View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1717-Insertion-22 (Length: 220)
Name: NF1717-Insertion-22
Description: NF1717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1717-Insertion-22 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 38293012 - 38293225
Alignment:
| Q |
7 |
actgatcaatgcagaaccaaatgaatttagagtaagagaggttaattaatatactgagtgccgggaatgaaaacgtcagaatttgaagctacgcagtgct |
106 |
Q |
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| T |
38293012 |
actgatcaatgcagaaccaaatgaatttagagtaagagaggttaattaatatactgagtgccaggaatgaaaacgtcggaatttgaagctacgcagtgct |
38293111 |
T |
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| Q |
107 |
tatgaagctgtgtttgtgcatcaaaagcttctcttccatgaacaaagctggtaccaaaggcagtgtgggcaattatatttgctgttagctctcgaaattc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38293112 |
tatgaagctgtgtttgtgcatcaaaagcttctcttccatgaacaaagctggtaccaaaggcagtgtgggcaattatatttgctgttagctctcgaaattc |
38293211 |
T |
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| Q |
207 |
ttcagtcatctcta |
220 |
Q |
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|||||||||||||| |
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| T |
38293212 |
ttcagtcatctcta |
38293225 |
T |
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