View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17175_low_1 (Length: 325)
Name: NF17175_low_1
Description: NF17175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17175_low_1 |
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Alignment Details
Target: chr1 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42609118 - 42608975
Alignment:
| Q |
1 |
aaaattaggtcacctggtgaggactgtgataaggttttcacagcaatgtgtgatggaaggtttattgatcccatgttggattgtctaaaggagtggaatg |
100 |
Q |
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| T |
42609118 |
aaaattaggtcacctggtgaggactgtgataaggttttcacagcaatgtgtgatggaaggtttattgatcccatgttggattgtctaaaggagtggaatg |
42609019 |
T |
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| Q |
101 |
gtgttcctctacctatctgctaggattgtgctactctaatgtaa |
144 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42609018 |
gtgttcctctacctatctgctaggattgtgctactctaatgtaa |
42608975 |
T |
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