View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1717-Insertion-2 (Length: 812)

Name: NF1717-Insertion-2
Description: NF1717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1717-Insertion-2
NF1717-Insertion-2
[»] chr5 (3 HSPs)
chr5 (207-812)||(2397718-2398323)
chr5 (208-255)||(14209892-14209939)
chr5 (208-282)||(43378571-43378645)
[»] chr8 (8 HSPs)
chr8 (233-795)||(28583716-28584264)
chr8 (209-533)||(20168748-20169082)
chr8 (206-282)||(42578706-42578782)
chr8 (209-282)||(6461880-6461953)
chr8 (209-308)||(40030500-40030599)
chr8 (208-282)||(6462611-6462685)
chr8 (347-384)||(9391849-9391886)
chr8 (207-308)||(13017753-13017854)
[»] chr2 (10 HSPs)
chr2 (8-197)||(39937729-39937917)
chr2 (209-578)||(38823220-38823584)
chr2 (209-308)||(4855309-4855408)
chr2 (209-308)||(3467313-3467412)
chr2 (209-274)||(4854473-4854538)
chr2 (216-282)||(39064584-39064650)
chr2 (209-282)||(34173855-34173928)
chr2 (234-274)||(3466631-3466671)
chr2 (208-282)||(39063804-39063878)
chr2 (208-253)||(40321187-40321232)
[»] chr7 (10 HSPs)
chr7 (209-578)||(26582315-26582693)
chr7 (209-533)||(44390457-44390791)
chr7 (209-308)||(25674893-25674992)
chr7 (207-278)||(25675746-25675817)
chr7 (207-298)||(48627761-48627852)
chr7 (204-301)||(41347807-41347904)
chr7 (215-288)||(46295637-46295710)
chr7 (241-308)||(16980503-16980570)
chr7 (209-279)||(26581975-26582045)
chr7 (209-282)||(25442216-25442289)
[»] chr4 (4 HSPs)
chr4 (273-535)||(44095729-44096002)
chr4 (207-282)||(44095302-44095377)
chr4 (204-273)||(31414071-31414140)
chr4 (209-282)||(31414843-31414916)
[»] scaffold0098 (1 HSPs)
scaffold0098 (209-333)||(52264-52388)
[»] chr3 (6 HSPs)
chr3 (206-301)||(40613052-40613147)
chr3 (208-278)||(34328387-34328457)
chr3 (201-282)||(37886646-37886727)
chr3 (208-282)||(44636975-44637051)
chr3 (208-253)||(44637789-44637834)
chr3 (209-282)||(55444576-55444649)
[»] chr1 (3 HSPs)
chr1 (209-308)||(41459408-41459507)
chr1 (201-278)||(7338798-7338875)
chr1 (205-282)||(15668275-15668352)
[»] scaffold0330 (2 HSPs)
scaffold0330 (214-282)||(13237-13305)
scaffold0330 (207-282)||(12515-12590)
[»] chr6 (2 HSPs)
chr6 (209-277)||(34262186-34262254)
chr6 (237-282)||(3163517-3163562)


Alignment Details
Target: chr5 (Bit Score: 503; Significance: 0; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 207 - 812
Target Start/End: Complemental strand, 2398323 - 2397718
Alignment:
Q  207 atgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaa 306  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||  |||||||||||||| |||||||    
T  2398323 atgagttcatctttgctccatttttgtttgcttcatttactc-tttttagtttacagatgtgtgacatgtggtaaaatcaaatctaaaggctgagattaa 2398225  T
Q  307 aaaacatcatcacatgctttctccactcttggtcacctgatccctttctcctccacctccttcattcccctttcaatttcccagtttcattgcaaaatcc 406  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2398224 aagacatcatcacatgctttcttcactcttggtcacctgatccctttctcctccacctccttcattcccctttcaattttccagtttcattgcaaaatcc 2398125  T
Q  407 ataaccacaattttgacgagattagtcataacataggatctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaagggattgaa 506  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2398124 ataaccataattttgacgagattaatcataacgtaggatctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaagggattgaa 2398025  T
Q  507 tgaattttaaattgacaatcctcttaatcctttaggttaa-aaaacgaggcttaagggatgaaaaacaacacctttgaggctgatttaaaccatgaaaaa 605  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2398024 tgaattttaaattgacaatcctcttaatcctttaggttaaaaaaacgagtcttaagggatgaaaaacaacacctttgaagctgatttaaaccatgaaaaa 2397925  T
Q  606 gaaaatataagattttgatgttttggatttcgattcttaaaacagtgtttcgaaaattccttataagtttgttatttttgatgaactggatagcaccgcc 705  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  2397924 gaaaatacaagattttgatgttttggatttcgattcttaaaacagtgtttcgaaaattccttataagtttgttatttttgatgaactcgatagcgccgcc 2397825  T
Q  706 gatggatggaggcagagatgcggcgtcggcagcgccggcgagagggagagggagatacagcagtgattttgagaagaggaagaagcaaggcacgtgttgt 805  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  2397824 ggtggatggtggcagagatgcggcgtcggcagcgccggcgagagggagagggagatgcagcagtgattttgagaagaggaagaaggaaggcgcgtgttgt 2397725  T
Q  806 tgtatca 812  Q
    |||||||    
T  2397724 tgtatca 2397718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 14209939 - 14209892
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactccttttta 255  Q
    |||||||||||||||||||||||  ||  |||||||||||||||||||    
T  14209939 tgagttcatctttgctccattttgcttaactccatttactccttttta 14209892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 43378571 - 43378645
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||||||||||||||||||||| ||   ||||||||||| || || ||| |  ||||||||||||| ||||||||    
T  43378571 tgagttcatctttgctccatttatgaaggctccatttaccccattctagctcttagatgtgtgacacgtggcaaa 43378645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 376; Significance: 0; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 233 - 795
Target Start/End: Original strand, 28583716 - 28584264
Alignment:
Q  233 tttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaaaacatcatcacatgctttctccac 332  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||  |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  28583716 tttgctccatttactcctttttagtttacatatgtgtgacatgtggcaaaatcaaatctaaaggctgagattaaaagacatcatcacatgctttctccac 28583815  T
Q  333 tcttggtcacctgatccctttctcctccacctccttcattcccctttcaatttcccagtttcattgcaaaatccataaccacaattttgacgagattagt 432  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  28583816 tcttgatcacctgatccctttctcctccacctccttcattcccctttcaatttcc-agtttcattgcaaaatccataaccacaattttgacgagattaat 28583914  T
Q  433 cataacataggatctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaagggattgaatgaattttaaattgacaatcctctta 532  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28583915 cataacataggatctttctaaaattgaagaaaaaattaattaattaaaattagaatcacaacaaagggattgaatgaattttaaattgacaatcctctta 28584014  T
Q  533 atcctttaggttaaaaaacgaggcttaagggatgaaaaacaacacctttgaggctgatttaaaccatgaaaaagaaaatataagattttgatgttttgga 632  Q
    ||||||||||||||||||  | |    || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  28584015 atcctttaggttaaaaaa--acg----agtgatgaaaaacaacacctttgaggctggtttaaaccatgaaaaagaaaatacaagattttgatgttttgga 28584108  T
Q  633 tttcgattcttaaaacagtgtttcgaaaattccttata--------agtttgttatttttgatgaactggatagcaccgccgatggatggaggcagagat 724  Q
    |||||||||||||||||||||||||||||  |||||||        |||||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  28584109 tttcgattcttaaaacagtgtttcgaaaacaccttataagtttgttagtttgttatttttgatgaactcgatagcgccgccggtggatggaggcagagat 28584208  T
Q  725 gcggcgtcggcagcgccggcgagagggagagggagatacagcagtgattttgagaagaggaagaagcaagg 795  Q
    |||||||||||               ||||||||||| |||||||||||||||||||||||||||| ||||    
T  28584209 gcggcgtcggc---------------gagagggagatgcagcagtgattttgagaagaggaagaaggaagg 28584264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 209 - 533
Target Start/End: Complemental strand, 20169082 - 20168748
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    |||| |||||||||||||||| || |||||||||||||||||||||| || | |||| |||||||||||||||| | ||||||||||||||  |||||||    
T  20169082 gagtgcatctttgctccatttatgattgctccatttactcctttttaattcacagatatgtgacatgtggcaaaaa-aaatctaaaggctacaattaaaa 20168984  T
Q  309 aacatcatcacatgctttctccactcttggtcacctgatccctttctcctccacctccttcattcccctttcaatttcccagtttcattgcaaaatccat 408  Q
     |||||||||| |||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  20168983 gacatcatcacgtgctttcttcactctatgtcacctgatccctttctcctctacctccttcattcccctttcaatttcccaatttcattgcaaaatctat 20168884  T
Q  409 aac--caca-----attttgacgagattagtca----taacataggatctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaa 497  Q
     ||   |||     ||||||| ||||||| | |     ||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20168883 cacagtacatgaacattttgatgagattaattaattgaaacagtgagtctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaa 20168784  T
Q  498 gggattgaa-tgaattttaaattgacaatcctcttaa 533  Q
     |||||||| ||| |||||||||||||||||| ||||    
T  20168783 -ggattgaattgatttttaaattgacaatcctgttaa 20168748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 42578706 - 42578782
Alignment:
Q  206 tatgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    ||||||| |||||||||||||||| ||||||||| |||||| || ||| |  | |||||||| ||||||||||||||    
T  42578706 tatgagtccatctttgctccatttatgtttgctcaatttaccccatttcaagtcatagatgtatgacatgtggcaaa 42578782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 6461880 - 6461953
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||||||||||||||||||||  |||||||| ||||| | | ||| |  |||||||||| ||||||||||||||    
T  6461880 gagttcatctttgctccatttcggtttgctcaatttatttcatttcaagttatagatgtatgacatgtggcaaa 6461953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 40030599 - 40030500
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    |||||||||||||||||||||    |||||| ||||| ||||||| | |  ||||||||||||||  || |||| | ||||| ||||||| |||||||||    
T  40030599 gagttcatctttgctccatttactcttgctcaatttattccttttcaatgcatagatgtgtgacacttgacaaaaataaatccaaaggctgagattaaaa 40030500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 6462685 - 6462611
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    ||||| |||||||||||||||| ||||||||| |||||| || ||| |  |  ||||||| ||||||||||||||    
T  6462685 tgagtccatctttgctccatttatgtttgctcaatttaccccatttcaagtcctagatgtatgacatgtggcaaa 6462611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 384
Target Start/End: Original strand, 9391849 - 9391886
Alignment:
Q  347 tccctttctcctccacctccttcattcccctttcaatt 384  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  9391849 tccctttctcctccacctttttcattcccctttcaatt 9391886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 13017854 - 13017753
Alignment:
Q  207 atgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaa 306  Q
    |||||| |||||||||||||||| ||   ||||||||||| ||| || | |  |||||| | |||||||||||||| |||||   ||||||| |||||||    
T  13017854 atgagtgcatctttgctccatttatgagagctccatttacacctgttcactgcatagatttatgacatgtggcaaaaacaaaatcaaaggctcagattaa 13017755  T
Q  307 aa 308  Q
    ||    
T  13017754 aa 13017753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 3e-87; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 39937917 - 39937729
Alignment:
Q  8 atatatgtgtccttgaacaggcttattgcatcaaattaaactttacaatatagtttaatttaaatgaataagtgcaaggttttatnnnnnnnggtacgca 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||    
T  39937917 atatatgtgtccttgaacaggcttattgcatcaaattaaactttacaatatagtttaatttaaatgaataagtgcaaggttttataaaaaa-ggtacgca 39937819  T
Q  108 atcgtgatctagatcccgataccaaggtttttgatgttaatgtgactgcaattgacgttgcactatcatatttgactacgattttccata 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39937818 atcgtgatctagatcccgataccaaggtttttgatgttaatgtgactgcaattgacgttgcactatcatatttgactacgattttccata 39937729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 209 - 578
Target Start/End: Original strand, 38823220 - 38823584
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| | |||| ||||||||||||||||| ||| | |||| ||||| | ||||||||||    
T  38823220 gagttcatctttgctccatttatatttgctccatttactccttttgaatttacagatgtgtgacatgtggaaaaaataaatgtaaagacaaagattaaaa 38823319  T
Q  309 aacatcatcacatgctttctccactcttggtcacctgatccctttctcctccacctccttcattcccctttcaatttcccagtttcattgcaaaatccat 408  Q
     |||||||  |||||| |||||||||| |||||||| ||| |||||||||||||||||||||             |||||| ||||||||| ||||||||    
T  38823320 gacatcattgcatgctctctccactctcggtcacctaatctctttctcctccacctccttca-------------ttcccaatttcattgc-aaatccat 38823405  T
Q  409 aacc------acaattttgacgagattagtca--taaca--taggatctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaag 498  Q
    ||||      |||||||||| ||||||| | |  |||||   ||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||      
T  38823406 aaccacatgaacaattttgatgagattaattaattaacactgagagtctttctaaaattgaagaacaaattaattagataaaattagaatcacaacaagt 38823505  T
Q  499 ggattgaatgaattttaaattgacaatcctcttaatcctttaggttaaaaaacgaggcttaagggatgaaaaacaacacc 578  Q
    ||||| |||| |||||||||| |||||||| ||||||| |||| |||||||| ||  |||||||||||||||||||||||    
T  38823506 ggattaaatggattttaaattaacaatccttttaatcc-ttagattaaaaaatgattcttaagggatgaaaaacaacacc 38823584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 4855408 - 4855309
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| | | ||||||||||||||| |||| | | ||||||  |||||||| ||||||||    
T  4855408 gagttcatctttgctccatttatgtttgctcaatttactccttttcaatgtatagatgtgtgacacgtggaacaaacaaattcaaaggctatgattaaaa 4855309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 3467412 - 3467313
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    |||| |||||||||||||||||   |||||||||||||||||||||| || ||||||||||||||| |||||||   |||||||| || | |||||||||    
T  3467412 gagtgcatctttgctccattttgacttgctccatttactcctttttacttcatagatgtgtgacatatggcaaaactaaatctaagggttgagattaaaa 3467313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 4854473 - 4854538
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacat 274  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||| | | ||||||||||||||||    
T  4854473 gagttcatctttgctccatttatgttgactccatttactccttttcaatgtatagatgtgtgacat 4854538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 39064650 - 39064584
Alignment:
Q  216 tctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||||||||||||| ||||| ||| ||||| ||||||| | ||||| ||||||||||||||||||||    
T  39064650 tctttgctccatttatgtttcctcaatttattccttttcattttattgatgtgtgacatgtggcaaa 39064584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 34173928 - 34173855
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||| |||||||||||| |||| |||| ||| ||||| ||||||| | ||||| ||||||||||||||| ||||    
T  34173928 gagtccatctttgctcccttttggttttctcaatttattccttttcattttattgatgtgtgacatgtgacaaa 34173855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 3466631 - 3466671
Alignment:
Q  234 ttgctccatttactcctttttagtttatagatgtgtgacat 274  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  3466631 ttgctccatttactcctttttacttcatagatgtgtgacat 3466671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 39063804 - 39063878
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    ||||| ||||||||||||||||  |||| ||| ||||| || |||| | ||||| ||||| ||||||||||||||    
T  39063804 tgagtccatctttgctccatttaggtttcctcaatttattcattttcactttattgatgtatgacatgtggcaaa 39063878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 40321232 - 40321187
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactcctttt 253  Q
    ||||||||||||||||||||||    ||||||||||||||||||||    
T  40321232 tgagttcatctttgctccatttagccttgctccatttactcctttt 40321187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 7e-76; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 209 - 578
Target Start/End: Complemental strand, 26582693 - 26582315
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    |||||||||||| |||||||| | ||||||||||||||||||||| | |||| ||||||||||||| ||||||| | |||||||||| |  ||||| |||    
T  26582693 gagttcatctttactccatttatatttgctccatttactccttttaaatttacagatgtgtgacatatggcaaaaataaatctaaagacagagatttaaa 26582594  T
Q  309 a-acatcatcacatgctttctccactcttggtcacctgatccctttctcctccacctccttcattcccctttcaatttcccagtttcattgcaaaatcca 407  Q
    | |||||||  |||||| |||||||||| |||||||| ||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||||    
T  26582593 agacatcattgcatgctctctccactctcggtcacctaatctctttctcctccacctccttcattctcctctcaatttcccaatttcattgc-aaatcca 26582495  T
Q  408 taac------cacaattttgacgag----attagtcataacataggatctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaa 497  Q
    ||||       |||||||||| |||    |||| | | |||  ||  |||||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  26582494 taacaacttgaacaattttgatgagattaattaattaaaactgagagtctttctaaaattgaagaacgaattaattagataaaattagaatcacaacaaa 26582395  T
Q  498 gggattgaatgaattttaaattgacaatcctcttaatcctttaggttaaaaaacgaggcttaagggatgaaaaacaacacc 578  Q
     ||||| |||| |||||||||| |||||||| ||||||| |||| |||||||| ||  |||||||||||||||||||||||    
T  26582394 tggattaaatggattttaaattaacaatccttttaatcc-ttagattaaaaaatgattcttaagggatgaaaaacaacacc 26582315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 209 - 533
Target Start/End: Complemental strand, 44390791 - 44390457
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    |||| |||||||||||||||| || |||||||||||||||||||||| || | |||| |||||||||||||||| | ||||||||||||||  |||||||    
T  44390791 gagtgcatctttgctccatttatgattgctccatttactcctttttaattcacagatatgtgacatgtggcaaaaa-aaatctaaaggctacaattaaaa 44390693  T
Q  309 aacatcatcacatgctttctccactcttggtcacctgatccctttctcctccacctccttcattcccctttcaatttcccagtttcattgcaaaatccat 408  Q
     |||||||||| |||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  44390692 gacatcatcacgtgctttcttcactctatgtcacctgatccctttctcctctacctccttcattcccctttcaatttcccaatttcattgcaaaatctat 44390593  T
Q  409 aac--caca-----attttgacgagattagtca----taacataggatctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaa 497  Q
     ||   |||     ||||||| ||||||| | |     ||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44390592 cacagtacatgaacattttgatgagattaattaattgaaacagtgagtctttctaaaattgaagaacaaattaattaattaaaattagaatcacaacaaa 44390493  T
Q  498 gggattgaa-tgaattttaaattgacaatcctcttaa 533  Q
     |||||||| ||| |||||||||||||||||| ||||    
T  44390492 -ggattgaattgatttttaaattgacaatcctgttaa 44390457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 25674893 - 25674992
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| | | ||||||||||||||| |||| | | ||||||  |||||||| ||||||||    
T  25674893 gagttcatctttgctccatttgtgtttgctcaatttactccttttcaatgtatagatgtgtgacacgtggaacaaacaaattcaaaggctatgattaaaa 25674992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 25675817 - 25675746
Alignment:
Q  207 atgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtgg 278  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| | | ||||||||||||||||||||    
T  25675817 atgagttcatctttgctccatttatgttggctccatttactccttttcaatgtatagatgtgtgacatgtgg 25675746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 298
Target Start/End: Original strand, 48627761 - 48627852
Alignment:
Q  207 atgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggct 298  Q
    |||||||||||||||||||||||    |||||||||||||||||||| | |  ||  |||| |||||||||| ||| |||||||||| ||||    
T  48627761 atgagttcatctttgctccatttaccattgctccatttactccttttgaatgcatgaatgtttgacatgtggaaaaaacaaatctaatggct 48627852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 41347904 - 41347807
Alignment:
Q  204 attatgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaag 301  Q
    |||||||||||||||||||| |||||    || ||||||||| ||||||| | | ||| ||||| |||||||||| ||| | |||||||| |||||||    
T  41347904 attatgagttcatctttgcttcatttaaccttactccatttaatccttttgaatgtatggatgtttgacatgtggaaaaaaaaaatctaatggctaag 41347807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 46295710 - 46295637
Alignment:
Q  215 atctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaa 288  Q
    ||||||||||||||| |   |||||||||||  |||||| | ||||||||||||||||||||||| || |||||    
T  46295710 atctttgctccatttatcaatgctccatttatcccttttcattttatagatgtgtgacatgtggctaaaacaaa 46295637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 16980503 - 16980570
Alignment:
Q  241 atttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    ||||||||||||| | |||| ||||||||||||| || |||| | ||| |||||||||| ||||||||    
T  16980503 atttactccttttcactttacagatgtgtgacatctgtcaaaaataaaactaaaggctaggattaaaa 16980570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 26581975 - 26582045
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggc 279  Q
    ||||| |||||||||||||||  || | || |||||||||||||||| | || |||| |||||||||||||    
T  26581975 gagtttatctttgctccatttaagtctccttcatttactcctttttaatgtacagatatgtgacatgtggc 26582045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 25442289 - 25442216
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||||||||| ||||||||||    ||||||||||||| ||| || ||  |||||||| |||||||||||||||    
T  25442289 gagttcatctatgctccatttacacttgctccatttacccctgttcagggtatagatgagtgacatgtggcaaa 25442216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 9e-63; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 273 - 535
Target Start/End: Complemental strand, 44096002 - 44095729
Alignment:
Q  273 atgtggcaaacacaaatctaaaggctaagattaaaaaacatcatcacatgctttctccactcttggtcacctgatccctttctcctccacctccttcatt 372  Q
    |||||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||| | ||||||  ||||| |||||||||||||||||||||||||||||    
T  44096002 atgtggtaaaaacaaatctaaaagctgagattaaaagacatcatcccatgcttttttcactctatgtcacttgatccctttctcctccacctccttcatt 44095903  T
Q  373 cccctttcaatttcccagtttcattgcaaaatccataaccaca-------attttgacgagattagtca----taacataggatctttctaaaattgaag 461  Q
    ||||||||||||||||| ||||||||||||||| |||||||||       ||||||| ||||||| | |     |||||   |||||||||||| |||||    
T  44095902 cccctttcaatttcccaatttcattgcaaaatctataaccacataaaatgattttgatgagattacttaattgaaacatgaaatctttctaaaactgaag 44095803  T
Q  462 aacaaattaattaattaaaattagaatcacaacaaagggattgaatgaattttaaattgacaatcctcttaatc 535  Q
    || |||||||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  44095802 aagaaattaattaattaaaattgaaattgcaacaaagggattgaatgaattttaaattgacaatcctgttaatc 44095729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 44095302 - 44095377
Alignment:
Q  207 atgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| | | |  |||||||||||||||| ||||    
T  44095302 atgagttcatctttgctccattttgatttcctccatttactccttttcaatgtgcagatgtgtgacatgtgtcaaa 44095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 31414071 - 31414140
Alignment:
Q  204 attatgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgaca 273  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||| |||| | |  ||||||||||||||    
T  31414071 attaggagttcatctttgctccatttatgtttgctccatttgctcattttcaatgcatagatgtgtgaca 31414140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 31414916 - 31414843
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||| ||||||||||||||||  |||| ||| ||||| ||||||| | ||||| ||| ||||||||||||||||    
T  31414916 gagtccatctttgctccatttaagtttcctcaatttattccttttcactttattgatatgtgacatgtggcaaa 31414843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 209 - 333
Target Start/End: Original strand, 52264 - 52388
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |  ||||||||||||||||||  ||| ||||||| || || | |||||||||    
T  52264 gagttcatctttgctccatttttgtttcctccatttactccttttcaatgcatagatgtgtgacatgtgttaaaaacaaatccaatggttgagattaaaa 52363  T
Q  309 aacatcatcacatgctttctccact 333  Q
        ||| |||||||| ||||||||    
T  52364 tgtctcaccacatgctctctccact 52388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 301
Target Start/End: Original strand, 40613052 - 40613147
Alignment:
Q  206 tatgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaag 301  Q
    ||||||||||||||||||||||||    || ||||||||| ||||||| | |  |||||||| |||||||||| ||| |||||||||| |||||||    
T  40613052 tatgagttcatctttgctccatttaaccttactccatttaatccttttgaatgcatagatgtttgacatgtggaaaaaacaaatctaatggctaag 40613147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 34328387 - 34328457
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtgg 278  Q
    |||||||||||||| |||||||  |||||||||||||||||| |||    | |||||||||||||||||||    
T  34328387 tgagttcatctttgttccatttaggtttgctccatttactccgtttaccataatagatgtgtgacatgtgg 34328457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 37886646 - 37886727
Alignment:
Q  201 aaaattatgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    ||||| |||||| ||| |||||| |||||  |||| ||| ||||| ||||||| | ||||| ||||||||||||||||||||    
T  37886646 aaaataatgagtccatttttgcttcatttaggtttcctcaatttattccttttcactttattgatgtgtgacatgtggcaaa 37886727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 44636975 - 44637051
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatag--atgtgtgacatgtggcaaa 282  Q
    |||||||||||||||||||||||  ||| ||| ||||||||||||||| |  ||||  |||||||||| ||||||||    
T  44636975 tgagttcatctttgctccattttactttactctatttactcctttttaatgcatagatatgtgtgacacgtggcaaa 44637051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 44637834 - 44637789
Alignment:
Q  208 tgagttcatctttgctccatttttgtttgctccatttactcctttt 253  Q
    |||||||||||||||||||| |  || |||||||||||||||||||    
T  44637834 tgagttcatctttgctccatctaagtatgctccatttactcctttt 44637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 55444649 - 55444576
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||| |||||||||| |||||  |  |||||||||||  |||||| | ||||| ||||||||||||||||||||    
T  55444649 gagtccatctttgcttcatttaagaatgctccatttatcccttttcactttattgatgtgtgacatgtggcaaa 55444576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 41459507 - 41459408
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaacacaaatctaaaggctaagattaaaa 308  Q
    ||||||||||||||||||||| |||||| || |||||||| |||| | |  |||||||||||||| |||| | | ||||||| |||| ||| ||||||||    
T  41459507 gagttcatctttgctccatttatgtttgttcaatttactcattttcaatacatagatgtgtgacacgtggaacaaacaaatccaaagactatgattaaaa 41459408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 7338875 - 7338798
Alignment:
Q  201 aaaattatgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtgg 278  Q
    |||| ||||||| |||||||||||||||| ||||| ||| ||||||||| ||| |  | |||||||||| ||||||||    
T  7338875 aaaaatatgagtccatctttgctccatttatgtttcctcaatttactccatttcaagtcatagatgtgtaacatgtgg 7338798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 15668352 - 15668275
Alignment:
Q  205 ttatgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||||||| ||||||||||||||||  |   |||||||||||||||||| | | | | ||||||||||||||||||||    
T  15668352 ttatgagtccatctttgctccatttaagaaggctccatttactccttttcactgtttggatgtgtgacatgtggcaaa 15668275  T

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Target: scaffold0330 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 13305 - 13237
Alignment:
Q  214 catctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    ||||||||||||||||  |||| ||| ||||| ||||||| | ||||| ||||||||||||||||||||    
T  13305 catctttgctccatttaggtttcctcaatttattccttttcactttattgatgtgtgacatgtggcaaa 13237  T

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Target: scaffold0330; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 12515 - 12590
Alignment:
Q  207 atgagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||||||||||||||||| ||||  |||| ||| ||||| ||||||| | ||||| | ||||||||||||||||||    
T  12515 atgagttcatctttgctctatttaagtttcctcaatttattccttttcactttattgttgtgtgacatgtggcaaa 12590  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 34262254 - 34262186
Alignment:
Q  209 gagttcatctttgctccatttttgtttgctccatttactcctttttagtttatagatgtgtgacatgtg 277  Q
    ||||||||||||||||||||||  ||| ||| |||||| || |||||  |||| |||||||||||||||    
T  34262254 gagttcatctttgctccattttcctttcctcaatttaccccattttaagttatggatgtgtgacatgtg 34262186  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 3163517 - 3163562
Alignment:
Q  237 ctccatttactcctttttagtttatagatgtgtgacatgtggcaaa 282  Q
    |||||||||| |||||| |||||||||||||| |||||||| ||||    
T  3163517 ctccatttaccccttttcagtttatagatgtgcgacatgtgtcaaa 3163562  T

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