View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17168_low_20 (Length: 489)
Name: NF17168_low_20
Description: NF17168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17168_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 443; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 17 - 475
Target Start/End: Original strand, 1443316 - 1443774
Alignment:
| Q |
17 |
tccatagaactagcgttacttaattcattggttttgaaatcttgagctgttacgttagctggatttttgcaaggtagaccattgatgaatacggtttgtt |
116 |
Q |
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| T |
1443316 |
tccatagaactagcgttacttaattcattggttttgaaatcttgagctgttacattagctggatttttgcaaggtagaccattgatgaatatggtttgtt |
1443415 |
T |
|
| Q |
117 |
tatttggtgaaattgatggacatgtgtcttgtaggttgtcacaatctgctaatgaaacttgggttttggttaagagattaaaaaataacacaaagaaaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
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| T |
1443416 |
tatttggtgaaattgatggacatgtgtcttgtaggttgtcacaatctgctaatgaaacttggattttggttaagagattaaaaaagaacacaaagaaaat |
1443515 |
T |
|
| Q |
217 |
gttgtaaacaaaggatttcatcttgaattttctctactgggtgagtatattttcttgcaccttattatgatggatttgaataaattatccacttcaattc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1443516 |
gttgtaaacaaaggatttcatcttgaattttctctactgggtgagtatattttcttgcaccttattatgatggatttgaataaattatccacttcaattc |
1443615 |
T |
|
| Q |
317 |
atatcatatatatagtatataagcgttgtacacaataaagttcttgatgtgagactttgctaatgtggattgcaagtaatgatacatagtcttggagttc |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1443616 |
atatcatatatatagtatataagcgttgtacacaataaagttcttgatgtgagactttgctaatgtggattgcaagtaatgatacatagtcttggagttc |
1443715 |
T |
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| Q |
417 |
aattcttgatttgaagtataatgtaagaagtgtatgcttgaaacaaaggaaacattgat |
475 |
Q |
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| T |
1443716 |
aattcttgatttgaagtataatgtaagaagtgtatgcttgaaacaaaggaaacattgat |
1443774 |
T |
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