold0157 (7-92)||(23436-23521)


Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 93 - 395
Target Start/End: Original strand, 32122731 - 32123053
Alignment:
Q  93 tttcctaaccctaaggatagctcctaatggaatgatcagatgtgtttttaggtgtagatggggcaatattatttttctctttccattccctaaacctttc 192  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32122731 tttcctaaccctaaggatagctcctaatggaatgatcagaggtgtttttaggtgtagatggggcaatattatttttctctttccattccctaaacctttc 32122830  T
Q  193 tagtttcctctcattaatttgcccctttattggtagtaagatcttattattcataattttctacgtgaattttgag--------------------ttca 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||                    ||      
T  32122831 tagtttcctctcattaatttgcccctttattggtagtaagatcttattattcataattttctacgttaattttgagtactaagcatctttataacttttt 32122930  T
Q  273 ctaaggtaatattgatactatcaacataaattatgttagtgtcatgtcttcctccaattgtggaggggtaactttcaagcttatgttgttgtacttatat 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32122931 ctaaggtaatattgatactatcaacataaattatgttagtgtcatgtcttcctccaattgtggaggggtaactttcaagcttatgttgttgtacttatat 32123030  T
Q  373 ctatatatttcgactagctaagt 395  Q
    |||||||||||||||||||||||    
T  32123031 ctatatatttcgactagctaagt 32123053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 712051 - 711958
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||| |||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  712051 gtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 711958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17619161 - 17619252
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  17619161 gtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32728448 - 32728356
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||| |||||||||||| |||| ||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  32728448 gtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 32728356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 55272385 - 55272476
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | |||||||||||| || |||||||||| ||||||||||||||| |||||||||||||||||||    
T  55272385 gtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 960890 - 960972
Alignment:
Q  12 agatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||| |||||||| ||||| ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcctt 960972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3756255 - 3756344
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||| ||||||||| || |||| ||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  3756255 gtatgattgtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 35037095 - 35037002
Alignment:
Q  2 tatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||||| |||||||| | |||||||||||| || |||||||||| ||||||| |||||||||| |||||||||||||| ||||    
T  35037095 tatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttttcttt 35037002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 46827716 - 46827809
Alignment:
Q  2 tatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||| ||||||||| || ||||||||  || |||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46827716 tatgtttgtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttccttt 46827809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48435588 - 48435680
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||| |||||||||||| |||||||  ||||| |||||||| || ||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  48435588 gtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcct 48435680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 55966358 - 55966450
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctttc 96  Q
    ||||||||||||||| |||||||| | ||| |||| ||| ||||||||||| || ||||||| ||||||||||| ||||||||||||||||||    
T  55966358 tggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcctttc 55966450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 28982835 - 28982924
Alignment:
Q  5 ggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    |||||||||||||| |||||||| | ||| ||||  || |||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  28982835 ggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcctt 28982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 28988561 - 28988470
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||| ||||||||| ||| |||| ||||| || ||||| || ||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  28988561 tggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttccttt 28988470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 23036068 - 23035977
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||| ||| | ||| ||||  ||||| |||||||||||||||| || ||||||  |||||||||||||||||||||    
T  23036068 tggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttccttt 23035977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 25051778 - 25051691
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    |||||||||||| |||||||| | ||| |||| |||||| |||||||| ||||||| || ||||| |||||||||| |||||||||||    
T  25051778 ttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcctt 25051691  T

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Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 27864652 - 27864561
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || |||||||| || ||||||| |||| |||||| |||||||||||||||||    
T  27864652 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttccttt 27864561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 41878494 - 41878407
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| ||| |||| | ||| ||||| ||||| ||||||||  ||||||||| ||||| |||||||||||||||||||    
T  41878494 tggttgtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 1771278 - 1771368
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| ||| |||| | ||  |||| ||| || |||||||| ||||||| || ||||||||||||||||||||||||||||    
T  1771278 tggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcctt 1771368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 27893854 - 27893940
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||||| | ||| |||| ||| || |||||||| || ||||||| |||| |||||| ||||||||||||    
T  27893854 tggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 33703229 - 33703139
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || ||||||||| | ||||  | ||||||||||||||||||||||||||||    
T  33703229 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcctt 33703139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38851604 - 38851515
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||| ||| |||| ||||| |||||||| |  |||||| || | |||||||||||||| | |||||||||||||||    
T  38851604 gtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaacatttt 38851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 49229684 - 49229765
Alignment:
Q  12 agatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||| |||||| | | ||||||||||||    |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcct 49229765  T

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Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48463459 - 48463551
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||| |||||||| | ||| |||| ||| |||||||||||    ||||||| |||| |||||| |||||||||||||||    
T  48463459 gtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcct 48463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 41327559 - 41327641
Alignment:
Q  8 tgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||| |||||||| ||||| || |||||| | |||||||| |||||| ||| ||||||||||  ||||||||||||    
T  41327559 tgtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 23204790 - 23204875
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattt 89  Q
    ||||||||| ||||| |||| ||| | ||| |||| ||||||||||||||| || |||| || ||||| |||||||||||||||||    
T  23204790 tggttgtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 12497041 - 12496956
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||| ||||||| |||||||| | ||  |||| ||| ||||||||||| | ||||| || |||||||||||||| |||||||||||    
T  12497041 ttgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 27316725 - 27316813
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||| ||||||||| |||||||| | |||||||| ||| || |||| |||  |||||| || |||||||||||| | |||||||||||    
T  27316725 tggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 27550397 - 27550309
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||| ||||||| |||||||| | ||| |||| |||  | |||||||| | |||||  | ||||||||||||||||||||||||||    
T  27550397 tggttgtaagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 36004168 - 36004204
Alignment:
Q  56 gggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36004168 gggtgtatgattaaagggtattcatgtaacattttcc 36004204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21687097 - 21687005
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||| ||||||||| |||| ||| | |   |||| |||| |||||| ||| |||||||  | |||||| ||||||||||||||||||||    
T  21687097 gtatggttatgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttcct 21687005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 41848059 - 41847971
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||| |||||| || ||||| ||||  |||||||| || ||||||||  ||||| |||  ||||| ||||| |||||||||||||    
T  41848059 tggttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 45490325 - 45490413
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||| ||| | ||| |||| |||  | |||||||| || ||||| | ||||  ||||||||||||||||||||    
T  45490325 tggttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 35181607 - 35181513
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35181607 gtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 35181513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34304879 - 34304786
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||    
T  34304879 gtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcctt 34304786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16603635 - 16603727
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||| |||||||| |||| ||||||||| || |||| |||| |||||||||||||||||||| ||||||||||||||||    
T  16603635 gtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcct 16603727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18066727 - 18066819
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||| ||| | ||| |||| ||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18066727 gtatggttgtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcct 18066819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33630002 - 33630096
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||| |||||||||||||||||| ||| ||||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||| ||||    
T  33630002 gtatagttgtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttttcttt 33630096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16358842 - 16358933
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttc-atgtaacattttc 91  Q
    |||||||||||||||||| ||| |||| | | |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  16358842 gtatggttgtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaacattttc 16358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 36743495 - 36743586
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || |||||||||||||||||||||||||||||    
T  36743495 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccttt 36743586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 11582854 - 11582766
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || ||||||||||||||||||||||||||    
T  11582854 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 5754991 - 5754900
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| ||||  || ||||||||||| || |||| || |||| ||||||||||||||||||||||||    
T  5754991 tggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttccttt 5754900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 19386630 - 19386673
Alignment:
Q  52 aatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19386630 aatagggtgtatgattaaagggtgttcatgtaacattttccttt 19386673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 30660754 - 30660845
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||| ||||||| |||||||| | ||| |||| |||||| |||||||| || ||||  | |||||||||||||||||||||||||||||    
T  30660754 tggttgtaagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttccttt 30660845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 26125723 - 26125637
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| |  ||||||| ||||||||||| ||||||||||||    
T  26125723 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 42699345 - 42699259
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||| ||| | ||| |||| |||| | |||||||| ||||||| || ||||||||||||||||||||||||    
T  42699345 tggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 42197447 - 42197536
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| | ||| |||| |||||  ||| |||| ||||||| || |||| ||||||||||||||||||||||    
T  42197447 tggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcct 42197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 29705450 - 29705362
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| ||| |||| | ||| |||| ||| || |||||||| |||||||  | ||||||||||||||||||||||||||    
T  29705450 tggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 42295283 - 42295192
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| ||| |  ||||||||  |||||| || |||||||||||||||||||||||| ||||    
T  42295283 tggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttttcttt 42295192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 45397404 - 45397317
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| |||| ||| | ||| |||| |||||| |||| ||| ||||||| || ||||||||||||| |||||||||||    
T  45397404 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 29800962 - 29801048
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || |||||||| || ||||||| |||| |||||| ||||||||||||    
T  29800962 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 10678204 - 10678243
Alignment:
Q  56 gggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  10678204 gggtgtatgattaaagggtattcatgtaacattttccttt 10678243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 1375628 - 1375542
Alignment:
Q  6 gttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||| || |||||||| | ||| ||||  || || |||||||| |||||||||| |||| ||||||||||||| |||||||    
T  1375628 gttgtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 20148848 - 20148762
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||||||| | ||| ||||  ||  | |||||||| || ||||||| ||||||||||| ||||||||||||    
T  20148848 tggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 30912575 - 30912660
Alignment:
Q  5 ggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||||| |||||||| |  || |||| |||    |||||||| ||||||| || ||||||||||||||||||||||||    
T  30912575 ggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 31384752 - 31384663
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| | | | |||| ||| || ||||||||||  |||| || |||||||||||||||||| | ||||||    
T  31384752 tggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttcct 31384663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 2547084 - 2546995
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||| ||| | ||| |||| |||  | |||||||| | |||||  | ||||| |||||||||||||||||||||    
T  2547084 tggttgtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 2546995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10678161 - 10678198
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaat 38  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  10678161 gtatggttgtgagatgaatttaccaaaatgtccttaat 10678198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 2165975 - 2166063
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||| ||||||||| |||||||| | ||  |||| ||| || | |||||| ||||||| || |||| ||||||||||||| |||||||    
T  2165975 tggttatgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 8e-37; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43114648 - 43114554
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43114648 gtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 43114554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16804059 - 16803966
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    |||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16804059 gtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 16803966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16843341 - 16843248
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    |||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16843341 gtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 16843248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11825663 - 11825752
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  11825663 gtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41281983 - 41282072
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||| |||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  41281983 gtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18491796 - 18491704
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||| |||||||| ||| ||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  18491796 gtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 18491704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12415469 - 12415560
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| ||||||||||| ||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||    
T  12415469 gtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12427529 - 12427620
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| ||||||||||| ||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||    
T  12427529 gtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 966843 - 966936
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||| |||||||||||| ||||||||  || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  966843 gtatgtttgtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 966936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4299429 - 4299518
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| |  |||||||||||||||||||||||||||||||||| |||||||||    
T  4299429 gtatgattgtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34895750 - 34895846
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctttcc 97  Q
    ||||| |||||||||||| |||||||  ||||| |||||||| || ||||||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  34895750 gtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcctttcc 34895846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 6518484 - 6518566
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||||| ||||||||||||| |||||||||||||||||||    
T  6518484 ttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 1750502 - 1750414
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||| ||| | ||| |||| |||||| |||||||| ||||||| || ||||||||||||||||||||||||||    
T  1750502 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 12302265 - 12302356
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||| ||| | ||| |||| |||||| |||||||| |||||||  | |||||||||||||||||||||||||||||    
T  12302265 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttccttt 12302356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 14285758 - 14285675
Alignment:
Q  10 tgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||| |||||||| | || |||||  ||||| |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  14285758 tgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttcct 14285675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 19047245 - 19047158
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| |  |||| || |||||||||||||||||||||||||    
T  19047245 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 34817788 - 34817875
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| |||||||| ||| | || ||||| || ||||||||  ||||| ||| |||||||||||||||||||||||||    
T  34817788 tggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 30838720 - 30838631
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || ||||||||| | ||||  | |||||||||||||||||||||||||||    
T  30838720 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcct 30838631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 4764738 - 4764829
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | |   |||| ||| || |||||||||||||||| || |||| |||||| |||||||||||||||||    
T  4764738 tggttgtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttccttt 4764829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 43490413 - 43490499
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||| ||||||||| |||||||| | ||| |||| |||||  |||||||| || |||| || ||||||||||||||||||||||||    
T  43490413 tggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 16096835 - 16096747
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||| || | |||||| | ||| |||| ||| || |||| ||| ||||||| || ||||||||||||||||||||||||||    
T  16096835 tggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 43335777 - 43335865
Alignment:
Q  6 gttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||| |||||||| | ||| |||| ||| |||||||||||  |||||| || |||| | ||||||| |||||||||||||    
T  43335777 gttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcctt 43335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4451959 - 4452026
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgatta 68  Q
    |||||||||||||||||| |||||||| | ||| ||||||||| | ||||||||| | ||||||||||    
T  4451959 gtatggttgtgagatgaatttaccaaaatatccctaatgcatatggtgtacaataagatgtatgatta 4452026  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 8896598 - 8896681
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||| |||||||| | | | || || ||||| |||||||| |  ||| ||| ||||||||||||||||||||||||    
T  8896598 ttgtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 42026855 - 42026766
Alignment:
Q  6 gttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaa--gggtgttcatgtaacattttcct 93  Q
    ||||||||||||| || ||||| | ||| ||||||   ||||||||||| |  ||||||| ||||  |||||||||||||||||||||||    
T  42026855 gttgtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcct 42026766  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 7070459 - 7070418
Alignment:
Q  49 tacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||| || ||||||| ||||||||||||||||||||||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 4452026 - 4452066
Alignment:
Q  53 atagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||| ||||| |||||||||| ||||||||||||||||||    
T  4452026 ataggatgtataattaaagggtattcatgtaacattttcct 4452066  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 13780747 - 13780835
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| ||| |||| | ||| ||||| || || ||||||||  ||||| ||| ||||  ||||| ||||||||||||||    
T  13780747 tggttgtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 42849910 - 42849946
Alignment:
Q  56 gggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||| || ||||||||||||||||||||||||||    
T  42849910 gggtgtaggaataaagggtgttcatgtaacattttcc 42849946  T

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Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 44112768 - 44112675
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44112768 gtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 44112675  T

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Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38336009 - 38335918
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38336009 gtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

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Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 48119719 - 48119628
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  48119719 gtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

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Target: chr1; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38113204 - 38113296
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||| |||||||| |||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||    
T  38113204 gtatggttgtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcct 38113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41065244 - 41065152
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||| || || |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  41065244 gtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcct 41065152  T

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Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35003385 - 35003294
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | ||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||    
T  35003385 gtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 45427754 - 45427846
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |  |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  45427754 gtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcct 45427846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 46168474 - 46168383
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | |||||||||||| || ||||||||||| | ||||||||||||||||||||||||||||||||    
T  46168474 gtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

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Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45639741 - 45639834
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||| |||||||||||| |||||||| | ||||||||| || || ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  45639741 gtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcctt 45639834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45705916 - 45705824
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||| ||| |||| ||||| |||||||| |  ||||||||||  |||||||||||||||||||||| ||||||||||||    
T  45705916 gtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttcct 45705824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 5489864 - 5489773
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || |||||||||||||||||||||||||||||    
T  5489864 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccttt 5489773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 14427392 - 14427345
Alignment:
Q  47 tgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14427392 tgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 14427345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 43571098 - 43571186
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || ||||||||  |||||| || ||||||||||||||||||||||||||    
T  43571098 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26585553 - 26585460
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||| ||| |||||||| |||| ||| | |||||||||||| || |||||||||  ||||||||||||||  ||||||| |||||||||||||    
T  26585553 gtatgattgcgagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcctt 26585460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 23989535 - 23989627
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaa-gggtgttcatgtaacattttccttt 95  Q
    |||||||||||| || |||||||| | ||| |||| |||||| | |||||| | |||||||| |||| |||||||||||||||||||||||||    
T  23989535 tggttgtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttccttt 23989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 37814866 - 37814778
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||| ||||| |||||||| | |||||||| ||| || ||||||||  | ||||||| ||||||||||| ||||||||||||||    
T  37814866 tggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35000122 - 35000213
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| || ||| |||| ||||| |||| |||    | |||||||| ||||||||||||| |||||||||||||||||||||    
T  35000122 gtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 2497574 - 2497660
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||||||| | ||||||||  || || |||||||| |  ||||||| |||| |||||| ||||||||||||    
T  2497574 tggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 48498974 - 48499064
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| |||||||| | ||| |||| |||  | |||||||| | |||||  | ||||| ||||||||||||||||||||||    
T  48498974 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcctt 48499064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 50448272 - 50448360
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||| ||||||| |||| ||| | ||| |||| |||| | |||||||| | |||||  | ||||| ||||||||||||||||||||    
T  50448272 tggttgtaagatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 50448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9434215 - 9434121
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||||||||||||||| ||||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9434215 gtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttccttt 9434121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10457901 - 10457994
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| || |||||||| | |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10457901 gtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcctt 10457994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4190274 - 4190368
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||||||||||||||||| |||||||| | ||  |||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4190274 gtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 4190368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 25996358 - 25996267
Alignment:
Q  2 tatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||| |||||||| ||||||||||  || || ||||||||| | |||||||||||||||||||||||||||||||||||    
T  25996358 tatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttcct 25996267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51757684 - 51757593
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||  | ||||||||||||||||||||||||||||||| |||||| |||||||    
T  51757684 gtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34791920 - 34791829
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||  ||| ||||| ||||||||  | | ||||||| ||||||||||||||||||||||||||||||||||||    
T  34791920 gtatggttgtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 52627986 - 52628079
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||| |||||||||||| |||||||| | | ||||||||||  | ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  52627986 gtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcctt 52628079  T

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Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 40480837 - 40480750
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| |||||||| | ||| |||| ||||||||||||||| |||  ||||| |||||||||||||||||||||||||    
T  40480837 tggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

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Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 54237184 - 54237091
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctttcc 97  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || ||||||||||||||||||||||||| |||||    
T  54237184 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcgtttcc 54237091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 24688414 - 24688505
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| | |||||  | |||||||||||||||||||||||||||||    
T  24688414 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttccttt 24688505  T

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Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 54246160 - 54246251
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||| ||| | ||  |||| |||||| |||||||| ||||||| || |||||||||||||||||||||||||||||    
T  54246160 tggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttccttt 54246251  T

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Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 53581870 - 53581956
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| ||| |||| | ||| |||| ||||||||||||||| | |||||||| ||||| ||||||||||||||||||    
T  53581870 tggttgtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 25413769 - 25413680
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||| ||| | ||| |||| |||| | |||||||| ||||||| || |||||||||||||||||||||||||||    
T  25413769 tggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 25413680  T

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Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 36150218 - 36150130
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| | || |||||| |||| ||| |||||||||| |||||||| |||||||||||||||||    
T  36150218 tggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

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Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 42100776 - 42100688
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || ||||||||  |||||| || ||||||||||||||||||||||||||    
T  42100776 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

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Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 45126940 - 45127028
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || |||||||| || ||||||| ||||||||||| ||||||||||||||    
T  45126940 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 42394431 - 42394518
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| |  |||| || |||||||||||||||||||||||||    
T  42394431 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

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Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 46941141 - 46941050
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || ||||||||  | |||| || |||||||||||||||||||||||||||||    
T  46941141 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttccttt 46941050  T

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Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 40808953 - 40808863
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || |||||||| ||||||| || |||| |||||| ||||||||||||||||    
T  40808953 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcctt 40808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27748654 - 27748565
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||| ||||||||||||| |||||||| | ||| |||| |||| | |||| |||  ||||||||| |||| |||||||||||||||||||    
T  27748654 gtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 53273693 - 53273786
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    |||||||||||||||||| |||||||| | ||| |||| ||| |||||||||||  ||| || || |||| | ||||||| |||||||||||||    
T  53273693 gtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcctt 53273786  T

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Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 47191038 - 47191127
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| ||| |||| | ||  |||| ||| || ||||||||  |||||| || ||||||||||||||||||||||||||||    
T  47191038 tggttgtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 47191127  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 29558249 - 29558337
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||||||||||| |||||||  | | | ||||  ||||| ||||||||  | ||||||| |||||||||||||| ||||||| ||||||    
T  29558249 ttgtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacattgtccttt 29558337  T

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Target: scaffold0003 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45728 - 45817
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45728 gtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

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Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 40237009 - 40236916
Alignment:
Q  2 tatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40237009 tatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttccttt 40236916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31408642 - 31408732
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    |||||||||||| ||||| |||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31408642 gtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31513378 - 31513287
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | |||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||||    
T  31513378 gtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27535240 - 27535334
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||| |||||||||||||||||||||| |||| ||||  ||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27535240 gtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttccttt 27535334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 24001024 - 24001112
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || ||||||||||||||||||||||||||    
T  24001024 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 42538443 - 42538531
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || ||||||||||||||||||||||||||    
T  42538443 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33384962 - 33384867
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaataggg-tgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||| |||||||||||| |||||||| ||||| |||||||| |  | |||||||||| |||||||||||| | ||||||||||||||||||||||    
T  33384962 gtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttccttt 33384867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 43317528 - 43317442
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||| ||| |||| | ||| ||| ||||||||||||||||  ||||||||| |||| ||||||||||||||||||||||    
T  43317528 ttgtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcct 43317442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 5194246 - 5194332
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||| ||| |||| | |||||||  |||||| ||||||||  ||||||||| |||| ||||||||||||||||||||||    
T  5194246 ttgtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcct 5194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 10573837 - 10573751
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||||||| | | | |||| ||| || ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  10573837 tggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 24280611 - 24280697
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||| |||||||| | |   || ||||| ||||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  24280611 ttgtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcct 24280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4638208 - 4638297
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||| |||||||| | ||| ||||  || || |||||||| | |||||||| |||| |||||||||||||||||||    
T  4638208 gtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 9216389 - 9216301
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| | ||  |||||||| || ||||||||||| | || || |||||||||||||||||||||||||||    
T  9216389 tggttgtgagatgaacttaccaaaatatctctaatgcatggg-tgtacaataggatataggaataaagggtgttcatgtaacattttcct 9216301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 26898414 - 26898499
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattt 89  Q
    ||||||| ||||||| |||||||| | ||| |||| ||| | ||||||||| |||||||||| |||| ||||||||||||||||||    
T  26898414 tggttgtaagatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 5810936 - 5811024
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| ||| |||| | ||| ||||  ||||| |||||||| ||||||| || ||||||||| ||||||||||||||||    
T  5810936 tggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 41861764 - 41861672
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtc-ct-taatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    |||||||||||| || |||||||| | || || |||| |||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  41861764 tggttgtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcctt 41861672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 35069809 - 35069720
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| | ||| |||| |||  | ||||||||  |||||| || ||||| |||||||||||||||||||||    
T  35069809 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcct 35069720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 5015483 - 5015392
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| |||  | |||||||| | |||||  | ||||| |||||||||||||||||||||||    
T  5015483 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttccttt 5015392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 43343636 - 43343722
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| ||| |||| | ||| |||| ||| || ||||||||||||||||  | |||| | |||||||||||||||||    
T  43343636 tggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 44326266 - 44326180
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||||||| | ||| ||||  ||  | |||||||| || ||||||| ||||||||||| ||||||||||||    
T  44326266 tggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 44416946 - 44417032
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| ||| |||| | ||| |||| ||| || ||||||||||||||||  | |||| | |||||||||||||||||    
T  44416946 tggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 39998453 - 39998408
Alignment:
Q  47 tgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||    
T  39998453 tgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 42972940 - 42972852
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| |||  | |||||||| | ||||| || |||||| |||||| ||||||||||||    
T  42972940 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 27393272 - 27393344
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgt 76  Q
    ||||||||||||||| |||| ||| | ||| |||| |||||  ||||||||||| |||| || ||||||||||    
T  27393272 tggttgtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27441633 - 27441544
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27441633 gtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33242494 - 33242401
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||| |||||||||||| |||||||| |||||||||| ||| || ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33242494 gtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcctt 33242401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33254004 - 33253913
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||| |||||||||||| |||||||  ||||| |||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||    
T  33254004 gtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 9698345 - 9698434
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || |||||||||||||||||||||||||||    
T  9698345 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 9698434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3213491 - 3213397
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||||||||||| ||||| |||||||| | |||||||| ||| || ||||||||  | ||||||| ||||||||||| |||||||||||||||||    
T  3213491 gtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttccttt 3213397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 7273350 - 7273438
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||||||||||| |||||||| | ||  |||| ||| || ||||||||| |||||| || |||||||||||||||||||||||||||||    
T  7273350 ttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttccttt 7273438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 13743233 - 13743321
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || |||||||| || ||||||| |||| |||||||||||||||||||||    
T  13743233 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 13748733 - 13748821
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || |||||||| || ||||||| |||| |||||||||||||||||||||    
T  13748733 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 7292835 - 7292744
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||| |||  ||||||||| |||| ||||||| ||||||||||||||||    
T  7292835 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttccttt 7292744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 7367637 - 7367546
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| ||| |||||||||||  ||||||||| |||| | ||||||| ||||||||||||||    
T  7367637 tggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttccttt 7367546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 26670021 - 26670112
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| |||  | ||||||||  |||||| || |||||||||||||||||||||||||||||    
T  26670021 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttt 26670112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30014434 - 30014343
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||| | | | |||| ||| ||||||| ||| || |||| || ||||||||||||||||||||||||||    
T  30014434 gtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 24203999 - 24204085
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| |||||||| | ||| |||| ||| |  |||||||||||||||| || |||| |||||||||||||||||||    
T  24203999 tggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 26466887 - 26466796
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| |  || |||| ||| |  |||||||| ||||||| || ||||||||||| |||||||||||||||||    
T  26466887 tggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttccttt 26466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 21280017 - 21279928
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| | ||| |||| ||| |||||| |||| |  ||||  | |||||||||||||||||||||||||||    
T  21280017 tggttgtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcct 21279928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 31109268 - 31109323
Alignment:
Q  38 tgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||| || |||| ||| || |||||||||||||||||||||||||||||||||||    
T  31109268 tgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcct 31109323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 21293689 - 21293778
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||| ||||| |||||||| | |||||||| ||| || |||||| |    ||||||| ||||||||||| |||||||||||||||    
T  21293689 tggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcct 21293778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17208165 - 17208073
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||| |||||||| |||||||||||||| || |||||||||  |||||||||||||||||||||| |||||||||||||    
T  17208165 gtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcct 17208073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32473403 - 32473494
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||| | ||| ||||||||  | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  32473403 gtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30622728 - 30622821
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| || |||||||| | |||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  30622728 gtatggttgtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttccttt 30622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 2614661 - 2614749
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| || |||| || ||||||||||||||||||||||||||    
T  2614661 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 41334675 - 41334763
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||| |||  ||||||||| ||||||||||||||||||||||||||    
T  41334675 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 7617221 - 7617130
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| ||| || |||| ||| | |||||||| |||||||||||||||||||||||||||||    
T  7617221 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttccttt 7617130  T

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Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 18034070 - 18033980
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| |||| ||| | ||| |||| |||||| |||||||| | ||||| || ||||||||||||||||||||||||||||    
T  18034070 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcctt 18033980  T

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Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 5257083 - 5256992
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    |||||||||||||||||||||||| | ||| |||| ||| || |||||||| || ||||||| |||| |||||| |||||||||||| ||||    
T  5257083 tggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttcttt 5256992  T

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Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 22512393 - 22512305
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||| | ||| |||| ||| |  |||||||| | ||||| || ||||||||||||||||||||||||||    
T  22512393 tggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

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Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 38470664 - 38470577
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    |||||| ||||| |||||||| | |||||||| ||| || |||||||| |  ||||||| ||||||||||| ||||||||||||||||    
T  38470664 ttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcctt 38470577  T

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Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 33855071 - 33855143
Alignment:
Q  20 ttaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||| ||| | |||| ||| || |||||||| ||||||| || ||||||||||||||||||||||||||    
T  33855071 ttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

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Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 33801557 - 33801467
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| |||| ||| | ||| |||| ||| |  |||||||| |||||||  | |||||| |||||||||||||||||||||    
T  33801557 tggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcctt 33801467  T

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Target: scaffold0100 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35465 - 35556
Alignment:
Q  1 gtatggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||| |||||||  ||||| |||||||| || ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  35465 gtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

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Target: scaffold0187 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 14200 - 14289
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||| ||| | ||| |||| ||||||||||||||| |||||||  | |||||||||||||||||||||||||||    
T  14200 tggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 14289  T

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Target: scaffold0187; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 24528 - 24617
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||| ||| | ||| |||| ||||||||||||||| |||||||  | |||||||||||||||||||||||||||    
T  24528 tggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 24617  T

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Target: scaffold0119 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 773 - 682
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttt 95  Q
    ||||||||||||||| |||||||| | ||| |||| |||  | ||||||||  |||||| || |||||||||||||||||||||||||||||    
T  773 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttt 682  T

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Target: scaffold0038 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 112743 - 112656
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| |||||||| | ||| |||| |||||| |||||||| |  |||| || |||||||||||||||||||||||||    
T  112743 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

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Target: scaffold0385 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 11339 - 11249
Alignment:
Q  4 tggttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 94  Q
    ||||||||||||||| |||||||| | ||| ||||  || || |||||||| |||||||||| ||||| |||||||||| |||||||||||    
T  11339 tggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcctt 11249  T

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Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 23436 - 23521
Alignment:
Q  7 ttgtgagatgaaattaccaaactgtccttaatgcataggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 92  Q
    |||| ||||||| |||||||| | ||  |||| ||| ||||||||||| | ||||| || |||||||||||||| |||||||||||    
T  23436 ttgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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