View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17168_low_69 (Length: 268)
Name: NF17168_low_69
Description: NF17168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17168_low_69 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 26340655 - 26340887
Alignment:
| Q |
18 |
gaaaagaaaaaattggaagtctcttcaagtcaaggaaacataatggtgtctccttatgacttgaacaactacgacaatccaggtaacataataacttaag |
117 |
Q |
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| T |
26340655 |
gaaaagaaggaattggaagtctcttcaagtcaaggaaacaaaatagtgtcttcttaagacttgaacaacaatggcaatccaggaaacataataacttaag |
26340754 |
T |
|
| Q |
118 |
ttcaacttcgaggcgaaaactaggatgaatcggctcgtgccatgaaaaatttgttatgtgcgcagagaaaatggggattaatagaaggaagcatcccaaa |
217 |
Q |
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|||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |
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| T |
26340755 |
ttcaacttcgagacgaaaactacgatgaatcggctcgtgccatgaaaaatttgttacgtgcgcagagagaatggggattaatagaaggaatcatcccaaa |
26340854 |
T |
|
| Q |
218 |
acctgcagaaaactcacatgacatggaatattg |
250 |
Q |
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|||||||||||||||||||||||||||| |||| |
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| T |
26340855 |
acctgcagaaaactcacatgacatggaagattg |
26340887 |
T |
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