View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17172_high_5 (Length: 357)
Name: NF17172_high_5
Description: NF17172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17172_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 34095608 - 34095881
Alignment:
| Q |
19 |
taaagagctctcttcaatgccaaatcttcttcactctcaaccttttgatctttgcctcaaggtataatatatttaatttaatcaatgtcatttactttaa |
118 |
Q |
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| T |
34095608 |
taaagagctctcttcaatgccaaatcttcatcactctcaaccttttgatctttgcctcaaggtataatatatttaatttaatcaatgtcatttactttaa |
34095707 |
T |
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| Q |
119 |
tcctttttgttttaaacgtgtttaagtttatttcatgacattgattcatgattagatcatggagattattaatttaacatcttt------ttgatgtaca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |
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| T |
34095708 |
tcctttttgttttaaacgtgtttaagtttatttcatgacattgattcatgattagatcatggagattattaatttaacattttttttttgtttatgtaca |
34095807 |
T |
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| Q |
213 |
tcaaattttatgataaagttagctccttaatcttgtaattaaaaatgttattcatgttctcttacgtttagtta |
286 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34095808 |
tcaaattttatgatgaagttagctccttaatcttgtaattaaaaatgttattcatgttctcttacgtttagtta |
34095881 |
T |
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