View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17172_low_1 (Length: 634)

Name: NF17172_low_1
Description: NF17172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17172_low_1
NF17172_low_1
[»] scaffold0018 (2 HSPs)
scaffold0018 (20-468)||(173235-173680)
scaffold0018 (526-579)||(173738-173790)
[»] chr1 (43 HSPs)
chr1 (290-394)||(38547041-38547145)
chr1 (289-394)||(39134726-39134832)
chr1 (289-394)||(45758498-45758603)
chr1 (290-386)||(5316692-5316788)
chr1 (290-386)||(23185439-23185535)
chr1 (284-386)||(9173022-9173124)
chr1 (284-386)||(9181004-9181106)
chr1 (289-394)||(6221682-6221786)
chr1 (290-386)||(4971623-4971719)
chr1 (292-388)||(6771801-6771897)
chr1 (290-386)||(27559649-27559745)
chr1 (292-386)||(14146312-14146406)
chr1 (291-394)||(43235774-43235879)
chr1 (290-386)||(1366883-1366979)
chr1 (290-386)||(5027561-5027657)
chr1 (290-386)||(44655753-44655849)
chr1 (289-394)||(26803952-26804054)
chr1 (284-403)||(33170754-33170873)
chr1 (290-386)||(17168968-17169064)
chr1 (290-386)||(19955729-19955825)
chr1 (290-377)||(21740942-21741029)
chr1 (291-385)||(51607445-51607540)
chr1 (292-386)||(3406430-3406524)
chr1 (292-386)||(3440296-3440390)
chr1 (289-394)||(5533316-5533422)
chr1 (293-395)||(38853526-38853627)
chr1 (290-388)||(50881440-50881538)
chr1 (291-388)||(40501796-40501893)
chr1 (292-384)||(16140069-16140161)
chr1 (289-391)||(10925957-10926060)
chr1 (289-387)||(50146307-50146405)
chr1 (292-386)||(41697144-41697238)
chr1 (290-386)||(13913485-13913583)
chr1 (291-373)||(35392295-35392376)
chr1 (290-363)||(6889646-6889719)
chr1 (290-363)||(6891492-6891565)
chr1 (290-363)||(22865466-22865538)
chr1 (418-468)||(43235889-43235939)
chr1 (526-578)||(10926171-10926223)
chr1 (290-333)||(27906734-27906777)
chr1 (289-343)||(17322627-17322681)
chr1 (526-571)||(39134950-39134995)
chr1 (418-466)||(39134842-39134890)
[»] scaffold1590 (1 HSPs)
scaffold1590 (289-394)||(263-368)
[»] scaffold0097 (1 HSPs)
scaffold0097 (289-394)||(38918-39023)
[»] chr8 (39 HSPs)
chr8 (289-394)||(15167420-15167525)
chr8 (291-394)||(15078751-15078854)
chr8 (289-394)||(7944527-7944632)
chr8 (291-394)||(25561502-25561603)
chr8 (291-393)||(8102906-8103008)
chr8 (290-386)||(23798267-23798363)
chr8 (290-386)||(45475818-45475914)
chr8 (289-392)||(8646201-8646303)
chr8 (292-394)||(5721552-5721654)
chr8 (289-394)||(41677178-41677284)
chr8 (289-394)||(11290177-11290282)
chr8 (289-394)||(39332410-39332515)
chr8 (290-386)||(23606635-23606731)
chr8 (290-386)||(30883330-30883426)
chr8 (284-386)||(10917392-10917494)
chr8 (289-394)||(5973112-5973217)
chr8 (289-394)||(23941096-23941201)
chr8 (290-386)||(2952227-2952323)
chr8 (290-386)||(5860750-5860846)
chr8 (306-394)||(5942689-5942777)
chr8 (290-386)||(13534693-13534788)
chr8 (290-386)||(13624233-13624328)
chr8 (290-386)||(42600783-42600879)
chr8 (292-386)||(37430166-37430260)
chr8 (289-386)||(41879182-41879279)
chr8 (289-394)||(14509988-14510092)
chr8 (289-366)||(30674408-30674485)
chr8 (292-394)||(34789870-34789972)
chr8 (297-386)||(3048530-3048619)
chr8 (289-394)||(34048710-34048817)
chr8 (528-577)||(8646024-8646073)
chr8 (289-329)||(9108551-9108591)
chr8 (291-330)||(34868184-34868223)
chr8 (418-468)||(8102847-8102897)
chr8 (529-577)||(34048938-34048986)
chr8 (431-468)||(15167546-15167583)
chr8 (431-468)||(25561639-25561676)
chr8 (526-578)||(15078583-15078635)
chr8 (526-578)||(15167641-15167693)
[»] scaffold1320 (2 HSPs)
scaffold1320 (291-394)||(1347-1450)
scaffold1320 (526-578)||(1179-1231)
[»] chr6 (27 HSPs)
chr6 (289-394)||(2477589-2477694)
chr6 (291-386)||(33774121-33774216)
chr6 (290-386)||(28075787-28075883)
chr6 (290-386)||(13727405-13727501)
chr6 (290-386)||(17353958-17354054)
chr6 (290-386)||(20711726-20711822)
chr6 (290-386)||(21479498-21479594)
chr6 (291-392)||(20611788-20611889)
chr6 (290-386)||(27788694-27788790)
chr6 (295-394)||(21183686-21183785)
chr6 (290-385)||(21280550-21280645)
chr6 (290-388)||(34397859-34397957)
chr6 (290-386)||(19737698-19737794)
chr6 (292-386)||(24711007-24711101)
chr6 (289-394)||(6159434-6159539)
chr6 (289-368)||(30121784-30121863)
chr6 (290-382)||(1155855-1155947)
chr6 (292-386)||(30832532-30832626)
chr6 (178-235)||(31094072-31094129)
chr6 (307-394)||(4036944-4037031)
chr6 (290-363)||(27314184-27314258)
chr6 (290-386)||(235230-235328)
chr6 (178-217)||(31051191-31051230)
chr6 (38-120)||(31093573-31093652)
chr6 (416-466)||(2477702-2477752)
chr6 (526-578)||(2477811-2477863)
chr6 (340-384)||(27994775-27994819)
[»] chr4 (59 HSPs)
chr4 (289-394)||(27112028-27112133)
chr4 (289-394)||(36118462-36118567)
chr4 (289-394)||(52468284-52468389)
chr4 (289-391)||(10042004-10042106)
chr4 (290-386)||(54780783-54780879)
chr4 (289-392)||(2135325-2135428)
chr4 (289-392)||(24396934-24397037)
chr4 (289-380)||(36178684-36178775)
chr4 (305-391)||(4167911-4167997)
chr4 (290-386)||(38209596-38209692)
chr4 (290-386)||(43455536-43455632)
chr4 (291-386)||(37777229-37777324)
chr4 (289-386)||(2790745-2790842)
chr4 (289-394)||(36362875-36362979)
chr4 (289-394)||(45656173-45656278)
chr4 (289-386)||(47128993-47129090)
chr4 (290-386)||(10978906-10979002)
chr4 (290-386)||(48209246-48209342)
chr4 (292-394)||(37744916-37745019)
chr4 (290-394)||(51691920-51692026)
chr4 (290-386)||(34027585-34027681)
chr4 (290-386)||(34768579-34768675)
chr4 (284-386)||(54083241-54083343)
chr4 (295-388)||(5128852-5128945)
chr4 (293-386)||(13460213-13460306)
chr4 (290-387)||(35779331-35779427)
chr4 (289-394)||(39329396-39329501)
chr4 (297-394)||(40217230-40217327)
chr4 (290-378)||(32128598-32128686)
chr4 (292-380)||(37514671-37514759)
chr4 (292-386)||(32915391-32915485)
chr4 (290-388)||(10428202-10428308)
chr4 (289-370)||(39655258-39655339)
chr4 (307-386)||(40089522-40089601)
chr4 (290-386)||(19498510-19498604)
chr4 (289-384)||(35465115-35465209)
chr4 (292-386)||(1105538-1105632)
chr4 (290-352)||(17679440-17679502)
chr4 (290-363)||(51964737-51964813)
chr4 (290-386)||(16845027-16845124)
chr4 (284-374)||(16882394-16882484)
chr4 (293-394)||(15735093-15735189)
chr4 (526-577)||(52468115-52468166)
chr4 (298-342)||(29425187-29425231)
chr4 (290-348)||(9578669-9578728)
chr4 (289-327)||(24614018-24614056)
chr4 (418-468)||(30507191-30507241)
chr4 (290-363)||(16922334-16922407)
chr4 (290-338)||(23508515-23508564)
chr4 (289-325)||(30507126-30507162)
chr4 (290-333)||(55255316-55255359)
chr4 (416-466)||(27111970-27112020)
chr4 (418-468)||(36118576-36118626)
chr4 (298-355)||(11906904-11906961)
chr4 (345-386)||(24969443-24969484)
chr4 (530-575)||(36178502-36178547)
chr4 (526-578)||(27111859-27111911)
chr4 (529-577)||(36118687-36118735)
chr4 (526-578)||(39329631-39329683)
[»] chr5 (55 HSPs)
chr5 (289-394)||(2412081-2412186)
chr5 (289-394)||(14318387-14318492)
chr5 (289-394)||(36868878-36868983)
chr5 (289-400)||(2024644-2024755)
chr5 (289-394)||(1366528-1366633)
chr5 (289-394)||(34425896-34426001)
chr5 (290-386)||(9364292-9364388)
chr5 (290-386)||(16198797-16198893)
chr5 (290-386)||(30854330-30854426)
chr5 (290-386)||(34756369-34756465)
chr5 (284-394)||(2530894-2531004)
chr5 (290-386)||(27079012-27079108)
chr5 (290-386)||(28822345-28822441)
chr5 (292-388)||(36187884-36187980)
chr5 (291-386)||(16799331-16799426)
chr5 (293-386)||(19523200-19523293)
chr5 (291-383)||(26718953-26719045)
chr5 (291-383)||(26988697-26988789)
chr5 (290-386)||(38869366-38869462)
chr5 (289-391)||(41911619-41911721)
chr5 (289-394)||(11242320-11242425)
chr5 (289-394)||(33037773-33037878)
chr5 (289-394)||(40794329-40794434)
chr5 (290-386)||(23284065-23284161)
chr5 (290-382)||(31194615-31194706)
chr5 (291-394)||(10543667-10543769)
chr5 (291-394)||(24395732-24395835)
chr5 (292-386)||(15480094-15480188)
chr5 (306-394)||(15639636-15639724)
chr5 (290-386)||(16592077-16592173)
chr5 (297-385)||(27924084-27924172)
chr5 (290-386)||(40389539-40389635)
chr5 (292-386)||(2274891-2274985)
chr5 (290-363)||(7338023-7338096)
chr5 (290-382)||(7670929-7671022)
chr5 (289-394)||(22648738-22648843)
chr5 (290-386)||(22986561-22986657)
chr5 (289-394)||(10407454-10407559)
chr5 (290-382)||(31881437-31881528)
chr5 (289-330)||(606211-606252)
chr5 (289-394)||(17344949-17345054)
chr5 (529-578)||(2024868-2024917)
chr5 (431-468)||(34425836-34425873)
chr5 (526-577)||(2411913-2411964)
chr5 (529-576)||(26719124-26719171)
chr5 (529-576)||(26988868-26988915)
chr5 (529-580)||(34307362-34307413)
chr5 (526-580)||(606156-606210)
chr5 (289-327)||(27530543-27530581)
chr5 (418-468)||(40794442-40794492)
chr5 (431-468)||(2024770-2024807)
chr5 (533-578)||(15639277-15639322)
chr5 (431-468)||(15639579-15639616)
chr5 (289-326)||(22875003-22875040)
chr5 (528-580)||(40794552-40794604)
[»] chr2 (42 HSPs)
chr2 (289-394)||(38400790-38400895)
chr2 (289-403)||(21665705-21665819)
chr2 (289-394)||(12134045-12134150)
chr2 (289-394)||(16097000-16097105)
chr2 (289-394)||(24035550-24035655)
chr2 (284-386)||(24410437-24410539)
chr2 (289-391)||(13800549-13800652)
chr2 (289-390)||(28425715-28425816)
chr2 (290-386)||(3155217-3155313)
chr2 (290-386)||(4505894-4505990)
chr2 (290-386)||(6965007-6965103)
chr2 (290-386)||(29939868-29939964)
chr2 (289-386)||(9046029-9046127)
chr2 (289-394)||(11912762-11912867)
chr2 (290-386)||(10762571-10762667)
chr2 (317-391)||(37182665-37182739)
chr2 (289-394)||(16227373-16227478)
chr2 (290-386)||(26716128-26716225)
chr2 (290-386)||(12337454-12337550)
chr2 (291-386)||(8907086-8907181)
chr2 (292-386)||(3953006-3953100)
chr2 (292-386)||(7162784-7162878)
chr2 (289-394)||(7742138-7742244)
chr2 (290-385)||(27506746-27506841)
chr2 (290-352)||(34694009-34694071)
chr2 (290-352)||(34716421-34716483)
chr2 (290-352)||(40636172-40636234)
chr2 (529-580)||(16227599-16227650)
chr2 (291-394)||(10252400-10252511)
chr2 (305-352)||(5952736-5952783)
chr2 (312-394)||(22727530-22727612)
chr2 (289-365)||(42029166-42029242)
chr2 (333-394)||(29694376-29694432)
chr2 (322-394)||(11952644-11952716)
chr2 (526-578)||(21665928-21665980)
chr2 (528-580)||(37182488-37182540)
chr2 (289-340)||(11952593-11952643)
chr2 (289-324)||(22727462-22727497)
chr2 (531-577)||(11952839-11952885)
chr2 (418-468)||(12134160-12134210)
chr2 (418-468)||(37622461-37622511)
chr2 (526-580)||(37622549-37622603)
[»] scaffold0012 (1 HSPs)
scaffold0012 (291-392)||(206496-206597)
[»] chr7 (47 HSPs)
chr7 (289-394)||(7398444-7398549)
chr7 (291-394)||(23859066-23859169)
chr7 (297-394)||(9021812-9021908)
chr7 (289-394)||(27237427-27237532)
chr7 (290-386)||(18776771-18776867)
chr7 (289-392)||(2611266-2611369)
chr7 (284-386)||(20091280-20091382)
chr7 (289-386)||(24525689-24525786)
chr7 (290-386)||(8171544-8171640)
chr7 (284-386)||(48983843-48983945)
chr7 (289-394)||(6765685-6765790)
chr7 (289-394)||(12419499-12419604)
chr7 (290-386)||(19692095-19692191)
chr7 (290-386)||(29077221-29077317)
chr7 (291-394)||(12981319-12981422)
chr7 (292-386)||(10955485-10955579)
chr7 (291-400)||(36891565-36891674)
chr7 (291-386)||(8239688-8239783)
chr7 (291-394)||(20153194-20153297)
chr7 (292-386)||(12596294-12596388)
chr7 (290-363)||(26254017-26254090)
chr7 (290-386)||(47984974-47985071)
chr7 (290-386)||(10329415-10329511)
chr7 (290-382)||(28749715-28749806)
chr7 (293-368)||(21763595-21763670)
chr7 (289-403)||(18201121-18201235)
chr7 (289-375)||(23744808-23744894)
chr7 (290-386)||(23551075-23551172)
chr7 (290-363)||(33162344-33162417)
chr7 (294-386)||(38414885-38414977)
chr7 (298-385)||(38971255-38971341)
chr7 (289-383)||(36902928-36903022)
chr7 (299-391)||(23020498-23020589)
chr7 (298-391)||(9014782-9014868)
chr7 (526-578)||(23858897-23858949)
chr7 (529-580)||(23020712-23020763)
chr7 (418-468)||(7398384-7398434)
chr7 (526-580)||(26917909-26917963)
chr7 (321-394)||(17800257-17800330)
chr7 (419-468)||(17800341-17800390)
chr7 (306-366)||(26917728-26917788)
chr7 (289-340)||(9014182-9014233)
chr7 (530-580)||(20153024-20153074)
chr7 (345-386)||(25010434-25010475)
chr7 (529-574)||(27237653-27237698)
chr7 (431-468)||(48983952-48983989)
chr7 (428-468)||(8239642-8239682)
[»] chr3 (38 HSPs)
chr3 (289-393)||(54574832-54574936)
chr3 (291-394)||(8420322-8420425)
chr3 (292-386)||(47467688-47467782)
chr3 (290-386)||(54619209-54619305)
chr3 (291-386)||(8073345-8073440)
chr3 (284-386)||(34290636-34290738)
chr3 (289-386)||(21582775-21582872)
chr3 (291-386)||(44708481-44708576)
chr3 (284-386)||(53506884-53506986)
chr3 (289-386)||(3953901-3953998)
chr3 (291-392)||(28689368-28689469)
chr3 (291-392)||(32319162-32319263)
chr3 (284-385)||(37168372-37168473)
chr3 (290-386)||(9878693-9878789)
chr3 (289-394)||(26279536-26279643)
chr3 (290-384)||(38681099-38681193)
chr3 (292-386)||(42098805-42098899)
chr3 (284-378)||(54407158-54407252)
chr3 (290-386)||(27078575-27078671)
chr3 (290-386)||(27084372-27084468)
chr3 (290-386)||(43207244-43207339)
chr3 (292-386)||(53149322-53149416)
chr3 (289-394)||(789932-790037)
chr3 (289-394)||(25855418-25855522)
chr3 (290-362)||(36716031-36716103)
chr3 (290-386)||(50939239-50939335)
chr3 (289-394)||(42453407-42453505)
chr3 (289-391)||(49393090-49393190)
chr3 (290-382)||(36605973-36606065)
chr3 (289-394)||(52374652-52374757)
chr3 (292-386)||(50258631-50258726)
chr3 (290-384)||(18372485-18372583)
chr3 (317-394)||(29598103-29598179)
chr3 (319-386)||(29620423-29620490)
chr3 (418-468)||(42453348-42453398)
chr3 (295-348)||(23641329-23641382)
chr3 (431-468)||(52374594-52374631)
chr3 (531-578)||(26279366-26279413)
[»] scaffold0182 (1 HSPs)
scaffold0182 (289-394)||(23998-24103)
[»] scaffold0039 (1 HSPs)
scaffold0039 (289-386)||(106539-106636)
[»] scaffold0007 (1 HSPs)
scaffold0007 (289-394)||(230864-230969)
[»] scaffold0070 (1 HSPs)
scaffold0070 (293-386)||(1344-1437)
[»] scaffold0022 (4 HSPs)
scaffold0022 (289-394)||(40078-40185)
scaffold0022 (289-394)||(138138-138245)
scaffold0022 (418-468)||(40016-40066)
scaffold0022 (418-468)||(138076-138126)
[»] scaffold0227 (2 HSPs)
scaffold0227 (319-394)||(16020-16095)
scaffold0227 (291-329)||(16123-16161)
[»] scaffold0202 (2 HSPs)
scaffold0202 (52-124)||(2255-2324)
scaffold0202 (178-220)||(2769-2811)
[»] scaffold0003 (1 HSPs)
scaffold0003 (310-394)||(351360-351444)
[»] scaffold0001 (1 HSPs)
scaffold0001 (292-341)||(183106-183155)


Alignment Details
Target: scaffold0018 (Bit Score: 233; Significance: 1e-128; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 20 - 468
Target Start/End: Original strand, 173235 - 173680
Alignment:
Q  20 tgattctggttttgttgtggagggtctgaggaggatttattgcacaatgcattgggtgcagagctgaaatattaaagcaccacctctttgcaagaggcag 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  173235 tgattctggttttgttgtggagggcctgaggaggatttattgcacaatgtagtgggtgcagaactgaaatattaaagcaccacctctttgcaagaggcag 173334  T
Q  120 ctttggtgagaaattattgtagtgagagtatgaattgaggcatgtatttataac-----------aatctgaacatttcaaataactccacaagtttgtt 208  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||| |||||||||||    
T  173335 ctttggtgagaaattcttgtagtgagagtatgaattgaggcatgtatttataaccatctgaattgaatttgaacatttcaaataactcgacaagtttgtt 173434  T
Q  209 atctgaatgtaacaatgatgttaatatgaagggaaaagaggcctgtgataaaatagaaacannnnnnnnnnnnnnaaaagacaatgttctatttaaattt 308  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||||||              || ||||||||||||||||||||||    
T  173435 atctgaatgtaacaatgatgttaatatcaagtgaaaagaggcccgtggtgaaatagaaacatttttttttttaaaaatagacaatgttctatttaaattt 173534  T
Q  309 tttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccatactcctaatagac 408  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||||||| ||||            
T  173535 tttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctcaaaccatcctcc-------- 173626  T
Q  409 ctaaaatagaaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
           | ||||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  173627 ------cataaaaacacctacttaacaccaaaagcaagaggtctcaattctaataggcct 173680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 173738 - 173790
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataaga 579  Q
    ||||||||| |||| |||||||| |||||||||| |||||||||||||||||||    
T  173738 tctgatggaatgatggtgatgaagcgcgtggtat-agagaaaaagagaataaga 173790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 38547041 - 38547145
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctca 389  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  38547041 caatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctca 38547140  T
Q  390 aacca 394  Q
    |||||    
T  38547141 aacca 38547145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 39134726 - 39134832
Alignment:
Q  289 acaatgttctatttaaattttttaaaac-ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||  |||||||||||||||||    
T  39134726 acaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacct 39134825  T
Q  388 caaacca 394  Q
    |||||||    
T  39134826 caaacca 39134832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 45758603 - 45758498
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |||||||||  ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  45758603 acaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 45758504  T
Q  389 aaacca 394  Q
    ||||||    
T  45758503 aaacca 45758498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 5316788 - 5316692
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  5316788 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 5316692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 23185535 - 23185439
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  23185535 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 23185439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 9173022 - 9173124
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| ||||||||||||||    
T  9173022 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9173121  T
Q  384 acc 386  Q
    |||    
T  9173122 acc 9173124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 9181004 - 9181106
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| ||||||||||||||    
T  9181004 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9181103  T
Q  384 acc 386  Q
    |||    
T  9181104 acc 9181106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 6221786 - 6221682
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||| ||| |||| | |||||||||||||| ||||||||| ||||||||||||    
T  6221786 acaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaacctc 6221688  T
Q  389 aaacca 394  Q
    ||||||    
T  6221687 aaacca 6221682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 4971623 - 4971719
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  4971623 caatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacc 4971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 6771897 - 6771801
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||| ||||||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctc 6771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 27559745 - 27559649
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  27559745 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 14146406 - 14146312
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  14146406 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 14146312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 43235774 - 43235879
Alignment:
Q  291 aatgttctatttaaatttttta--aaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||||   ||| ||||||||||| || ||||||||||   |||||||||| |||||||||||||||||||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctc 43235873  T
Q  389 aaacca 394  Q
    ||||||    
T  43235874 aaacca 43235879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 1366883 - 1366979
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||  ||||||| |||| |||||||| ||||||||    
T  1366883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacc 1366979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 5027657 - 5027561
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| | |||| ||||||||||    
T  5027657 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacc 5027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 44655849 - 44655753
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| | || ||||| |||| |||||||||||||||||    
T  44655849 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 44655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 26804054 - 26803952
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||| | |||||||||||||||||| ||||||||||| || ||||||||||||||||||   || ||||||||||||| |||||||||||| ||||||    
T  26804054 acaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacctc 26803958  T
Q  389 aaacca 394  Q
    ||||||    
T  26803957 aaacca 26803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 33170873 - 33170754
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| |||  ||||||||||| |||||| ||  ||||||||||||| |||||||||||| |    
T  33170873 aaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaa 33170774  T
Q  384 acctcaaaccatactcctaa 403  Q
    |||| ||||||  |||||||    
T  33170773 accttaaaccaccctcctaa 33170754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 17169064 - 17168968
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||  ||||||||||| |||||||||| |||||||| |||| | |||||||||||||||    
T  17169064 caatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacc 17168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 19955825 - 19955729
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||| |||| |||||| ||||||||||    
T  19955825 caatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 19955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 290 - 377
Target Start/End: Original strand, 21740942 - 21741029
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtataca 377  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||| | ||||||    
T  21740942 caatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 51607445 - 51607540
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtg-ccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 385  Q
    |||||| |||||| ||||||||||| ||||||| |||||| ||||||||||||| |||||||||| |||||||| |||| ||||||||||||||||    
T  51607445 aatgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaac 51607540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 3406524 - 3406430
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||| |  | |||||||| |||| |||||||||||||||||    
T  3406524 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 3440296 - 3440390
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||| |  | |||||||| |||| |||||||||||||||||    
T  3440296 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 5533422 - 5533316
Alignment:
Q  289 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    ||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||   ||||  |||| ||||||||||||| ||||||||||||||| ||    
T  5533422 acaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaact 5533323  T
Q  388 caaacca 394  Q
    |||||||    
T  5533322 caaacca 5533316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 293 - 395
Target Start/End: Complemental strand, 38853627 - 38853526
Alignment:
Q  293 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaac 392  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||   || | ||||| ||||||||||||| ||||||||||| |||||||||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatga-gaacctcaaac 38853529  T
Q  393 cat 395  Q
    |||    
T  38853528 cat 38853526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 290 - 388
Target Start/End: Complemental strand, 50881538 - 50881440
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||| | | | |||||||| ||||  ||||||||||||||||||    
T  50881538 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctc 50881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 291 - 388
Target Start/End: Original strand, 40501796 - 40501893
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||| |||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| || ||||| |||| ||||||||||| |||||||    
T  40501796 aatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctc 40501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 292 - 384
Target Start/End: Complemental strand, 16140161 - 16140069
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 384  Q
    |||||||||||| ||||||||||| ||||||||||||||  ||||||||||| |||||| | | |||||||| |||| |||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaa 16140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 10925957 - 10926060
Alignment:
Q  289 acaatgttctatttaaat-tttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    ||||| |||||||||| | ||||||||| |||||||||| |||||||||||||| ||| || |||||  |||||||||||| |||||||||||||| |||    
T  10925957 acaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgaggatcct 10926056  T
Q  388 caaa 391  Q
    ||||    
T  10926057 caaa 10926060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 50146405 - 50146307
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    ||||||||||||||||| ||||| ||| |||||| ||||||||||| |||||| |||| ||||||| || ||||||| || | ||||||||||||||||    
T  50146405 acaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaacct 50146307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 41697144 - 41697238
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| |||||||||| ||  |||||||||||  |||| ||| | |||||||| |||| |||||||||||||||||    
T  41697144 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacc 41697238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 13913485 - 13913583
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccg--tatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||| |||||||| ||||||||||| ||||||| ||| |||||  |||||||||| |||||| ||| |||||||| |||| |||||||||||| ||||    
T  13913485 caatgatctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacc 13913583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgta 373  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||||||||| || | ||||| ||||||||||||| ||||    
T  35392376 aatgttttatttaaattttttaagg-ataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 6889719 - 6889646
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| ||||||||||| |||||||||| ||  |||||||||||| |||| ||| | ||||||||    
T  6889719 caatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 6891565 - 6891492
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| ||||||||||| |||||||||| ||  |||||||||||| |||| ||| | ||||||||    
T  6891565 caatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6891492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 22865466 - 22865538
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| ||||||||||| ||||||||||| |||  ||||||| || |||||||||| ||||||||    
T  22865466 caatgttctatttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 43235889 - 43235939
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||||||||| || ||||||||||||||||||||||    
T  43235889 aaaaacatcaacctaacaccaaaagcaataggactcaattctaataggcct 43235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 578
Target Start/End: Original strand, 10926171 - 10926223
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    |||||||||||||| |||||| ||||| ||||| |||||| ||||||||||||    
T  10926171 tctgatggagtgatggtgatggaacgcatggtaccagagagaaagagaataag 10926223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 27906734 - 27906777
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccg 333  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||    
T  27906734 caatgttccatttatattttttaaaagataaatacaaggtgccg 27906777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 17322627 - 17322681
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcg 343  Q
    ||||||||||||||| ||||||| ||| |||||||||| ||  ||||||||||||    
T  17322627 acaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcg 17322681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 571
Target Start/End: Original strand, 39134950 - 39134995
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaaga 571  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||||    
T  39134950 tctgatggagtgatggtgatggaacgcatggtatcagagagaaaga 39134995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 466
Target Start/End: Original strand, 39134842 - 39134890
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggc 466  Q
    ||||||| | || |||||||||||| |||||||| ||||||||||||||    
T  39134842 aaaaacacccacctaacaccaaaagcaagaggacccaattctaataggc 39134890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 263 - 368
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  263 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctc 362  T
Q  389 aaacca 394  Q
    ||||||    
T  363 aaacca 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 39023 - 38918
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  39023 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctc 38924  T
Q  389 aaacca 394  Q
    ||||||    
T  38923 aaacca 38918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 9e-41; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 15167420 - 15167525
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15167420 acaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 15167519  T
Q  389 aaacca 394  Q
    ||||||    
T  15167520 aaacca 15167525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 15078854 - 15078751
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 15078755  T
Q  391 acca 394  Q
    ||||    
T  15078754 acca 15078751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 7944527 - 7944632
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||   |||||||||| ||||||||||||| |||||||||||||||||||    
T  7944527 acaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctc 7944626  T
Q  389 aaacca 394  Q
    ||||||    
T  7944627 aaacca 7944632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 25561502 - 25561603
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaag-ataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctcaa 25561599  T
Q  391 acca 394  Q
    ||||    
T  25561600 acca 25561603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 291 - 393
Target Start/End: Complemental strand, 8103008 - 8102906
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||| |||||||||| || |||||||||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctcaa 8102909  T
Q  391 acc 393  Q
    |||    
T  8102908 acc 8102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 23798267 - 23798363
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  23798267 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 23798363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 45475914 - 45475818
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  45475914 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 45475818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 8646303 - 8646201
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||| ||||||||| || ||||||    
T  8646303 acaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacataagaaacctc 8646205  T
Q  389 aaac 392  Q
    ||||    
T  8646204 aaac 8646201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 5721654 - 5721552
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 391  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||  || |||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaa 5721555  T
Q  392 cca 394  Q
    |||    
T  5721554 cca 5721552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 41677178 - 41677284
Alignment:
Q  289 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    ||||||||||||||||||||||| |||| ||||||||||| || ||||||||||||||||| | ||| |||||||||||||  |||||||||||||||||    
T  41677178 acaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacct 41677277  T
Q  388 caaacca 394  Q
    |||||||    
T  41677278 caaacca 41677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 11290282 - 11290177
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||   ||||| |||| ||||||||||||| |||||||||||| ||||||    
T  11290282 acaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacctc 11290183  T
Q  389 aaacca 394  Q
    ||||||    
T  11290182 aaacca 11290177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 39332410 - 39332515
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||| ||||| |||| |||||||||||||| | |||||| ||| |||| ||||| ||||||||||||| |||||||||||||||||||    
T  39332410 acaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 39332509  T
Q  389 aaacca 394  Q
    ||||||    
T  39332510 aaacca 39332515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 23606635 - 23606731
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| || ||||| |||| |||||||||||||||||    
T  23606635 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 23606731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 30883426 - 30883330
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  30883426 caatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 30883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 10917494 - 10917392
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| |||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| | ||||||||||||    
T  10917494 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgagga 10917395  T
Q  384 acc 386  Q
    |||    
T  10917394 acc 10917392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 5973112 - 5973217
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||   |||||||| |  ||||||||| || |||||||| ||||||||||    
T  5973112 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctc 5973211  T
Q  389 aaacca 394  Q
    ||||||    
T  5973212 aaacca 5973217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 23941096 - 23941201
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||| |||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||  |||||||||| ||| |||| | ||||||||||    
T  23941096 acaatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacctc 23941195  T
Q  389 aaacca 394  Q
    ||||||    
T  23941196 aaacca 23941201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 2952227 - 2952323
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  2952227 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 2952323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 5860750 - 5860846
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| | |||||||||| ||||    
T  5860750 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacc 5860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 306 - 394
Target Start/End: Complemental strand, 5942777 - 5942689
Alignment:
Q  306 ttttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    |||||||||| ||||||||||| || ||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaacca 5942689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 13534693 - 13534788
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  13534693 caatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 13624233 - 13624328
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  13624233 caatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13624328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 42600879 - 42600783
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||| | |||||||||| |||||||| |||| |||||||||||||||||    
T  42600879 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 42600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 37430166 - 37430260
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | | || ||||| |||| |||||||||||||||||    
T  37430166 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaacc 37430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 41879279 - 41879182
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||| ||||| |||||||| |||| || ||||||||| ||||    
T  41879279 acaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacc 41879182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 14509988 - 14510092
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtg-aaaatcactatcgtatacatgaggaacct 387  Q
    ||||||||| ||||||||||||||||| | ||||| |||||| ||||||||  || |||||||||||||| |||||||||| |||||||||||| |||||    
T  14509988 acaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacct 14510085  T
Q  388 caaacca 394  Q
    |||||||    
T  14510086 caaacca 14510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 366
Target Start/End: Original strand, 30674408 - 30674485
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcac 366  Q
    |||||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||||| |||| |||||||||||    
T  30674408 acaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 34789870 - 34789972
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 391  Q
    ||||||||||||||| | |||||| ||||||||||| || ||||||||||   |||||||||| ||||||||||||| |||||||||||| ||  |||||    
T  34789870 atgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaa 34789969  T
Q  392 cca 394  Q
    |||    
T  34789970 cca 34789972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 386
Target Start/End: Original strand, 3048530 - 3048619
Alignment:
Q  297 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | |  ||||||| |||| |||||||| ||||||||    
T  3048530 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaacc 3048619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 34048710 - 34048817
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccg--tatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||||||  |||||||| |||||||||| ||| ||  |||||||  ||||||||||||  ||||||||||||  ||||||||||||| ||    
T  34048710 acaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgaggatcc 34048809  T
Q  387 tcaaacca 394  Q
    ||| ||||    
T  34048810 tcatacca 34048817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 577
Target Start/End: Complemental strand, 8646073 - 8646024
Alignment:
Q  528 tgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 577  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  8646073 tgatggagtgatagtgatgaaacgcgtggtatcagagagaaagaaaataa 8646024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 9108591 - 9108551
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggt 329  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  9108591 acaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 34868184 - 34868223
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtg 330  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 8102897 - 8102847
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||||||||    
T  8102897 aaaaacatccacctaacaccaaaagcaagaggacccaattctaataggcct 8102847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 577
Target Start/End: Original strand, 34048938 - 34048986
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 577  Q
    ||||||||||| |||||| ||||||||||||| |||| |||||||||||    
T  34048938 gatggagtgatggtgatggaacgcgtggtatcggagagaaagagaataa 34048986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 15167546 - 15167583
Alignment:
Q  431 taacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  15167546 taacaccaaaagtaagaggacccaattctaataggcct 15167583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 25561639 - 25561676
Alignment:
Q  431 taacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  25561639 taacaccaaaagcaagaggacccaattctaataggcct 25561676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 578
Target Start/End: Complemental strand, 15078635 - 15078583
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    |||||| ||||||| |||||| |||||||||||||||||| ||| | ||||||    
T  15078635 tctgatagagtgatggtgatggaacgcgtggtatcagagagaaaaataataag 15078583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 578
Target Start/End: Original strand, 15167641 - 15167693
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    |||||| ||||||| |||||| |||||||||||||||||| ||| | ||||||    
T  15167641 tctgatagagtgatggtgatggaacgcgtggtatcagagagaaaaataataag 15167693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 1450 - 1347
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 1351  T
Q  391 acca 394  Q
    ||||    
T  1350 acca 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 578
Target Start/End: Complemental strand, 1231 - 1179
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    |||||| ||||||| |||||| |||||||||||||||||| ||| | ||||||    
T  1231 tctgatagagtgatggtgatggaacgcgtggtatcagagagaaaaataataag 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 2477589 - 2477694
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  2477589 acaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 2477688  T
Q  389 aaacca 394  Q
    ||||||    
T  2477689 aaacca 2477694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 291 - 386
Target Start/End: Complemental strand, 33774216 - 33774121
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  33774216 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacc 33774121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 28075883 - 28075787
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  28075883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 28075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 13727405 - 13727501
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  13727405 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13727501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 17354054 - 17353958
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  17354054 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacc 17353958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 20711726 - 20711822
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  20711726 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20711822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 21479594 - 21479498
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  21479594 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 291 - 392
Target Start/End: Complemental strand, 20611889 - 20611788
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||| ||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||| |||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 20611790  T
Q  391 ac 392  Q
    ||    
T  20611789 ac 20611788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 27788694 - 27788790
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  27788694 caattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 21183686 - 21183785
Alignment:
Q  295 ttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||||||||||||||||| |||||||||| ||  |||||||||| | ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaacca 21183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 21280645 - 21280550
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 385  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||||| |||| ||||||||||||||||    
T  21280645 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaac 21280550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 290 - 388
Target Start/End: Complemental strand, 34397957 - 34397859
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| ||| || ||||| ||||||||| ||||||||||||||    
T  34397957 caatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctc 34397859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 19737698 - 19737794
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||| | | |||||||| |||| |||||||||||||||||    
T  19737698 caatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 19737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 24711007 - 24711101
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||| || | |||||||| |||| |||||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 24711101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 6159539 - 6159434
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||  |||| ||| ||||||||| |||||| || |||||||||    
T  6159539 acaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacctc 6159440  T
Q  389 aaacca 394  Q
    ||||||    
T  6159439 aaacca 6159434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 289 - 368
Target Start/End: Complemental strand, 30121863 - 30121784
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcacta 368  Q
    |||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| |||||||||||||    
T  30121863 acaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcacta 30121784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 1155855 - 1155947
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 382  Q
    |||||||||||||| ||||||||||| |||||||||||||| | |||||||||| |||| ||| | |||||||| |||| |||||||||||||    
T  1155855 caatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 30832532 - 30832626
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||| | |||||||| |  ||||||| |||| ||||| |||||||||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacc 30832626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 31094072 - 31094129
Alignment:
Q  178 tgaacatttcaaataactccacaagtttgttatctgaatgtaacaatgatgttaatat 235  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  31094072 tgaacatttcaaacaactccacaagtttgttatctaaatgtaacaatgatgttaatat 31094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 394
Target Start/End: Complemental strand, 4037031 - 4036944
Alignment:
Q  307 tttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||| | ||||||||||||||||||||||||  | |||||||||| || || ||||||| |||||| ||||||||| ||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaacca 4036944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 27314184 - 27314258
Alignment:
Q  290 caatgttctatttaaattttttaaaac-ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||| || | ||||||||    
T  27314184 caatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaat 27314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 235230 - 235328
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgcc--gtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||  |||||||| |  ||||||||||  ||||||| |||| |||||||||||| ||||    
T  235230 caatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacc 235328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 31051230 - 31051191
Alignment:
Q  178 tgaacatttcaaataactccacaagtttgttatctgaatg 217  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  31051230 tgaacatttcaaataactccacaagtttgttatctaaatg 31051191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 31093573 - 31093652
Alignment:
Q  38 ggagggtctgaggaggatttattgcacaatgcattgggtgcagagctgaaatattaaagcaccacctctttgcaagaggcagc 120  Q
    |||||| ||| || ||||||||||||||||| | |||||||  || | |||||||||||   |||||||||||||||||||||    
T  31093573 ggagggcctggggcggatttattgcacaatgtagtgggtgcgtagttaaaatattaaag---cacctctttgcaagaggcagc 31093652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 2477702 - 2477752
Alignment:
Q  416 agaaaaacatctacttaacaccaaaaggaagaggactcaattctaataggc 466  Q
    ||||||||| | || |||||| ||||| |||||||||||||||||||||||    
T  2477702 agaaaaacacccacctaacacaaaaagcaagaggactcaattctaataggc 2477752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 578
Target Start/End: Original strand, 2477811 - 2477863
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    ||||| |||||||| |||| | || ||||||||||||||| ||||||||||||    
T  2477811 tctgacggagtgatggtgaaggaaagcgtggtatcagagataaagagaataag 2477863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 27994819 - 27994775
Alignment:
Q  340 tgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 384  Q
    |||| ||||| |||| ||||||||||||| |||||||||||||||    
T  27994819 tgcggtacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 27112133 - 27112028
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  27112133 acaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 27112034  T
Q  389 aaacca 394  Q
    ||||||    
T  27112033 aaacca 27112028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 36118462 - 36118567
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||    
T  36118462 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctc 36118561  T
Q  389 aaacca 394  Q
     |||||    
T  36118562 taacca 36118567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 52468389 - 52468284
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  52468389 acaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctc 52468290  T
Q  389 aaacca 394  Q
    ||||||    
T  52468289 aaacca 52468284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 10042004 - 10042106
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  10042004 acaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaacctc 10042103  T
Q  389 aaa 391  Q
    |||    
T  10042104 aaa 10042106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 54780879 - 54780783
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  54780879 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 54780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 2135325 - 2135428
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| || || |||||||||||||| ||||||||||||    
T  2135325 acaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacctc 2135424  T
Q  389 aaac 392  Q
    ||||    
T  2135425 aaac 2135428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 24397037 - 24396934
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||| || |||||||||||||||||| ||||||| ||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  24397037 acaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacctc 24396938  T
Q  389 aaac 392  Q
    ||||    
T  24396937 aaac 24396934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 380
Target Start/End: Complemental strand, 36178775 - 36178684
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatga 380  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||    
T  36178775 acaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 4167911 - 4167997
Alignment:
Q  305 attttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 391  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  4167911 attttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaa 4167997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 38209596 - 38209692
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  38209596 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 38209692  T

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Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 43455536 - 43455632
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  43455536 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 43455632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 291 - 386
Target Start/End: Original strand, 37777229 - 37777324
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  37777229 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 37777324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 2790745 - 2790842
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  2790745 acaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 2790842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 36362875 - 36362979
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||| | ||||||| |||||||||    
T  36362875 acaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-aggaacctc 36362973  T
Q  389 aaacca 394  Q
    ||||||    
T  36362974 aaacca 36362979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 45656278 - 45656173
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||| |||||||||||||||||| |||||| ||||||| | ||||||||||||| | ||||||||||||||||| | ||||||||||| |||||||    
T  45656278 acaatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctc 45656179  T
Q  389 aaacca 394  Q
    ||||||    
T  45656178 aaacca 45656173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 47129090 - 47128993
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||||| |||| |||||||||||||||||    
T  47129090 acaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 47128993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 10979002 - 10978906
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  10979002 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacc 10978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 48209342 - 48209246
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| || |||| |||||||||||| ||||    
T  48209342 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacc 48209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 37744916 - 37745019
Alignment:
Q  292 atgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    |||||||||||||||||||| |||| ||||||| |||||| || |||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  391 acca 394  Q
    ||||    
T  37745016 acca 37745019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 51691920 - 51692026
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacc--caaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||   ||| ||||||||||||| | |||||| || ||||||    
T  51691920 caatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacct 51692019  T
Q  388 caaacca 394  Q
    |||||||    
T  51692020 caaacca 51692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 34027681 - 34027585
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| ||||  ||||||||||||||||    
T  34027681 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacc 34027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 34768579 - 34768675
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||| | |||||||| | || |||||||||||||||||    
T  34768579 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacc 34768675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 54083241 - 54083343
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| |||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||  | ||||| |||| ||||||||||||||    
T  54083241 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgagga 54083340  T
Q  384 acc 386  Q
    |||    
T  54083341 acc 54083343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 5128852 - 5128945
Alignment:
Q  295 ttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||  | |||||| | |||||||| |||| |||||||||||||||||||    
T  5128852 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctc 5128945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 293 - 386
Target Start/End: Complemental strand, 13460306 - 13460213
Alignment:
Q  293 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||| || ||||| |||||||||| |||| ||||||||| |||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacc 13460213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 290 - 387
Target Start/End: Original strand, 35779331 - 35779427
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    |||||||||||| | ||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||| | || ||||||||||||||||||    
T  35779331 caatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacct 35779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 39329396 - 39329501
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||| |||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||  ||||||||  || |||||||| ||||||| ||    
T  39329396 acaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatc 39329495  T
Q  389 aaacca 394  Q
    ||||||    
T  39329496 aaacca 39329501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 40217327 - 40217230
Alignment:
Q  297 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |||||  ||||||||| || | |||||||||| ||||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaacca 40217230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 32128686 - 32128598
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacat 378  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||    
T  32128686 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 32128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatga 380  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| || | |||||||| |||| |||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 32915485 - 32915391
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||| | |||||||| | || ||||| | || |||||||||||||||||    
T  32915485 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacc 32915391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 10428202 - 10428308
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccc--------aaatgtgaaaatcactatcgtatacatgag 381  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||        || ||||||||| |||| ||||||||||||    
T  10428202 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgag 10428301  T
Q  382 gaacctc 388  Q
    |||||||    
T  10428302 gaacctc 10428308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 370
Target Start/End: Original strand, 39655258 - 39655339
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatc 370  Q
    ||||||||||||||||||||||||||| |||||||||| || ||| ||||||||| |||||||||| |||||||||| ||||    
T  39655258 acaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatcattatc 39655339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 386
Target Start/End: Complemental strand, 40089601 - 40089522
Alignment:
Q  307 tttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| |||||||||||||||||    
T  40089601 tttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 40089522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 19498604 - 19498510
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||  ||||||| |||| ||||| |||||||| ||||  ||||||||||||||||    
T  19498604 caatgttctatttatattttttaaaagataaatataaggtgccgt--atatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacc 19498510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 35465209 - 35465115
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 384  Q
    |||||||| |||||| |||||||| || ||||||| ||||||| ||||||||||| |||||| ||| |||||||| |||| |||||||||||||||    
T  35465209 acaatgttatatttatattttttacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaa 35465115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 1105632 - 1105538
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||||| |||||| | | |||||||| |||| | |||||||||| ||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacc 1105538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 17679502 - 17679440
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 352  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  17679502 caatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccca 17679440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 51964813 - 51964737
Alignment:
Q  290 caatgttctatttaaatttttt---aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| |||||||   |||| |||||||||||||||||||||||||||||||||||| | ||||||||    
T  51964813 caatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaat 51964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 16845124 - 16845027
Alignment:
Q  290 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||| |||| ||||||| |||||| ||||||||||   |||||||||  |||||||| |||| |||||||||||||||||    
T  16845124 caatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacc 16845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 374
Target Start/End: Original strand, 16882394 - 16882484
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtat 374  Q
    |||| ||||||||||||||| | ||||||||| ||||||| |||||||||| ||||| || |||||| ||| |||||||| |||| |||||    
T  16882394 aaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 15735189 - 15735093
Alignment:
Q  293 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaac 392  Q
    ||||||||||||||||||||||| |||||||||||  | |||||||     ||||||| |||  ||||||||| || |||||||||||||||| ||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatat-----atacaccaaaaaatgaaaatcattaccgtatacatgaggaacttcaaac 15735095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 526 - 577
Target Start/End: Complemental strand, 52468166 - 52468115
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 577  Q
    |||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  52468166 tctgatggagtgatggtgatggaacgcgtggtatcagagagaaagagaataa 52468115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 29425187 - 29425231
Alignment:
Q  298 tatttaaattttttaaaacataaatacaaggtgccgtatatatgc 342  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgc 29425231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 9578669 - 9578728
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggt-gccgtatatatgcgataca 348  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||| |||||||||| ||||    
T  9578669 caatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 24614056 - 24614018
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaag 327  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  24614056 acaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 30507191 - 30507241
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||||||||| |||||||||||||||| ||||||||    
T  30507191 aaaaacatccacctaacaccaaaagcaagaggactcaattcttataggcct 30507241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 16922334 - 16922407
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| ||||||||||| ||||||| || ||| |||||||||||  ||  |||||| ||||||||    
T  16922334 caatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaat 16922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 23508515 - 23508564
Alignment:
Q  290 caatgttctattta-aattttttaaaacataaatacaaggtgccgtatat 338  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  23508515 caatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 30507126 - 30507162
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaataca 325  Q
    ||||||||||||||||||||||||||| |||||||||    
T  30507126 acaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 55255359 - 55255316
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccg 333  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||    
T  55255359 caatgttccatttatattttttaaaagataaatacaaggtgccg 55255316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 27112020 - 27111970
Alignment:
Q  416 agaaaaacatctacttaacaccaaaaggaagaggactcaattctaataggc 466  Q
    ||||||||| | || |||||| ||||| |||||||||||||||||||||||    
T  27112020 agaaaaacacccacctaacacaaaaagcaagaggactcaattctaataggc 27111970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 36118576 - 36118626
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||||||||| |||| ||| ||||||||||||||||    
T  36118576 aaaaacatccacctaacaccaaaagcaagatgacccaattctaataggcct 36118626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 11906904 - 11906961
Alignment:
Q  298 tatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaat 355  Q
    |||||||||||||  ||| ||||||||||||| ||||||||||| | |||| ||||||    
T  11906904 tatttaaatttttataaagataaatacaaggtaccgtatatatgtggtacatccaaat 11906961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 386
Target Start/End: Complemental strand, 24969484 - 24969443
Alignment:
Q  345 tacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||| |||||||| |||| |||||||||||||||||    
T  24969484 tacacccaaaggtgaaaatgactaccgtatacatgaggaacc 24969443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 36178547 - 36178502
Alignment:
Q  530 atggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaat 575  Q
    ||||||||||||||||| |||||||||||| || || |||||||||    
T  36178547 atggagtgattgtgatggaacgcgtggtattagggagaaagagaat 36178502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 578
Target Start/End: Complemental strand, 27111911 - 27111859
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    ||||| |||||||| |||| | || ||||||||||||||| ||||||||||||    
T  27111911 tctgacggagtgatggtgaaggaaagcgtggtatcagagataaagagaataag 27111859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 529 - 577
Target Start/End: Original strand, 36118687 - 36118735
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 577  Q
    ||||||||||| || ||| || ||||||||||||||| |||||||||||    
T  36118687 gatggagtgatggtaatggaaagcgtggtatcagagagaaagagaataa 36118735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 578
Target Start/End: Original strand, 39329631 - 39329683
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    |||||| |||||||  ||||  |||||||||||||||||| ||||||||||||    
T  39329631 tctgattgagtgatgatgatagaacgcgtggtatcagagagaaagagaataag 39329683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 5e-36; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 2412186 - 2412081
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| || |||||||||||||||||||  ||||||||||||||||||    
T  2412186 acaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctc 2412087  T
Q  389 aaacca 394  Q
    ||||||    
T  2412086 aaacca 2412081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 14318387 - 14318492
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |||||  |||||||||||| |||||||||||||||||||    
T  14318387 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaacctc 14318486  T
Q  389 aaacca 394  Q
    ||||||    
T  14318487 aaacca 14318492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 36868878 - 36868983
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||| |||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||| |||    
T  36868878 acaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgaggaatctc 36868977  T
Q  389 aaacca 394  Q
    ||||||    
T  36868978 aaacca 36868983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 400
Target Start/End: Original strand, 2024644 - 2024755
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||  |||||||||||| | |||||||||||| ||||    
T  2024644 acaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgaggatcctc 2024743  T
Q  389 aaaccatactcc 400  Q
    ||||||| ||||    
T  2024744 aaaccatcctcc 2024755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 1366528 - 1366633
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||||||| || ||||||||||| ||  |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  1366528 acaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctc 1366627  T
Q  389 aaacca 394  Q
    | ||||    
T  1366628 atacca 1366633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 34426001 - 34425896
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||  | ||||||| || |||||||||||||||||||    
T  34426001 acaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctc 34425902  T
Q  389 aaacca 394  Q
    ||||||    
T  34425901 aaacca 34425896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 9364388 - 9364292
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  9364388 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 16198797 - 16198893
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  16198797 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 16198893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 30854426 - 30854330
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| || | |||||||| ||||||||||||||||||||||    
T  30854426 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacc 30854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 34756369 - 34756465
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  34756369 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 34756465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 394
Target Start/End: Original strand, 2530894 - 2531004
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||||| |||||||||||||| |||||||||| |||||||||| ||| ||||||||| || |||| ||||| |||||||||||||  |||||||||||||    
T  2530894 aaaagaaaatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgagga 2530993  T
Q  384 acctcaaacca 394  Q
    |||||||||||    
T  2530994 acctcaaacca 2531004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 27079108 - 27079012
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||  ||||||||||||||||    
T  27079108 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacc 27079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 28822345 - 28822441
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||| |||||    
T  28822345 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacc 28822441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 36187884 - 36187980
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||| ||||||    
T  36187884 atgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctc 36187980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 291 - 386
Target Start/End: Original strand, 16799331 - 16799426
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| | || |||||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 16799426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 293 - 386
Target Start/End: Complemental strand, 19523293 - 19523200
Alignment:
Q  293 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| | |||||||||||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacc 19523200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    ||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||| |||| ||||||||||||| || |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    ||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||| |||| ||||||||||||| || |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 38869366 - 38869462
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||| ||||    
T  38869366 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 38869462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 41911619 - 41911721
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||| | |||| |||||||||| | |||||||||||| |||||||| ||| |||||||||| || ||||||||||||||||| ||||||||||||    
T  41911619 acaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgaggaacctc 41911718  T
Q  389 aaa 391  Q
    |||    
T  41911719 aaa 41911721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 11242320 - 11242425
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||| |||||||||| ||||||||||  ||  ||||||||| |||||| |||||  || ||||||||| |||||||||||||||||||    
T  11242320 acaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctc 11242419  T
Q  389 aaacca 394  Q
    ||||||    
T  11242420 aaacca 11242425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 33037878 - 33037773
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||| |||||||||||||||||| ||||||||||| |  ||||||||||   |||||||||| ||||||| || || |||||||||||||||||||    
T  33037878 acaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacctc 33037779  T
Q  389 aaacca 394  Q
    ||||||    
T  33037778 aaacca 33037773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 40794329 - 40794434
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||| |||||||||||||||||| | |||||||| | |||||| ||||  |||||||| ||| ||||||||||||| |||||||||||| ||||||    
T  40794329 acaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctc 40794428  T
Q  389 aaacca 394  Q
    ||||||    
T  40794429 aaacca 40794434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 23284065 - 23284161
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||   ||||||||||||| |||||||||||| ||||||||||  ||||||| |||| |||||||||||||||||    
T  23284065 caatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgaggaacc 23284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 31194615 - 31194706
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 382  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| || ||||| | |||||||| |||| |||||||||||||    
T  31194615 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 10543769 - 10543667
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||| | ||||||||||||||| ||||||| ||||||  |||||||||||||||| ||||| ||||||||||||| ||||||||| ||||| |||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctcaa 10543671  T
Q  391 acca 394  Q
    ||||    
T  10543670 acca 10543667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 24395835 - 24395732
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||| | ||||| ||||| ||||||||||| | |||||| ||||||||| | ||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaactttaa 24395736  T
Q  391 acca 394  Q
    ||||    
T  24395735 acca 24395732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 15480094 - 15480188
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||||||| |||||||| | |||||||| |||| ||||| |||||||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 15480188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 306 - 394
Target Start/End: Complemental strand, 15639724 - 15639636
Alignment:
Q  306 ttttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    |||||| ||| |||||||||||||| ||||||||||||||||| |||||  ||||||||||| |||||||||| |||||||| ||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaaccttaaacca 15639636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 16592077 - 16592173
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||| ||||| ||||||||| |||| |||||||||||| |||||||| | |||||||| |||| |||||| ||||||||||    
T  16592077 caatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacc 16592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 27924172 - 27924084
Alignment:
Q  297 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 385  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| || ||||| |||| ||||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 40389539 - 40389635
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||| ||||| |||||||| |||| |||||  ||||||||||    
T  40389539 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacc 40389635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 2274985 - 2274891
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||||  |||||||| | |||||||| |||| |||||||| ||||||||    
T  2274985 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacc 2274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 7338096 - 7338023
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| ||| ||||||||    
T  7338096 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 7671022 - 7670929
Alignment:
Q  290 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 382  Q
    |||||||||||||| ||||||| |||| ||||||| |||||||||||||| | || |||||||||| |||||||| |||| |||||||||||||    
T  7671022 caatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgagg 7670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 22648738 - 22648843
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||||| |  ||| ||||| |||| ||||||||  ||||| || || ||||||    
T  22648738 acaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaacctc 22648837  T
Q  389 aaacca 394  Q
    ||||||    
T  22648838 aaacca 22648843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 22986561 - 22986657
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| | ||||||||||| | |||||||| ||| |||||||||||| |||||||| | |||||||| |||| |||||||||||| ||||    
T  22986561 caatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc 22986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 10407559 - 10407454
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||| |||||   |||| | ||| |||||||| |||| ||||| ||||||||| |||    
T  10407559 acaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaatctc 10407460  T
Q  389 aaacca 394  Q
     |||||    
T  10407459 caacca 10407454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 31881437 - 31881528
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 382  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||  ||| ||| |  ||||||| |||| |||||||||||||    
T  31881437 caatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 606252 - 606211
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtg 330  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  606252 acaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 17345054 - 17344949
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||||||| |  ||||||||||| || | | |||||||| ||||||||||  | ||||| |||| ||||| ||  | |||||||    
T  17345054 acaatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtatccacaaagaacctc 17344955  T
Q  389 aaacca 394  Q
    ||||||    
T  17344954 aaacca 17344949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 529 - 578
Target Start/End: Original strand, 2024868 - 2024917
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    ||||||||||| |||||| |||||| ||||||||||| ||||||||||||    
T  2024868 gatggagtgatggtgatggaacgcgcggtatcagagagaaagagaataag 2024917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 34425873 - 34425836
Alignment:
Q  431 taacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||||||| |||||||||||||||||||||||||    
T  34425873 taacaccaaaagcaagaggactcaattctaataggcct 34425836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 577
Target Start/End: Complemental strand, 2411964 - 2411913
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 577  Q
    |||||||||||||| |||||| ||| |||||||||| ||| |||||||||||    
T  2411964 tctgatggagtgatggtgatggaacacgtggtatcaaagagaaagagaataa 2411913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 576
Target Start/End: Original strand, 26719124 - 26719171
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaata 576  Q
    |||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  26719124 gatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaata 26719171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 576
Target Start/End: Original strand, 26988868 - 26988915
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaata 576  Q
    |||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  26988868 gatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaata 26988915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 580
Target Start/End: Original strand, 34307362 - 34307413
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    ||||||||||| |||||| |||  ||||||||||||| ||||||||||||||    
T  34307362 gatggagtgatggtgatggaacatgtggtatcagagagaaagagaataagaa 34307413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 580
Target Start/End: Complemental strand, 606210 - 606156
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    |||||||||||||| |||||| || | ||||||||||||  ||||||||||||||    
T  606210 tctgatggagtgatggtgatggaatgtgtggtatcagagtgaaagagaataagaa 606156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 27530581 - 27530543
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaag 327  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  27530581 acaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 40794442 - 40794492
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||| ||||    
T  40794442 aaaaacatcaacctaacaccaaaagtaagaggacccaattctaataagcct 40794492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 2024770 - 2024807
Alignment:
Q  431 taacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  2024770 taacaccaaaagcaagaggactcaattctaatatgcct 2024807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 578
Target Start/End: Complemental strand, 15639322 - 15639277
Alignment:
Q  533 gagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    ||||||| |||||| |||| ||||||||||||| ||||||||||||    
T  15639322 gagtgatggtgatggaacgtgtggtatcagagagaaagagaataag 15639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 15639616 - 15639579
Alignment:
Q  431 taacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  15639616 taacaccaaaagtaagaggacccaattctaataggcct 15639579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 22875040 - 22875003
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaa 326  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  22875040 acaatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 528 - 580
Target Start/End: Original strand, 40794552 - 40794604
Alignment:
Q  528 tgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    ||||||| |||| || ||| |||||||||||||| ||| ||||||||||||||    
T  40794552 tgatggaatgatggtaatggaacgcgtggtatcaaagagaaagagaataagaa 40794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 5e-36; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 38400895 - 38400790
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||  |||| ||||||||||||| |||||||||||||||||||    
T  38400895 acaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctc 38400796  T
Q  389 aaacca 394  Q
    ||||||    
T  38400795 aaacca 38400790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 21665705 - 21665819
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||| |    
T  21665705 acaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaaccac 21665804  T
Q  389 aaaccatactcctaa 403  Q
    ||||||  |||||||    
T  21665805 aaaccaccctcctaa 21665819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 12134045 - 12134150
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||   ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  12134045 acaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctc 12134144  T
Q  389 aaacca 394  Q
    ||||||    
T  12134145 aaacca 12134150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 16097105 - 16097000
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||| |||||||| |||| | |||||||||||||||||    
T  16097105 acaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctc 16097006  T
Q  389 aaacca 394  Q
    ||||||    
T  16097005 aaacca 16097000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 24035550 - 24035655
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |||||||||||| | |    
T  24035550 acaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgc 24035649  T
Q  389 aaacca 394  Q
    ||||||    
T  24035650 aaacca 24035655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 24410539 - 24410437
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  24410539 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 24410440  T
Q  384 acc 386  Q
    |||    
T  24410439 acc 24410437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 13800549 - 13800652
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccc-aaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||   |||||| |||||||||    
T  13800549 acaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgaggaacct 13800648  T
Q  388 caaa 391  Q
    ||||    
T  13800649 caaa 13800652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 28425715 - 28425816
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||  |||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||| | |||| ||||||||||||    
T  28425715 acaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctc 28425814  T
Q  389 aa 390  Q
    ||    
T  28425815 aa 28425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 3155313 - 3155217
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | | |||||||| |||| |||||||||||||||||    
T  3155313 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 3155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 4505990 - 4505894
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||||| |||| |||||||||||||||||    
T  4505990 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 4505894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 6965103 - 6965007
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  6965103 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 6965007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 29939868 - 29939964
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| |||||||| || |||||||||||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  29939868 caatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 29939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 9046127 - 9046029
Alignment:
Q  289 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  9046127 acaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 11912762 - 11912867
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||   |||| |||||||||| ||||||||||||||| ||||| |||||  |||||||||||| ||||||||| |||||||||    
T  11912762 acaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaacctc 11912861  T
Q  389 aaacca 394  Q
    ||||||    
T  11912862 aaacca 11912867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 10762571 - 10762667
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| | |||||||||| |||||||| |||| |||||||||||||||||    
T  10762571 caatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 10762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 37182739 - 37182665
Alignment:
Q  317 ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 391  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaa 37182665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 16227373 - 16227478
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| | |  ||||||||||||   ||||||| |||||||||    
T  16227373 acaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctc 16227472  T
Q  389 aaacca 394  Q
    ||||||    
T  16227473 aaacca 16227478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 26716225 - 26716128
Alignment:
Q  290 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||| |||| ||||||| |||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  26716225 caatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 26716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 12337454 - 12337550
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||||||| | |||||||| | |||||||| | |||||||| |||| |||||||||||||||||    
T  12337454 caatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 12337550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 386
Target Start/End: Original strand, 8907086 - 8907181
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||||| | || ||||| |||| |||||||||||| ||||    
T  8907086 aatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacc 8907181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 3953100 - 3953006
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||| | |||||||| | || ||||| |||||||||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacc 3953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 7162878 - 7162784
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| || || || | |||||||| |||| |||||| ||||||||||    
T  7162878 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacc 7162784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 7742138 - 7742244
Alignment:
Q  289 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 387  Q
    ||||||||||||||| ||||||| |||| |||||||||| ||| | |||||||||| |||| ||||| |||||||  |||||||||| ||||||||||||    
T  7742138 acaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacct 7742237  T
Q  388 caaacca 394  Q
    |||||||    
T  7742238 caaacca 7742244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 27506746 - 27506841
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 385  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||| | |||||||||| || ||||| ||||  |||||||||||||||    
T  27506746 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaac 27506841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 34694071 - 34694009
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 352  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  34694071 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacaccca 34694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 34716483 - 34716421
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 352  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  34716483 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacaccca 34716421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 40636234 - 40636172
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 352  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  40636234 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccca 40636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 580
Target Start/End: Original strand, 16227599 - 16227650
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  16227599 gatggagtgatggtgatgaaacgcgtggtatcagagagaaagagaataagaa 16227650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 10252511 - 10252400
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggt---gccgtatatatgcgatacacccaaatgtgaaaatcac-----tatcgtatacatgagg 382  Q
    ||||||| ||||||||||||||||| |||||||||||||   | ||||||||| | | ||||||||| ||||||| |||     |||| |||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccactatcatatcatatacatgagg 10252412  T
Q  383 aacctcaaacca 394  Q
    ||||||||||||    
T  10252411 aacctcaaacca 10252400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 5952736 - 5952783
Alignment:
Q  305 attttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 352  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  5952736 attttttaaaagataaatacaaggtgccgtatatatgcggtacaccca 5952783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 312 - 394
Target Start/End: Original strand, 22727530 - 22727612
Alignment:
Q  312 aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    |||| |||||||| | ||| |||||||||||| |||||||||| ||||||||||||| | |||||||||  | ||||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaacca 22727612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 42029242 - 42029166
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatca 365  Q
    ||||||||||||||||||||||||||| ||||||| |||||| | |||| |||   |||||| ||| ||||||||||    
T  42029242 acaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 29694432 - 29694376
Alignment:
Q  333 gtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||| ||||||||||||||||||||||||||     |||||||||| ||||||||||||    
T  29694432 gtatatacgcgatacacccaaatgtgaaaatcac-----tatacatgagaaacctcaaacca 29694376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 11952644 - 11952716
Alignment:
Q  322 tacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||| ||| |||||||||| ||||||| || |  ||||||||||||  | ||||||||||||||||||||||    
T  11952644 tacaaagtgtcgtatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaacca 11952716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 578
Target Start/End: Original strand, 21665928 - 21665980
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    ||||||||||||||  ||||| |||||||||||||| ||| ||||||||||||    
T  21665928 tctgatggagtgatgatgatggaacgcgtggtatcaaagagaaagagaataag 21665980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 580
Target Start/End: Complemental strand, 37182540 - 37182488
Alignment:
Q  528 tgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    ||||||||| || |||||| |||| ||||||||||||| ||||||||||||||    
T  37182540 tgatggagtaatggtgatgtaacgtgtggtatcagagagaaagagaataagaa 37182488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 11952593 - 11952643
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatat 340  Q
    ||||||||||||||||||||||||||| || ||||||| ||| |||||||||    
T  11952593 acaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 22727462 - 22727497
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatac 324  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22727462 acaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 577
Target Start/End: Original strand, 11952839 - 11952885
Alignment:
Q  531 tggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 577  Q
    ||||||||| |||||| ||||||||||| |||||| |||||||||||    
T  11952839 tggagtgatggtgatggaacgcgtggtaccagagagaaagagaataa 11952885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 12134160 - 12134210
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||  || |||||||||||| ||||| |||||||||||||||||||    
T  12134160 aaaaacatacacctaacaccaaaagcaagagaactcaattctaataggcct 12134210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 37622461 - 37622511
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||| | ||||||||||||||| |||||||| ||||||||||| ||||    
T  37622461 aaaaacacccacttaacaccaaaagtaagaggacccaattctaatatgcct 37622511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 580
Target Start/End: Original strand, 37622549 - 37622603
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    ||||||||||||||  ||||| |||||||||||| ||||| ||||| ||||||||    
T  37622549 tctgatggagtgatgatgatggaacgcgtggtatgagagagaaagataataagaa 37622603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 206496 - 206597
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||  ||||||||||||| |||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaa 206595  T
Q  391 ac 392  Q
    ||    
T  206596 ac 206597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 7398549 - 7398444
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||||| ||| ||||||||||||| | |||||||||||||||||    
T  7398549 acaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaacctc 7398450  T
Q  389 aaacca 394  Q
    ||||||    
T  7398449 aaacca 7398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 23859169 - 23859066
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||  ||||||| |||| |||||||||||||| ||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctcaa 23859070  T
Q  391 acca 394  Q
    ||||    
T  23859069 acca 23859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 9021812 - 9021908
Alignment:
Q  297 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  9021812 ctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagg-acctcaaacca 9021908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 27237427 - 27237532
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| ||||||||||||||  ||||||||| |||  | | ||| |||||||||||||||||||||||||||||||||    
T  27237427 acaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaacctc 27237526  T
Q  389 aaacca 394  Q
    ||||||    
T  27237527 aaacca 27237532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 18776771 - 18776867
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| ||||    
T  18776771 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacc 18776867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 2611266 - 2611369
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| |||  ||||||||||| |  ||||||||||||||||||    
T  2611266 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctc 2611365  T
Q  389 aaac 392  Q
    ||||    
T  2611366 aaac 2611369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 20091280 - 20091382
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| |||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  20091280 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 20091379  T
Q  384 acc 386  Q
    |||    
T  20091380 acc 20091382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 24525689 - 24525786
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||| |||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  24525689 acaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 24525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 8171544 - 8171640
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  8171544 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 8171640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 48983843 - 48983945
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| |||||| |||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  48983843 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgagga 48983942  T
Q  384 acc 386  Q
    |||    
T  48983943 acc 48983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 6765685 - 6765790
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||  |||| ||||| ||||||||||||| |||||| | ||| ||||||    
T  6765685 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagtaacctc 6765784  T
Q  389 aaacca 394  Q
    ||||||    
T  6765785 aaacca 6765790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 12419499 - 12419604
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||||||||| || || ||||| || |||||| |||||  ||||||||||||| | ||||||||||||||||    
T  12419499 acaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaacctc 12419598  T
Q  389 aaacca 394  Q
    ||||||    
T  12419599 aaacca 12419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 19692191 - 19692095
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| |||||||||| |||||| ||| |||||||| ||| ||||||||||||||||||    
T  19692191 caatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaacc 19692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 29077317 - 29077221
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | | |||||||| |||| |||||||||||||||||    
T  29077317 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacc 29077221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 12981422 - 12981319
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    |||||||||||||| |||||||||| ||||||||||||| || |||||| ||| ||||| |||| |||||||||||||  ||||| ||||||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaa 12981323  T
Q  391 acca 394  Q
    ||||    
T  12981322 acca 12981319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 10955579 - 10955485
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||| || | |||||||| |||| |||||||||||||||||    
T  10955579 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 10955485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 36891674 - 36891565
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||| ||||||||||  || ||||||| |||  |||||||| || |||| ||||| ||||||||||||| |||||||||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 36891575  T
Q  391 accatactcc 400  Q
    ||||| ||||    
T  36891574 accatcctcc 36891565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 386
Target Start/End: Complemental strand, 8239783 - 8239688
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||| ||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||||| | || |||||| ||||||||||    
T  8239783 aatgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacc 8239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 20153297 - 20153194
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    |||||| |||||||||||||||||| |||||||||| |||  |||||||||||||| |||||||  |||||||||||  ||||||||||||| | |||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctcaa 20153198  T
Q  391 acca 394  Q
    ||||    
T  20153197 acca 20153194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 12596294 - 12596388
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||| | |||||||| | |||||||| |||| ||||| |||||||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 12596388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 26254090 - 26254017
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||    
T  26254090 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 47984974 - 47985071
Alignment:
Q  290 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||| |||| | ||||| ||||||||||||||||||| |||||||||| |||||||| || | |||||||||||||||||    
T  47984974 caatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacc 47985071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 10329415 - 10329511
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |  | ||||||| |||||||| |||| |||||||||||| ||||    
T  10329415 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacc 10329511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 28749806 - 28749715
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 382  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||| || |||||||||| |||| |||||||||||||    
T  28749806 caatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 293 - 368
Target Start/End: Original strand, 21763595 - 21763670
Alignment:
Q  293 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcacta 368  Q
    ||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||| ||| |||||||||||||    
T  21763595 tgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcacta 21763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 18201235 - 18201121
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||| |||||||||||||||||||| ||||||||||| |||| |||||||| | |||||| ||  |||||||||  || | || ||||||||||||||    
T  18201235 acaatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctc 18201136  T
Q  389 aaaccatactcctaa 403  Q
    ||||||  |||||||    
T  18201135 aaaccaccctcctaa 18201121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 289 - 375
Target Start/End: Complemental strand, 23744894 - 23744808
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtata 375  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||  | |||||||||| ||||||    
T  23744894 acaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 23551075 - 23551172
Alignment:
Q  290 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||| |||||||| ||||||| |||| ||||||| |||||| |||||||||||| |||| ||||| |||||||| |||| |||||||||||||||||    
T  23551075 caatgatctatttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 23551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 33162344 - 33162417
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 363  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  33162344 caatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 294 - 386
Target Start/End: Original strand, 38414885 - 38414977
Alignment:
Q  294 gttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||  ||||||||||| ||||||| |||||| |||||||||| | |||||||||| |||||||| ||||  ||||||||||||||||    
T  38414885 gttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacc 38414977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 298 - 385
Target Start/End: Complemental strand, 38971341 - 38971255
Alignment:
Q  298 tatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 385  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||  ||||||| ||||||||||||||||| |||| ||| |||||||    
T  38971341 tatttaaattttt-aaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 383
Target Start/End: Original strand, 36902928 - 36903022
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    ||||||||||||||||||||||||| | ||||||||||| || ||||||||||   |||||| ||| |||||||||| ||  |||||||||||||    
T  36902928 acaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 23020498 - 23020589
Alignment:
Q  299 atttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 391  Q
    ||||| ||||||||||| ||||||| ||||||  |||||||||| | |||| |||| ||||||||||||| |||||||||||||||| |||||    
T  23020498 atttagattttttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaa 23020589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 9014782 - 9014868
Alignment:
Q  298 tatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 391  Q
    |||||||||||| ||||| |||||||||| ||| |||||||||       ||||||| ||||||||||||| |||||||||||| |||||||||    
T  9014782 tatttaaattttgtaaaagataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgagtaacctcaaa 9014868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 578
Target Start/End: Complemental strand, 23858949 - 23858897
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    ||||||| |||||| |||||| |||||||||||||||||| ||||||||||||    
T  23858949 tctgatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaataag 23858897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 580
Target Start/End: Original strand, 23020712 - 23020763
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    |||||| |||| |||||| |||||||||||||||||| ||||||||||||||    
T  23020712 gatggaatgatggtgatggaacgcgtggtatcagagagaaagagaataagaa 23020763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 7398434 - 7398384
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||||||||    
T  7398434 aaaaacatccacgtaacaccaaaagcaagaggacccaattctaataggcct 7398384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 580
Target Start/End: Original strand, 26917909 - 26917963
Alignment:
Q  526 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    |||||||||||||| |||||||||| | |||||||||| | ||||||||||||||    
T  26917909 tctgatggagtgatggtgatgaaacacatggtatcagatagaaagagaataagaa 26917963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 17800257 - 17800330
Alignment:
Q  321 atacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||| || ||||||||||   |||||||||| ||||||||||||| ||||| |||||||||  ||||||||    
T  17800257 atacaagttgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaacca 17800330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 419 - 468
Target Start/End: Original strand, 17800341 - 17800390
Alignment:
Q  419 aaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||| || |||||||||||| |||||||| ||||||||||||||||    
T  17800341 aaaacatccacctaacaccaaaagcaagaggacccaattctaataggcct 17800390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 366
Target Start/End: Original strand, 26917728 - 26917788
Alignment:
Q  306 ttttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcac 366  Q
    |||||||||| | ||||||||| || |||||||||| |||||| | |||||||||||||||    
T  26917728 ttttttaaaagaaaaatacaagatgacgtatatatgtgatacatctaaatgtgaaaatcac 26917788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 9014182 - 9014233
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatat 340  Q
    |||||||| |||||||||||||||||| |||||||||| |||  ||||||||    
T  9014182 acaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 580
Target Start/End: Complemental strand, 20153074 - 20153024
Alignment:
Q  530 atggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 580  Q
    |||||||||| |||||| |||| ||||||||||||| |||||||| |||||    
T  20153074 atggagtgatggtgatggaacgtgtggtatcagagagaaagagaacaagaa 20153024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 386
Target Start/End: Complemental strand, 25010475 - 25010434
Alignment:
Q  345 tacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||| |||||||| |||| |||||||||||||||||    
T  25010475 tacacccaaaggtgaaaatgactaccgtatacatgaggaacc 25010434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 574
Target Start/End: Original strand, 27237653 - 27237698
Alignment:
Q  529 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaa 574  Q
    ||||||||||| |||||| |||||||||||||||||| | ||||||    
T  27237653 gatggagtgatggtgatggaacgcgtggtatcagagagatagagaa 27237698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 48983952 - 48983989
Alignment:
Q  431 taacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  48983952 taacaccaaaagtaagaggacttaattctaataggcct 48983989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 8239682 - 8239642
Alignment:
Q  428 acttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||||||||| ||||||||  |||||||||||||||    
T  8239682 acttaacaccaaaagcaagaggacctaattctaataggcct 8239642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 54574832 - 54574936
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||| || |||||||||| | |||||||||||||||||    
T  54574832 acaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctc 54574931  T
Q  389 aaacc 393  Q
    |||||    
T  54574932 aaacc 54574936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 8420425 - 8420322
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||  |||||| | ||||||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctcaa 8420326  T
Q  391 acca 394  Q
    ||||    
T  8420325 acca 8420322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 47467782 - 47467688
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacc 47467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 54619209 - 54619305
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  54619209 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 54619305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 291 - 386
Target Start/End: Original strand, 8073345 - 8073440
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  8073345 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 8073440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 34290636 - 34290738
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||||    
T  34290636 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagga 34290735  T
Q  384 acc 386  Q
    |||    
T  34290736 acc 34290738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 21582872 - 21582775
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  21582872 acaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21582775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 291 - 386
Target Start/End: Complemental strand, 44708576 - 44708481
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||||| || |||||||||| |||||||| |||| |||||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 44708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 53506884 - 53506986
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||| |    
T  53506884 aaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaa 53506983  T
Q  384 acc 386  Q
    |||    
T  53506984 acc 53506986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 3953901 - 3953998
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |  | |||||||||||||||||    
T  3953901 acaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacc 3953998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 28689368 - 28689469
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||||||| | ||||| ||||||||||||  |||||||||||| || |||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaa 28689467  T
Q  391 ac 392  Q
    ||    
T  28689468 ac 28689469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 32319162 - 32319263
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 390  Q
    ||||||||||||||||||||||||| |||||||||| |||  ||||||||||| |||||||||| |||||||| |||||| |||| | ||||||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctcaa 32319261  T
Q  391 ac 392  Q
    ||    
T  32319262 ac 32319263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 37168473 - 37168372
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 383  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| | || ||||||| |||||||| |||| ||||||||||||||    
T  37168473 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgagga 37168374  T
Q  384 ac 385  Q
    ||    
T  37168373 ac 37168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 9878693 - 9878789
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||| ||||||||| ||||||||||| ||||||| ||||||| ||||||||||| |||||||||| |||||||| |||||||||||||| |||||||    
T  9878693 caatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacc 9878789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 26279643 - 26279536
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcact--atcgtatacatgaggaacc 386  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||  |||||||||||  |   |||||||||||||||    
T  26279643 acaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatgaggaacc 26279544  T
Q  387 tcaaacca 394  Q
    ||||||||    
T  26279543 tcaaacca 26279536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 290 - 384
Target Start/End: Original strand, 38681099 - 38681193
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 384  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||| ||| | |||||||| |||| |||||||||||||||    
T  38681099 caatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaa 38681193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 42098899 - 42098805
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| || || || | |||||||| |||| |||||||||||||||||    
T  42098899 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacc 42098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 54407158 - 54407252
Alignment:
Q  284 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacat 378  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| |||||||||    
T  54407158 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 27078575 - 27078671
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| || ||||| | |||||||| |||| |||||||||||| ||||    
T  27078575 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 27084372 - 27084468
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| || ||||| | |||||||| |||| |||||||||||| ||||    
T  27084372 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27084468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 43207244 - 43207339
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||  |||| |||||||| |||| |||||||||||||||||    
T  43207244 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgaggaacc 43207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 53149322 - 53149416
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| || |  | ||||| |||| |||||||||||||||||    
T  53149322 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacc 53149416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 790037 - 789932
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||| ||||||||||||||||||||  |||||||||||||| | ||||||||   |||||||||| || |||||||| | | |||||||||||||||||    
T  790037 acaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaacctc 789938  T
Q  389 aaacca 394  Q
    ||||||    
T  789937 aaacca 789932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 25855522 - 25855418
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||   | ||||||||  |||||||||||| |||||||| || |||||||    
T  25855522 acaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaacctc 25855424  T
Q  389 aaacca 394  Q
    ||||||    
T  25855423 aaacca 25855418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 36716031 - 36716103
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaa 362  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||    
T  36716031 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaa 36716103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 50939239 - 50939335
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||  | |||||||||| || ||||| |||| |||||||||||||||||    
T  50939239 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 50939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 42453505 - 42453407
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||| ||||       || |||||||||||||||||||    
T  42453505 acaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctc 42453413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 289 - 391
Target Start/End: Complemental strand, 49393190 - 49393090
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||| |||||||||||||||| |||||||||||| | |||||||||| | |||||||||| || ||||| |||| ||||||||||| |||||||    
T  49393190 acaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatgtg-tacacccaaaggtaaaaattactaccgtatacatga-gaacctc 49393093  T
Q  389 aaa 391  Q
    |||    
T  49393092 aaa 49393090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 36606065 - 36605973
Alignment:
Q  290 caatgttctatttaaattttttaaaac-ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 382  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||    
T  36606065 caatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 52374757 - 52374652
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||||||   | |||||||||| ||| |||||| |||||||||| | ||| | ||||||||||| ||||||||||| |||||||    
T  52374757 acaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaacctc 52374658  T
Q  389 aaacca 394  Q
    | ||||    
T  52374657 atacca 52374652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 50258631 - 50258726
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccc-aaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||  |  |||||||| ||||| |||| |||||||||||    
T  50258631 atgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacc 50258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 290 - 384
Target Start/End: Complemental strand, 18372583 - 18372485
Alignment:
Q  290 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcga----tacacccaaatgtgaaaatcactatcgtatacatgaggaa 384  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||     ||||| || | |||||||| |||| |||||||||||||||    
T  18372583 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaa 18372485  T

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Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 29598179 - 29598103
Alignment:
Q  317 ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||||||||| ||||||||||| ||||||| ||||  ||||| |||||| ||||||||||||||| |||||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaacca 29598103  T

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Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 29620423 - 29620490
Alignment:
Q  319 aaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||||||||||||| || | ||| | |||||||| |||| |||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacc 29620490  T

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Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 42453398 - 42453348
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||| ||||||  |||||||||||| |||||||||||||||||||||||||    
T  42453398 aaaaccatctatctaacaccaaaagtaagaggactcaattctaataggcct 42453348  T

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Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  295 ttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgataca 348  Q
    ||||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

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Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 52374631 - 52374594
Alignment:
Q  431 taacaccaaaaggaagaggactcaattctaataggcct 468  Q
    |||||||||||| |||||||||||||||||||||||||    
T  52374631 taacaccaaaagcaagaggactcaattctaataggcct 52374594  T

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Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 578
Target Start/End: Complemental strand, 26279413 - 26279366
Alignment:
Q  531 tggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 578  Q
    ||||||||| |||||| |||| ||||||||||||| ||||||||||||    
T  26279413 tggagtgatggtgatggaacgtgtggtatcagagagaaagagaataag 26279366  T

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Target: scaffold0182 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 23998 - 24103
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||| || ||||| ||| ||||| |||    
T  23998 acaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataaggaatctc 24097  T
Q  389 aaacca 394  Q
    ||||||    
T  24098 aaacca 24103  T

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Target: scaffold0039 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 106636 - 106539
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  106636 acaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 106539  T

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Target: scaffold0007 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 230864 - 230969
Alignment:
Q  289 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 388  Q
    |||||||||||||||||||| |||||| ||||||  ||||||  |||||||||||||| ||||||| ||||||||||||| | |||||||||||||| ||    
T  230864 acaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttc 230963  T
Q  389 aaacca 394  Q
    ||||||    
T  230964 aaacca 230969  T

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Target: scaffold0070 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 293 - 386
Target Start/End: Complemental strand, 1437 - 1344
Alignment:
Q  293 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  1437 tgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 1344  T

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Target: scaffold0022 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 40185 - 40078
Alignment:
Q  289 acaatgttctatttaaatttttt--aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| ||||   ||||||| || ||||||||||| |||||||||||||| ||||    
T  40185 acaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 40086  T
Q  387 tcaaacca 394  Q
    ||||||||    
T  40085 tcaaacca 40078  T

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Target: scaffold0022; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 138245 - 138138
Alignment:
Q  289 acaatgttctatttaaatttttt--aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 386  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| ||||   ||||||| || ||||||||||| |||||||||||||| ||||    
T  138245 acaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 138146  T
Q  387 tcaaacca 394  Q
    ||||||||    
T  138145 tcaaacca 138138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 40066 - 40016
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||| ||||| |||||||| ||||||||||||||||    
T  40066 aaaaacatccacctaacacaaaaagcaagaggacccaattctaataggcct 40016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 138126 - 138076
Alignment:
Q  418 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 468  Q
    ||||||||| || |||||| ||||| |||||||| ||||||||||||||||    
T  138126 aaaaacatccacctaacacaaaaagcaagaggacccaattctaataggcct 138076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 394
Target Start/End: Complemental strand, 16095 - 16020
Alignment:
Q  319 aaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    ||||||||| || ||||| |||||| |||| |||||  |||||||||||| |||||||||||| ||||||||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctcaaacca 16020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 16161 - 16123
Alignment:
Q  291 aatgttctatttaaattttttaaaacataaatacaaggt 329  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  16161 aatgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 2255 - 2324
Alignment:
Q  52 ggatttattgcacaatgcattgggtgcagagctgaaatattaaagcaccacctctttgcaagaggcagctttg 124  Q
    ||||||||||||||||| | |||||||  ||||||||||||||||   |||||||||||||||||| ||||||    
T  2255 ggatttattgcacaatgtagtgggtgcgtagctgaaatattaaag---cacctctttgcaagaggccgctttg 2324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 2769 - 2811
Alignment:
Q  178 tgaacatttcaaataactccacaagtttgttatctgaatgtaa 220  Q
    |||||||||| || ||||||||||||||||||||| |||||||    
T  2769 tgaacatttcgaagaactccacaagtttgttatctaaatgtaa 2811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 351360 - 351444
Alignment:
Q  310 ttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 394  Q
    |||||| |||||||||||||| ||||||||||   |||||||||| ||||||||| |||  | ||||| |||| |||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctcaaacca 351444  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 183155 - 183106
Alignment:
Q  292 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatg 341  Q
    |||||||||||| ||||||||||| |||||||||| ||  ||||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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