View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17174_low_5 (Length: 239)

Name: NF17174_low_5
Description: NF17174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17174_low_5
NF17174_low_5
[»] chr2 (32 HSPs)
chr2 (122-223)||(44692185-44692286)
chr2 (70-123)||(8906996-8907049)
chr2 (6-51)||(8907078-8907123)
chr2 (4-51)||(3155273-3155320)
chr2 (4-51)||(4505950-4505997)
chr2 (4-51)||(12337447-12337494)
chr2 (4-51)||(34694031-34694078)
chr2 (4-51)||(34716443-34716490)
chr2 (4-51)||(40636194-40636241)
chr2 (70-124)||(27506658-27506712)
chr2 (4-41)||(3953062-3953099)
chr2 (4-41)||(7162840-7162877)
chr2 (8-51)||(6965067-6965110)
chr2 (4-51)||(29939861-29939908)
chr2 (70-124)||(4506025-4506079)
chr2 (4-50)||(10762565-10762611)
chr2 (4-41)||(16097064-16097101)
chr2 (4-41)||(24035554-24035591)
chr2 (4-41)||(24410493-24410530)
chr2 (4-41)||(38400854-38400891)
chr2 (4-39)||(16227379-16227414)
chr2 (70-112)||(6965136-6965178)
chr2 (4-38)||(8327674-8327708)
chr2 (4-38)||(27506752-27506786)
chr2 (70-112)||(40636268-40636310)
chr2 (4-41)||(10252472-10252509)
chr2 (70-123)||(12337365-12337418)
chr2 (4-41)||(13800553-13800590)
chr2 (4-41)||(21665709-21665746)
chr2 (4-41)||(42029201-42029238)
chr2 (75-123)||(3155353-3155401)
chr2 (4-51)||(26716184-26716232)
[»] chr6 (26 HSPs)
chr6 (4-51)||(33774177-33774224)
chr6 (1-51)||(34397914-34397964)
chr6 (4-51)||(13727398-13727445)
chr6 (4-51)||(21280605-21280652)
chr6 (4-51)||(21479554-21479601)
chr6 (4-50)||(1155849-1155895)
chr6 (4-50)||(24710999-24711045)
chr6 (4-51)||(19737691-19737738)
chr6 (4-51)||(20711719-20711766)
chr6 (70-124)||(21280680-21280734)
chr6 (70-124)||(27788607-27788661)
chr6 (8-41)||(6159502-6159535)
chr6 (70-123)||(13727317-13727370)
chr6 (4-41)||(17354014-17354051)
chr6 (4-41)||(28075843-28075880)
chr6 (70-123)||(30832443-30832496)
chr6 (70-111)||(33774253-33774294)
chr6 (4-51)||(27314177-27314225)
chr6 (70-109)||(235157-235196)
chr6 (2-41)||(2477593-2477632)
chr6 (4-39)||(27788699-27788734)
chr6 (4-38)||(235236-235270)
chr6 (75-112)||(20711649-20711686)
chr6 (70-123)||(21479630-21479683)
chr6 (70-123)||(27314097-27314150)
chr6 (75-123)||(24710914-24710962)
[»] chr3 (44 HSPs)
chr3 (4-51)||(8073337-8073384)
chr3 (4-51)||(18372543-18372590)
chr3 (4-51)||(36716024-36716071)
chr3 (4-51)||(38681092-38681139)
chr3 (4-51)||(54619202-54619249)
chr3 (4-41)||(3953905-3953942)
chr3 (4-41)||(42098861-42098898)
chr3 (4-41)||(47467744-47467781)
chr3 (74-123)||(50258542-50258591)
chr3 (4-41)||(53149323-53149360)
chr3 (75-123)||(29620364-29620412)
chr3 (75-123)||(47467824-47467872)
chr3 (4-51)||(8420386-8420433)
chr3 (4-51)||(43207237-43207284)
chr3 (70-124)||(38681010-38681064)
chr3 (75-124)||(8073256-8073305)
chr3 (4-41)||(21582831-21582868)
chr3 (70-123)||(21582907-21582960)
chr3 (8-41)||(27078578-27078611)
chr3 (8-41)||(27084375-27084408)
chr3 (4-41)||(34290645-34290682)
chr3 (70-123)||(36715942-36715995)
chr3 (4-41)||(37168427-37168464)
chr3 (4-41)||(44708537-44708574)
chr3 (4-41)||(50258632-50258669)
chr3 (70-123)||(50939152-50939205)
chr3 (4-41)||(54407167-54407204)
chr3 (5-41)||(53506893-53506929)
chr3 (75-123)||(54407073-54407121)
chr3 (76-124)||(54619120-54619168)
chr3 (4-39)||(9878698-9878733)
chr3 (8-39)||(23641329-23641360)
chr3 (70-109)||(37168502-37168541)
chr3 (8-50)||(32319155-32319197)
chr3 (4-41)||(36606024-36606062)
chr3 (4-38)||(48157189-48157223)
chr3 (4-38)||(50939245-50939279)
chr3 (4-41)||(26279602-26279639)
chr3 (76-109)||(34290568-34290601)
chr3 (4-41)||(42453464-42453501)
chr3 (70-123)||(43207157-43207210)
chr3 (75-123)||(27078486-27078534)
chr3 (75-123)||(27084283-27084331)
chr3 (75-123)||(48720429-48720477)
[»] chr5 (40 HSPs)
chr5 (70-124)||(27079144-27079198)
chr5 (4-51)||(27079068-27079115)
chr5 (4-51)||(30854386-30854433)
chr5 (4-51)||(31194608-31194655)
chr5 (4-51)||(34756362-34756409)
chr5 (4-50)||(7338056-7338102)
chr5 (4-42)||(19523256-19523294)
chr5 (70-112)||(19523331-19523373)
chr5 (70-123)||(15480006-15480059)
chr5 (70-123)||(31194528-31194581)
chr5 (5-41)||(2274948-2274984)
chr5 (75-123)||(36187795-36187843)
chr5 (4-51)||(28822338-28822385)
chr5 (4-51)||(31881430-31881477)
chr5 (4-51)||(38869359-38869406)
chr5 (7-41)||(15480095-15480129)
chr5 (70-124)||(22986472-22986526)
chr5 (70-124)||(27924214-27924268)
chr5 (4-41)||(606211-606248)
chr5 (4-41)||(9364348-9364385)
chr5 (4-41)||(14318391-14318428)
chr5 (4-41)||(16198800-16198837)
chr5 (75-124)||(16591989-16592038)
chr5 (4-41)||(24395796-24395833)
chr5 (4-41)||(36187885-36187922)
chr5 (75-124)||(38869278-38869327)
chr5 (4-41)||(40389542-40389579)
chr5 (70-109)||(7671065-7671104)
chr5 (70-109)||(16198723-16198762)
chr5 (4-51)||(16592070-16592117)
chr5 (76-123)||(16799240-16799287)
chr5 (70-112)||(2275022-2275064)
chr5 (70-112)||(34756292-34756334)
chr5 (4-41)||(10407518-10407555)
chr5 (4-41)||(16799333-16799370)
chr5 (8-41)||(22648742-22648775)
chr5 (4-37)||(27924139-27924172)
chr5 (4-41)||(34425960-34425997)
chr5 (4-41)||(36868882-36868919)
chr5 (76-109)||(40389467-40389500)
[»] chr8 (35 HSPs)
chr8 (4-51)||(45475874-45475921)
chr8 (4-50)||(5860744-5860790)
chr8 (70-124)||(23606547-23606601)
chr8 (70-123)||(37430076-37430129)
chr8 (4-41)||(37430167-37430204)
chr8 (7-51)||(13534686-13534730)
chr8 (7-51)||(13624226-13624270)
chr8 (2-50)||(34868177-34868225)
chr8 (5-41)||(41879239-41879275)
chr8 (8-51)||(2952220-2952263)
chr8 (70-109)||(10917522-10917561)
chr8 (4-51)||(23606628-23606675)
chr8 (8-51)||(30883390-30883433)
chr8 (4-50)||(23798261-23798307)
chr8 (70-123)||(2952137-2952190)
chr8 (70-123)||(3048435-3048488)
chr8 (4-37)||(3048530-3048563)
chr8 (4-41)||(5973116-5973153)
chr8 (78-123)||(33963268-33963313)
chr8 (5-41)||(8646263-8646299)
chr8 (5-41)||(9108551-9108587)
chr8 (75-123)||(41879316-41879364)
chr8 (75-123)||(42600919-42600967)
chr8 (4-38)||(10917448-10917482)
chr8 (70-112)||(13534617-13534659)
chr8 (70-112)||(13624157-13624199)
chr8 (75-125)||(23798177-23798227)
chr8 (4-38)||(42600839-42600873)
chr8 (70-112)||(45475948-45475990)
chr8 (4-41)||(5721616-5721653)
chr8 (4-41)||(8102969-8103006)
chr8 (4-41)||(11290241-11290278)
chr8 (70-123)||(20003728-20003781)
chr8 (4-41)||(23941100-23941137)
chr8 (72-108)||(41677106-41677142)
[»] chr7 (36 HSPs)
chr7 (4-51)||(8171537-8171584)
chr7 (4-51)||(18776764-18776811)
chr7 (4-51)||(26254050-26254097)
chr7 (4-51)||(29077277-29077324)
chr7 (70-123)||(10329327-10329380)
chr7 (70-123)||(12596207-12596260)
chr7 (70-123)||(20091197-20091250)
chr7 (71-123)||(28749843-28749895)
chr7 (75-123)||(29077356-29077404)
chr7 (75-123)||(48983756-48983804)
chr7 (4-51)||(19692151-19692198)
chr7 (70-109)||(23551002-23551041)
chr7 (4-38)||(33162350-33162384)
chr7 (4-41)||(2611270-2611307)
chr7 (4-41)||(6765689-6765726)
chr7 (75-112)||(8171468-8171505)
chr7 (4-41)||(10329418-10329455)
chr7 (4-41)||(10955541-10955578)
chr7 (4-41)||(12596295-12596332)
chr7 (4-41)||(24525693-24525730)
chr7 (4-41)||(27237431-27237468)
chr7 (11-51)||(8239751-8239791)
chr7 (75-123)||(18776683-18776731)
chr7 (4-39)||(28749766-28749801)
chr7 (1-40)||(38414885-38414924)
chr7 (4-38)||(20091292-20091326)
chr7 (75-109)||(24525613-24525647)
chr7 (4-38)||(48983855-48983889)
chr7 (4-41)||(7398508-7398545)
chr7 (8-41)||(12419503-12419536)
chr7 (8-41)||(21763595-21763628)
chr7 (4-41)||(23744853-23744890)
chr7 (8-41)||(23859134-23859167)
chr7 (70-123)||(25010558-25010611)
chr7 (75-112)||(26254130-26254167)
chr7 (5-41)||(12981384-12981420)
[»] chr4 (59 HSPs)
chr4 (4-51)||(10978962-10979009)
chr4 (4-43)||(13460269-13460308)
chr4 (4-51)||(48209302-48209349)
chr4 (4-51)||(54780839-54780886)
chr4 (5-51)||(1105595-1105641)
chr4 (5-51)||(9578662-9578708)
chr4 (4-50)||(38209590-38209636)
chr4 (70-123)||(2790659-2790712)
chr4 (4-41)||(10428205-10428242)
chr4 (70-123)||(17679536-17679589)
chr4 (4-41)||(32915447-32915484)
chr4 (70-123)||(32915522-32915575)
chr4 (4-41)||(37514721-37514758)
chr4 (4-41)||(47129049-47129086)
chr4 (70-123)||(48209383-48209436)
chr4 (70-123)||(55255394-55255447)
chr4 (4-39)||(5128852-5128887)
chr4 (4-39)||(17679462-17679497)
chr4 (4-51)||(19498564-19498611)
chr4 (4-51)||(32128646-32128693)
chr4 (4-51)||(34768572-34768619)
chr4 (4-51)||(37777221-37777268)
chr4 (4-51)||(43455529-43455576)
chr4 (4-51)||(51691913-51691960)
chr4 (4-51)||(55255319-55255366)
chr4 (4-41)||(34027641-34027678)
chr4 (70-123)||(34027715-34027768)
chr4 (4-41)||(36118466-36118503)
chr4 (70-127)||(47129123-47129180)
chr4 (4-41)||(52468348-52468385)
chr4 (70-123)||(54780915-54780968)
chr4 (5-41)||(2790749-2790785)
chr4 (7-43)||(15735155-15735191)
chr4 (11-51)||(16922327-16922367)
chr4 (75-107)||(54083176-54083208)
chr4 (4-39)||(2135331-2135366)
chr4 (75-110)||(10428129-10428164)
chr4 (2-41)||(27112090-27112129)
chr4 (74-109)||(38352197-38352232)
chr4 (4-41)||(23508518-23508556)
chr4 (7-41)||(24614018-24614052)
chr4 (4-38)||(24969489-24969523)
chr4 (4-50)||(35779325-35779370)
chr4 (4-38)||(38352276-38352310)
chr4 (4-38)||(54083253-54083287)
chr4 (70-123)||(5128758-5128811)
chr4 (4-41)||(16882403-16882440)
chr4 (70-123)||(16922245-16922298)
chr4 (75-124)||(24969738-24969787)
chr4 (75-112)||(34768503-34768540)
chr4 (4-41)||(36178734-36178771)
chr4 (4-41)||(39329400-39329437)
chr4 (8-41)||(39655262-39655295)
chr4 (75-111)||(1105673-1105709)
chr4 (75-127)||(13460312-13460364)
chr4 (4-51)||(16845083-16845131)
chr4 (9-41)||(30507130-30507162)
chr4 (75-107)||(37777156-37777188)
chr4 (4-51)||(51964770-51964820)
[»] chr1 (48 HSPs)
chr1 (4-51)||(5027617-5027664)
chr1 (4-51)||(5316748-5316795)
chr1 (4-51)||(16140123-16140170)
chr1 (4-51)||(23185495-23185542)
chr1 (4-51)||(44655809-44655856)
chr1 (4-51)||(50881498-50881545)
chr1 (70-124)||(44655883-44655937)
chr1 (4-41)||(3406486-3406523)
chr1 (4-41)||(3440297-3440334)
chr1 (5-50)||(4971617-4971662)
chr1 (4-41)||(6771859-6771896)
chr1 (70-123)||(6771936-6771989)
chr1 (4-41)||(14146368-14146405)
chr1 (70-111)||(21740864-21740905)
chr1 (4-123)||(27906646-27906774)
chr1 (7-51)||(22865459-22865503)
chr1 (8-51)||(6889683-6889726)
chr1 (8-51)||(6891529-6891572)
chr1 (70-109)||(19955859-19955898)
chr1 (4-51)||(21740935-21740982)
chr1 (4-41)||(1366886-1366923)
chr1 (4-41)||(9173031-9173068)
chr1 (4-41)||(9181013-9181050)
chr1 (70-123)||(14146442-14146495)
chr1 (75-112)||(16140202-16140239)
chr1 (4-41)||(17169024-17169061)
chr1 (90-127)||(23185589-23185626)
chr1 (4-41)||(27559705-27559742)
chr1 (4-41)||(38547044-38547081)
chr1 (75-124)||(40501706-40501755)
chr1 (8-41)||(41697145-41697178)
chr1 (75-123)||(9172940-9172988)
chr1 (75-123)||(9180922-9180970)
chr1 (75-123)||(22865378-22865426)
chr1 (4-43)||(38853590-38853629)
chr1 (4-51)||(40501788-40501835)
chr1 (4-38)||(44895714-44895748)
chr1 (70-112)||(50881571-50881613)
chr1 (70-123)||(5027693-5027746)
chr1 (76-109)||(13913412-13913445)
chr1 (75-124)||(17169103-17169152)
chr1 (8-41)||(17322631-17322664)
chr1 (5-38)||(19955786-19955819)
chr1 (4-41)||(45758562-45758599)
chr1 (4-41)||(51607447-51607484)
chr1 (75-107)||(6889757-6889789)
chr1 (75-107)||(6891603-6891635)
chr1 (75-107)||(51607374-51607406)
[»] scaffold0070 (2 HSPs)
scaffold0070 (7-51)||(1403-1447)
scaffold0070 (75-123)||(1479-1527)
[»] scaffold1590 (1 HSPs)
scaffold1590 (4-41)||(267-304)
[»] scaffold0227 (1 HSPs)
scaffold0227 (5-50)||(16123-16168)
[»] scaffold0097 (1 HSPs)
scaffold0097 (4-41)||(38982-39019)
[»] scaffold0039 (2 HSPs)
scaffold0039 (4-41)||(106595-106632)
scaffold0039 (70-123)||(106670-106723)
[»] scaffold0001 (2 HSPs)
scaffold0001 (8-41)||(183121-183154)
scaffold0001 (70-123)||(183191-183244)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-41)||(173519-173555)
[»] scaffold0182 (1 HSPs)
scaffold0182 (4-39)||(24004-24039)
[»] scaffold0012 (1 HSPs)
scaffold0012 (4-41)||(206498-206535)


Alignment Details
Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 44692185 - 44692286
Alignment:
Q  122 tgactgaggaaaagacgctttggaaaggggtgcttatggagaggtatggtgagagggcgggtgatttggtggataatgagaatgattgttgaccttcaaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44692185 tgactgaggaaaagacgctttggaaaggggtgcttatggagaggtatggtgagagggcgggtgatttggtggataatgagaatgattgttgtccttcaaa 44692284  T
Q  222 ct 223  Q
    ||    
T  44692285 ct 44692286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 8907049 - 8906996
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  8907049 ctggcctcttttcattttcagagccgagcctccgaattctcaggaacggccctg 8906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 8907123 - 8907078
Alignment:
Q  6 ccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  8907123 ccttgtatttatcttttaaaaaatataaatagaacattactctttt 8907078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 3155273 - 3155320
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  3155273 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 3155320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 4505950 - 4505997
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  4505950 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 4505997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 12337494 - 12337447
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  12337494 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 12337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 34694031 - 34694078
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  34694031 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34694078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 34716443 - 34716490
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  34716443 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 40636194 - 40636241
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  40636194 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 40636241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 27506712 - 27506658
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  27506712 ctggcctcttttcattctcagagccgagcctccgaattcttagggacggccctga 27506658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 3953062 - 3953099
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3953062 caccttgtatttatcttttaaaaaatataaatagaaca 3953099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 7162840 - 7162877
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7162840 caccttgtatttatcttttaaaaaatataaatagaaca 7162877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 6965067 - 6965110
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  6965067 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 6965110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 29939908 - 29939861
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||| |||||||||||||||||||| | |||||||    
T  29939908 caccttgtatttatcttgtaaaaaatataaatagaacattgctctttt 29939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 4506025 - 4506079
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| |||||||||||  |||||||||||||||||||||||||  ||||||||||    
T  4506025 ctggcctcttttcatttccagagccgagcctccgaattctcagggacggccctga 4506079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 10762611 - 10762565
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||    
T  10762611 caccttatatttatcttttaaaaaatataaatagaacattgctcttt 10762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 16097064 - 16097101
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16097064 caccttgtatttatcttttaaaaaatttaaatagaaca 16097101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 24035591 - 24035554
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  24035591 caccttgtatttatcttttaaaaaatttaaatagaaca 24035554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24410493 - 24410530
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  24410493 caccttatatttatcttttaaaaaatataaatagaaca 24410530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 38400854 - 38400891
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  38400854 caccttgtatttatcttttaaaaaatttaaatagaaca 38400891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 16227414 - 16227379
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    |||||||||||||||||||||||||| |||||||||    
T  16227414 caccttgtatttatcttttaaaaaatttaaatagaa 16227379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 6965136 - 6965178
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||  |||||||||||||||||||||||||    
T  6965136 ctggcctcttttcatttccagagccgagcctccgaattctcag 6965178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 8327674 - 8327708
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  8327674 caccttatatttatcttttaaaaaatataaataga 8327708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 27506786 - 27506752
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  27506786 caccttatatttatcttttaaaaaatataaataga 27506752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 40636268 - 40636310
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||| |||||| ||||||||||||||||||    
T  40636268 ctggcctcttttcattcccagagctgagcctccgaattctcag 40636310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10252472 - 10252509
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  10252472 caccttgtatttatcttttaaaaaatttaaattgaaca 10252509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 12337418 - 12337365
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||  ||||||||||||| |||||||||||  |||||||||    
T  12337418 ctggcctcttttcatttccagagccgagccttcgaattctcagggacggccctg 12337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13800590 - 13800553
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  13800590 caccttatatttatcttttaaaaaatttaaatagaaca 13800553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21665746 - 21665709
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  21665746 caccgtgtatttatcttttaaaaaatttaaatagaaca 21665709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 42029201 - 42029238
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  42029201 caccttatatttatcttttaaaaaatttaaatagaaca 42029238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 3155353 - 3155401
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||| | | ||||||||||||||||||||||  |||||||||    
T  3155353 ctcttttcatttttaaagccgagcctccgaattctcagggacggccctg 3155401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 26716184 - 26716232
Alignment:
Q  4 caccttgtatttatctttt-aaaaaatataaatagaacactactctttt 51  Q
    |||||| |||||||||||| ||||||||||||||||||| | |||||||    
T  26716184 caccttatatttatcttttaaaaaaatataaatagaacattgctctttt 26716232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 33774177 - 33774224
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  33774177 caccttgtatttatcttttaaaaaatataaatagaacattactctttt 33774224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34397914 - 34397964
Alignment:
Q  1 cgtcaccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  34397914 cgtcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 13727445 - 13727398
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  13727445 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 13727398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 21280605 - 21280652
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  21280605 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 21280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 21479554 - 21479601
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  21479554 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 21479601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 1155895 - 1155849
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||    
T  1155895 caccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 24711045 - 24710999
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||    
T  24711045 caccttgtatttatcttttaaaaaatataaatagaacatcactcttt 24710999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 19737738 - 19737691
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||    
T  19737738 caccttgtatttatctttaaaaaaatataaatagaacattgctctttt 19737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 20711766 - 20711719
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  20711766 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 20711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 21280680 - 21280734
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| |||||||||||  |||||||||||||||||||||||||  ||||||||||    
T  21280680 ctggcctcttttcatttccagagccgagcctccgaattctcagggacggccctga 21280734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 27788661 - 27788607
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| |||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  27788661 ctggcctcttttcattcccagagccgagcctccgaattcttagggacggccctga 27788607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 6159502 - 6159535
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||    
T  6159502 ttgtatttatcttttaaaaaatataaatagaaca 6159535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 13727370 - 13727317
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||  |||||||||||||||||||||||||  |||||||||    
T  13727370 ctggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17354014 - 17354051
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  17354014 caccttatatttatcttttaaaaaatataaatagaaca 17354051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 28075843 - 28075880
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  28075843 caccttatatttatcttttaaaaaatataaatagaaca 28075880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 30832496 - 30832443
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| ||||||||||||| |||||||||||  |||||||||    
T  30832496 ctggcctcttttcattcccagagccgagccttcgaattctcagggacggccctg 30832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 33774253 - 33774294
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctca 111  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  33774253 ctggcctcttttcattttcagagccgagcctccgaattctca 33774294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 27314225 - 27314177
Alignment:
Q  4 caccttgtatttatctttt-aaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  27314225 caccttgtatttatctttttaaaaaatataaatagaacattgctctttt 27314177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 235196 - 235157
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattct 109  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  235196 ctggtctcttttcattctcatagccgaacctccgaattct 235157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 2477632 - 2477593
Alignment:
Q  2 gtcaccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  2477632 gtcaccttgtatttatcttttaaaaaatttaaattgaaca 2477593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 27788734 - 27788699
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    |||||| |||||||||||||||||||||||||||||    
T  27788734 caccttatatttatcttttaaaaaatataaatagaa 27788699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 235270 - 235236
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  235270 caccttatatttatcttttaaaaaatataaataga 235236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 20711686 - 20711649
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  20711686 ctcttttcattcccagaaccgagcctccgaattctcag 20711649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 21479630 - 21479683
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||  ||||||||||||||| |||||||||  |||||||||    
T  21479630 ctggcctcttttcatttccagagccgagcctccaaattctcagagacggccctg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 27314150 - 27314097
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| ||||| |||||||||||||| ||||  |||||||||    
T  27314150 ctggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 24710962 - 24710914
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| | |||| ||||||||||||||||||  |||||||||    
T  24710962 ctcttttcattccctgagctgagcctccgaattctcagggacggccctg 24710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 8073384 - 8073337
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  8073384 caccttgtatttatcttttaaaaaatataaatagaacattactctttt 8073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 18372543 - 18372590
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  18372543 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 18372590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 36716071 - 36716024
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  36716071 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 36716024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 38681139 - 38681092
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  38681139 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 38681092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 54619249 - 54619202
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  54619249 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 54619202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 3953942 - 3953905
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3953942 caccttgtatttatcttttaaaaaatataaatagaaca 3953905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 42098861 - 42098898
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42098861 caccttgtatttatcttttaaaaaatataaatagaaca 42098898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 47467744 - 47467781
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47467744 caccttgtatttatcttttaaaaaatataaatagaaca 47467781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 50258591 - 50258542
Alignment:
Q  74 tctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  50258591 tctcttttcgttcccagagccgagcctccgaattctcaggaacggccctg 50258542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 53149360 - 53149323
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53149360 caccttgtatttatcttttaaaaaatataaatagaaca 53149323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 29620412 - 29620364
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  29620412 ctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 47467824 - 47467872
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  47467824 ctcttttcattcccagagccgagcctccgaattctcagggacggccctg 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 8420386 - 8420433
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  8420386 caccttgtatttatcttttaaaaaatttaaatagaacattattctttt 8420433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 43207284 - 43207237
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  43207284 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 43207237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 38681064 - 38681010
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| |||||||||||  |||||||||||||||||||||||||  ||||||||||    
T  38681064 ctggcctcttttcatttccagagccgagcctccgaattctcagggacggccctga 38681010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 8073305 - 8073256
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||||||||||  |||||||||||||||||||||||||  ||||||||||    
T  8073305 ctcttttcatttccagagccgagcctccgaattctcagggacggccctga 8073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21582831 - 21582868
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  21582831 caccttgtatttatcttttaaaaaatataaataaaaca 21582868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 21582907 - 21582960
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| || ||||||||||||||||||||||  |||||||||    
T  21582907 ctggcctcttttcattcccaaagccgagcctccgaattctcagggacggccctg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 27078611 - 27078578
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||    
T  27078611 ttgtatttatcttttaaaaaatataaatagaaca 27078578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 27084408 - 27084375
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||    
T  27084408 ttgtatttatcttttaaaaaatataaatagaaca 27084375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 34290682 - 34290645
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  34290682 caccttatatttatcttttaaaaaatataaatagaaca 34290645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 36715995 - 36715942
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||  |||||||||||||||||||||||||  |||||||||    
T  36715995 ctggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 36715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 37168427 - 37168464
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  37168427 caccttatatttatcttttaaaaaatataaatagaaca 37168464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 44708537 - 44708574
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  44708537 caccttatatttatcttttaaaaaatataaatagaaca 44708574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 50258669 - 50258632
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||| |||||||||||||||||||||||    
T  50258669 caccttgtatttattttttaaaaaatataaatagaaca 50258632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 50939205 - 50939152
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||    
T  50939205 ctggcctcttttcattctcagagccgagcccccgaattcttagggacggccctg 50939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 54407204 - 54407167
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  54407204 caccttatatttatcttttaaaaaatataaatagaaca 54407167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 53506929 - 53506893
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||| |||||||||||||||||||||||||||||||    
T  53506929 accttatatttatcttttaaaaaatataaatagaaca 53506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 54407121 - 54407073
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||| ||  |||||||||    
T  54407121 ctcttttcattcccagagccgagcctccgaattcttagggacggccctg 54407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 54619168 - 54619120
Alignment:
Q  76 tcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    ||||||||||  |||||||||||||||||||||||||  ||||||||||    
T  54619168 tcttttcatttccagagccgagcctccgaattctcagggacggccctga 54619120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 9878733 - 9878698
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    |||||| |||||||||||||||||||||||||||||    
T  9878733 caccttatatttatcttttaaaaaatataaatagaa 9878698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 23641360 - 23641329
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaa 39  Q
    ||||||||||||||||||||||||||||||||    
T  23641360 ttgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 37168502 - 37168541
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattct 109  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  37168502 ctggcctcttttcattcccagagccgagcctccgaattct 37168541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 32319197 - 32319155
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||||||||||||||||||| ||||||||||| || |||||    
T  32319197 ttgtatttatcttttaaaaaatttaaatagaacattattcttt 32319155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 36606024 - 36606062
Alignment:
Q  4 caccttgtatttatctttt-aaaaaatataaatagaaca 41  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  36606024 caccttgtatttatctttttaaaaaatataaatagaaca 36606062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 48157189 - 48157223
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  48157189 caccttatatttatcttttaaaaaatataaataga 48157223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 50939279 - 50939245
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  50939279 caccttatatttatcttttaaaaaatataaataga 50939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 26279602 - 26279639
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  26279602 caccttctatttatcttttaaaaaatttaaatagaaca 26279639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 34290601 - 34290568
Alignment:
Q  76 tcttttcattctcagagccgagcctccgaattct 109  Q
    ||||||||||| ||||||||||||||||||||||    
T  34290601 tcttttcattcccagagccgagcctccgaattct 34290568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 42453464 - 42453501
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  42453464 caccttgtatttatcttttaaaaaatttaaattgaaca 42453501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 43207210 - 43207157
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| ||||||||||||||| |||||| ||  |||||||||    
T  43207210 ctggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 43207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 27078534 - 27078486
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||  ||||||| |||||||||||||||||  |||||||||    
T  27078534 ctcttttcatttccagagccaagcctccgaattctcagggacggccctg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 27084331 - 27084283
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||  ||||||| |||||||||||||||||  |||||||||    
T  27084331 ctcttttcatttccagagccaagcctccgaattctcagggacggccctg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 48720477 - 48720429
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| ||||||||||||||| |||||| ||  |||||||||    
T  48720477 ctcttttcattcccagagccgagcctcccaattcttagggacggccctg 48720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 27079144 - 27079198
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  27079144 ctggcctcttttcattctcagagccgagcctccgaattctcagggacggccctga 27079198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 27079068 - 27079115
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  27079068 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 27079115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 30854386 - 30854433
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  30854386 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 30854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 31194655 - 31194608
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  31194655 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 34756409 - 34756362
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  34756409 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34756362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 7338056 - 7338102
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||    
T  7338056 caccttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 19523256 - 19523294
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacac 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19523256 caccttgtatttatcttttaaaaaatataaatagaacac 19523294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 19523331 - 19523373
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  19523331 ctggtctcttttcattcccagagccgagcctccgaattctcag 19523373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 15480059 - 15480006
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  15480059 ctggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 15480006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 31194581 - 31194528
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||||||||| |||||||||||||||||||| ||||  |||||||||    
T  31194581 ctggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 2274948 - 2274984
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  2274948 accttgtatttatcttttaaaaaatataaatagaaca 2274984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 36187843 - 36187795
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  36187843 ctcttttcattcccagagccgagcctccgaattctcagggacggccctg 36187795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 28822385 - 28822338
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  28822385 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 28822338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 31881477 - 31881430
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||    
T  31881477 caccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 38869406 - 38869359
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  38869406 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 38869359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 15480129 - 15480095
Alignment:
Q  7 cttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||||||||||||    
T  15480129 cttgtatttatcttttaaaaaatataaatagaaca 15480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 22986526 - 22986472
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| ||||||||||||||||||| |||||||||||||||||   ||||||||||    
T  22986526 ctggcctcttttcattctcagagctgagcctccgaattctcacggacggccctga 22986472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 27924214 - 27924268
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||| |||||||||||||||||| |||||| ||||||||| || |||||||||||    
T  27924214 ctggcctcttttcattctcagagtcgagcccccgaattcttagaaacggccctga 27924268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 606211 - 606248
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  606211 caccttgtatttatcttttaaaaaatttaaatagaaca 606248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 9364348 - 9364385
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9364348 caccttatatttatcttttaaaaaatataaatagaaca 9364385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 14318428 - 14318391
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14318428 caccttgtatttatcttttaaaaaatttaaatagaaca 14318391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16198837 - 16198800
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  16198837 caccttatatttatcttttaaaaaatataaatagaaca 16198800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 16592038 - 16591989
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  16592038 ctcttttcattctcagagccgagcctccaaattctcaaggacggccctga 16591989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24395796 - 24395833
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  24395796 caccttgtatttatcttttaaaaaatttaaatagaaca 24395833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 36187922 - 36187885
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||| |||||||||||||||||||||||    
T  36187922 caccttgtatttatattttaaaaaatataaatagaaca 36187885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 38869327 - 38869278
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  38869327 ctcttttcattcccagagccgagcctccgaattcttagggacggccctga 38869278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 40389579 - 40389542
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40389579 caccttatatttatcttttaaaaaatataaatagaaca 40389542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 7671065 - 7671104
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattct 109  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  7671065 ctggcctcttttcattcccagagccgagcctccgaattct 7671104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 16198762 - 16198723
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattct 109  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  16198762 ctggcctcttttcattcccagagccgagcctccgaattct 16198723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 16592117 - 16592070
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||| ||||||||||||||| ||||||||||||||||| | |||||||    
T  16592117 caccctgtatttatcttttagaaaatataaatagaacattgctctttt 16592070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 16799287 - 16799240
Alignment:
Q  76 tcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||||    
T  16799287 tcttttcattcccagagccgagcctccgaattcttagggacggccctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 2275022 - 2275064
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  2275022 ctggcctcttttcattcccagaaccgagcctccgaattctcag 2275064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 34756334 - 34756292
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||  |||||||||||||||||||||||||    
T  34756334 ctggcctcttttcatttccagagccgagcctccgaattctcag 34756292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10407518 - 10407555
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  10407518 caccttgtgtttatcttttaaaaaatttaaatagaaca 10407555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16799370 - 16799333
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  16799370 caccttatatttattttttaaaaaatataaatagaaca 16799333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 22648775 - 22648742
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||| |||||||||||    
T  22648775 ttgtatttatcttttaaaaaatttaaatagaaca 22648742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 27924139 - 27924172
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatag 37  Q
    |||||| |||||||||||||||||||||||||||    
T  27924139 caccttatatttatcttttaaaaaatataaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 34425960 - 34425997
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  34425960 caccttgtatttatcttttaaaaaattgaaatagaaca 34425997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 36868919 - 36868882
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||  |||||||||||    
T  36868919 caccttgtatttatcttttaaaaaaattaaatagaaca 36868882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 40389500 - 40389467
Alignment:
Q  76 tcttttcattctcagagccgagcctccgaattct 109  Q
    ||||||||||| ||||||||||||||||||||||    
T  40389500 tcttttcattcccagagccgagcctccgaattct 40389467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 45475874 - 45475921
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  45475874 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 45475921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 5860790 - 5860744
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||    
T  5860790 caccttgtatttatcttttaaaaaatataaatagaacattgctcttt 5860744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 23606601 - 23606547
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    ||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  23606601 ctggtctcttttcattcccagagccgagcctccgaattcttagggacggccctga 23606547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 37430129 - 37430076
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  37430129 ctggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 37430204 - 37430167
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37430204 caccttgtatttatcttttaaaaaatataaatagaaca 37430167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 13534730 - 13534686
Alignment:
Q  7 cttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  13534730 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 13534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 13624270 - 13624226
Alignment:
Q  7 cttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  13624270 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 13624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 34868225 - 34868177
Alignment:
Q  2 gtcaccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||||||||||||||||||||||||| ||||||||||| || |||||    
T  34868225 gtcaccttgtatttatcttttaaaaaatttaaatagaacattattcttt 34868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 41879239 - 41879275
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  41879239 accttgtatttatcttttaaaaaatataaatagaaca 41879275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 2952263 - 2952220
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  2952263 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 2952220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 10917522 - 10917561
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattct 109  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10917522 ctggcctcttttcattctcagagccgagcctccgaattct 10917561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 23606675 - 23606628
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  23606675 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 23606628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 30883390 - 30883433
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  30883390 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 30883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 23798307 - 23798261
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||    
T  23798307 caccttatatttatcttttaaaaaatataaatagaacattgctcttt 23798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 2952190 - 2952137
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||  |||||||||||||||||||||||||  |||||||||    
T  2952190 ctggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 3048488 - 3048435
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||  |||||||||||||||||||||||||  |||||||||    
T  3048488 ctggcctcttttcatttccagagccgagcctccgaattctcagagacggccctg 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 3048563 - 3048530
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatag 37  Q
    ||||||||||||||||||||||||||||||||||    
T  3048563 caccttgtatttatcttttaaaaaatataaatag 3048530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5973153 - 5973116
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  5973153 caccttgtatttatcttttaaaaaatttaaatagaaca 5973116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 33963313 - 33963268
Alignment:
Q  78 ttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||    
T  33963313 ttttcattctcaaagccgagcctccgaattctcatgaacggccctg 33963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 8646263 - 8646299
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8646263 accttgtatttatcttttaaaaaatttaaatagaaca 8646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 9108551 - 9108587
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaaca 9108587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 41879316 - 41879364
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| ||||||||||||| |||||||||||  |||||||||    
T  41879316 ctcttttcattcccagagccgagccttcgaattctcagggacggccctg 41879364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 42600919 - 42600967
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||  |||||||||    
T  42600919 ctcttttcattttcagagccgagcctccgaattcttagggacggccctg 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 10917448 - 10917482
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  10917448 caccttatatttatcttttaaaaaatataaataga 10917482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 13534659 - 13534617
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||| |||||||||||||||||||| ||||    
T  13534659 ctggcctcttttcattcccagagccgagcctccgaattttcag 13534617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 13624199 - 13624157
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||| |||||||||||||||||||| ||||    
T  13624199 ctggcctcttttcattcccagagccgagcctccgaattttcag 13624157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 23798227 - 23798177
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctgac 125  Q
    |||||||| ||| |||||||||||||||||||||| ||  |||||||||||    
T  23798227 ctcttttcgttcccagagccgagcctccgaattcttagggacggccctgac 23798177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 42600839 - 42600873
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  42600839 caccttatatttatcttttaaaaaatataaataga 42600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 45475948 - 45475990
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  45475948 ctggcctcttttcattccccgagccgagcctccgaattctcag 45475990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 5721616 - 5721653
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||  |||||||||||    
T  5721616 caccttgtatttatcttttaaaaaaattaaatagaaca 5721653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 8102969 - 8103006
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  8102969 caccttgtatttatcttttaaaaaatttaaatataaca 8103006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11290241 - 11290278
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  11290241 caccttgtatttatcttttaaaaaatttaaataaaaca 11290278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 20003781 - 20003728
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| | ||||||||||||| |||||||||  |||||||||    
T  20003781 ctggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23941137 - 23941100
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  23941137 caccttgtatttatcttttaaaaaatttaaataaaaca 23941100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 41677142 - 41677106
Alignment:
Q  72 ggtctcttttcattctcagagccgagcctccgaattc 108  Q
    |||||||||||| || |||||||||||||||||||||    
T  41677142 ggtctcttttcactcacagagccgagcctccgaattc 41677106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 8171584 - 8171537
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  8171584 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 8171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 18776811 - 18776764
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  18776811 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 18776764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 26254050 - 26254097
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  26254050 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 26254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 29077277 - 29077324
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  29077277 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 29077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 10329380 - 10329327
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||||||||||| || ||||||||||    
T  10329380 ctggcctcttttcattcccagagccgagcctccgaattcttaggaacggccctg 10329327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 12596260 - 12596207
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  12596260 ctggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 12596207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 20091250 - 20091197
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| ||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  20091250 ctggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 20091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 28749843 - 28749895
Alignment:
Q  71 tggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||||||| |||||||||||||||||||| ||||  |||||||||    
T  28749843 tggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 29077356 - 29077404
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  29077356 ctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29077404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 48983804 - 48983756
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  48983804 ctcttttcattctcagagccgagcctccgaattcttagggacggccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 19692151 - 19692198
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  19692151 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 19692198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 23551041 - 23551002
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattct 109  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  23551041 ctggcctcttttcattctcagagccgagcctccgaattct 23551002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 33162384 - 33162350
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||||||||||||||||||||||||||||||||    
T  33162384 caccttgtatttatcttttaaaaaatataaataga 33162350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 2611307 - 2611270
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  2611307 caccttgtatttatcttttaaaaaatttaaatagaaca 2611270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 6765726 - 6765689
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  6765726 caccttgtatttatcttttaaaaaatttaaatagaaca 6765689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 8171505 - 8171468
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||||||||||| |||||||||||||||||||||||||    
T  8171505 ctcttttcattcccagagccgagcctccgaattctcag 8171468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10329455 - 10329418
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  10329455 caccttatatttatcttttaaaaaatataaatagaaca 10329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 10955541 - 10955578
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  10955541 caccttatatttatcttttaaaaaatataaatagaaca 10955578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 12596332 - 12596295
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||| |||||||||||||||||||    
T  12596332 caccttgtatttatctttaaaaaaatataaatagaaca 12596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 24525730 - 24525693
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  24525730 caccttatatttatcttttaaaaaatataaatagaaca 24525693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 27237468 - 27237431
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  27237468 caccttgtatttatcttttaaaaaatttaaatagaaca 27237431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 8239751 - 8239791
Alignment:
Q  11 tatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  8239751 tatttattttttaaaaaatataaatagaacattactctttt 8239791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 18776731 - 18776683
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||  |||||||||||||||||||||||||  |||||||||    
T  18776731 ctcttttcatttccagagccgagcctccgaattctcagggacggccctg 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 28749766 - 28749801
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28749766 caccttgtatttatcttttcaaaaatataaatagaa 28749801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38414924 - 38414885
Alignment:
Q  1 cgtcaccttgtatttatcttttaaaaaatataaatagaac 40  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  38414924 cgtcaccttatatttatcttttaaaaaatacaaatagaac 38414885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 20091326 - 20091292
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  20091326 caccttatatttatcttttaaaaaatataaataga 20091292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 24525647 - 24525613
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattct 109  Q
    |||||||||||| ||||||||||||||||||||||    
T  24525647 ctcttttcattcccagagccgagcctccgaattct 24525613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 48983889 - 48983855
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  48983889 caccttatatttatcttttaaaaaatataaataga 48983855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 7398508 - 7398545
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  7398508 caccttgtatttatctttcaaaaaatttaaatagaaca 7398545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 12419536 - 12419503
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||| |||||||||||    
T  12419536 ttgtatttatcttttaaaaaatttaaatagaaca 12419503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 21763628 - 21763595
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||| |||||||||||    
T  21763628 ttgtatttatcttttaaaaaatttaaatagaaca 21763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 23744853 - 23744890
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  23744853 caccttgtatttatcttttaaaaaatttaattagaaca 23744890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 23859134 - 23859167
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||| |||||||||||    
T  23859134 ttgtatttatcttttaaaaaatttaaatagaaca 23859167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 25010558 - 25010611
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||  |||||||||||||||||||||| ||  |||||||||    
T  25010558 ctggcctcttttcatttccagagccgagcctccgaattcttagggacggccctg 25010611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 26254130 - 26254167
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||||||||||| || ||||||||||||||||||||||    
T  26254130 ctcttttcattcccaaagccgagcctccgaattctcag 26254167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 12981384 - 12981420
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||  |||||||||||    
T  12981384 accttgtatttatcttttaaaaaaattaaatagaaca 12981420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 10978962 - 10979009
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  10978962 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 10979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 13460269 - 13460308
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacact 43  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13460269 caccttgtatttatcttttaaaaaatataaatagaacact 13460308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 48209302 - 48209349
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  48209302 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 48209349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 54780839 - 54780886
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  54780839 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 54780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 1105595 - 1105641
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||    
T  1105595 accttgtatttatcttttaaaaaatataaatagaacatcactctttt 1105641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 9578708 - 9578662
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  9578708 accttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 38209636 - 38209590
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||    
T  38209636 caccttgtatttatcttttaaaaaatataaatagaacattgctcttt 38209590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 2790712 - 2790659
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||||||||| |||||||||||||||||||||| ||  |||||||||    
T  2790712 ctggtctcttttcattcccagagccgagcctccgaattcttagagacggccctg 2790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10428242 - 10428205
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10428242 caccttgtatttatcttttaaaaaatataaatagaaca 10428205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 17679536 - 17679589
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||||||||| |||| ||||||||||||||||||||  |||||||||    
T  17679536 ctggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 32915447 - 32915484
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32915447 caccttgtatttatcttttaaaaaatataaatagaaca 32915484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 32915522 - 32915575
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  32915522 ctggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 32915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 37514721 - 37514758
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37514721 caccttgtatttatcttttaaaaaatataaatagaaca 37514758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 47129049 - 47129086
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47129049 caccttgtatttatcttttaaaaaatataaatagaaca 47129086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 48209383 - 48209436
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||||| || |||||||||||||||||||||||||  |||||||||    
T  48209383 ctggtctcttttcactcccagagccgagcctccgaattctcagggacggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 55255394 - 55255447
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| ||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  55255394 ctggcctcttttcattttcagagccgagcctccgaattctcagggacggccctg 55255447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 5128887 - 5128852
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  5128887 caccttgtatttatcttttaaaaaatataaatagaa 5128852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 17679462 - 17679497
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  17679462 caccttgtatttatcttttaaaaaatataaatagaa 17679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 19498564 - 19498611
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  19498564 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 19498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 32128646 - 32128693
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  32128646 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 32128693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 34768619 - 34768572
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  34768619 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 34768572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 37777268 - 37777221
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  37777268 caccttatatttatcttttaaaaaatataaatagaacattactttttt 37777221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 43455576 - 43455529
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  43455576 caccttatatttatcttttaaaaaatataaatagaacattgctctttt 43455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 51691960 - 51691913
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||    
T  51691960 caccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 55255319 - 55255366
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||| ||||| | |||||||    
T  55255319 caccttgtatttatcttttaaaaaatataaatggaacattgctctttt 55255366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 34027641 - 34027678
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  34027641 caccttatatttatcttttaaaaaatataaatagaaca 34027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 34027715 - 34027768
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||||||||||| ||  |||||||||    
T  34027715 ctggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 34027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 36118503 - 36118466
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  36118503 caccttgtatttatcttttaaaaaatttaaatagaaca 36118466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 47129123 - 47129180
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctgactg 127  Q
    |||| |||||||||||  |||||||||||||||||||||||||  ||||| |||||||    
T  47129123 ctggcctcttttcatttccagagccgagcctccgaattctcagggacggctctgactg 47129180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 52468348 - 52468385
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  52468348 caccttgtatttatcttttaaaaaatttaaatagaaca 52468385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 54780915 - 54780968
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| ||||||| |||||||||||||||||  |||||||||    
T  54780915 ctggcctcttttcattcccagagccaagcctccgaattctcagggacggccctg 54780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 2790785 - 2790749
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||| |||||||||||||||||||||||||||||||    
T  2790785 accttatatttatcttttaaaaaatataaatagaaca 2790749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 15735155 - 15735191
Alignment:
Q  7 cttgtatttatcttttaaaaaatataaatagaacact 43  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15735155 cttgtatttatcttttaaaaaatttaaatagaacact 15735191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 16922367 - 16922327
Alignment:
Q  11 tatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  16922367 tatttatcttttaaaaaatataaatagaacattgctctttt 16922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 54083208 - 54083176
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaatt 107  Q
    |||||||||||||||||||||||||||||||||    
T  54083208 ctcttttcattctcagagccgagcctccgaatt 54083176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 2135366 - 2135331
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    |||||||||||||||||||||||||| |||||||||    
T  2135366 caccttgtatttatcttttaaaaaatttaaatagaa 2135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 10428164 - 10428129
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctc 110  Q
    |||||||||||| |||||||||||||||||||||||    
T  10428164 ctcttttcattcccagagccgagcctccgaattctc 10428129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 27112090 - 27112129
Alignment:
Q  2 gtcaccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  27112090 gtcaccttgtatttatcttttaaaaaatttaaattgaaca 27112129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 38352232 - 38352197
Alignment:
Q  74 tctcttttcattctcagagccgagcctccgaattct 109  Q
    ||||||||||||| ||||||||||||||||||||||    
T  38352232 tctcttttcattcccagagccgagcctccgaattct 38352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23508556 - 23508518
Alignment:
Q  4 caccttgtatttatcttttaaaaaa-tataaatagaaca 41  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  23508556 caccttgtatttatcttttaaaaaattataaatagaaca 23508518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 24614018 - 24614052
Alignment:
Q  7 cttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||| |||||||||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaaca 24614052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 24969489 - 24969523
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  24969489 caccttatatttatcttttaaaaaatataaataga 24969523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 35779370 - 35779325
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||||    
T  35779370 caccttgtatttatcttttaaaaaatat-aatagaacattgctcttt 35779325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 38352310 - 38352276
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  38352310 caccttatatttatcttttaaaaaatataaataga 38352276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 54083287 - 54083253
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  54083287 caccttatatttatcttttaaaaaatataaataga 54083253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 5128811 - 5128758
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| ||||||||||||||  |||||||||  |||||||||    
T  5128811 ctggcctcttttcattcccagagccgagcctctaaattctcagggacggccctg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16882440 - 16882403
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  16882440 caccttatatttatcttttaaaaagtataaatagaaca 16882403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 16922298 - 16922245
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||||||||| || || ||||||||| |||||||||  |||||||||    
T  16922298 ctggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 24969738 - 24969787
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||||||||||| ||||| |||||||||||||||| ||  ||||||||||    
T  24969738 ctcttttcattcccagagtcgagcctccgaattcttagggacggccctga 24969787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 34768540 - 34768503
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||||||||||| || ||||||||||||||||||||||    
T  34768540 ctcttttcattcccaaagccgagcctccgaattctcag 34768503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 36178734 - 36178771
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  36178734 caccttgtatttatcttttaaataatttaaatagaaca 36178771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39329437 - 39329400
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  39329437 caccttgtatttatcttttaaaaaatttaaagagaaca 39329400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 39655295 - 39655262
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||| |||||||||||    
T  39655295 ttgtatttatcttttaaaaaatttaaatagaaca 39655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 1105673 - 1105709
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctca 111  Q
    |||||||||||| |||||||||||||| |||||||||    
T  1105673 ctcttttcattcccagagccgagcctctgaattctca 1105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 13460312 - 13460364
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctgactg 127  Q
    ||||||| |||| ||||| ||||||||||||||||||   |||||||||||||    
T  13460312 ctctttttattcccagagtcgagcctccgaattctcaaggacggccctgactg 13460364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 16845083 - 16845131
Alignment:
Q  4 caccttgtatttatctttt-aaaaaatataaatagaacactactctttt 51  Q
    |||||| |||||||||||| ||||||||||||||||||| | |||||||    
T  16845083 caccttatatttatcttttaaaaaaatataaatagaacattgctctttt 16845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 30507162 - 30507130
Alignment:
Q  9 tgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||| |||||||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaaca 30507130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 37777188 - 37777156
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaatt 107  Q
    |||||||||||| ||||||||||||||||||||    
T  37777188 ctcttttcattcccagagccgagcctccgaatt 37777156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 51964770 - 51964820
Alignment:
Q  4 caccttgtatttatctttt---aaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||   ||||||||||||||||||| | |||||||    
T  51964770 caccttgtatttatctttttaaaaaaaatataaatagaacattgctctttt 51964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 5027617 - 5027664
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  5027617 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 5027664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 5316748 - 5316795
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  5316748 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 5316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 16140123 - 16140170
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  16140123 caccttgtatttatcttttaaaaaatataaatagaacatcactctttt 16140170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 23185495 - 23185542
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  23185495 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 23185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 44655809 - 44655856
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  44655809 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 44655856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 50881498 - 50881545
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  50881498 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 50881545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 44655883 - 44655937
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    ||||||||||||||||  |||||||||||||||||||||||||  ||||||||||    
T  44655883 ctggtctcttttcatttccagagccgagcctccgaattctcagggacggccctga 44655937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 3406486 - 3406523
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3406486 caccttgtatttatcttttaaaaaatataaatagaaca 3406523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 3440334 - 3440297
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3440334 caccttgtatttatcttttaaaaaatataaatagaaca 3440297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 4971662 - 4971617
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||    
T  4971662 accttgtatttatcttttaaaaaatataaatagaacattgctcttt 4971617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 6771859 - 6771896
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6771859 caccttgtatttatcttttaaaaaatataaatagaaca 6771896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 6771936 - 6771989
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  6771936 ctggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 14146368 - 14146405
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14146368 caccttgtatttatcttttaaaaaatataaatagaaca 14146405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 21740905 - 21740864
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctca 111  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  21740905 ctggcctcttttcattctcagagccgagcctccgaattctca 21740864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 27906774 - 27906646
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactcttttnnnnnnnnntatattttg---------ctggtctcttttcattctcagagcc 94  Q
    |||||||||||||||||||||||||||||||| ||||| | |||||||         ||| |||||         |||| ||||||||||| ||||||||    
T  27906774 caccttgtatttatcttttaaaaaatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagcc 27906675  T
Q  95 gagcctccgaattctcagcaacggccctg 123  Q
    ||||||||||||||||||  |||||||||    
T  27906674 gagcctccgaattctcagggacggccctg 27906646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 22865503 - 22865459
Alignment:
Q  7 cttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  22865503 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 22865459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 6889683 - 6889726
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  6889683 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 6889726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 6891529 - 6891572
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  6891529 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 6891572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 19955859 - 19955898
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattct 109  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  19955859 ctggcctcttttcattctcagagccgagcctccgaattct 19955898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 21740982 - 21740935
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||    
T  21740982 caccttgtatttatcttttaaaaaatacaaatagaacattgctctttt 21740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 1366923 - 1366886
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  1366923 caccttatatttatcttttaaaaaatataaatagaaca 1366886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 9173068 - 9173031
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9173068 caccttatatttatcttttaaaaaatataaatagaaca 9173031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 9181050 - 9181013
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9181050 caccttatatttatcttttaaaaaatataaatagaaca 9181013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 14146442 - 14146495
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| ||||||||||||  ||||||||||||||||||||||||  |||||||||    
T  14146442 ctggcctcttttcattccaagagccgagcctccgaattctcagggacggccctg 14146495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 16140202 - 16140239
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||||||||||| |||||||||||||||||||||||||    
T  16140202 ctcttttcattcccagagccgagcctccgaattctcag 16140239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17169024 - 17169061
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  17169024 caccttatatttatcttttaaaaaatataaatagaaca 17169061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 23185589 - 23185626
Alignment:
Q  90 gagccgagcctccgaattctcagcaacggccctgactg 127  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  23185589 gagccgagcctccgaattctcaggaacggccctgactg 23185626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 27559705 - 27559742
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  27559705 caccttatatttatcttttaaaaaatataaatagaaca 27559742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 38547081 - 38547044
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  38547081 caccttgtatttatcttttaaaaaatttaaatagaaca 38547044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 40501755 - 40501706
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||||||||||||||||| |||||||||||||||| ||  ||||||||||    
T  40501755 ctcttttcattctcagagtcgagcctccgaattcttagggacggccctga 40501706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 41697178 - 41697145
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||    
T  41697178 ttgtatttatcttttaaaaaatataaatagaaca 41697145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 9172988 - 9172940
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||| ||  |||||||||    
T  9172988 ctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 9180970 - 9180922
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||| ||  |||||||||    
T  9180970 ctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 22865426 - 22865378
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||| ||||||||||||||||  |||||||||    
T  22865426 ctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 38853590 - 38853629
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacact 43  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  38853590 caccttgtatttatcatttaaaaaatttaaatagaacact 38853629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 40501835 - 40501788
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    |||||| |||||||||||||||||||||||||||| || |||| ||||    
T  40501835 caccttatatttatcttttaaaaaatataaatagatcattactttttt 40501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 44895714 - 44895748
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaataga 38  Q
    |||||| ||||||||||||||||||||||||||||    
T  44895714 caccttatatttatcttttaaaaaatataaataga 44895748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 50881571 - 50881613
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcag 112  Q
    |||| |||||||||||  |||||||||||||||||||||||||    
T  50881571 ctggcctcttttcatttccagagccgagcctccgaattctcag 50881613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 5027693 - 5027746
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| | ||| |||||||||||||||||||  |||||||||    
T  5027693 ctggcctcttttcattccccgagtcgagcctccgaattctcagggacggccctg 5027746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 13913445 - 13913412
Alignment:
Q  76 tcttttcattctcagagccgagcctccgaattct 109  Q
    ||||||||||||||||||| ||||||||||||||    
T  13913445 tcttttcattctcagagccaagcctccgaattct 13913412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 17169103 - 17169152
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctga 124  Q
    |||||||||||  |||||||||||||||||||||| ||  ||||||||||    
T  17169103 ctcttttcatttccagagccgagcctccgaattcttagggacggccctga 17169152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 17322664 - 17322631
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||| |||||||||||||||||||    
T  17322664 ttgtatttatctttaaaaaaatataaatagaaca 17322631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 19955786 - 19955819
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaataga 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  19955786 accttatatttatcttttaaaaaatataaataga 19955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 45758562 - 45758599
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  45758562 caccttgcatttatcttttaaaaaatttaaatagaaca 45758599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 51607484 - 51607447
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  51607484 caccttatatttatcttttaaaaaatataaataaaaca 51607447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 6889757 - 6889789
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaatt 107  Q
    ||||||||||||||||| |||||||||||||||    
T  6889757 ctcttttcattctcagaaccgagcctccgaatt 6889789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 6891603 - 6891635
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaatt 107  Q
    ||||||||||||||||| |||||||||||||||    
T  6891603 ctcttttcattctcagaaccgagcctccgaatt 6891635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 51607406 - 51607374
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaatt 107  Q
    |||||||||||| ||||||||||||||||||||    
T  51607406 ctcttttcattcccagagccgagcctccgaatt 51607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 1403 - 1447
Alignment:
Q  7 cttgtatttatcttttaaaaaatataaatagaacactactctttt 51  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  1403 cttgtatttatcttttaaaaaatataaatagaacagtgctctttt 1447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 1479 - 1527
Alignment:
Q  75 ctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  1479 ctcttttcattcccagagccgagcctccgaattctcagggacggccctg 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 304 - 267
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  304 caccttgtatttatcttttaaaaaatttaaatagaaca 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 16123 - 16168
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaacactactcttt 50  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaacatttctcttt 16168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 38982 - 39019
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  38982 caccttgtatttatcttttaaaaaatttaaatagaaca 39019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 106595 - 106632
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||| |||||||||||||||||||||||||||||||    
T  106595 caccttatatttatcttttaaaaaatataaatagaaca 106632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 106670 - 106723
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| ||||||||||||||| |||||| ||  |||||||||    
T  106670 ctggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 106723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 183121 - 183154
Alignment:
Q  8 ttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||||||||||||    
T  183121 ttgtatttatcttttaaaaaatataaatagaaca 183154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 183191 - 183244
Alignment:
Q  70 ctggtctcttttcattctcagagccgagcctccgaattctcagcaacggccctg 123  Q
    |||| |||||||||||| |||||||||||||| ||||| ||||  |||||||||    
T  183191 ctggcctcttttcattcccagagccgagcctctgaattttcagggacggccctg 183244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 173555 - 173519
Alignment:
Q  5 accttgtatttatcttttaaaaaatataaatagaaca 41  Q
    ||||||||||||||||||||||||| |||||||||||    
T  173555 accttgtatttatcttttaaaaaatttaaatagaaca 173519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 24039 - 24004
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaa 39  Q
    |||||||||||||||||||||||||| |||||||||    
T  24039 caccttgtatttatcttttaaaaaatttaaatagaa 24004  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 206535 - 206498
Alignment:
Q  4 caccttgtatttatcttttaaaaaatataaatagaaca 41  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  206535 caccttgtatttatcttttacaaaatttaaatagaaca 206498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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