View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1716_low_7 (Length: 395)

Name: NF1716_low_7
Description: NF1716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1716_low_7
NF1716_low_7
[»] chr2 (39 HSPs)
chr2 (146-259)||(8875671-8875784)
chr2 (148-236)||(39241172-39241260)
chr2 (146-259)||(42519712-42519825)
chr2 (148-259)||(12160902-12161013)
chr2 (148-259)||(30523609-30523720)
chr2 (149-237)||(36936083-36936171)
chr2 (148-259)||(1876021-1876132)
chr2 (148-234)||(11018045-11018131)
chr2 (148-259)||(14958120-14958231)
chr2 (148-259)||(16496604-16496715)
chr2 (149-259)||(43568364-43568474)
chr2 (151-237)||(5774096-5774182)
chr2 (148-259)||(34245246-34245357)
chr2 (148-259)||(45376909-45377020)
chr2 (152-259)||(38324242-38324349)
chr2 (148-259)||(42097900-42098011)
chr2 (147-237)||(43496161-43496251)
chr2 (152-237)||(6432174-6432259)
chr2 (148-233)||(10361393-10361478)
chr2 (146-259)||(35422041-35422154)
chr2 (175-259)||(7454559-7454643)
chr2 (148-237)||(3147447-3147536)
chr2 (148-203)||(8341199-8341254)
chr2 (148-203)||(26340078-26340133)
chr2 (149-203)||(18109759-18109813)
chr2 (146-203)||(38928534-38928591)
chr2 (148-203)||(40862248-40862302)
chr2 (148-201)||(24520264-24520317)
chr2 (151-203)||(32482289-32482341)
chr2 (148-203)||(7183326-7183381)
chr2 (148-203)||(10247427-10247482)
chr2 (148-203)||(33178961-33179016)
chr2 (149-201)||(39532063-39532115)
chr2 (146-197)||(6322190-6322241)
chr2 (148-203)||(14452300-14452355)
chr2 (148-203)||(36600937-36600992)
chr2 (148-201)||(37240949-37241002)
chr2 (146-203)||(38928608-38928665)
chr2 (165-229)||(28014482-28014546)
[»] chr1 (50 HSPs)
chr1 (148-236)||(1190154-1190242)
chr1 (146-259)||(11823582-11823695)
chr1 (148-259)||(39325611-39325722)
chr1 (148-237)||(27747607-27747696)
chr1 (148-237)||(30358074-30358163)
chr1 (148-237)||(50586189-50586278)
chr1 (148-236)||(45900169-45900257)
chr1 (152-259)||(38815537-38815644)
chr1 (148-237)||(31657110-31657199)
chr1 (146-259)||(12014640-12014753)
chr1 (148-234)||(36739553-36739639)
chr1 (148-237)||(2459656-2459745)
chr1 (148-237)||(28955565-28955654)
chr1 (164-237)||(46315698-46315771)
chr1 (148-236)||(47326595-47326683)
chr1 (150-237)||(38624070-38624157)
chr1 (148-259)||(28314842-28314953)
chr1 (148-234)||(41865287-41865373)
chr1 (146-237)||(38058747-38058838)
chr1 (146-236)||(25365758-25365848)
chr1 (148-237)||(11332842-11332931)
chr1 (148-237)||(11490863-11490952)
chr1 (148-237)||(44277975-44278064)
chr1 (146-237)||(33076603-33076693)
chr1 (148-237)||(28343690-28343778)
chr1 (148-203)||(3796008-3796063)
chr1 (148-203)||(5698126-5698181)
chr1 (148-203)||(14390422-14390477)
chr1 (148-203)||(31656369-31656424)
chr1 (151-237)||(46742459-46742545)
chr1 (150-203)||(42628262-42628315)
chr1 (148-203)||(5698508-5698563)
chr1 (148-207)||(11756912-11756971)
chr1 (148-199)||(30899470-30899521)
chr1 (146-203)||(4640137-4640194)
chr1 (148-201)||(35179820-35179873)
chr1 (148-203)||(9223840-9223895)
chr1 (150-237)||(9423065-9423152)
chr1 (167-236)||(2937356-2937425)
chr1 (146-203)||(44502559-44502616)
chr1 (150-201)||(34086201-34086252)
chr1 (146-197)||(42159610-42159661)
chr1 (148-203)||(42330195-42330250)
chr1 (148-203)||(44109976-44110031)
chr1 (152-203)||(44299988-44300039)
chr1 (150-203)||(4361104-4361157)
chr1 (148-201)||(23259085-23259138)
chr1 (148-201)||(27667675-27667728)
chr1 (148-200)||(31496610-31496662)
chr1 (159-203)||(39325561-39325605)
[»] chr5 (47 HSPs)
chr5 (148-259)||(6789602-6789713)
chr5 (146-237)||(23590637-23590728)
chr5 (148-259)||(15498645-15498756)
chr5 (148-259)||(24171365-24171476)
chr5 (148-259)||(29525309-29525420)
chr5 (148-259)||(37530733-37530844)
chr5 (148-259)||(41734257-41734368)
chr5 (148-259)||(42709311-42709422)
chr5 (150-259)||(16218296-16218405)
chr5 (148-259)||(12280781-12280892)
chr5 (148-259)||(36761062-36761173)
chr5 (148-237)||(27813011-27813100)
chr5 (148-237)||(34589936-34590025)
chr5 (146-237)||(76412-76503)
chr5 (152-259)||(12953820-12953927)
chr5 (148-259)||(13359469-13359580)
chr5 (148-232)||(42422807-42422891)
chr5 (148-234)||(5050115-5050201)
chr5 (152-259)||(12939870-12939977)
chr5 (148-237)||(7615012-7615101)
chr5 (148-237)||(10815063-10815152)
chr5 (19-81)||(23099347-23099409)
chr5 (146-236)||(25881505-25881595)
chr5 (148-237)||(11784203-11784292)
chr5 (148-237)||(17645306-17645395)
chr5 (146-237)||(35766557-35766648)
chr5 (148-237)||(7157508-7157597)
chr5 (150-237)||(35638766-35638853)
chr5 (150-237)||(3703454-3703541)
chr5 (175-236)||(17540288-17540349)
chr5 (148-201)||(13018994-13019047)
chr5 (148-203)||(1923947-1924002)
chr5 (146-201)||(11575620-11575675)
chr5 (146-203)||(3033391-3033448)
chr5 (148-200)||(3078588-3078640)
chr5 (146-217)||(36944270-36944341)
chr5 (146-228)||(36959464-36959546)
chr5 (148-229)||(2890992-2891073)
chr5 (148-203)||(4559524-4559579)
chr5 (146-236)||(5102714-5102804)
chr5 (146-203)||(20017350-20017407)
chr5 (146-203)||(20768912-20768969)
chr5 (104-145)||(23099320-23099361)
chr5 (148-203)||(8520497-8520552)
chr5 (148-203)||(8520567-8520622)
chr5 (148-180)||(7948485-7948517)
chr5 (148-180)||(41356241-41356273)
[»] chr4 (59 HSPs)
chr4 (148-237)||(6238188-6238277)
chr4 (146-237)||(39840205-39840296)
chr4 (148-259)||(19801851-19801962)
chr4 (148-237)||(33984088-33984177)
chr4 (148-237)||(53284007-53284096)
chr4 (146-259)||(20356689-20356803)
chr4 (149-259)||(37114422-37114532)
chr4 (148-237)||(43374595-43374684)
chr4 (146-237)||(2943662-2943752)
chr4 (148-259)||(49335179-49335290)
chr4 (148-237)||(44448447-44448536)
chr4 (148-237)||(54683597-54683686)
chr4 (148-235)||(55001756-55001843)
chr4 (148-236)||(37498203-37498291)
chr4 (161-237)||(47633854-47633930)
chr4 (148-259)||(19800925-19801037)
chr4 (148-259)||(45561304-45561414)
chr4 (148-259)||(25686986-25687097)
chr4 (148-237)||(28778556-28778645)
chr4 (148-237)||(44525948-44526037)
chr4 (146-233)||(24152674-24152761)
chr4 (146-237)||(30653301-30653392)
chr4 (148-259)||(36181358-36181469)
chr4 (148-236)||(6287837-6287925)
chr4 (146-233)||(40674745-40674833)
chr4 (148-236)||(53431630-53431718)
chr4 (148-203)||(202290-202345)
chr4 (147-203)||(51924025-51924081)
chr4 (148-203)||(19912673-19912728)
chr4 (148-203)||(30411296-30411351)
chr4 (148-203)||(30653499-30653553)
chr4 (152-217)||(55496067-55496132)
chr4 (148-203)||(7113559-7113614)
chr4 (148-203)||(45549653-45549708)
chr4 (148-203)||(50792460-50792515)
chr4 (148-198)||(318443-318493)
chr4 (150-203)||(50790826-50790879)
chr4 (148-203)||(14269867-14269922)
chr4 (148-203)||(26923583-26923638)
chr4 (146-237)||(51941101-51941192)
chr4 (148-203)||(55610663-55610718)
chr4 (148-190)||(7141179-7141221)
chr4 (150-228)||(31220179-31220257)
chr4 (175-237)||(32012574-32012636)
chr4 (150-203)||(1771884-1771937)
chr4 (148-201)||(2390316-2390369)
chr4 (146-203)||(28459610-28459667)
chr4 (154-203)||(36824450-36824499)
chr4 (154-203)||(36824619-36824668)
chr4 (148-201)||(43590534-43590587)
chr4 (148-201)||(48369015-48369068)
chr4 (146-203)||(48953028-48953085)
chr4 (151-203)||(49648864-49648916)
chr4 (148-203)||(31997832-31997887)
chr4 (146-180)||(30996709-30996743)
chr4 (150-200)||(55660548-55660598)
chr4 (150-203)||(49646027-49646080)
chr4 (148-200)||(19871020-19871072)
chr4 (146-210)||(49491543-49491607)
[»] chr8 (47 HSPs)
chr8 (148-259)||(43800757-43800868)
chr8 (146-237)||(22215109-22215200)
chr8 (148-237)||(284818-284907)
chr8 (148-237)||(630970-631059)
chr8 (148-237)||(816782-816871)
chr8 (148-237)||(39733726-39733815)
chr8 (146-237)||(35160280-35160371)
chr8 (148-259)||(25100203-25100314)
chr8 (146-237)||(38746967-38747059)
chr8 (146-237)||(3512469-3512560)
chr8 (148-223)||(25099413-25099488)
chr8 (148-237)||(2773593-2773682)
chr8 (148-237)||(20697516-20697605)
chr8 (148-259)||(14911765-14911876)
chr8 (150-236)||(17121817-17121903)
chr8 (148-259)||(40529501-40529612)
chr8 (148-237)||(5574602-5574691)
chr8 (146-259)||(35057289-35057402)
chr8 (148-237)||(5838256-5838345)
chr8 (146-259)||(36859227-36859339)
chr8 (146-237)||(16785615-16785706)
chr8 (148-237)||(24804497-24804586)
chr8 (148-236)||(16786542-16786630)
chr8 (150-237)||(21266874-21266961)
chr8 (148-203)||(12208806-12208861)
chr8 (148-203)||(12453234-12453289)
chr8 (148-203)||(18146342-18146397)
chr8 (148-203)||(43150252-43150307)
chr8 (148-203)||(45069863-45069918)
chr8 (148-237)||(34903388-34903477)
chr8 (194-237)||(35398017-35398060)
chr8 (148-203)||(39104222-39104277)
chr8 (161-236)||(41355624-41355699)
chr8 (146-201)||(42353736-42353791)
chr8 (148-203)||(43873958-43874013)
chr8 (196-237)||(16785863-16785904)
chr8 (146-203)||(38760854-38760911)
chr8 (148-200)||(43129590-43129642)
chr8 (148-203)||(45237837-45237892)
chr8 (148-201)||(4477665-4477718)
chr8 (146-203)||(31642793-31642850)
chr8 (146-199)||(45237012-45237065)
chr8 (148-180)||(7303338-7303370)
chr8 (146-203)||(35253074-35253131)
chr8 (148-201)||(41206581-41206634)
chr8 (147-203)||(38364515-38364571)
chr8 (144-180)||(44338761-44338797)
[»] chr7 (59 HSPs)
chr7 (148-259)||(27826709-27826820)
chr7 (148-259)||(28494264-28494375)
chr7 (148-259)||(42329011-42329122)
chr7 (148-259)||(46672506-46672617)
chr7 (146-259)||(4060350-4060463)
chr7 (148-236)||(42265284-42265372)
chr7 (146-237)||(28958132-28958223)
chr7 (148-234)||(6243867-6243953)
chr7 (148-237)||(31031904-31031993)
chr7 (150-237)||(35647418-35647505)
chr7 (148-259)||(46536122-46536233)
chr7 (148-237)||(43156568-43156657)
chr7 (148-236)||(46350847-46350935)
chr7 (146-237)||(6476924-6477015)
chr7 (148-259)||(43337633-43337744)
chr7 (148-237)||(46615689-46615778)
chr7 (148-236)||(46534408-46534496)
chr7 (150-237)||(31226881-31226968)
chr7 (148-259)||(25696033-25696144)
chr7 (148-259)||(29994204-29994315)
chr7 (148-237)||(28235285-28235374)
chr7 (149-236)||(48935236-48935323)
chr7 (148-259)||(21920784-21920895)
chr7 (146-236)||(14792128-14792218)
chr7 (148-237)||(981337-981426)
chr7 (148-237)||(42997514-42997603)
chr7 (146-233)||(43158206-43158294)
chr7 (148-237)||(3370449-3370538)
chr7 (152-237)||(30523964-30524049)
chr7 (148-217)||(46349914-46349983)
chr7 (188-237)||(47479826-47479875)
chr7 (181-233)||(42328178-42328230)
chr7 (148-203)||(30582671-30582726)
chr7 (148-203)||(35670398-35670453)
chr7 (148-203)||(37658159-37658214)
chr7 (148-203)||(40061163-40061218)
chr7 (148-203)||(8932544-8932599)
chr7 (148-203)||(9806633-9806688)
chr7 (152-203)||(39870065-39870116)
chr7 (158-203)||(31619515-31619560)
chr7 (146-203)||(36121429-36121486)
chr7 (148-200)||(44818721-44818773)
chr7 (148-203)||(596156-596211)
chr7 (148-203)||(44570932-44570987)
chr7 (146-200)||(31436294-31436348)
chr7 (146-203)||(30999388-30999445)
chr7 (150-203)||(31030808-31030861)
chr7 (146-203)||(43544940-43544997)
chr7 (148-236)||(44103664-44103752)
chr7 (148-200)||(47252217-47252269)
chr7 (148-203)||(1602024-1602078)
chr7 (148-203)||(25751111-25751166)
chr7 (148-203)||(31969510-31969565)
chr7 (148-203)||(42328229-42328284)
chr7 (148-203)||(42329599-42329654)
chr7 (146-189)||(42825998-42826041)
chr7 (148-186)||(35747025-35747063)
chr7 (146-203)||(585934-585991)
chr7 (146-203)||(33982359-33982416)
[»] chr6 (21 HSPs)
chr6 (148-259)||(24119227-24119338)
chr6 (148-237)||(13756330-13756419)
chr6 (150-259)||(20992253-20992362)
chr6 (148-237)||(20645658-20645747)
chr6 (148-237)||(22707291-22707380)
chr6 (146-259)||(21860232-21860345)
chr6 (150-259)||(25023443-25023552)
chr6 (148-237)||(21778096-21778185)
chr6 (148-236)||(12130481-12130569)
chr6 (148-237)||(21459022-21459111)
chr6 (148-203)||(1789787-1789842)
chr6 (148-203)||(18368778-18368833)
chr6 (150-236)||(6834057-6834143)
chr6 (148-203)||(18801700-18801755)
chr6 (147-200)||(13866263-13866316)
chr6 (148-203)||(4976524-4976579)
chr6 (148-203)||(15508349-15508404)
chr6 (146-201)||(32562457-32562512)
chr6 (146-203)||(190921-190978)
chr6 (148-201)||(5090130-5090183)
chr6 (146-203)||(34574639-34574696)
[»] chr3 (61 HSPs)
chr3 (148-259)||(8321419-8321530)
chr3 (148-259)||(34435963-34436074)
chr3 (148-259)||(41991672-41991783)
chr3 (148-237)||(19274730-19274819)
chr3 (148-259)||(30317932-30318043)
chr3 (148-237)||(12055525-12055614)
chr3 (146-259)||(2557890-2558003)
chr3 (150-259)||(8879366-8879475)
chr3 (148-235)||(48050994-48051081)
chr3 (148-259)||(12764671-12764782)
chr3 (148-259)||(52184815-52184926)
chr3 (148-237)||(52959292-52959381)
chr3 (148-236)||(17666802-17666890)
chr3 (150-259)||(54463444-54463553)
chr3 (148-259)||(9558848-9558959)
chr3 (148-259)||(51062910-51063021)
chr3 (149-237)||(42528066-42528154)
chr3 (148-234)||(32999670-32999756)
chr3 (148-234)||(51980732-51980818)
chr3 (148-237)||(1361671-1361760)
chr3 (150-236)||(6124713-6124799)
chr3 (152-236)||(35405543-35405627)
chr3 (146-237)||(51760469-51760560)
chr3 (148-259)||(36237836-36237947)
chr3 (148-233)||(4070816-4070901)
chr3 (148-237)||(30743024-30743113)
chr3 (163-237)||(42292992-42293066)
chr3 (148-201)||(5505932-5505985)
chr3 (148-237)||(12122184-12122273)
chr3 (146-203)||(32111604-32111661)
chr3 (148-203)||(12122925-12122980)
chr3 (149-203)||(46114989-46115043)
chr3 (150-203)||(36660180-36660233)
chr3 (144-237)||(43968362-43968455)
chr3 (152-203)||(36806926-36806977)
chr3 (148-203)||(40374552-40374607)
chr3 (150-237)||(55226297-55226384)
chr3 (146-203)||(39129372-39129429)
chr3 (146-203)||(42167376-42167433)
chr3 (148-200)||(45355130-45355182)
chr3 (148-203)||(6586265-6586320)
chr3 (148-187)||(13353416-13353455)
chr3 (146-237)||(17666613-17666704)
chr3 (148-203)||(46668341-46668396)
chr3 (146-203)||(43860724-43860781)
chr3 (148-237)||(45356428-45356517)
chr3 (146-203)||(50935711-50935768)
chr3 (165-229)||(10809517-10809581)
chr3 (150-230)||(25999186-25999266)
chr3 (148-203)||(7041730-7041785)
chr3 (152-203)||(22978083-22978134)
chr3 (148-203)||(34785922-34785977)
chr3 (148-203)||(39129300-39129355)
chr3 (148-203)||(41888809-41888864)
chr3 (148-203)||(48747404-48747459)
chr3 (146-201)||(54598190-54598245)
chr3 (146-200)||(40980187-40980241)
chr3 (148-202)||(42877240-42877294)
chr3 (146-203)||(48071974-48072031)
chr3 (149-237)||(50198016-50198104)
chr3 (148-200)||(50938284-50938336)
[»] scaffold0076 (1 HSPs)
scaffold0076 (146-236)||(14202-14292)
[»] scaffold0060 (1 HSPs)
scaffold0060 (148-259)||(57837-57948)
[»] scaffold0330 (1 HSPs)
scaffold0330 (148-236)||(6991-7079)
[»] scaffold0007 (1 HSPs)
scaffold0007 (146-233)||(157629-157716)
[»] scaffold0115 (2 HSPs)
scaffold0115 (148-203)||(4149-4204)
scaffold0115 (148-203)||(11889-11944)
[»] scaffold1391 (1 HSPs)
scaffold1391 (150-236)||(1506-1592)
[»] scaffold0039 (1 HSPs)
scaffold0039 (148-200)||(76244-76296)


Alignment Details
Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 8875671 - 8875784
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  8875671 gttgtgtttggtaacacaaaaaagttagcttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttc 8875770  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  8875771 atgagcttatagcg 8875784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 39241260 - 39241172
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39241260 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 39241172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 42519712 - 42519825
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  42519712 gttgtgtttggtaacacaaaaaagctagcttatagcttgttgcattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttc 42519811  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  42519812 atgagcttatagcg 42519825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 12161013 - 12160902
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  12161013 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 12160914  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  12160913 gagcttatagcg 12160902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 30523609 - 30523720
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||    
T  30523609 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 30523708  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  30523709 gagcttatagcg 30523720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 36936171 - 36936083
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36936171 gtgtttggtaacaaaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 36936083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 1876132 - 1876021
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  1876132 tgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 1876033  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  1876032 gagcttatagcg 1876021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 11018131 - 11018045
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaac 234  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11018131 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaac 11018045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 14958120 - 14958231
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||| ||||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||       |||    
T  14958120 tgtgtttggtaatacaaagaagctaatttatagcttgttggattagtttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcat 14958219  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  14958220 gagcttatagcg 14958231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 16496715 - 16496604
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||       |||    
T  16496715 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataagctcgttagatgaaaacgtggcgtgtttggcaacaagcttttttcat 16496616  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  16496615 gagcttatagcg 16496604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 43568364 - 43568474
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatg 248  Q
    ||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       ||||    
T  43568364 gtgtttggtaacacaaaaaagttaacttatagcttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttatcatg 43568463  T
Q  249 agcttatagcg 259  Q
    |||||||||||    
T  43568464 agcttatagcg 43568474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 5774096 - 5774182
Alignment:
Q  151 gtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  5774096 gtttgataatacaaaaaagctagtttatagcttgttggattagcttataagcttgttagatgaaaacgtggcgtgtttggtaacaag 5774182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 34245246 - 34245357
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||       |||    
T  34245246 tgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggtttgtttggtaacaagcttttttcat 34245345  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  34245346 gagcttatagcg 34245357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 45376909 - 45377020
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||       |||    
T  45376909 tgtgtttggtaacacaaataagctagtttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaagcttttctcat 45377008  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  45377009 gagcttatagcg 45377020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 152 - 259
Target Start/End: Original strand, 38324242 - 38324349
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatgagc 251  Q
    |||||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||       |||||||    
T  38324242 tttggtaacataaaaaagctagcttatagcttgttgaattagcttataagctcgttagatgaaaacgtggcgtgtttgataacaagtttttttcatgagc 38324341  T
Q  252 ttatagcg 259  Q
    ||||||||    
T  38324342 ttatagcg 38324349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 42098011 - 42097900
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||  || ||||||||||||| |||||||||||||||       |||    
T  42098011 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttattggatgaaaacgtgatgtgtttggtaacaagcttttctcat 42097912  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  42097911 gagcttatagcg 42097900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 43496161 - 43496251
Alignment:
Q  147 ttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||| ||| ||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  43496161 ttgtgtttggtaacataaataagctagcttatagcttgttgcattagcttataagctcgttggatgaaaacgtgacgtgtttagtaacaag 43496251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 6432174 - 6432259
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| ||||||| ||||| ||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  6432174 tttggtaacacaaataagctagcttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaag 6432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 10361393 - 10361478
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaa 233  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| || ||||||||| ||| |||||||||||    
T  10361393 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagctcattggatgaaaacatgatgtgtttggtaa 10361478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 35422041 - 35422154
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    ||||||||| ||||||||||||||||||||||||  || |||||||||||||||| || ||| | ||||||||||| |||||||||||||||       |    
T  35422041 gttgtgtttagtaacacaaaaaagctagtttatagttttttggattagcttataaacttgttggttgaaaacgtgatgtgtttggtaacaagcttttctc 35422140  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  35422141 atgagcttatagcg 35422154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 7454559 - 7454643
Alignment:
Q  175 ttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatgagcttatagcg 259  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  7454559 ttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatagcg 7454643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 3147447 - 3147536
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| ||| ||| ||| |||||||||||| ||||||||||||||||  || |||||||| ||||||||||||||||||||    
T  3147447 tgtgtttggtaacataaataagttagcttataacttgttagattagcttataagcttcttggatgaaaatgtgacgtgtttggtaacaag 3147536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 8341254 - 8341199
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  8341254 tgtgtttggtaacacaaataagctagcttataacttgttggactagcttataagct 8341199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 26340133 - 26340078
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  26340133 tgtgtttggtaacacaaaaaagctaacttataacttgttggactagcttataagct 26340078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 18109813 - 18109759
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  18109813 gtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 18109759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 38928591 - 38928534
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  38928591 gttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagct 38928534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 40862302 - 40862248
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  40862302 tgtgtttggtaacacaaaaa-gctagtttatagcttgttggactagcttataagct 40862248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 24520317 - 24520264
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||| || ||||||| ||||| |||||||||||||||||||||    
T  24520317 tgtgtttggtaacacgaataagctagcttatagcttgttggattagcttataag 24520264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 32482341 - 32482289
Alignment:
Q  151 gtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||||||  ||| |||| |||||||||||||    
T  32482341 gtttggtaacacaaaaaagctagtttatagtttgctggactagcttataagct 32482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 7183381 - 7183326
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| |||||  |||||||| ||| |||||||||    
T  7183381 tgtgtttggtaacacaaaaaagctagcttatagtttgttggactagtttataagct 7183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 10247482 - 10247427
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||| ||| |||||  |||||||| |||||||||||||    
T  10247482 tgtgtttggtaacacaaaaaagttagcttatagtttgttggactagcttataagct 10247427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 33178961 - 33179016
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  33178961 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagct 33179016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 39532063 - 39532115
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||||||||  ||| ||||| ||||||||| |||||||||||    
T  39532063 gtgtttggtaacacaaaaaaattagcttatagcttgttggactagcttataag 39532115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 6322241 - 6322190
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagctta 197  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||| |||||||    
T  6322241 gttgtgtttggtaacacgaataagctagcttatagcttgttggactagctta 6322190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 14452300 - 14452355
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| ||  |||||| ||||| ||||||||| |||||||||||||    
T  14452300 tgtgtttggtaacacgaattagctagcttatagcttgttggactagcttataagct 14452355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 36600937 - 36600992
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||| |||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  36600937 tgtgtttgataacacgaataagctagcttatagcttgttggactagcttataagct 36600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 37240949 - 37241002
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||| ||||| ||||| ||||||| |||||||||||| || |||||||||||    
T  37240949 tgtgttcggtaatacaaataagctagcttataacttgttagactagcttataag 37241002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 38928665 - 38928608
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||  || ||||||| |||||  |||||||| |||||||||||||    
T  38928665 gttgtgtttggtaacatgaataagctagcttatagtttgttggactagcttataagct 38928608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 28014482 - 28014546
Alignment:
Q  165 aaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttg 229  Q
    ||||||||| ||||| ||| ||| ||||||||||||| | ||| ||| ||||| |||||||||||    
T  28014482 aaaagctagcttatagcttattgaattagcttataagtttgttggatcaaaacatgacgtgtttg 28014546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 1190242 - 1190154
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1190242 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaa 1190154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 11823582 - 11823695
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||       |    
T  11823582 gttgtgtttggtaacacaaaaaagctagtttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgttcggtaacaagtttttttc 11823681  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  11823682 atgagcttatagcg 11823695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 39325611 - 39325722
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  39325611 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 39325710  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  39325711 gagcttatagcg 39325722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 27747607 - 27747696
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27747607 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 27747696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 30358074 - 30358163
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30358074 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaag 30358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 50586278 - 50586189
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50586278 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 50586189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 45900169 - 45900257
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  45900169 tgtgtttggtaacacagaaaagctagtttatagcttgttggattagcttataagctcgttagaagaaaacgtgatgtgtttggtaacaa 45900257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 38815644 - 38815537
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatgagc 251  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||       |||||||    
T  38815644 tttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttggtaacaagcttttttcatgagc 38815545  T
Q  252 ttatagcg 259  Q
    ||||||||    
T  38815544 ttatagcg 38815537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 31657199 - 31657110
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||    
T  31657199 tgtgtttggtaacacaaaaaagctagtttataatttgttggattagcttataagctcgtcggatgaaaacgtgatgtgtttggcaacaag 31657110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 12014640 - 12014753
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||||||||       |    
T  12014640 gttgtgtttggtaacacaaaaaagttagcttataacttgttggattagtttataagctcgttagatgaaaacgtggtgtgtgtggtaacaagtttttttc 12014739  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  12014740 atgagcttatagcg 12014753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 36739553 - 36739639
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaac 234  Q
    |||||||||||| ||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36739553 tgtgtttggtaatacaaaaaagttagtttatagtttgttggattaacttataagctcgttagatgaaaacgtgacgtgtttggtaac 36739639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 2459745 - 2459656
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || ||||||||||||| |||||||||||||||    
T  2459745 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttattggatgaaaacgtgatgtgtttggtaacaag 2459656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 28955654 - 28955565
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| ||||||||||  ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28955654 tgtgtttggtaacataaaaaagctaacttatagcttgttagattagcttataagctcgttagatgaaaacgtgatgtgtttggtaacaag 28955565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 46315771 - 46315698
Alignment:
Q  164 aaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46315771 aaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 46315698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 47326683 - 47326595
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  47326683 tgtgtttggtaacccaaaaaagctagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaacaa 47326595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 38624070 - 38624157
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||| |||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38624070 tgtttggtagcacaaaaaagctaacttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 38624157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 28314953 - 28314842
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||       |||    
T  28314953 tgtgtttggtaacccaaaaaaactagtttataatttgttggattaacttataagctcattagataaaaacgtgatgtgtttggtaacaagcttttttcat 28314854  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  28314853 gagcttatagcg 28314842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 41865287 - 41865373
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaac 234  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  41865287 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaac 41865373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 38058747 - 38058838
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| || ||| | ||||||||||| |||||||||||||||    
T  38058747 gttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataaccttgttggttgaaaacgtgatgtgtttggtaacaag 38058838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 25365758 - 25365848
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||| ||| ||| ||| ||||| |||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  25365758 gttgtgtttggtaacataaataagttagcttatagcttgttagattaacttataagctcgttggatgaaaacgtgacatgtttggtaacaa 25365848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 11332842 - 11332931
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||  ||||||||  ||| |||||| ||||||||    
T  11332842 tgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataagctcgtgggatgaaaaattgatgtgtttagtaacaag 11332931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 11490863 - 11490952
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||  ||||||||  ||| |||||| ||||||||    
T  11490863 tgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataagctcgtgggatgaaaaattgatgtgtttagtaacaag 11490952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 44278064 - 44277975
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||| ||||||||| ||||||  ||||| ||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  44278064 tgtgtttgataacacaaataagctaacttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaag 44277975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 33076603 - 33076693
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||| ||| ||||||| |||||  ||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  33076603 gttgtgtttggtaacataaataagctagcttatagtttgttagattagct-ataagctcgttggatgaaaatgtgacgtgtttggtaacaag 33076693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 28343690 - 28343778
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||| |||||||||| ||||||||||||  |||||||| || |||||||| ||||| ||||||||||||| |||||||||||||||    
T  28343690 tgtgtttgctaacacaaaa-agctagtttatagtttgttggagtaacttataagttcgttggatgaaaacgtgatgtgtttggtaacaag 28343778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 3796063 - 3796008
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  3796063 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 3796008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 5698126 - 5698181
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  5698126 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 5698181  T

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Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 14390422 - 14390477
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  14390422 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 14390477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 31656369 - 31656424
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  31656369 tgtgtttggtaacacaaaaaagctagtttatagcttgttggactagcttacaagct 31656424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 46742459 - 46742545
Alignment:
Q  151 gtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||| |||| |||||  || ||||||||| ||||||||| ||| ||||||||| ||| | |||||||||||||    
T  46742459 gtttggtaacacaaaaaaactagcttatagtttcttggattagattataagcttgttggatgaaaacatgatgcgtttggtaacaag 46742545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 42628315 - 42628262
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  42628315 tgtttggtaatacaaaaaagctagtttatagcttgttggactagcttataagct 42628262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 5698508 - 5698563
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||    
T  5698508 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagct 5698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 11756971 - 11756912
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgtt 207  Q
    ||||||||||||||| || ||||||| |||| |||||||||| |||||||||||||||||    
T  11756971 tgtgtttggtaacacgaataagctagcttatgacttgttggactagcttataagctcgtt 11756912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 30899521 - 30899470
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttata 199  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  30899521 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttata 30899470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 4640194 - 4640137
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  4640194 gttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagct 4640137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 35179820 - 35179873
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||    
T  35179820 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataag 35179873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 9223840 - 9223895
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||  ||||| ||||||||| || ||||||||||    
T  9223840 tgtgtttggtaacacaaaaaagctaacttatagcttgttggactaacttataagct 9223895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 9423152 - 9423065
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||  || |||| |  ||||| ||||||| ||||||||||||||| ||| ||| |||| |||| |||||||||||||||    
T  9423152 tgtttggtaacagcaagaagccaacttatagcttgttgaattagcttataagcttgttggatcaaaatgtgatgtgtttggtaacaag 9423065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 2937356 - 2937425
Alignment:
Q  167 aagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||| ||||| ||||||| ||||||||||||| | ||| ||| |||| |||| ||||||||||||||    
T  2937356 aagctagcttatagcttgttgaattagcttataagtttgttggatcaaaatgtgatgtgtttggtaacaa 2937425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 44502559 - 44502616
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||| ||||||||||| ||||| ||| |||||||  ||||||||||    
T  44502559 gttgtgtttggtaacataaaaaagctagcttatagcttattggattgacttataagct 44502616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 34086201 - 34086252
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||||||| |||| |||||  |||| |||||||||||||||    
T  34086201 tgtttggtaacacaaaaaacctagcttatagtttgtcggattagcttataag 34086252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 42159610 - 42159661
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagctta 197  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||| |||||||    
T  42159610 gttgtgtttggtaacacgaataagctagcttatagcttgttggaatagctta 42159661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 42330195 - 42330250
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||| |||||||||||| |||  |||||  ||||||||||||||||||||||    
T  42330195 tgtgtttgctaacacaaaaaaactaacttatagtttgttggattagcttataagct 42330250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 44110031 - 44109976
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||| | ||||||||| ||||||| ||||| ||||||||| |||||||||||||    
T  44110031 tgtgttagataacacaaataagctagcttatagcttgttggactagcttataagct 44109976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 44300039 - 44299988
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  44300039 tttggtaacacgaataagctagcttatagcttgttggactagcttataagct 44299988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 4361157 - 4361104
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||| ||| |||||  || ||||| |||||||||||||    
T  4361157 tgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagct 4361104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 23259085 - 23259138
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||| || ||| ||| ||||| ||||||||| |||||||||||    
T  23259085 tgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataag 23259138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 27667675 - 27667728
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||||||| || ||||||||| ||| ||| | |||||||||||    
T  27667675 tgtgtttggtaacacaaaatagttagtttatagcttattgaactagcttataag 27667728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 31496610 - 31496662
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    |||||||||||||||| | ||||||| ||||| ||| ||||| ||||||||||    
T  31496610 tgtgtttggtaacacagataagctagcttatagcttcttggactagcttataa 31496662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 39325605 - 39325561
Alignment:
Q  159 acacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||    
T  39325605 acacaaaaaagctagcttatagcttgttgaactagcttataagct 39325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 6789713 - 6789602
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||    
T  6789713 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcat 6789614  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  6789613 gagcttatagcg 6789602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 23590637 - 23590728
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  23590637 gttgtgtttggtaacacaaaaaagatagtttataacttgttggattagcttataaactcgttagatgaaaacgtggcgtgtttggtaacaag 23590728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 15498645 - 15498756
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  15498645 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 15498744  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  15498745 gagcttatagcg 15498756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 24171365 - 24171476
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       |||    
T  24171365 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaatcgtgacgtgtttggtaacaagcttttttcat 24171464  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  24171465 gagcttatagcg 24171476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 29525420 - 29525309
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  29525420 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 29525321  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  29525320 gagcttatagcg 29525309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 37530844 - 37530733
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  37530844 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 37530745  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  37530744 gagcttatagcg 37530733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 41734368 - 41734257
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||    
T  41734368 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 41734269  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  41734268 gagcttatagcg 41734257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 42709311 - 42709422
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  42709311 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 42709410  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  42709411 gagcttatagcg 42709422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 16218405 - 16218296
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatga 249  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||||    
T  16218405 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatga 16218306  T
Q  250 gcttatagcg 259  Q
    ||||||||||    
T  16218305 gcttatagcg 16218296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 12280781 - 12280892
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||    
T  12280781 tgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 12280880  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  12280881 gagcttatagcg 12280892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 36761062 - 36761173
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||    
T  36761062 tgtgtttggtaacacaaaaaagctagcttataggttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 36761161  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  36761162 gagcttatagcg 36761173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 27813100 - 27813011
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27813100 tgtgtttggtaacacaaaaaagctagcttatagcttgttgaattagtttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 27813011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 34590025 - 34589936
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  34590025 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacatggcgtgtttggtaacaag 34589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 76412 - 76503
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  76412 gttgtgtttgataacacaaaaaagctagcttatagctttttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 76503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 12953927 - 12953820
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatgagc 251  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||       |||||||    
T  12953927 tttggtaacacaaaaaagctagcttataatttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttgataacaagcttttttcatgagc 12953828  T
Q  252 ttatagcg 259  Q
    ||||||||    
T  12953827 ttatagcg 12953820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 13359580 - 13359469
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||| |||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||    
T  13359580 tgtgtttgataacacaaaaaagctagcatatagcttgttggattagcttataagcttgttagatgaaaacgtgacgtgtttggtaacaagcttttttcat 13359481  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  13359480 gagcttatagcg 13359469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 42422807 - 42422891
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggta 232  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  42422807 tgtgtttggtaacacaaaaaagctagtttatagcttgttgaattaacttataagctcgttagatgaaaacgtggcgtgtttggta 42422891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 5050201 - 5050115
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaac 234  Q
    |||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5050201 tgtgtttggtaacataaataagctagcttatagcttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaac 5050115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 12939977 - 12939870
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatgagc 251  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||||||       |||||||    
T  12939977 tttggtaacacaaaaaagctagcttataatttgttggattagcttataagctcgttagatgaaaacctggcgtgtttgataacaagtttttttcatgagc 12939878  T
Q  252 ttatagcg 259  Q
    ||||||||    
T  12939877 ttatagcg 12939870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 7615101 - 7615012
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  7615101 tgtgtttggtaatacaaaaaagctaccttatagcttgttggattagcttataagctcgttagatgaaaacatggcgtgtttggtaacaag 7615012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 10815063 - 10815152
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  10815063 tgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagctcgttagatgaaaatatgacgtgtttagtaacaag 10815152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 23099409 - 23099347
Alignment:
Q  19 ttctggtgggcatgtcttggtagttcagccaatatgatagttgttattgggttcatgacagaa 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23099409 ttctggtgggcatgtcttggtagttcagccaatatgatagttgttattgggttcatgacagaa 23099347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 25881505 - 25881595
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||| ||| | ||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25881505 gttgtgtttggtaacataaataggctagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaa 25881595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 11784292 - 11784203
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  || |||| |||||||||||    
T  11784292 tgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaatatgtcgtggttggtaacaag 11784203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 17645306 - 17645395
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| ||| ||||||| ||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  17645306 tgtgtttggtaacataaataagctagcttatagcttgttagattagcttataagttcgttggatgaaaacgtgacgtgtttggtaacaag 17645395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 35766557 - 35766648
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||| ||| ||||||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  35766557 gttgtgtttgataatacaaaaaagctagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaag 35766648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 7157597 - 7157508
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||||| || |||||||||| ||| ||||||||||||| | |||||||||||||    
T  7157597 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgttggatgaaaacgtgatgcgtttggtaacaag 7157508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 35638766 - 35638853
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||| |||| |||||  ||||||||||| ||||||||||||||||||||||| ||| |||||||| |||||||    
T  35638766 tgtttggtaacacaaaaaaactagcttatagtttgttggattaacttataagctcgttagatgaaaatgtggcgtgtttgataacaag 35638853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 3703454 - 3703541
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| ||| ||||||||||||| ||||||  |||||||||||||||  || ||||||||||||||||||||| |||||||    
T  3703454 tgtttggtaacataaataagctagtttatagcttgttatattagcttataagcttattggatgaaaacgtgacgtgtttgataacaag 3703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 17540288 - 17540349
Alignment:
Q  175 ttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  17540288 ttatagcttgttggattagcttataagctcgttggattaaaacgtgacgtgtttggtaacaa 17540349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 13018994 - 13019047
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  13018994 tgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataag 13019047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 1923947 - 1924002
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  1923947 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 1924002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 11575620 - 11575675
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  11575620 gttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataag 11575675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 3033391 - 3033448
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  3033391 gttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagct 3033448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 3078640 - 3078588
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  3078640 tgtgtttggtaacacaaaaaagttagcttataacttgttggactagcttataa 3078588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 36944341 - 36944270
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaac 217  Q
    |||||||||||||||| ||||||||||| ||||| |||||| || || |||||||||| ||| |||||||||    
T  36944341 gttgtgtttggtaacataaaaaagctagcttatagcttgttagactaacttataagcttgttggatgaaaac 36944270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 36959464 - 36959546
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgttt 228  Q
    |||||||||||||||||||||||||||| ||||| ||||||  | ||| ||| ||||| ||| ||||||||| ||| ||||||    
T  36959464 gttgtgtttggtaacacaaaaaagctagcttatagcttgttaaactagtttacaagcttgttggatgaaaacatgatgtgttt 36959546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 2891073 - 2890992
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttg 229  Q
    |||||||||||||||||| || |||| |||||  |||||||| || |||||||||| ||| |||||||| |||| |||||||    
T  2891073 tgtgtttggtaacacaaataatctagcttatagtttgttggactaacttataagcttgttggatgaaaatgtgatgtgtttg 2890992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 4559579 - 4559524
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||||||||| ||||| |||||||||  ||||||||||||    
T  4559579 tgtgtttggtaacataaaaaagctagcttatagcttgttggacaagcttataagct 4559524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 5102804 - 5102714
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||||||| || |||||||  ||||  |||||||| ||||||||||| | ||| ||| ||||| ||| ||||||| ||||||    
T  5102804 gttgtgtttggtaacacgaataagctagcgtatagattgttggactagcttataagtttgttggatcaaaacatgatgtgtttgataacaa 5102714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 20017407 - 20017350
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||| ||||| |||||||||||| |||| ||||| ||||||||| |||||||||||||    
T  20017407 gttgcgtttgataacacaaaaaaactagcttatagcttgttggactagcttataagct 20017350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 20768969 - 20768912
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||| |||||||||||| |||||||||  |||||||| || ||||||||||    
T  20768969 gttgtgtttggcaacacaaaaaagttagtttatagtttgttggactatcttataagct 20768912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 23099361 - 23099320
Alignment:
Q  104 gggtttatgacagagttaactagttaaatcttgttatgtgat 145  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  23099361 gggttcatgacagaattaactagttaaatcttgttatgtgat 23099320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 8520497 - 8520552
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| || ||||||  ||||| ||||||||| |||||||||||||    
T  8520497 tgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagct 8520552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 8520567 - 8520622
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| |||||||||||  |||| |||||| || |||||||||||||    
T  8520567 tgtgtttggtaacataaaaaagctagcatatagcttgttagactagcttataagct 8520622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 7948517 - 7948485
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataa 180  Q
    |||||||||||||||||||||||||| ||||||    
T  7948517 tgtgtttggtaacacaaaaaagctagcttataa 7948485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 41356241 - 41356273
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataa 180  Q
    |||||||||||||||||||||| ||||||||||    
T  41356241 tgtgtttggtaacacaaaaaagttagtttataa 41356273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 6238188 - 6238277
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6238188 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 6238277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 39840296 - 39840205
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39840296 gttgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 39840205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 19801962 - 19801851
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  19801962 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 19801863  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  19801862 gagcttatagcg 19801851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 33984088 - 33984177
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33984088 tgtgtttggtaacacaaaaaagctagcttatagcttgttgaattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 33984177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 53284007 - 53284096
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  53284007 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaag 53284096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 20356803 - 20356689
Alignment:
Q  146 gttgtgtttggtaacacaaaaaag-ctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnn 244  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||           
T  20356803 gttgtgtttggtaacacaaaaaaaactagcttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggcaacaagttttttt 20356704  T
Q  245 catgagcttatagcg 259  Q
    |||||||||||||||    
T  20356703 catgagcttatagcg 20356689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 37114532 - 37114422
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatg 248  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||       ||||    
T  37114532 gtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttatatgaaaacgtggcgtgtttggtaacaagtttttttcatg 37114433  T
Q  249 agcttatagcg 259  Q
    |||||||||||    
T  37114432 agcttatagcg 37114422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 43374595 - 43374684
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43374595 tgtgtttggtaacacaaaaatgctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 43374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 2943752 - 2943662
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2943752 gttgtgtttggtaacacaaaaaa-ctagcttatagtttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 2943662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 49335290 - 49335179
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||       |||    
T  49335290 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagttcgttagaagaaaacgtgacgtgtttggtaataagcttttttcat 49335191  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  49335190 gagcttatagcg 49335179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 44448447 - 44448536
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  44448447 tgtgtttggtaacacaaaaaagctaacttatagcttgttggattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 44448536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 54683597 - 54683686
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54683597 tgtgtttggtaacataaataagctagcttataacttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaag 54683686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 55001843 - 55001756
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaaca 235  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  55001843 tgtgtttggtaacacaaaaaaactagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaaca 55001756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 37498203 - 37498291
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||| ||||  |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37498203 tgtgtttggtaacacaaaaaggctaacttatagtttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaa 37498291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 47633930 - 47633854
Alignment:
Q  161 acaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47633930 acaaaaaagttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 47633854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 19800925 - 19801037
Alignment:
Q  148 tgtgtttggtaacacaaaaaa-gctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnca 246  Q
    ||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||       ||    
T  19800925 tgtgtttggtaacacaaaaaaagttagcttatagcttgttggattagcttataagctcgttacatgaaaacgtggcgtgtttggtaacaagcttttttca 19801024  T
Q  247 tgagcttatagcg 259  Q
    |||||||||||||    
T  19801025 tgagcttatagcg 19801037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 45561414 - 45561304
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||       |||    
T  45561414 tgtgtttggtaacacaaaaa-gctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttaataacaagcttttttcat 45561316  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  45561315 gagcttatagcg 45561304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 25686986 - 25687097
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    ||||||||||||||||||||||||| ||||||  || ||||||||||||||||||| |||  |||||||||||| |||||||||||||||       |||    
T  25686986 tgtgtttggtaacacaaaaaagctaatttatagttttttggattagcttataagcttgttgtatgaaaacgtgatgtgtttggtaacaagcttttctcat 25687085  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  25687086 gagcttatagcg 25687097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 28778556 - 28778645
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||| || || |||||||||||||||||||||||||||||    
T  28778556 tgtgtttggtaacataaataagctagtttatagcttgttagattaacttataagttcattggatgaaaacgtgacgtgtttggtaacaag 28778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 44526037 - 44525948
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||  ||||||||||| |||||  |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||    
T  44526037 tgtgtttggtaacttaaaaaagctagcttatagtttgttggattagcttataagttcgttaaatgaaaacgtgatgtgtttggtaacaag 44525948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 24152674 - 24152761
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaa 233  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||| ||| ||||||||| ||| ||||||||||||| |||||||||||    
T  24152674 gttgtgtttggtaacacaaataagctagcttatagcttgttggactagtttataagctagttggatgaaaacgtgatgtgtttggtaa 24152761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 30653392 - 30653301
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||| ||||||||||||| ||| ||||||||| ||| |||||||||||||||    
T  30653392 gttgtgtttggtaacacaaaaaagttagcttatggcttgttggactagcttataagcttgttggatgaaaacatgatgtgtttggtaacaag 30653301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 36181469 - 36181358
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||  |||||  |||||  |||||||||||| ||||||||||||||||||| |||||||||||| |||       |||    
T  36181469 tgtgtttggtaacacaaaaaagctaacttatagtttgttaaattagcttataaactcgttagatgaaaacgtgtcgtgtttggtaataagcttttttcat 36181370  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  36181369 gagcttatagcg 36181358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 6287837 - 6287925
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||| ||| ||||| ||| || |||||||||||||| |  || ||||||||||||| ||||||||||||||    
T  6287837 tgtgtttggtaacacaaaaaagttagcttatagcttcttagattagcttataagtttattggatgaaaacgtgatgtgtttggtaacaa 6287925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 40674745 - 40674833
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataa-cttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaa 233  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||  || ||||||||| ||| |||||||||||    
T  40674745 gttgtgtttggtaacacaaaaaagttagcttataagcttgttggactagcttataagcttattggatgaaaacatgatgtgtttggtaa 40674833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 53431630 - 53431718
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||  ||| ||||| ||||||||| ||||||||||| | ||| ||||||||| ||| ||||||||||||||    
T  53431630 tgtgtttggtaacacaaaaaatgtagcttatagcttgttggactagcttataagtttgttggatgaaaacatgatgtgtttggtaacaa 53431718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 202290 - 202345
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  202290 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 202345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 51924025 - 51924081
Alignment:
Q  147 ttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  51924025 ttgtgtttggtaacacaaaaaaactagtttatagcttgttggactagcttataagct 51924081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 19912673 - 19912728
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  19912673 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 19912728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 30411351 - 30411296
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  30411351 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 30411296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 30653499 - 30653553
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30653499 tgtgtttggtaacacaaaaaagctag-ttatagcttgttggattagcttataagct 30653553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 55496132 - 55496067
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaac 217  Q
    |||||||||||||||||| ||| ||||| ||||||||| ||||||||||||| ||| |||||||||    
T  55496132 tttggtaacacaaaaaagttagcttatagcttgttggactagcttataagcttgttggatgaaaac 55496067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 7113614 - 7113559
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  7113614 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagct 7113559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 45549653 - 45549708
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||    
T  45549653 tgtgtttggtaacacaaaaaagctagcttatagcttgttgggctagcttataagct 45549708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 50792515 - 50792460
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| || ||||||||||||| ||||||||| |||||||||||||    
T  50792515 tgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataagct 50792460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 318493 - 318443
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttat 198  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  318493 tgtgtttggtaacacaaaaaagctagcttataacttattggactagcttat 318443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 50790826 - 50790879
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||| || ||||||| ||||||||||||||| |||||||||||||    
T  50790826 tgtttggtaacacgaataagctagcttataacttgttggactagcttataagct 50790879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 14269922 - 14269867
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  14269922 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagct 14269867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 26923638 - 26923583
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||||||||| ||||||||||||  | |||||||||||||    
T  26923638 tgtgtttggtaacataaaaaagctagcttataacttgttaaactagcttataagct 26923583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 51941101 - 51941192
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||| ||||||| || ||||||| ||||| ||||||||| || |||||||| | ||| ||| ||||| |||  ||||||||||||||    
T  51941101 gttgtgtttagtaacacgaataagctagcttatagcttgttggactaacttataagtttgttggatcaaaacatgatatgtttggtaacaag 51941192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 55610663 - 55610718
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||||||| |||| ||||| ||||||| | |||||||||||||    
T  55610663 tgtgtttggtaacacaaaaaaactagcttatagcttgttgtactagcttataagct 55610718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 7141221 - 7141179
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggat 190  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  7141221 tgtgtttggtaacacaaaaaagctagcttatagcttgttggat 7141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 31220179 - 31220257
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgttt 228  Q
    ||||||||||||  ||||||||| |||||||||| ||| |||||||| ||| || ||| ||| ||||| ||||||||||    
T  31220179 tgtttggtaacagtaaaaagctaatttataacttcttgaattagcttgtaatcttgttggattaaaacatgacgtgttt 31220257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 32012574 - 32012636
Alignment:
Q  175 ttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||| |||||| |||||||||||||| | |||||||||||| ||| ||||||| ||||||||    
T  32012574 ttatagcttgttagattagcttataagtttgttagatgaaaatgtggcgtgtttcgtaacaag 32012636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 1771937 - 1771884
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||| ||||||||||||| ||| ||||| ||||||||| |||||||||||||    
T  1771937 tgtttgataacacaaaaaagatagcttatagcttgttggactagcttataagct 1771884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 2390369 - 2390316
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||||||||||||||||||||| ||||| ||| ||||| || ||||||||    
T  2390369 tgtgtttggtaacacaaaaaagctagcttatagcttcttggactaacttataag 2390316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 28459610 - 28459667
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||| |||||||||||| |||||||||  |||||||| || ||||||||||    
T  28459610 gttgtgtttggcaacacaaaaaagttagtttatagtttgttggactatcttataagct 28459667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 36824450 - 36824499
Alignment:
Q  154 tggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||| |||||  ||||| ||||||||||||||||    
T  36824450 tggtaacacaaaaaagctaggttatagtttgtttgattagcttataagct 36824499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 36824619 - 36824668
Alignment:
Q  154 tggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||| |||||  ||||| ||||||||||||||||    
T  36824619 tggtaacacaaaaaagctaggttatagtttgtttgattagcttataagct 36824668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 43590534 - 43590587
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||    
T  43590534 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataag 43590587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 48369068 - 48369015
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| |||||||||||    
T  48369068 tgtgtctggtaacacaaataagctagtgtatagcttgttggactagcttataag 48369015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 48953028 - 48953085
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||| |||||||||||||    
T  48953028 gttgtgtttggtaacacggataagctagcttatagcttgttggactagcttataagct 48953085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 49648916 - 49648864
Alignment:
Q  151 gtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  49648916 gtttggtaacacgaataagctagcttatagcttgttggactagcttataagct 49648864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 31997832 - 31997887
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||| |||||||||| ||| ||| |||||| |||||||| |||||||||||||    
T  31997832 tgtgtttagtaacacaaacaagttagattataatttgttggactagcttataagct 31997887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 30996743 - 30996709
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataa 180  Q
    |||||||||||||||||||| ||||||||||||||    
T  30996743 gttgtgtttggtaacacaaataagctagtttataa 30996709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 55660548 - 55660598
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    |||||||||||| ||| ||||||| ||||| ||||||||| ||||||||||    
T  55660548 tgtttggtaacataaataagctagcttatagcttgttggactagcttataa 55660598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 49646027 - 49646080
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||| || ||| ||| ||||| | |||||||||||||||||||||    
T  49646027 tgtttggtaacacgaataagttagcttatagcctgttggattagcttataagct 49646080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 19871072 - 19871020
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    ||||||||||||||| || ||||||| ||||| |||| |||| ||||||||||    
T  19871072 tgtgtttggtaacacgaataagctagcttatagcttgctggactagcttataa 19871020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 49491607 - 49491543
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttaga 210  Q
    ||||||||||||||||  || ||||||| |||||  |||||| ||||||||||||| | ||||||    
T  49491607 gttgtgtttggtaacaacaagaagctagcttatagtttgttgaattagcttataagtttgttaga 49491543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 43800868 - 43800757
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  43800868 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 43800769  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  43800768 gagcttatagcg 43800757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 22215109 - 22215200
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22215109 gttgtgtttggtaacacaaaaaagttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 22215200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 284818 - 284907
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  284818 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaag 284907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 631059 - 630970
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  631059 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaag 630970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 816871 - 816782
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  816871 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaag 816782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 39733726 - 39733815
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  39733726 tgtgtttggtaacacaaaaaagctagcttataccttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaacaag 39733815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 35160371 - 35160280
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35160371 gttgtgtttggtaacacaaaaaagctagcttatagcttattggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaag 35160280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 25100314 - 25100203
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  25100314 tgtgtttggtaacacaaaaaagctagcttatagcttgttagcttagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 25100215  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  25100214 gagcttatagcg 25100203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 38747059 - 38746967
Alignment:
Q  146 gttgtgtttggtaacacaaaaaa-gctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  38747059 gttgtgtttggtaacacaaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtggttggtaacaag 38746967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 3512469 - 3512560
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  3512469 gttgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaag 3512560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 25099413 - 25099488
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacg 223  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25099413 tgtgtttggtaacacaaaaaagctagcttataacttgttggattagcttataagctcgttagatgaaaacatgacg 25099488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 2773682 - 2773593
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  2773682 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttggatgaaaacgtgacgtgcttggtaacaag 2773593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 20697605 - 20697516
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  20697605 tgtgtttggtaatacaaaaaagttagcttatagcttgttggattagcttataagctcgttagatgaaaacataacgtgtttggtaacaag 20697516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 14911765 - 14911876
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    ||||||| ||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||       |||    
T  14911765 tgtgtttagtaacacaaaaaatctagcttatagtttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttggtaacaagtttttttcat 14911864  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  14911865 gagcttatagcg 14911876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 17121817 - 17121903
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||  |||||||||||||||    
T  17121817 tgtttggtaacacaaaaaagctagtttataggttgttggattaacttataagttcgttagatgaaaacgtagcgtgtttggtaacaa 17121903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 40529501 - 40529612
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||| |||||||||||| ||| ||||||||||||||||       |||    
T  40529501 tgtgtttggtaacacaaaaaagctagcttatagcttgtttgtttagcttataagcttgttagatgaaaatgtgtcgtgtttggtaacaagcttttttcat 40529600  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  40529601 gagcttatagcg 40529612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 5574602 - 5574691
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||| ||| |||||  |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  5574602 tgtgtttggtaacacaaaaaagttagcttatagtttgttgaattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 5574691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 35057402 - 35057289
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||||||||| ||| ||| ||| ||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||       |    
T  35057402 gttgtgtttggtaacataaataagatagcttatagcttgttagattagcttataagctcgttggatgcaaacgtgacgtgtttggtaacaagcttttctc 35057303  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  35057302 atgagcttatagcg 35057289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 5838256 - 5838345
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||| ||| | ||||||||||||||    
T  5838256 tgtgtttggtaatacaaaaaagctaacttatagcttgttggattagcttataagcttgttagatgaaaatgtggcatgtttggtaacaag 5838345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 36859227 - 36859339
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||| |||| |||||| | ||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||       |    
T  36859227 gttgtgtttgctaacccaaaaa-gttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacctatttggtaacaagtttttttc 36859325  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  36859326 atgagcttatagcg 36859339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 16785615 - 16785706
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||| |||| ||||| ||| ||||||| ||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16785615 gttgtatttgataacataaataagctagcttataacttattaaattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaag 16785706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 24804586 - 24804497
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||| ||||||||||||||||||| ||||| ||| |||||||||| |||||||| ||| |||||||| |||| |||||||||||||||    
T  24804586 tgtgttcggtaacacaaaaaagctagcttatagcttcttggattagcctataagcttgttggatgaaaatgtgatgtgtttggtaacaag 24804497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 16786630 - 16786542
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||| |||||||||||||||  ||||| ||| ||||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  16786630 tgtgtttggcaacacaaaaaagctaacttatagcttcttggattagcttataagcttgttgaatgaaaacgtgatgtgtttggtaacaa 16786542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 21266961 - 21266874
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| ||| ||||||| ||| | |||||| |||||||||| |||||| || |||||||||||||||||||||||||||||    
T  21266961 tgtttggtaacataaataagctagcttaaagcttgttagattagcttagaagctcattggatgaaaacgtgacgtgtttggtaacaag 21266874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 12208806 - 12208861
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  12208806 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 12208861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 12453234 - 12453289
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  12453234 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 12453289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 18146342 - 18146397
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  18146342 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 18146397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 43150252 - 43150307
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  43150252 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 43150307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 45069918 - 45069863
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  45069918 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 45069863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 34903477 - 34903388
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||| || |||| ||| | ||||||||| ||||||||||||| ||| ||||||||| ||| ||||| | |||||||    
T  34903477 tgtgtttggtaacacaaataaactagcttacaccttgttggactagcttataagcttgttggatgaaaacatgatgtgttggataacaag 34903388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 35398060 - 35398017
Alignment:
Q  194 cttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  35398060 cttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 35398017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 39104277 - 39104222
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||| |||||||| |||||| |||||||| |||||||||||||    
T  39104277 tgtgtttggtaacacaagaaagctagcttataatttgttggactagcttataagct 39104222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 41355624 - 41355699
Alignment:
Q  161 acaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||| |||| ||||| ||  ||||||||||||||||| | ||| ||||||||||||| ||||||||||||||    
T  41355624 acaaaaaaactagcttatagctccttggattagcttataagtttgttggatgaaaacgtgatgtgtttggtaacaa 41355699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 42353791 - 42353736
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||    
T  42353791 gttgtgtttggtaatacaaaaaagttagtttatagtttgttggattagcttataag 42353736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 43873958 - 43874013
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||    
T  43873958 tgtgtttggtaccacaaaaaagctagtttatagcttgttgaactagcttataagct 43874013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 16785863 - 16785904
Alignment:
Q  196 tataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  16785863 tataagctcgttggatgaaaacgtgacgtgtttggtaacaag 16785904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 38760911 - 38760854
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||| || |||||||||| ||||||||| |||||||||||||    
T  38760911 gttgtgtttggtaatacaaataaactagtttatagcttgttggactagcttataagct 38760854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 43129590 - 43129642
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    ||||||||||||||| || ||||||||||||| ||||||||| ||||||||||    
T  43129590 tgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataa 43129642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 45237892 - 45237837
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||| |  ||||||||||||    
T  45237892 tgtgtttggtaacacaaaaaagctagcttatagcttgttgaacaagcttataagct 45237837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 4477718 - 4477665
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| ||| |||||||    
T  4477718 tgtgtttggtaacacaaaaaagttagcttatagcttgttggactagattataag 4477665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 31642850 - 31642793
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||| ||| |||||||||    
T  31642850 gttgtgtttggtaacacgaataagctagcttatagcttgttggactagattataagct 31642793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 45237065 - 45237012
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttata 199  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| | |||||||||    
T  45237065 gttgtgtttgataacacaaaaaagctagcttataactttttgtactagcttata 45237012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 7303338 - 7303370
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataa 180  Q
    |||||||||||||||||||||||||||||||||    
T  7303338 tgtgtttggtaacacaaaaaagctagtttataa 7303370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 35253131 - 35253074
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||| ||||||| |||||  ||| ||||  ||||||||||||    
T  35253131 gttgtgtttggtaacacaaacaagctagcttatagtttgctggacaagcttataagct 35253074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 41206634 - 41206581
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||| |||||  |||||||||||||||| ||||||| |||| ||||||||    
T  41206634 tgtgtttgataacaacaaaaagctagtttatagcttgttgaattaacttataag 41206581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 38364571 - 38364515
Alignment:
Q  147 ttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||| || || |||| ||||| ||||||||| ||| |||||||||    
T  38364571 ttgtgtttggtaacacgaataaactagcttatagcttgttggactagtttataagct 38364515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 44338761 - 44338797
Alignment:
Q  144 atgttgtgtttggtaacacaaaaaagctagtttataa 180  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  44338761 atgttgtgtttggtaacacaaataagctagcttataa 44338797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 27826709 - 27826820
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  27826709 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 27826808  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  27826809 gagcttatagcg 27826820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 28494375 - 28494264
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  28494375 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 28494276  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  28494275 gagcttatagcg 28494264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 42329122 - 42329011
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||    
T  42329122 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 42329023  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  42329022 gagcttatagcg 42329011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 46672506 - 46672617
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       |||    
T  46672506 tgtgtttgataacacaaaaaagctagcttataacttgttggattagcttataagctcgttagatgaaaatgtgacgtgtttggtaacaagcttttttcat 46672605  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  46672606 gagcttatagcg 46672617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 4060350 - 4060463
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |    
T  4060350 gttgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagctttttcc 4060449  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  4060450 atgagcttatagcg 4060463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 42265372 - 42265284
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42265372 tgtgtttggtaactcaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 42265284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 28958223 - 28958132
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  28958223 gttgtgtttggtaacacaaaaaagctagcttatagcttgttggattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 28958132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 6243867 - 6243953
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaac 234  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6243867 tgtgtttggtaacacaacaaagctagtttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaac 6243953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 31031993 - 31031904
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  31031993 tgtgtttggtaacacaaaaaagctagtttatagcttgttggattaacttataagctcgttaaatgaaaacgtggcgtgtttggtaacaag 31031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 35647418 - 35647505
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  35647418 tgtttggtaacacaaaaaagctagcttatagcttgttggatttgcttataagctcgttagatgaaaatgtgacgtgtttggtaacaag 35647505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 46536122 - 46536233
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| || || |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||       |||    
T  46536122 tgtgtttggtaacacaaaaaagctagcttgtagcttgttggattagcttataaactcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 46536221  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  46536222 gagcttatagcg 46536233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 43156568 - 43156657
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  43156568 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttgataacaag 43156657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 46350935 - 46350847
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  46350935 tgtgtttggtaacacaaaaaagttagcttatagcttgttggattagtttataagctcgttagatgaaaacatgacgtgtttggtaacaa 46350847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 6476924 - 6477015
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  6476924 gttgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaag 6477015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 43337633 - 43337744
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||       |||    
T  43337633 tgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataagctcgttagacgaaaacgttgcgtgtttggtaacaagcttttttcat 43337732  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  43337733 gagcttatagcg 43337744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 46615778 - 46615689
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  46615778 tgtgtttggtaacacaaaaaagctaatttatagtttgttagattagcttataagctcgttagatgaaaacgtagcgtgtttggtaacaag 46615689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 46534408 - 46534496
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||    
T  46534408 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgttggatgaaaacgtgatgtgtatggtaacaa 46534496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 31226968 - 31226881
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  31226968 tgtttggtaacacaaaaaagttagcttataacttgttgaattagtttataagctcattagatgaaaatgtgacgtgtttggtaacaag 31226881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 25696033 - 25696144
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||| ||| || |||| ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||       |||    
T  25696033 tgtgtttggtaacataaataaactagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcat 25696132  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  25696133 gagcttatagcg 25696144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 29994315 - 29994204
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||| ||||||||| | |||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||       |||    
T  29994315 tgtgtttggtaacataaaaaagctcgcttatagtttgttagattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 29994216  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  29994215 gagcttatagcg 29994204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 28235285 - 28235374
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||| ||||| ||| ||||||| |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28235285 tgtgtttgataacataaataagctagcttatagtttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaag 28235374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 48935236 - 48935323
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||| |||  |||||||||||||||||||||||    
T  48935236 gtgtttggtaacacaaataagctagcttatagcttgttggattagtttataagctcgttggatagaaacgtgacgtgtttggtaacaa 48935323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 21920895 - 21920784
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||| |||  |||||||||||| |||||||||||||||       |||    
T  21920895 tgtgtttggtaacacaaataagctagcttatagcttgttggactagcttataagctagttgaatgaaaacgtgatgtgtttggtaacaagcttttctcat 21920796  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  21920795 gagcttatagcg 21920784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 14792218 - 14792128
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||| |||||||||||||| ||| ||| ||||| |||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  14792218 gttgtatttggtaacacaaataagttagcttatagcttgttagattagcttataagctcgttggattaaaacgtgatgtgtttggtaacaa 14792128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 981337 - 981426
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||||||||||| |||  |||||||||||| ||||||| |||||||    
T  981337 tgtgtttggtaacacaaaaaagttagcttatagtttgttggattagcttataagctagttgaatgaaaacgtgatgtgtttgataacaag 981426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 42997514 - 42997603
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||| ||||||| |||||| || ||||||  |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  42997514 tgtgtttagtaacactaaaaagttactttatagtttgttggactagcttataagctcgttggatgaaaacgtgatgtgtttggtaacaag 42997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 43158294 - 43158206
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataact-tgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaa 233  Q
    |||||||||||||||||||||||| ||| ||||| || |||| |||||| ||||||||||||| ||||||||||||| |||||||||||    
T  43158294 gttgtgtttggtaacacaaaaaagttagcttatatctctgttagattagtttataagctcgttggatgaaaacgtgatgtgtttggtaa 43158206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 3370449 - 3370538
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| ||||||||| || ||||||  || ||||||||| ||||||| | ||| ||||||||||||| |||||||||||||||    
T  3370449 tgtgtttggtaatacaaaaaagttaatttatagttttttggattagtttataagtttgttggatgaaaacgtgatgtgtttggtaacaag 3370538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 30524049 - 30523964
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||| ||||||| ||||||| ||||| |||||||||||| || ||||||| ||| ||||||||||||| |||| ||||||||||    
T  30524049 tttggtgacacaaataagctagcttatagcttgttggattaactcataagcttgttggatgaaaacgtgatgtgtatggtaacaag 30523964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 46349983 - 46349914
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaac 217  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||| |||||||||| ||| |||||||||    
T  46349983 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattaacttataagcttgttggatgaaaac 46349914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 47479826 - 47479875
Alignment:
Q  188 gattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47479826 gattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaag 47479875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 42328230 - 42328178
Alignment:
Q  181 cttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaa 233  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  42328230 cttgttggattagcttataagctcgttagatgaaaatgtgacgagtttggtaa 42328178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 30582671 - 30582726
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  30582671 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 30582726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 35670453 - 35670398
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  35670453 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 35670398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 37658214 - 37658159
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  37658214 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 37658159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 40061163 - 40061218
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  40061163 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 40061218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 8932599 - 8932544
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||    
T  8932599 tgtgtttggtaacacaaataaattagtttataacttgttggactagcttataagct 8932544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 9806688 - 9806633
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||    
T  9806688 tgtgtttggtaacataaaaaagttagtttatagcttgttggactagcttataagct 9806633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 39870116 - 39870065
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  39870116 tttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 39870065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 31619515 - 31619560
Alignment:
Q  158 aacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  31619515 aacacaaaaaagctagtttatagcttgttggactagcttataagct 31619560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 36121429 - 36121486
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||| ||| ||| ||||| ||| |||||||||||||||||||    
T  36121429 gttgtgtttggtaacacaaagaagatagcttatagcttattggattagcttataagct 36121486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 44818721 - 44818773
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    |||||||||||||| ||||||||||| |||||| |||||||| ||||||||||    
T  44818721 tgtgtttggtaacataaaaaagctagcttataatttgttggactagcttataa 44818773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 596211 - 596156
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| || |||||||  |||||||||||||| |||||||||||||    
T  596211 tgtgtttggtaacacgaataagctaggatataacttgttggactagcttataagct 596156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 44570932 - 44570987
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||| ||| ||||| ||| ||||| |||||||||||||    
T  44570932 tgtgtttggtaacacaaaaaagttagcttatagcttattggactagcttataagct 44570987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 31436348 - 31436294
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||| || |||||||    
T  31436348 gttgtgtttcgtaacacaaaaaagctagcttatagcttgttggactaacttataa 31436294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 30999445 - 30999388
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||| ||| ||||||||| ||| ||||| ||||| |||||||    
T  30999445 gttgtgtttggtaacacaaataagttagtttatagcttattggactagctcataagct 30999388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 31030861 - 31030808
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||||||||||||    
T  31030861 tgtttggtaacataaaaaagctaatttatagtttgttggactagcttataagct 31030808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 43544997 - 43544940
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||| || ||||||  ||||| ||||||||| |||||||||||||    
T  43544997 gttgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagct 43544940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 44103664 - 44103752
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||||||||||| | |   ||||  ||||||||||||||||||| ||  || |||||||| |||| ||||||| ||||||    
T  44103664 tgtgtttggtaacacaaaaaaacaaccatatagtttgttggattagcttataaactaattggatgaaaatgtgatgtgtttgataacaa 44103752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 47252217 - 47252269
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    ||||||||||||||| || ||||||  ||||| ||||||||||||||||||||    
T  47252217 tgtgtttggtaacacgaataagctaccttatagcttgttggattagcttataa 47252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 1602078 - 1602024
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||| |||||||||||||    
T  1602078 tgtgtttggtaacataaaaa-gctagcttatagcttgttggactagcttataagct 1602024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 25751111 - 25751166
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||| |||||||||||||| || ||||| || |||| |||||    
T  25751111 tgtgtttggtaacacaaataagctagtttataatttattggactaccttacaagct 25751166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 31969565 - 31969510
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||| ||| |||||  |||||||| || ||||||||||    
T  31969565 tgtgtttggtaacacaaaaaagttagcttatagattgttggactaacttataagct 31969510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 42328284 - 42328229
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||  |||||||||| ||||| || |||| |||||||||||||||    
T  42328284 tgtgtttggtaacaacaaaaagctagcttatagctagttgaattagcttataagct 42328229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 42329654 - 42329599
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||||||| | || ||||| ||||||||| ||| |||||||||    
T  42329654 tgtgtttggtaacacaaaaaaaccagcttatagcttgttggactagtttataagct 42329599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 42825998 - 42826041
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttgga 189  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||    
T  42825998 gttgtgtttggtaacacaaataagttagtttatagcttgttgga 42826041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 35747025 - 35747063
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgtt 186  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  35747025 tgtgtttggtaacacaaaaaagctagcttatagcttgtt 35747063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 585991 - 585934
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||| ||||||| || ||||||  ||||| ||||||||| |||||||||||||    
T  585991 gttgtgtttagtaacacgaataagctaacttatagcttgttggactagcttataagct 585934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 33982416 - 33982359
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||| |||| || ||||||| ||||| |||||| || |||||||||||||    
T  33982416 gttgtgtttggtgacacgaataagctagcttatagcttgttagactagcttataagct 33982359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 8e-37; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 24119338 - 24119227
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  24119338 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 24119239  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  24119238 gagcttatagcg 24119227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 13756419 - 13756330
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13756419 tgtgtttggtaacacgaaaaagctagtttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaag 13756330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 20992362 - 20992253
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatga 249  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||||    
T  20992362 tgtttggtaacacaaaaaagctagtttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatga 20992263  T
Q  250 gcttatagcg 259  Q
    ||||||||||    
T  20992262 gcttatagcg 20992253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 20645658 - 20645747
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20645658 tgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagctcgttagatgaaaatgtgacgtgtttggtaacaag 20645747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 22707291 - 22707380
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  22707291 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataagctcgttagatgaaaacgtgacgtgattggtaacaag 22707380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 21860232 - 21860345
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||       |    
T  21860232 gttgtgtttagtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagacgaaaacgtggcgtgtttggtaacaagtttttttc 21860331  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  21860332 atgagcttatagcg 21860345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 25023552 - 25023443
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatga 249  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||       |||||    
T  25023552 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatga 25023453  T
Q  250 gcttatagcg 259  Q
    ||||||||||    
T  25023452 gcttatagcg 25023443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 21778185 - 21778096
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||  ||  |||||||||||||||    
T  21778185 tgtgtttggtaacacaaaaaagctagtttatagcctgttggattaacttataagctcgttagatgaaaatctggtgtgtttggtaacaag 21778096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 12130481 - 12130569
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||  | |||||||||||||||| |||||||||||||||    
T  12130481 tgtgtttggtaacacaaaaaagttagcttatagcttgttggattagcttataaatttgttagatgaaaacgtggcgtgtttggtaacaa 12130569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 21459022 - 21459111
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||| | | ||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  21459022 tgtgtttggtaacatagataagctagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttgataacaag 21459111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 1789787 - 1789842
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  1789787 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 1789842  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 18368833 - 18368778
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  18368833 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 18368778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 6834143 - 6834057
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||| ||| ||||||  |||||  |||||| | ||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  6834143 tgtttggtaacataaataagctatcttatagtttgttgaactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaa 6834057  T

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Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 18801700 - 18801755
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||    
T  18801700 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagct 18801755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 13866263 - 13866316
Alignment:
Q  147 ttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||    
T  13866263 ttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataa 13866316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 4976524 - 4976579
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||||||| |||| ||||| | ||||||| |||||||||||||    
T  4976524 tgtgtttggtaacacaaaaaaactagcttatagcctgttggactagcttataagct 4976579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 15508349 - 15508404
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  15508349 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagct 15508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 32562512 - 32562457
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||    
T  32562512 gttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataag 32562457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 190921 - 190978
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||| ||| |||||||||    
T  190921 gttgtatttgataacacaaaaaagttagtttatagcttgttggactagtttataagct 190978  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 5090183 - 5090130
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||    
T  5090183 tgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataag 5090130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 34574696 - 34574639
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||| |||||| |  ||| ||| ||||||||||||||| |||||||||||||    
T  34574696 gttgtgtttgataacacgagtaagttagcttataacttgttggactagcttataagct 34574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 8321530 - 8321419
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  8321530 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 8321431  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  8321430 gagcttatagcg 8321419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 34436074 - 34435963
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  34436074 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 34435975  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  34435974 gagcttatagcg 34435963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 41991783 - 41991672
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||    
T  41991783 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcat 41991684  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  41991683 gagcttatagcg 41991672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 19274730 - 19274819
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19274730 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttggatgaaaatgtgacgtgtttggtaacaag 19274819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 30318043 - 30317932
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||       |||    
T  30318043 tgtgtttggtaacacaaaaatgctagcttatagtttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttgataacaagattttttcat 30317944  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  30317943 gagcttatagcg 30317932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 12055614 - 12055525
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  12055614 tgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagctccttagatgaaaacgtggcgtgtttggtaacaag 12055525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 2558003 - 2557890
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnnc 245  Q
    |||||||||||||||||||||||||||  ||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||       |    
T  2558003 gttgtgtttggtaacacaaaaaagctaacttatagcttgtttgattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttc 2557904  T
Q  246 atgagcttatagcg 259  Q
    ||||||||||||||    
T  2557903 atgagcttatagcg 2557890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 150 - 259
Target Start/End: Original strand, 8879366 - 8879475
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatga 249  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||       |||||    
T  8879366 tgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagttcgttagatgaaaacgtgacgtatttggtaacaagcttttttcatga 8879465  T
Q  250 gcttatagcg 259  Q
    ||||||||||    
T  8879466 gcttatagcg 8879475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 48050994 - 48051081
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaaca 235  Q
    |||||||| |||| |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48050994 tgtgtttgttaacccaaaaaagctagcttatagcttgttggattaacttataagctcgttagatgaaaacgtgacgtgtttggtaaca 48051081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 12764671 - 12764782
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | | ||||||||||||| |||||||||||||||       |||    
T  12764671 tgtgtttggtaacacaaaaaagctagtttatagctttttggattagcttataagcttgctggatgaaaacgtgatgtgtttggtaacaagcttttctcat 12764770  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  12764771 gagcttatagcg 12764782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 52184926 - 52184815
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||       |||    
T  52184926 tgtgtttggtaacacaaaaaagttagcttatagcttgttagattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcat 52184827  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  52184826 gagcttatagcg 52184815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 52959292 - 52959381
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||| ||||||| |||||  ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  52959292 tgtgtttggtaacacaaataagctagcttatagtttgttggattaacttataagctcgttggatgaaaacgtgacgtgtttggtaacaag 52959381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 17666802 - 17666890
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    ||||||||||||| |||||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  17666802 tgtgtttggtaacccaaaaaagctagcttatagcttattggattaacttataagctcgttggatgaaaacgtgacgtgtttggtaacaa 17666890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 54463553 - 54463444
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncatga 249  Q
    |||||||||||||||||||| ||  |||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  54463553 tgtttggtaacacaaaaaagttaacttatagtttgttggattatcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatga 54463454  T
Q  250 gcttatagcg 259  Q
    ||||||||||    
T  54463453 gcttatagcg 54463444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 9558959 - 9558848
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||| ||| ||||||| ||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||       |||    
T  9558959 tgtgtttggtaacataaataagctagcttatagcttgttagattagcttataagctcgttggaagaaaacgtgacgtgtttggtaacaagcttttctcat 9558860  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  9558859 gagcttatagcg 9558848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 51062910 - 51063021
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||| ||||||||||||||||| ||||| ||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||       |||    
T  51062910 tgtgtttgttaacacaaaaaagctagcttatagcttgttgaattatcttataagttcgttagatgaaaacgtgacgtgtttgataacaagcttttttcat 51063009  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  51063010 gagcttatagcg 51063021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 42528154 - 42528066
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  42528154 gtgtttgataacacaaaaaagctagcttatagcttgttggactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaag 42528066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 32999756 - 32999670
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaac 234  Q
    |||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  32999756 tgtgtttgataacacaaaaaagctagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaac 32999670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 51980732 - 51980818
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaac 234  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  51980732 tgtgtttggtaacacaaaaaagttagtttatagcttgttggactagcttataagcttgttggatgaaaacatgatgtgtttggtaac 51980818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 1361671 - 1361760
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||    
T  1361671 tgtgtttcgtaacacaaaaaggctagcttatagcttgttggattagcttataagctcgttagataaaaatgtggcgtgtttgataacaag 1361760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 6124713 - 6124799
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||| ||||||||||||| ||| ||||||||||||||| || |||||||||| ||| ||||||||||||| ||||||||||||||    
T  6124713 tgtttgataacacaaaaaagatagcttataacttgttggactatcttataagcttgtttgatgaaaacgtgatgtgtttggtaacaa 6124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 35405543 - 35405627
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||| ||||||||||||||||| |||||  |||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||    
T  35405543 tttgataacacaaaaaagctagcttatagtttgttggattagtttataaactcgttagatgaaaacgtgacgtatttgataacaa 35405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 51760469 - 51760560
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||| |||||||||||||| ||| ||| || || |||||||| |||||||||| ||| ||||||||||||| |||||||||||||||    
T  51760469 gttgtgtttagtaacacaaaaaagttagcttacaatttattggattaacttataagcttgttggatgaaaacgtgatgtgtttggtaacaag 51760560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 36237836 - 36237947
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||| |||||| |||| |||||  ||||||||||| |||||||||||||||||| |||| ||| ||| ||||||||||||       |||    
T  36237836 tgtgtttggtaacataaaaaaactagcttatagtttgttggattaacttataagctcgttagataaaaatgtggcgtatttggtaacaagcttttttcat 36237935  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  36237936 gagcttatagcg 36237947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 4070816 - 4070901
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaa 233  Q
    |||||||||||||||||| |||||||||||||  |||||| | ||||||||||| | ||| ||||||||||||| |||||||||||    
T  4070816 tgtgtttggtaacacaaataagctagtttatagtttgttgaactagcttataagttagttggatgaaaacgtgatgtgtttggtaa 4070901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 30743113 - 30743024
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||| ||| | ||||||| |||||||||  |||||||||||||||||||||| |||||||||||| |||  |||||||||||||||    
T  30743113 tgtgtttgataatataaaaaagttagtttatagtttgttggattagcttataagctggttagatgaaaatgtggtgtgtttggtaacaag 30743024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 42292992 - 42293066
Alignment:
Q  163 aaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||| ||||||||||  |||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  42292992 aaaaaaactagtttatagtttgttggactagcttataagttcgttggatgaaaacgtgatgtgtttggtaacaag 42293066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 5505932 - 5505985
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  5505932 tgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataag 5505985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 12122273 - 12122184
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||  || ||||||| ||||| ||||||| ||||||||||||||| |||  || |||| ||||||||||||||||||||    
T  12122273 tgtgtttggtaacaacaagaagctagcttatagcttgttgaattagcttataagcttgttgtatcaaaatgtgacgtgtttggtaacaag 12122184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 32111661 - 32111604
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  32111661 gttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 32111604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 12122980 - 12122925
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  12122980 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 12122925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 46114989 - 46115043
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  46114989 gtgtttggtaacacaaataagctagcttatagcttgttggattagcttataagct 46115043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 36660233 - 36660180
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  36660233 tgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 36660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 43968455 - 43968362
Alignment:
Q  144 atgttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||||||||    | ||| ||| |||||| |||||| ||||||||||||||| ||| ||| ||||| |||||||||||||||||||    
T  43968455 atgttgtgtttggtaacgacgagaagttagcttataatttgttgaattagcttataagcttgttggatcaaaacatgacgtgtttggtaacaag 43968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 36806926 - 36806977
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  36806926 tttggtaacacaaaaaagctagtttttagcttgttggactagcttataagct 36806977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 40374607 - 40374552
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||    
T  40374607 tgtgtttggtaacacaaaaaagctaacttatagcttgttggactagcttataagct 40374552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 55226297 - 55226384
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    |||||||||||| | | ||||||  ||||| || ||| |||||||||||||||||||| |||||||||||||| | |||| |||||||    
T  55226297 tgtttggtaacatagataagctaacttatagctcgttagattagcttataagctcgttggatgaaaacgtgacatatttgataacaag 55226384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 39129372 - 39129429
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||| || ||||||||||    
T  39129372 gttgtgtttggtaacataaaaaagctagcttatagcttgttggactatcttataagct 39129429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 42167433 - 42167376
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  42167433 gttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagct 42167376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 45355130 - 45355182
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||    
T  45355130 tgtgtttggtaacacaaaaaagctagtttatagcttcttggactaggttataa 45355182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 6586265 - 6586320
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||||| |||||||||  |||||||| |||||||||||||    
T  6586265 tgtgtttggtaacataaaaaagttagtttatagtttgttggactagcttataagct 6586320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 13353416 - 13353455
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttg 187  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  13353416 tgtgtttggtaacacaaaaaagctagtttatagcttgttg 13353455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 17666613 - 17666704
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||||   | ||||||| ||||| ||||||| ||||||||||||||| ||| ||| |||||   |||| ||||||||||||    
T  17666613 gttgtgtttggtaacaacgagaagctagcttatagcttgttgaattagcttataagcttgttggatcaaaacacaacgtatttggtaacaag 17666704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 46668341 - 46668396
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| || ||||||||||    
T  46668341 tgtgtttggtaacataaaaaagctagcttatagcttgttggactaacttataagct 46668396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 43860724 - 43860781
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||| || || ||||||| ||||| ||||||||| |||||||||||||    
T  43860724 gttgtgtttggtaatacgaataagctagcttatagcttgttggactagcttataagct 43860781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 45356517 - 45356428
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||||||||||  || ||||||  ||||| ||||||| ||||||||||||||| ||| ||| |||| |||| || ||| ||||||||    
T  45356517 tgtgtttggtaacatcaagaagctaacttatagcttgttgaattagcttataagcttgttggatcaaaatgtgatgtatttagtaacaag 45356428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 50935711 - 50935768
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||||    
T  50935711 gttgtgtttggtaacacgaataagctagcttatagcttattggactagcttataagct 50935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 10809581 - 10809517
Alignment:
Q  165 aaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttg 229  Q
    ||||||||| ||||| ||| ||| ||||||||||||||| ||| ||| ||||| |||||||||||    
T  10809581 aaaagctagcttatagcttcttgaattagcttataagcttgttggatcaaaacatgacgtgtttg 10809517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 25999266 - 25999186
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttgg 230  Q
    |||||||||||||||||||| ||| ||||| ||| ||| | ||  ||||||| | ||| ||||||||||||| ||||||||    
T  25999266 tgtttggtaacacaaaaaagttagcttatagcttattgaactaatttataagtttgttggatgaaaacgtgatgtgtttgg 25999186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 7041730 - 7041785
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||  || ||||||| ||||| ||||||||| |||||||||||||    
T  7041730 tgtgtttggtaacaagaataagctagcttatagcttgttggactagcttataagct 7041785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 22978083 - 22978134
Alignment:
Q  152 tttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||| || ||||||| ||||| ||||||||| |||||||||||||    
T  22978083 tttggtaacacgaataagctagcttatagcttgttggactagcttataagct 22978134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 34785977 - 34785922
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||| | ||||||| ||||| ||| ||||| |||||||||||||    
T  34785977 tgtgtttggtaacacacataagctagcttatagcttattggactagcttataagct 34785922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 39129300 - 39129355
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||| ||||||||| || |||||||| |||| ||||||||| |||||||||||||    
T  39129300 tgtgtgtggtaacacgaataagctagtctatagcttgttggactagcttataagct 39129355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 41888809 - 41888864
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    ||||||||||||||| || ||||||| |||||  |||||||| |||||||||||||    
T  41888809 tgtgtttggtaacacgaataagctagcttatagtttgttggactagcttataagct 41888864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 48747404 - 48747459
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||| ||| |||||  || ||||| |||||||||||||    
T  48747404 tgtgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagct 48747459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 54598190 - 54598245
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataag 201  Q
    ||||||||| |||||| ||| ||| ||| ||||| |||||||||||||||||||||    
T  54598190 gttgtgttttgtaacataaataaggtagcttatagcttgttggattagcttataag 54598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 40980241 - 40980187
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    ||||||||||||||||||||||| |||| |||||  |||||| | ||||||||||    
T  40980241 gttgtgtttggtaacacaaaaaaactagcttatagtttgttgaactagcttataa 40980187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 42877240 - 42877294
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagc 202  Q
    ||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||||    
T  42877240 tgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagc 42877294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 48071974 - 48072031
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||| |||||| || || |||| ||||| ||||||||| |||||||||||||    
T  48071974 gttgtgtttgttaacacgaataaactagcttatagcttgttggactagcttataagct 48072031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 50198104 - 50198016
Alignment:
Q  149 gtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaag 237  Q
    ||||||| ||| ||||| |||||||||||||  |  ||||||||  ||||||  | ||| ||||||||||||| |||||| ||||||||    
T  50198104 gtgtttgataatacaaataagctagtttatagttaattggattaatttataaatttgttggatgaaaacgtgatgtgtttagtaacaag 50198016  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 50938336 - 50938284
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    ||||||||||||||| || ||| ||| ||||| ||||||||| ||||||||||    
T  50938336 tgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataa 50938284  T

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Target: scaffold0076 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 14292 - 14202
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||||||||| |||||  || ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14292 gttgtgtttggtaacacaaaaaagctagcttatagtttattggattagattataagctcgttagatgaaaacgtgacgtgtttggtaacaa 14202  T

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Target: scaffold0060 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 57948 - 57837
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagnnnnnnncat 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||       |||    
T  57948 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagacgaaaatgtggcgtgtttggtaacaagcttttttcat 57849  T
Q  248 gagcttatagcg 259  Q
    ||||||||||||    
T  57848 gagcttatagcg 57837  T

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Target: scaffold0330 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 6991 - 7079
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||||||||||||||||| |||||  |||||| ||||||||||||  |||||||||||||||||| |||||||||||||||    
T  6991 tgtgtttggtaacacaaaaaagctagcttatagtttgttgaattagcttataaattcgttagatgaaaacgtggcgtgtttggtaacaa 7079  T

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Target: scaffold0007 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 157716 - 157629
Alignment:
Q  146 gttgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaa 233  Q
    |||||||||||||||| ||| ||||||| |||||  ||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  157716 gttgtgtttggtaacataaataagctagcttatagtttgttagattagcttataagctcgttggatgaaaatgtgacgtgtttggtaa 157629  T

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Target: scaffold0115 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 4149 - 4204
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  4149 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 4204  T

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Target: scaffold0115; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 11889 - 11944
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 203  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  11889 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 11944  T

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Target: scaffold1391 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 1592 - 1506
Alignment:
Q  150 tgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaa 236  Q
    |||||||||||| ||| ||||||  |||||  |||||| | ||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  1592 tgtttggtaacataaataagctatcttatagtttgttgaactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaa 1506  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 76244 - 76296
Alignment:
Q  148 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataa 200  Q
    |||||||||||||| ||||||| ||| |||||  |||||||| ||||||||||    
T  76244 tgtgtttggtaacataaaaaaggtagcttatagtttgttggactagcttataa 76296  T

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