View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17168_high_58 (Length: 310)
Name: NF17168_high_58
Description: NF17168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17168_high_58 |
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Alignment Details
Target: chr3 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 11 - 292
Target Start/End: Original strand, 33288686 - 33288967
Alignment:
| Q |
11 |
aagaatatgagttgaagaatatgagaaagtttcatacttcgataaaaatgagcaataatttgaattatatagagttttggaaacaaggtgagtgagcgct |
110 |
Q |
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| T |
33288686 |
aagaatatgagttgaagaatatgagaaagtttcatacttcgataaaaatgagcaataatttgaattatatagagttttggaaacaaggtgagtgagcact |
33288785 |
T |
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| Q |
111 |
taaaaattacgcttttaactaagtgaatcaattcaccataaatatgaatctattcgcaaaccccaatatagtgaattgattcacacgtgcatagtgaact |
210 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33288786 |
taaaaattacgtttttaactaagtgaatcaattcaccataaatatgaatctattcgcaaaccccaatatagtgaattgattcacacgtgcatagtgaact |
33288885 |
T |
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| Q |
211 |
gattcatattcacataattatgaattgattcaatacgagcaaagtttatcaagctaattttgaaaacgagatccaccaattt |
292 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
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| T |
33288886 |
gattcatattcatataattatgaattgattcaatacgagcaaagtttatcaagctaattttgaaaacaagatccatcaattt |
33288967 |
T |
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