View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17176_low_11 (Length: 401)

Name: NF17176_low_11
Description: NF17176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17176_low_11
NF17176_low_11
[»] chr4 (74 HSPs)
chr4 (248-391)||(12758909-12759054)
chr4 (109-230)||(13168845-13168965)
chr4 (109-230)||(47465279-47465401)
chr4 (109-230)||(45617563-45617683)
chr4 (110-230)||(54442045-54442165)
chr4 (109-230)||(49249520-49249642)
chr4 (109-230)||(17697256-17697379)
chr4 (109-230)||(22324501-22324624)
chr4 (109-230)||(4758553-4758675)
chr4 (109-230)||(19495472-19495594)
chr4 (109-230)||(27487610-27487732)
chr4 (107-230)||(19042095-19042219)
chr4 (109-230)||(6810572-6810694)
chr4 (109-230)||(8401266-8401388)
chr4 (109-230)||(9150783-9150905)
chr4 (109-230)||(19203690-19203812)
chr4 (109-230)||(18638235-18638357)
chr4 (109-227)||(15323493-15323613)
chr4 (109-209)||(49236428-49236529)
chr4 (166-230)||(21822623-21822687)
chr4 (330-386)||(22123986-22124042)
chr4 (119-230)||(23573223-23573335)
chr4 (109-225)||(11347283-11347400)
chr4 (120-224)||(36498274-36498379)
chr4 (166-230)||(13168942-13169006)
chr4 (166-230)||(17697215-17697279)
chr4 (166-230)||(19042194-19042258)
chr4 (166-230)||(47465238-47465302)
chr4 (166-230)||(49633096-49633160)
chr4 (110-189)||(13578767-13578846)
chr4 (120-230)||(19675722-19675833)
chr4 (109-199)||(10264500-10264590)
chr4 (109-230)||(20570001-20570125)
chr4 (109-230)||(43071075-43071197)
chr4 (166-230)||(8401365-8401429)
chr4 (110-150)||(19291488-19291528)
chr4 (166-230)||(28755245-28755309)
chr4 (166-230)||(49236387-49236451)
chr4 (166-230)||(54442143-54442207)
chr4 (109-230)||(12294464-12294587)
chr4 (109-230)||(28755146-28755268)
chr4 (108-150)||(49633078-49633120)
chr4 (110-147)||(6458068-6458105)
chr4 (109-150)||(9663346-9663387)
chr4 (109-150)||(21822605-21822646)
chr4 (109-150)||(40269696-40269737)
chr4 (170-230)||(32559-32619)
chr4 (166-230)||(6378433-6378497)
chr4 (166-230)||(6458083-6458147)
chr4 (166-230)||(9663364-9663428)
chr4 (166-230)||(19203649-19203713)
chr4 (166-230)||(19495571-19495635)
chr4 (111-230)||(26717148-26717268)
chr4 (182-230)||(36498387-36498435)
chr4 (110-150)||(39489260-39489300)
chr4 (166-230)||(40269714-40269778)
chr4 (162-230)||(49632982-49633050)
chr4 (111-150)||(32537-32576)
chr4 (107-150)||(6378472-6378515)
chr4 (111-150)||(15658903-15658942)
chr4 (111-150)||(23962807-23962846)
chr4 (162-216)||(6457994-6458048)
chr4 (192-230)||(39537494-39537532)
chr4 (109-147)||(47283483-47283521)
chr4 (111-230)||(18909662-18909782)
chr4 (166-230)||(4758512-4758576)
chr4 (166-230)||(11347377-11347441)
chr4 (166-230)||(15323590-15323654)
chr4 (166-230)||(18909619-18909683)
chr4 (111-188)||(38095140-38095216)
chr4 (166-230)||(49249479-49249543)
chr4 (167-230)||(27487569-27487632)
chr4 (166-230)||(12294424-12294487)
chr4 (166-230)||(20569960-20570024)
[»] chr8 (67 HSPs)
chr8 (109-230)||(18609372-18609493)
chr8 (109-230)||(43681276-43681398)
chr8 (109-230)||(16669317-16669438)
chr8 (109-230)||(10761030-10761152)
chr8 (109-230)||(22980911-22981033)
chr8 (109-230)||(5385631-5385753)
chr8 (109-230)||(23352061-23352183)
chr8 (111-230)||(28004744-28004865)
chr8 (111-230)||(28062046-28062167)
chr8 (111-230)||(21589943-21590063)
chr8 (108-230)||(23382733-23382857)
chr8 (111-230)||(17159172-17159291)
chr8 (109-230)||(42933108-42933230)
chr8 (109-230)||(116719-116842)
chr8 (109-230)||(6163024-6163147)
chr8 (114-230)||(11296560-11296677)
chr8 (166-230)||(222677-222741)
chr8 (166-230)||(691832-691896)
chr8 (166-230)||(736300-736364)
chr8 (166-230)||(860195-860259)
chr8 (109-230)||(2672091-2672200)
chr8 (109-230)||(34618071-34618193)
chr8 (110-230)||(7595333-7595454)
chr8 (109-230)||(7910229-7910350)
chr8 (166-230)||(7595291-7595355)
chr8 (166-230)||(40774009-40774073)
chr8 (110-209)||(36574486-36574585)
chr8 (166-230)||(16669415-16669479)
chr8 (166-230)||(17749922-17749986)
chr8 (166-230)||(23352160-23352224)
chr8 (166-230)||(23382833-23382897)
chr8 (166-230)||(36574563-36574627)
chr8 (170-230)||(37597763-37597823)
chr8 (111-150)||(28898881-28898920)
chr8 (111-150)||(31957405-31957444)
chr8 (166-230)||(116678-116742)
chr8 (111-147)||(9500903-9500939)
chr8 (166-230)||(18609331-18609395)
chr8 (110-150)||(21127470-21127510)
chr8 (166-230)||(21127488-21127552)
chr8 (110-150)||(40773991-40774031)
chr8 (109-144)||(222718-222753)
chr8 (109-144)||(691873-691908)
chr8 (109-144)||(736341-736376)
chr8 (109-144)||(860236-860271)
chr8 (167-230)||(5385590-5385653)
chr8 (159-230)||(15113936-15114007)
chr8 (111-150)||(17749965-17750004)
chr8 (111-150)||(18845146-18845185)
chr8 (111-149)||(12610821-12610859)
chr8 (169-230)||(2672050-2672111)
chr8 (110-224)||(31951254-31951370)
chr8 (166-230)||(9500918-9500982)
chr8 (166-230)||(17159270-17159334)
chr8 (166-230)||(18845103-18845167)
chr8 (166-230)||(28004701-28004765)
chr8 (166-230)||(28062003-28062067)
chr8 (166-230)||(42933207-42933271)
chr8 (166-226)||(43681375-43681435)
chr8 (191-230)||(23943166-23943205)
chr8 (166-228)||(28898899-28898961)
chr8 (166-230)||(6162983-6163047)
chr8 (166-230)||(10760990-10761053)
chr8 (166-230)||(21589900-21589964)
chr8 (166-206)||(31951348-31951388)
chr8 (166-230)||(31957363-31957426)
chr8 (121-149)||(39517907-39517935)
[»] chr1 (71 HSPs)
chr1 (109-230)||(5246374-5246495)
chr1 (107-230)||(6953980-6954104)
chr1 (109-230)||(11586331-11586453)
chr1 (109-230)||(39935033-39935155)
chr1 (109-230)||(9403424-9403545)
chr1 (110-230)||(9631758-9631879)
chr1 (109-230)||(26712071-26712192)
chr1 (111-230)||(16985294-16985414)
chr1 (107-230)||(22374623-22374747)
chr1 (109-230)||(48044745-48044868)
chr1 (109-230)||(40633149-40633271)
chr1 (112-230)||(1819188-1819307)
chr1 (107-230)||(13430351-13430473)
chr1 (109-230)||(1340743-1340865)
chr1 (110-230)||(12886825-12886935)
chr1 (109-230)||(25395479-25395601)
chr1 (109-230)||(29525683-29525805)
chr1 (108-230)||(45323250-45323371)
chr1 (111-223)||(51166785-51166898)
chr1 (109-230)||(12163267-12163387)
chr1 (166-230)||(22374722-22374786)
chr1 (109-230)||(1613693-1613817)
chr1 (109-230)||(15541490-15541612)
chr1 (111-230)||(24169168-24169288)
chr1 (125-230)||(15734679-15734785)
chr1 (109-230)||(38601231-38601353)
chr1 (109-209)||(15734576-15734677)
chr1 (166-230)||(12886913-12886977)
chr1 (166-230)||(15734535-15734599)
chr1 (159-230)||(37216393-37216464)
chr1 (164-230)||(35552137-35552203)
chr1 (109-150)||(6587621-6587662)
chr1 (109-230)||(32116275-32116394)
chr1 (166-230)||(1340842-1340906)
chr1 (166-230)||(6587639-6587703)
chr1 (166-230)||(13430312-13430376)
chr1 (166-230)||(29641752-29641816)
chr1 (166-230)||(39934992-39935056)
chr1 (111-150)||(16087290-16087329)
chr1 (159-230)||(27270398-27270469)
chr1 (111-150)||(29641734-29641773)
chr1 (111-150)||(44345106-44345145)
chr1 (111-150)||(44545737-44545776)
chr1 (109-150)||(17889630-17889671)
chr1 (166-230)||(5246333-5246397)
chr1 (166-230)||(6953941-6954005)
chr1 (166-230)||(9403383-9403447)
chr1 (166-230)||(11586290-11586354)
chr1 (166-230)||(16985251-16985315)
chr1 (166-230)||(24169267-24169331)
chr1 (166-230)||(25395578-25395642)
chr1 (166-230)||(29525782-29525846)
chr1 (166-230)||(40633248-40633312)
chr1 (159-230)||(46173113-46173185)
chr1 (111-150)||(23284821-23284860)
chr1 (168-230)||(12163226-12163288)
chr1 (109-147)||(52881358-52881396)
chr1 (180-225)||(35552049-35552094)
chr1 (166-230)||(1613652-1613716)
chr1 (166-230)||(9631716-9631780)
chr1 (166-230)||(26712169-26712233)
chr1 (117-149)||(27322639-27322671)
chr1 (166-230)||(44545694-44545758)
chr1 (166-230)||(45323347-45323411)
chr1 (166-230)||(51166742-51166806)
chr1 (120-188)||(51238063-51238131)
chr1 (159-230)||(47675326-47675397)
chr1 (110-144)||(49613681-49613715)
chr1 (166-230)||(15541589-15541653)
chr1 (166-230)||(16087308-16087372)
chr1 (166-230)||(38601330-38601394)
[»] chr5 (78 HSPs)
chr5 (109-230)||(39886615-39886737)
chr5 (110-230)||(8405979-8406100)
chr5 (110-230)||(10690855-10690975)
chr5 (109-230)||(6143417-6143539)
chr5 (111-230)||(13952562-13952682)
chr5 (111-230)||(29690569-29690689)
chr5 (109-230)||(5081577-5081699)
chr5 (109-230)||(13892667-13892789)
chr5 (109-230)||(21262706-21262828)
chr5 (110-230)||(12369567-12369688)
chr5 (110-230)||(20352694-20352815)
chr5 (109-230)||(23294609-23294730)
chr5 (109-230)||(26404983-26405103)
chr5 (109-230)||(38678281-38678401)
chr5 (111-230)||(14946508-14946628)
chr5 (111-230)||(34974064-34974183)
chr5 (111-230)||(3922793-3922912)
chr5 (109-230)||(7884839-7884962)
chr5 (109-230)||(11762309-11762431)
chr5 (109-230)||(16867862-16867984)
chr5 (109-230)||(18618319-18618441)
chr5 (109-230)||(21000456-21000578)
chr5 (109-230)||(20884135-20884258)
chr5 (109-230)||(22634219-22634341)
chr5 (166-230)||(7884939-7885003)
chr5 (166-230)||(10690953-10691017)
chr5 (109-230)||(30126506-30126629)
chr5 (159-230)||(37064406-37064477)
chr5 (111-230)||(40616260-40616378)
chr5 (110-230)||(18805224-18805345)
chr5 (166-230)||(18805323-18805387)
chr5 (166-230)||(20352793-20352857)
chr5 (109-230)||(2841746-2841861)
chr5 (111-188)||(10831893-10831970)
chr5 (109-150)||(13003898-13003939)
chr5 (109-150)||(13078554-13078595)
chr5 (109-150)||(27451398-27451439)
chr5 (330-391)||(27706835-27706896)
chr5 (166-230)||(2841838-2841902)
chr5 (166-230)||(5081536-5081600)
chr5 (166-230)||(8406078-8406142)
chr5 (166-230)||(12369525-12369589)
chr5 (166-230)||(13892626-13892690)
chr5 (110-150)||(14435744-14435784)
chr5 (166-230)||(21262665-21262729)
chr5 (166-230)||(26006574-26006638)
chr5 (110-230)||(27316065-27316188)
chr5 (111-230)||(29989525-29989647)
chr5 (166-230)||(39886574-39886638)
chr5 (111-150)||(6802217-6802256)
chr5 (111-150)||(26006617-26006656)
chr5 (111-150)||(27830059-27830098)
chr5 (109-150)||(5105202-5105243)
chr5 (159-224)||(25881099-25881164)
chr5 (166-230)||(6143376-6143440)
chr5 (166-230)||(11762408-11762472)
chr5 (166-230)||(26404942-26405006)
chr5 (166-230)||(27451357-27451421)
chr5 (166-230)||(27830016-27830080)
chr5 (166-230)||(36873108-36873172)
chr5 (166-230)||(38678240-38678304)
chr5 (111-150)||(22833499-22833538)
chr5 (109-150)||(5824499-5824540)
chr5 (166-230)||(25591139-25591203)
chr5 (166-230)||(6802235-6802299)
chr5 (166-230)||(14946465-14946529)
chr5 (166-230)||(21000415-21000479)
chr5 (166-230)||(22634178-22634242)
chr5 (166-230)||(22833457-22833520)
chr5 (166-230)||(40616357-40616421)
chr5 (111-150)||(25591121-25591160)
chr5 (111-150)||(38941526-38941564)
chr5 (108-150)||(36873090-36873132)
chr5 (118-147)||(13079552-13079581)
chr5 (173-230)||(19635017-19635074)
chr5 (166-223)||(27316166-27316223)
chr5 (166-230)||(16867821-16867885)
chr5 (166-230)||(30126606-30126670)
[»] chr3 (74 HSPs)
chr3 (109-230)||(24721181-24721303)
chr3 (110-230)||(49817702-49817822)
chr3 (109-230)||(3526600-3526722)
chr3 (107-230)||(11914941-11915065)
chr3 (111-230)||(55120721-55120840)
chr3 (109-230)||(30751238-30751360)
chr3 (109-230)||(38560077-38560199)
chr3 (109-230)||(39825505-39825627)
chr3 (109-230)||(37585738-37585859)
chr3 (111-230)||(7014790-7014909)
chr3 (112-230)||(25024984-25025103)
chr3 (109-230)||(5154758-5154880)
chr3 (107-230)||(8127988-8128110)
chr3 (109-230)||(21802314-21802436)
chr3 (109-230)||(52866062-52866184)
chr3 (111-223)||(7731338-7731450)
chr3 (109-230)||(5047228-5047350)
chr3 (109-230)||(15539980-15540101)
chr3 (109-230)||(33312437-33312559)
chr3 (109-230)||(39937077-39937200)
chr3 (111-230)||(25484220-25484341)
chr3 (109-230)||(54014618-54014739)
chr3 (111-230)||(21015344-21015464)
chr3 (109-230)||(9268675-9268797)
chr3 (110-230)||(8764002-8764123)
chr3 (111-223)||(40003979-40004092)
chr3 (109-230)||(2986027-2986150)
chr3 (166-230)||(9268634-9268698)
chr3 (166-230)||(55120678-55120742)
chr3 (109-199)||(6019500-6019591)
chr3 (111-225)||(7862466-7862579)
chr3 (109-230)||(12998759-12998881)
chr3 (107-150)||(13207591-13207634)
chr3 (109-230)||(26996124-26996244)
chr3 (165-230)||(12998857-12998922)
chr3 (109-150)||(32858254-32858295)
chr3 (109-150)||(40717458-40717499)
chr3 (109-150)||(53050032-53050073)
chr3 (109-230)||(2148581-2148704)
chr3 (166-230)||(5047327-5047391)
chr3 (166-230)||(16343697-16343761)
chr3 (166-230)||(21802273-21802337)
chr3 (166-230)||(24721280-24721344)
chr3 (166-230)||(25484177-25484241)
chr3 (166-230)||(30751337-30751401)
chr3 (166-230)||(32858213-32858277)
chr3 (166-230)||(52866021-52866085)
chr3 (109-147)||(24234150-24234188)
chr3 (165-230)||(7014887-7014952)
chr3 (109-150)||(16871316-16871357)
chr3 (166-230)||(2985986-2986050)
chr3 (166-230)||(3526699-3526763)
chr3 (166-230)||(5154857-5154921)
chr3 (166-230)||(8127949-8128013)
chr3 (166-230)||(11914902-11914966)
chr3 (166-230)||(15539939-15540003)
chr3 (109-230)||(18546435-18546558)
chr3 (166-230)||(37585697-37585761)
chr3 (166-230)||(39825604-39825668)
chr3 (166-230)||(49817661-49817724)
chr3 (180-230)||(43674242-43674292)
chr3 (166-230)||(13207551-13207616)
chr3 (166-230)||(7731429-7731493)
chr3 (109-145)||(19271720-19271756)
chr3 (166-230)||(38560176-38560240)
chr3 (166-230)||(39937177-39937241)
chr3 (166-230)||(54014716-54014780)
chr3 (166-230)||(7862558-7862622)
chr3 (166-230)||(8763960-8764024)
chr3 (340-392)||(14746221-14746273)
chr3 (166-230)||(16871334-16871398)
chr3 (166-230)||(21015301-21015365)
chr3 (166-230)||(25025083-25025147)
chr3 (166-230)||(40003936-40004000)
[»] scaffold0199 (2 HSPs)
scaffold0199 (109-230)||(11944-12065)
scaffold0199 (166-230)||(11903-11967)
[»] chr2 (93 HSPs)
chr2 (109-230)||(20513771-20513892)
chr2 (109-230)||(25301411-25301534)
chr2 (107-230)||(36202220-36202343)
chr2 (110-230)||(25890650-25890771)
chr2 (107-230)||(12883182-12883306)
chr2 (111-230)||(5513587-5513707)
chr2 (110-230)||(20891657-20891777)
chr2 (109-230)||(18966741-18966863)
chr2 (109-230)||(20100820-20100942)
chr2 (111-230)||(34963414-34963534)
chr2 (111-230)||(39615644-39615764)
chr2 (117-230)||(396926-397040)
chr2 (109-230)||(5528980-5529108)
chr2 (109-230)||(20962146-20962268)
chr2 (109-230)||(44354004-44354126)
chr2 (114-230)||(1151215-1151332)
chr2 (111-231)||(1320707-1320828)
chr2 (113-230)||(43209236-43209353)
chr2 (111-230)||(27927037-27927157)
chr2 (109-230)||(22265237-22265360)
chr2 (109-230)||(9273637-9273759)
chr2 (109-230)||(13987871-13987993)
chr2 (109-230)||(13993769-13993891)
chr2 (110-230)||(30462243-30462364)
chr2 (111-230)||(1591932-1592052)
chr2 (166-230)||(12883143-12883207)
chr2 (107-230)||(14274325-14274448)
chr2 (166-230)||(36202181-36202245)
chr2 (116-230)||(24388713-24388828)
chr2 (109-230)||(7511408-7511530)
chr2 (109-230)||(7515692-7515814)
chr2 (109-230)||(13236833-13236957)
chr2 (109-230)||(20025422-20025544)
chr2 (109-230)||(28192358-28192480)
chr2 (107-230)||(5863286-5863411)
chr2 (166-230)||(5863247-5863311)
chr2 (110-230)||(6748808-6748926)
chr2 (109-188)||(8224491-8224571)
chr2 (109-230)||(22422862-22422985)
chr2 (109-230)||(24492553-24492675)
chr2 (166-230)||(40926839-40926903)
chr2 (159-230)||(3328991-3329062)
chr2 (159-230)||(42335961-42336032)
chr2 (109-150)||(18115449-18115490)
chr2 (109-149)||(2077186-2077226)
chr2 (107-230)||(2531927-2532050)
chr2 (166-230)||(5513544-5513608)
chr2 (166-230)||(7511507-7511571)
chr2 (166-230)||(7515791-7515855)
chr2 (166-230)||(14274286-14274350)
chr2 (166-230)||(18115408-18115472)
chr2 (166-230)||(18756827-18756891)
chr2 (166-230)||(20891755-20891819)
chr2 (166-230)||(20962105-20962169)
chr2 (166-230)||(24388666-24388729)
chr2 (166-230)||(26502425-26502489)
chr2 (166-230)||(30462342-30462406)
chr2 (111-230)||(35741110-35741227)
chr2 (110-150)||(40926821-40926861)
chr2 (109-230)||(39257232-39257355)
chr2 (166-224)||(6748904-6748962)
chr2 (109-147)||(33216533-33216571)
chr2 (108-150)||(35192283-35192325)
chr2 (109-150)||(18756868-18756909)
chr2 (109-150)||(18817330-18817371)
chr2 (166-230)||(22265196-22265261)
chr2 (166-230)||(1151314-1151378)
chr2 (166-230)||(1320664-1320728)
chr2 (166-230)||(5529085-5529149)
chr2 (166-230)||(18817348-18817412)
chr2 (166-230)||(20100919-20100983)
chr2 (166-230)||(20513730-20513794)
chr2 (166-230)||(28192457-28192521)
chr2 (166-230)||(33216548-33216612)
chr2 (109-147)||(8972811-8972849)
chr2 (166-223)||(25890615-25890672)
chr2 (166-230)||(8224548-8224612)
chr2 (166-230)||(8972826-8972890)
chr2 (166-230)||(18755470-18755534)
chr2 (166-230)||(18966840-18966904)
chr2 (166-230)||(22422821-22422885)
chr2 (166-230)||(34963513-34963577)
chr2 (166-230)||(39257191-39257255)
chr2 (166-230)||(39615743-39615807)
chr2 (166-230)||(44353963-44354027)
chr2 (166-225)||(1591894-1591953)
chr2 (166-229)||(20025382-20025445)
chr2 (109-147)||(18755511-18755549)
chr2 (166-223)||(2077203-2077260)
chr2 (109-150)||(26502466-26502507)
chr2 (166-230)||(9273596-9273660)
chr2 (166-230)||(25301370-25301434)
chr2 (182-230)||(43209353-43209401)
[»] scaffold0734 (2 HSPs)
scaffold0734 (111-230)||(3075-3195)
scaffold0734 (166-230)||(3032-3096)
[»] chr7 (85 HSPs)
chr7 (107-230)||(41877147-41877271)
chr7 (109-230)||(15984241-15984364)
chr7 (109-230)||(16274571-16274693)
chr7 (109-230)||(17358065-17358187)
chr7 (109-230)||(46483724-46483846)
chr7 (109-229)||(37101413-37101534)
chr7 (109-230)||(33582843-33582966)
chr7 (111-230)||(43742083-43742203)
chr7 (111-230)||(3158447-3158565)
chr7 (109-227)||(7881518-7881637)
chr7 (109-223)||(38651853-38651968)
chr7 (109-230)||(4098175-4098297)
chr7 (109-230)||(11666817-11666939)
chr7 (109-230)||(12180032-12180154)
chr7 (109-230)||(14542712-14542834)
chr7 (109-230)||(22947428-22947550)
chr7 (109-230)||(31079212-31079334)
chr7 (110-230)||(24438719-24438840)
chr7 (109-230)||(20033765-20033887)
chr7 (109-230)||(30631428-30631551)
chr7 (109-230)||(18318565-18318688)
chr7 (109-230)||(30441285-30441407)
chr7 (109-230)||(30538239-30538361)
chr7 (109-230)||(41745150-41745272)
chr7 (109-230)||(44205706-44205828)
chr7 (160-230)||(47668189-47668259)
chr7 (111-207)||(24932036-24932133)
chr7 (166-230)||(46134786-46134850)
chr7 (108-230)||(37391241-37391364)
chr7 (109-230)||(38415958-38416079)
chr7 (109-230)||(39459407-39459527)
chr7 (166-230)||(3216110-3216174)
chr7 (166-230)||(14542671-14542735)
chr7 (166-230)||(33582943-33583007)
chr7 (166-230)||(43742040-43742104)
chr7 (111-187)||(43989146-43989222)
chr7 (107-230)||(46134688-46134811)
chr7 (110-189)||(9712500-9712579)
chr7 (121-230)||(25677153-25677263)
chr7 (166-230)||(4098134-4098198)
chr7 (111-230)||(15129671-15129793)
chr7 (166-230)||(18449419-18449483)
chr7 (166-230)||(28311265-28311329)
chr7 (166-230)||(38651945-38652009)
chr7 (166-230)||(41877246-41877310)
chr7 (107-150)||(18024712-18024755)
chr7 (111-150)||(25728333-25728372)
chr7 (109-150)||(3216151-3216192)
chr7 (109-150)||(18449460-18449501)
chr7 (166-230)||(7881477-7881541)
chr7 (166-230)||(12179991-12180055)
chr7 (166-230)||(15984341-15984405)
chr7 (166-230)||(16274530-16274594)
chr7 (166-230)||(17358164-17358228)
chr7 (166-230)||(22947527-22947591)
chr7 (166-230)||(30441244-30441308)
chr7 (166-230)||(30538199-30538262)
chr7 (166-230)||(30631528-30631592)
chr7 (166-230)||(31643996-31644060)
chr7 (166-230)||(41745249-41745313)
chr7 (111-188)||(43991282-43991358)
chr7 (111-230)||(46944967-46945088)
chr7 (166-230)||(46945067-46945131)
chr7 (166-225)||(25728351-25728410)
chr7 (111-150)||(31644039-31644078)
chr7 (111-150)||(39868570-39868609)
chr7 (111-149)||(3687725-3687763)
chr7 (111-145)||(35077776-35077810)
chr7 (165-230)||(11469044-11469109)
chr7 (109-150)||(28311247-28311288)
chr7 (166-230)||(31298609-31298673)
chr7 (166-230)||(37101372-37101436)
chr7 (166-230)||(39459504-39459568)
chr7 (166-230)||(39868527-39868591)
chr7 (166-230)||(46483683-46483747)
chr7 (159-230)||(3687760-3687831)
chr7 (109-148)||(11469029-11469068)
chr7 (111-150)||(31298652-31298691)
chr7 (329-391)||(767783-767845)
chr7 (109-147)||(21872213-21872251)
chr7 (164-230)||(37446624-37446690)
chr7 (121-149)||(6369185-6369213)
chr7 (121-149)||(6377650-6377678)
chr7 (166-230)||(20033724-20033788)
chr7 (166-230)||(38416057-38416120)
[»] chr6 (52 HSPs)
chr6 (109-230)||(4407970-4408092)
chr6 (107-230)||(7850599-7850723)
chr6 (111-230)||(26908355-26908477)
chr6 (110-230)||(2255466-2255587)
chr6 (109-230)||(2965674-2965796)
chr6 (109-230)||(9964455-9964577)
chr6 (109-230)||(19591361-19591483)
chr6 (109-230)||(30240626-30240748)
chr6 (109-230)||(2039399-2039520)
chr6 (110-230)||(25948731-25948852)
chr6 (109-230)||(16127209-16127332)
chr6 (111-230)||(28038998-28039118)
chr6 (109-230)||(9887714-9887835)
chr6 (110-230)||(32276147-32276268)
chr6 (111-230)||(9865133-9865253)
chr6 (109-230)||(27660476-27660599)
chr6 (109-230)||(28228704-28228826)
chr6 (166-230)||(32276246-32276310)
chr6 (109-230)||(34101090-34101217)
chr6 (110-230)||(6176753-6176874)
chr6 (109-229)||(18699101-18699222)
chr6 (109-230)||(34204846-34204967)
chr6 (166-230)||(2255424-2255488)
chr6 (166-230)||(6176852-6176916)
chr6 (166-230)||(19591460-19591524)
chr6 (109-230)||(14597155-14597275)
chr6 (110-230)||(14349021-14349142)
chr6 (166-230)||(1414749-1414813)
chr6 (166-230)||(2965633-2965697)
chr6 (166-230)||(4407929-4407993)
chr6 (166-230)||(7314688-7314752)
chr6 (166-230)||(9865090-9865154)
chr6 (166-230)||(27660435-27660499)
chr6 (166-230)||(30240725-30240789)
chr6 (159-230)||(18771901-18771972)
chr6 (109-147)||(1414734-1414772)
chr6 (166-230)||(2039358-2039422)
chr6 (166-230)||(7850560-7850624)
chr6 (166-230)||(15502689-15502752)
chr6 (159-230)||(21382380-21382452)
chr6 (162-230)||(22043671-22043739)
chr6 (166-230)||(25948689-25948753)
chr6 (166-230)||(26908312-26908376)
chr6 (109-230)||(7314586-7314711)
chr6 (166-230)||(9964414-9964478)
chr6 (110-230)||(15502588-15502711)
chr6 (166-230)||(18699060-18699124)
chr6 (166-230)||(34204805-34204869)
chr6 (166-224)||(14348985-14349043)
chr6 (114-147)||(21200214-21200247)
chr6 (166-230)||(9887812-9887876)
chr6 (166-230)||(10738818-10738881)
[»] scaffold0235 (3 HSPs)
scaffold0235 (110-230)||(24294-24415)
scaffold0235 (121-230)||(12603-12713)
scaffold0235 (166-230)||(24252-24316)
[»] scaffold0035 (2 HSPs)
scaffold0035 (109-230)||(72282-72403)
scaffold0035 (165-230)||(72241-72306)
[»] scaffold0599 (2 HSPs)
scaffold0599 (107-230)||(6692-6816)
scaffold0599 (166-230)||(6653-6717)
[»] scaffold0001 (2 HSPs)
scaffold0001 (110-223)||(403536-403650)
scaffold0001 (166-230)||(403628-403692)
[»] scaffold0098 (2 HSPs)
scaffold0098 (109-230)||(4063-4184)
scaffold0098 (166-230)||(4022-4086)
[»] scaffold0023 (2 HSPs)
scaffold0023 (109-230)||(125377-125498)
scaffold0023 (166-230)||(125475-125539)
[»] scaffold0740 (2 HSPs)
scaffold0740 (109-230)||(2995-3117)
scaffold0740 (166-230)||(2954-3018)
[»] scaffold0555 (2 HSPs)
scaffold0555 (110-230)||(6788-6909)
scaffold0555 (166-230)||(6746-6810)
[»] scaffold0090 (2 HSPs)
scaffold0090 (111-230)||(15470-15590)
scaffold0090 (166-230)||(15427-15491)
[»] scaffold0420 (2 HSPs)
scaffold0420 (109-230)||(4305-4428)
scaffold0420 (166-230)||(4405-4469)
[»] scaffold0038 (1 HSPs)
scaffold0038 (109-230)||(29202-29324)
[»] scaffold0284 (1 HSPs)
scaffold0284 (159-230)||(3424-3495)
[»] scaffold0049 (4 HSPs)
scaffold0049 (109-230)||(57451-57572)
scaffold0049 (166-230)||(57549-57613)
scaffold0049 (166-230)||(62245-62309)
scaffold0049 (109-150)||(62228-62268)
[»] scaffold0031 (2 HSPs)
scaffold0031 (107-150)||(92807-92850)
scaffold0031 (166-230)||(92825-92889)
[»] scaffold0009 (3 HSPs)
scaffold0009 (110-230)||(24867-24989)
scaffold0009 (110-230)||(7397-7518)
scaffold0009 (182-230)||(7512-7560)
[»] scaffold1130 (1 HSPs)
scaffold1130 (109-150)||(1354-1395)
[»] scaffold0744 (3 HSPs)
scaffold0744 (109-150)||(1405-1446)
scaffold0744 (166-230)||(1364-1428)
scaffold0744 (192-230)||(1457-1495)
[»] scaffold0148 (2 HSPs)
scaffold0148 (109-150)||(24571-24612)
scaffold0148 (166-230)||(24589-24653)
[»] scaffold0043 (2 HSPs)
scaffold0043 (110-150)||(47173-47213)
scaffold0043 (166-230)||(47131-47195)
[»] scaffold0019 (1 HSPs)
scaffold0019 (159-230)||(142317-142388)
[»] scaffold0006 (1 HSPs)
scaffold0006 (109-188)||(43805-43884)
[»] scaffold0559 (2 HSPs)
scaffold0559 (166-230)||(3258-3323)
scaffold0559 (110-150)||(3301-3341)
[»] scaffold0116 (2 HSPs)
scaffold0116 (109-150)||(5262-5303)
scaffold0116 (166-230)||(5221-5285)
[»] scaffold0809 (2 HSPs)
scaffold0809 (111-230)||(1908-2028)
scaffold0809 (166-230)||(1865-1929)
[»] scaffold0021 (1 HSPs)
scaffold0021 (180-230)||(23957-24007)
[»] scaffold0473 (1 HSPs)
scaffold0473 (109-150)||(1720-1761)
[»] scaffold0352 (1 HSPs)
scaffold0352 (111-150)||(9719-9758)
[»] scaffold1822 (1 HSPs)
scaffold1822 (117-149)||(860-892)


Alignment Details
Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 248 - 391
Target Start/End: Original strand, 12758909 - 12759054
Alignment:
Q  248 tgggattctcaaaaacatacttgaaaccaatattgtacaattattattagatttgttctagttacagcctataaacttcctgttacaccttaaattgaca 347  Q
    |||| |||||||||||||||| |||||||||| | ||||||||||||| ||||||||||| ||||| ||||||||||| | |||| ||||||||||||||    
T  12758909 tggggttctcaaaaacatactcgaaaccaatactctacaattattattcgatttgttctaattacaccctataaactttcggttaaaccttaaattgaca 12759008  T
Q  348 aaa--acacccttaattccttctctaattttcaattattacccttt 391  Q
    |||  |||||| |||||| || ||||||||| ||||||||||||||    
T  12759009 aaaacacacccctaattcattttctaattttaaattattacccttt 12759054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 13168965 - 13168845
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  13168965 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaa-ttctgaaaatggcctattaagggtgttttccggaaaataaattttttacg 13168867  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  13168866 agggtgcaaatcaaaccgaaaa 13168845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 47465279 - 47465401
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||  |||||||||| |||||||    
T  47465279 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgtttttcagaaaataaaatttttac 47465378  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  47465379 gagggtgcaaatcaaaccgaaaa 47465401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 45617563 - 45617683
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||  | |||||||| ||||||||| ||||||||    
T  45617563 ggaaaacagccttaataggccattcaaaaaccaaaatttcttgaaaaaa-ttctgaaaatggcctattatggatgttttctggaaaataaaatttttacg 45617661  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  45617662 agggtgcaaatcaaaccgaaaa 45617683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 54442165 - 54442045
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||| ||||||||||  ||||||||    
T  54442165 gaaaacactcttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgttttccagaaaataaaaattttacga 54442066  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     |||||||||||||| |||||    
T  54442065 gggtgcaaatcaaactgaaaa 54442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 49249520 - 49249642
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  49249520 ggaaaacgcccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgttttctgaaaaataaattttttac 49249619  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||| ||||||||||    
T  49249620 aagggtgcaaattaaaccgaaaa 49249642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 17697256 - 17697379
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||  |||||||||  |||||||||  |||||    
T  17697256 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaagattctgaaaatggcctattaggggtgttttccggaaaataaaaatttta 17697355  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  17697356 cgagggtgcaaatcaaaccgaaaa 17697379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 22324624 - 22324501
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||  ||||||||| | ||||||||||||||     
T  22324624 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaattctgaaaatggcctattaggggtgttttccaaaaaataaattttttt 22324525  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| | ||||||||||||||||||    
T  22324524 cgaggatgcaaatcaaaccgaaaa 22324501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 4758553 - 4758675
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| ||||||||| |||||||    
T  4758553 ggaaaacacccttaataagccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaatttttac 4758652  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || || |||||||||| ||||||    
T  4758653 gagggcgcaaatcaaatcgaaaa 4758675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 19495594 - 19495472
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  19495594 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 19495495  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  19495494 aagggtgcaaatcaaaccgaaaa 19495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 27487610 - 27487732
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt-ctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||| ||||||||||||||||||        || |||||||||||||||||  ||||||||   |||||||||  ||||||    
T  27487610 ggaaaacacccttaataggccatccaaaaaccaaaatttcttgaaaaatttttctgaaaatggcctattaggggtgtttttcggaaaataaaaattttac 27487709  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||||||    
T  27487710 gatggtgcaaatcaaaccgaaaa 27487732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 19042219 - 19042095
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| |||||  |||  |||    
T  19042219 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaaataataattt 19042120  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||| ||||    
T  19042119 acgagggtgcaaatcaaaccaaaaa 19042095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 6810572 - 6810694
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||| | |||||| |||||||||||||||||         |||||||||||||||||||| ||||||||   ||||||||| |||||||    
T  6810572 ggaaaacacccttaacatgccatttaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgtttttcggaaaataaaatttttac 6810671  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  6810672 gagggtgcaaatcaaaccgaaaa 6810694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 8401388 - 8401266
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||||||||| |||||||||||||||||         |||||||||||||||||||   ||||||||  |||||||||  ||||||    
T  8401388 ggaaaacacccttaataggccattaaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggagtgttttccggaaaataaaaattttac 8401289  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  8401288 gagggtgcaaatcaaaccgaaaa 8401266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 9150905 - 9150783
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttct-gaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||        || | |||||||||||||||  |||||||| | |||||||||  ||||||    
T  9150905 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaatttttttttgaaaatggcctattaggggtgttttgtggaaaataaaaattttac 9150806  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  9150805 gagggtgcaaatcaaaccgaaaa 9150783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 19203690 - 19203812
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||  | ||||||   ||||||||| |||||||    
T  19203690 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaattttttttttgaaaatggcctattagggatgtttttcggaaaataaaatttttac 19203789  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  19203790 gagggtgcaaatcaaaccgaaaa 19203812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 18638235 - 18638357
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||| ||   ||||||||  |||||||||  ||||||    
T  18638235 ggaaaacacccttaatagaccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctactatgagtgttttccggaaaataaaaattttac 18638334  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  18638335 gagggtgcaaatcaaaccgaaaa 18638357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 15323613 - 15323493
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt--tctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||| |||||||||||||||||||||||||||||||||           ||||||||||||||||||  |||||||||  |||||||||  |||||    
T  15323613 ggaaaacaaccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaaatctgaaaatggcctattaggggtgttttccggaaaataaaaatttta 15323514  T
Q  207 cgatggtgcaaatcaaaccga 227  Q
    ||| |||||||||||||||||    
T  15323513 cgagggtgcaaatcaaaccga 15323493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 49236428 - 49236529
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||| |||||||||  ||||||||| |||||||    
T  49236428 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgttttccggaaaataaaatttttac 49236527  T
Q  208 ga 209  Q
    ||    
T  49236528 ga 49236529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 21822623 - 21822687
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  21822623 aatggcctattaagggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 21822687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 22123986 - 22124042
Alignment:
Q  330 ttacaccttaaattgacaaaaacacccttaattccttctctaattttcaattattac 386  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22123986 ttaccccttaaattgacaaaaacacccttaattccttttctaattttcaattattac 22124042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 23573335 - 23573223
Alignment:
Q  119 cttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaa 217  Q
    ||||||||||||||||||||||||||||||||         ||||||||||||||||| |  ||||||||||  |||||||| ||||||| | |||||||    
T  23573335 cttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctataaggggtgttttctgaaaaataaaatttttacaaaggtgcaa 23573236  T
Q  218 atcaaaccgaaaa 230  Q
    |||||||||||||    
T  23573235 atcaaaccgaaaa 23573223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 11347400 - 11347283
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         || |||||||| |||||||  |||||||||   ||||||||  ||||||    
T  11347400 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattatgaaaatgacctattaggggtgttttccgaaaaataaaaattttac 11347301  T
Q  208 gatggtgcaaatcaaacc 225  Q
    || |||||||||||||||    
T  11347300 gagggtgcaaatcaaacc 11347283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 36498379 - 36498274
Alignment:
Q  120 ttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaa 218  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| ||||||||| |||| |||    
T  36498379 ttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttacgagggtgtaaa 36498280  T
Q  219 tcaaac 224  Q
    ||||||    
T  36498279 tcaaac 36498274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 13168942 - 13169006
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||| |||||||||||||||    
T  13168942 aatggcctattaagggtgttttccggaaaataaattttttacgagggtgtaaatcaaaccgaaaa 13169006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 17697279 - 17697215
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  17697279 aatggcctattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 17697215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 19042194 - 19042258
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||| ||||    
T  19042194 aatggcctattaagggtgttttccagaaaataaaatttttacgagggtgcaaatcaaaccaaaaa 19042258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 47465302 - 47465238
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  47465302 aatggcctattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 47465238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 49633096 - 49633160
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||||| | ||||||||  |||||||| ||||||||||||||||||||    
T  49633096 aatggcctattaaaggtgttttccaaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 49633160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 13578846 - 13578767
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttct 189  Q
    |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||||    
T  13578846 gaaaacacacttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgttttct 13578767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 19675722 - 19675833
Alignment:
Q  120 ttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaa 218  Q
    ||||||||||| |||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||| |||| |||||| | ||||||||    
T  19675722 ttaataggccactcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaaaaaatattttacaagggtgcaaa 19675821  T
Q  219 tcaaaccgaaaa 230  Q
    ||||||||||||    
T  19675822 tcaaaccgaaaa 19675833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 10264500 - 10264590
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaa 199  Q
    |||||| |||||||||||||||||||||||||||||||||||        |||||||||||||||||||  ||| |||||  |||||||||    
T  10264500 ggaaaagacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtcttttccggaaaataaa 10264590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 20570001 - 20570125
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt---nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    |||||||||||||||||||||||||||||||||||||||| |            || |||||||||||||||  |||||||||  |||||||||  ||||    
T  20570001 ggaaaacacccttaataggccattcaaaaaccaaaatttcatgaaaaaaaaaaatcagaaaatggcctattaggggtgttttccggaaaataaaaatttt 20570100  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    || | ||||||||||||||||||||    
T  20570101 acaagggtgcaaatcaaaccgaaaa 20570125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 43071197 - 43071075
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||| | ||||||||||||||||||||||         |||||||||||||||||||  | ||||||   ||||||||| |||||||    
T  43071197 ggaaaacacccttaatatgtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagggatgttttacggaaaataaaatttttac 43071098  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || || ||||| |||||||||||    
T  43071097 gagggcgcaaaacaaaccgaaaa 43071075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 8401365 - 8401429
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  8401365 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 8401429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 19291528 - 19291488
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19291528 gaaaacacccttaataggccattcaaaaaccaaaatttctt 19291488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 28755245 - 28755309
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  28755245 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 28755309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 49236451 - 49236387
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  49236451 aatgacctattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 49236387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 54442143 - 54442207
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||  ||||||||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  54442143 aatggcctattaagagtgttttctggaaaataaaatttttacgagggtgccaatcaaaccgaaaa 54442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 12294464 - 12294587
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgtttt-ctagaaaataaatttttta 206  Q
    |||||||| |||||||||||||||||||||||||||||||||         ||||||||||||| |||||  |||||||| | | ||||  |||  ||||    
T  12294464 ggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcttattaggggtgttttccgaaaaaaataataattta 12294563  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  12294564 cgagggtgcaaatcaaaccgaaaa 12294587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 28755268 - 28755146
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||         ||||||||||||||||||| | |||||||   |||||||||  ||||||    
T  28755268 ggaaaacacccttaataggccattcaaaaactaaatttttttggaaaaaaattctgaaaatggcctattagatgtgttttacggaaaataaaaattttac 28755169  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||| |||||||||| |||||    
T  28755168 gagggtccaaatcaaacagaaaa 28755146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 49633120 - 49633078
Alignment:
Q  108 tggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  49633120 tggaaaacacctttaataggccattcaaaaaccaaaatttctt 49633078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 6458105 - 6458068
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6458105 gaaaacacccttaataggccattcaaaaaccaaaattt 6458068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 9663387 - 9663346
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  9663387 ggaaaacatccttaataggccattcaaaaaccaaaatttctt 9663346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 21822646 - 21822605
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  21822646 ggaaaacacccttaataggccattcaaaaatcaaaatttctt 21822605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 40269737 - 40269696
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  40269737 ggaaaacacctttaataggccattcaaaaaccaaaatttctt 40269696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 32559 - 32619
Alignment:
Q  170 gcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||| ||||||||   |||||||||||||||| || ||||||||||||||||||||    
T  32559 gcctattaagggtgtttttcggaaaataaattttttatgagggtgcaaatcaaaccgaaaa 32619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6378497 - 6378433
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||  ||| ||||||||| ||||||||||  |||||||| ||||||||||||||||||||    
T  6378497 aatggcctcgtaagggtgttttccagaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 6378433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 6458083 - 6458147
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  6458083 aatggcctattaagggtgttttcaggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 6458147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 9663364 - 9663428
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  9663364 aatggcctattaaggatgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 9663428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 19203713 - 19203649
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  19203713 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 19203649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 19495571 - 19495635
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  19495571 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 19495635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 26717268 - 26717148
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||| ||||||||||||||||||||||         |||||||||| |||||||||  |||||||   |||||||||  |||||| |    
T  26717268 aaaacacccttaataggacattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatagcctattaagagtgtttttcggaaaataaaaattttacaa 26717169  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
      |||||||||| ||||||||    
T  26717168 gagtgcaaatcagaccgaaaa 26717148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 36498387 - 36498435
Alignment:
Q  182 tgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  36498387 tgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 36498435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 39489260 - 39489300
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  39489260 gaaagcacccttaataggccattcaaaaaccaaaatttctt 39489300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 40269714 - 40269778
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||||||  |||||||||  ||||| || || |||||||||||||||||    
T  40269714 aatggcctattaaaggtgttttccggaaaataaaaattttaagagggcgcaaatcaaaccgaaaa 40269778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 49633050 - 49632982
Alignment:
Q  162 tgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||| |||||  |||||||||  |||||||| |||||||||| || |||||||||||||||||    
T  49633050 tgaaaatggcttattaggggtgttttccggaaaataatttttttacgagggagcaaatcaaaccgaaaa 49632982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 32576 - 32537
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  32576 aaaacacccttaataggctattcaaaaaccaaaatttctt 32537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 6378472 - 6378515
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  6378472 ctggaaaacacccttacgaggccattcaaaaaccaaaatttctt 6378515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 15658903 - 15658942
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  15658903 aaaacacccttaataggccattaaaaaaccaaaatttctt 15658942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 23962807 - 23962846
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  23962807 aaaacacccttaataggtcattcaaaaaccaaaatttctt 23962846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 6458048 - 6457994
Alignment:
Q  162 tgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgca 216  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||| ||||||    
T  6458048 tgaaaatggcctactagaggtgttttctggaaaataaatttttaacgagggtgca 6457994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 39537494 - 39537532
Alignment:
Q  192 aaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  39537494 aaaataaaatttttacgatggtgcaaatcaaaccgaaaa 39537532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 47283483 - 47283521
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  47283483 ggaaaacgcccttaataggccattcaaaaaccaaaattt 47283521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 18909662 - 18909782
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaa-atttcttnnnnnnnnttctgaaaa-tggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||| |||||||||||||||||||||||||| |||| |         ||||||||| ||||||||||  ||||||||  ||||||||||  |||||||    
T  18909662 aaaacatccttaataggccattcaaaaaccaaagatttttgaaaaaaaattctgaaaaatggcctattagcggtgtttttcagaaaataaaaattttacg 18909761  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | |||||||||||||| |||||    
T  18909762 a-ggtgcaaatcaaactgaaaa 18909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 4758576 - 4758512
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||| |||||| |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  4758576 aatggcttattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 4758512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 11347377 - 11347441
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   |||||||| |||||| |  ||||||||||||||||||||    
T  11347377 aatggcctattaagggtgttttccgaaaaataaaatttttatgtgggtgcaaatcaaaccgaaaa 11347441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 15323590 - 15323654
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||  ||||||||| ||||||||| ||| |||||||||| |||||    
T  15323590 aatggcctattaaggttgttttccggaaaataaaatttttacgagggtacaaatcaaactgaaaa 15323654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18909683 - 18909619
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | ||||||    ||||||||  |||||||||||||||||||||||||||||    
T  18909683 aatggcctattaaggatgtttttcgaaaaataaaaattttacgatggtgcaaatcaaaccgaaaa 18909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 38095140 - 38095216
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttc 188  Q
    |||||||| |||||||| ||||||||||||||||||||||        |||| |||||| ||||||||||||||||||    
T  38095140 aaaacacctttaataggtcattcaaaaaccaaaatttctt-gaaaaaattctaaaaatgacctattaaaggtgttttc 38095216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 49249543 - 49249479
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| || ||||||   ||||||||  ||||||||||||| |||||||||||||||    
T  49249543 aatggcctattaagggcgttttccgaaaaataaaaattttacgatggtgtaaatcaaaccgaaaa 49249479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 27487632 - 27487569
Alignment:
Q  167 atggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||| |||||||||  |||||||||  ||||| || |||| |||||||||||||||    
T  27487632 atggcctattaagggtgttttccggaaaataaaaattttatgagggtgaaaatcaaaccgaaaa 27487569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 12294487 - 12294424
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||   |||||||| ||||||||| ||||||||||||||| ||||    
T  12294487 aatggcctattaaggatgttttccgaaaaataaaatttttacga-ggtgcaaatcaaaccaaaaa 12294424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 20570024 - 20569960
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| |||| ||||||||| |||||    
T  20570024 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgaaaatcaaactgaaaa 20569960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 18609372 - 18609493
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  |||||||||  ||||||||||||||||||    
T  18609372 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaattttttacg 18609471  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  18609472 agggtgcaaatcaaaccgaaaa 18609493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 43681398 - 43681276
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||  |||||||||| ||||||||| |||||||    
T  43681398 ggaaaacacccttaatagcccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaatttttac 43681299  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  43681298 gagggtgcaaatcaaaccgaaaa 43681276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 16669438 - 16669317
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  |||||||||  |||||||||  |||||||    
T  16669438 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttacg 16669339  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||| ||||    
T  16669338 agggtgcaaatcaaaccaaaaa 16669317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 10761030 - 10761152
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| |||||||    
T  10761030 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttac 10761129  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  10761130 aagggtgcaaatcaaaccgaaaa 10761152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 22980911 - 22981033
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||| || |||||||| |||||||||  ||||||    
T  22980911 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagagatgttttctggaaaataaaaattttac 22981010  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||| ||||||||||||||||    
T  22981011 gagggtacaaatcaaaccgaaaa 22981033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 5385631 - 5385753
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||  ||||||||   |||||||||  ||||||    
T  5385631 ggaaaacacccttaataggccatccaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaataaaaattttac 5385730  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||||||    
T  5385731 gatggtgcaaatcaaaccgaaaa 5385753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 23352183 - 23352061
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||| |  |||||||||    
T  23352183 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaattttattttttac 23352084  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  23352083 gagggtgcaaatcaaaccgaaaa 23352061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 28004744 - 28004865
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt--ctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||| ||||||||||||||||||||||||||||||||        ||  ||||||||||||||||| ||||||||||| |||||||||  |||||||    
T  28004744 aaaacactcttaataggccattcaaaaaccaaaatttcttgaaaaaatttttctgaaaatggcctattagaggtgttttctggaaaataaaaattttacg 28004843  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | | ||||||||||||||||||    
T  28004844 aggatgcaaatcaaaccgaaaa 28004865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 28062046 - 28062167
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt--ctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||| ||||||||||||||||||||||||||||||||        ||  ||||||||||||||||| ||||||||||| |||||||||  |||||||    
T  28062046 aaaacactcttaataggccattcaaaaaccaaaatttcttgaaaaaatttttctgaaaatggcctattagaggtgttttctggaaaataaaaattttacg 28062145  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | | ||||||||||||||||||    
T  28062146 aggatgcaaatcaaaccgaaaa 28062167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 21589943 - 21590063
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| |||||||||    
T  21589943 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttacga 21590042  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     |||||  |||||||||||||    
T  21590043 cggtgcctatcaaaccgaaaa 21590063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 23382857 - 23382733
Alignment:
Q  108 tggaaaacacccttaataggccattcaaaaaccaaaa-tttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||         |||| ||||||||||||||| |||||||||  ||||||||| |||||    
T  23382857 tggaaaacacccttaataggccattcaaaaaccaaaaatttcttgaaaaaaaattcttaaaatggcctattaagggtgttttccggaaaataaaattttt 23382758  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| | ||||||||||||||||||    
T  23382757 acgaggatgcaaatcaaaccgaaaa 23382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 17159291 - 17159172
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||        |||| ||||||||||||||  | ||||||   ||||||||| |||||||||     
T  17159291 aaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaattctaaaaatggcctattagggttgtttttcggaaaataaaatttttacgag 17159192  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||    
T  17159191 ggtgcaaatcaaaccgaaaa 17159172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 42933230 - 42933108
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| ||||||||||||||||||||| |||||||||||         |||||||||||||||||||  |||||||||| ||||||||| ||||||     
T  42933230 ggaaaacatccttaataggccattcaaaaatcaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaatttttaa 42933131  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||| ||||    
T  42933130 gaaggtgcaaatcaaaccaaaaa 42933108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 116719 - 116842
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt--ctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||||||||| ||||||| ||        ||  |||||||||||||||||  |||||||||| |||||||||  |||||    
T  116719 ggaaaacacccttaataggccattcaaaaactaaaattttttgaaattttttttctgaaaatggcctattaggggtgttttctggaaaataaaaatttta 116818  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||| ||||    
T  116819 cgagggtgcaaatcaaaccaaaaa 116842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 6163024 - 6163147
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataa-atttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| ||||| || || |||||    
T  6163024 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaatttttttctgaaaatggcctattatgggtgttttctggaaaaaaatatatttta 6163123  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    | | | ||||||||||||||||||    
T  6163124 caaggatgcaaatcaaaccgaaaa 6163147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 11296677 - 11296560
Alignment:
Q  114 acacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatgg 212  Q
    |||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||| | |||||||||  |||||||| ||    
T  11296677 acacccataataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttttggaaaataaaaattttacgaagg 11296578  T
Q  213 tgcaaatcaaaccgaaaa 230  Q
    |||||||||||| |||||    
T  11296577 tgcaaatcaaacagaaaa 11296560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 222741 - 222677
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  222741 aatggcctattaagggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 222677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 691896 - 691832
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  691896 aatggcctattaagggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 691832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 736364 - 736300
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  736364 aatggcctattaagggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 736300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 860259 - 860195
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  860259 aatggcctattaagggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 860195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 2672091 - 2672200
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||| ||||||||||||||||||||            |||||||||||||||  |||||||||  |||||||||  |||||||    
T  2672091 ggaaaacacccttaataggcctttcaaaaaccaaaatttctt------------gaaaatggcctattaggggtgttttccggaaaataaaaattttacg 2672178  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  2672179 agggtgcaaatcaaaccgaaaa 2672200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 34618071 - 34618193
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||| |||||||||   ||||||||  ||||||    
T  34618071 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaattttttttctaaaaatggcctattaagggtgttttccgaaaaataaaaattttac 34618170  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |   ||||||||||||||||    
T  34618171 gaggacacaaatcaaaccgaaaa 34618193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 7595333 - 7595454
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||| |||||||||||||||||||||||||||||||         | |||||||||||||||||  |||||||||   |||||||| |||||| |    
T  7595333 gaaaacaccattaataggccattcaaaaaccaaaatttcttgaaaaaaaatcctgaaaatggcctattaggggtgttttccgaaaaataaaatttttatg 7595432  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | |||||||||||||| |||||    
T  7595433 agggtgcaaatcaaactgaaaa 7595454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 7910229 - 7910350
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||| |||||||| |||||||||||||||||||||||||||        |||| ||||||||||||||   ||||||| | |||||  |||  ||||||    
T  7910229 ggaaagcacccttattaggccattcaaaaaccaaaatttcttaaaaaaaattctaaaaatggcctattaggagtgttttttggaaaaataataatttacg 7910328  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  7910329 agggtgcaaatcaaaccgaaaa 7910350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 7595355 - 7595291
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  ||||||||||||||||||||||| |||||    
T  7595355 aatggcctattaatggtgttttctggaaaataaaaattttacgatggtgcaaatcaaactgaaaa 7595291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 40774009 - 40774073
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||||||||||||||  |||||||| |||||||||||||| |||||    
T  40774009 aatggcctattaagggtgttttctagaaaataaaaattttacgagggtgcaaatcaaactgaaaa 40774073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 36574585 - 36574486
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    |||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||  |||||||||  |||||||||  ||||||||    
T  36574585 gaaatcacccttaataggccattcaaaaaccaaaatttctttaaaaaaaatctgaaaatggcctattatgggtgttttccggaaaataaaaattttacga 36574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 16669415 - 16669479
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||||||||||    
T  16669415 aatggcctattaagggtgttttccggaaaataaaatttttacgagggtgaaaatcaaaccgaaaa 16669479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 17749986 - 17749922
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   ||||||||| ||||||||| ||||||||||||||||||||    
T  17749986 aatggcctattaagggtgtttttcggaaaataaaatttttacgaaggtgcaaatcaaaccgaaaa 17749922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 23352160 - 23352224
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  23352160 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 23352224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 23382833 - 23382897
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| | |||||||| ||||||||| |||| |||||||||||||||    
T  23382833 aatggcctattaagggtgttttccaaaaaataaaatttttacgagggtgaaaatcaaaccgaaaa 23382897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 36574563 - 36574627
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||| ||||| ||||||||| ||||||||| |||| |||||||||||||||    
T  36574563 aatggcctattaagggtgatttctggaaaataaaatttttacgagggtgaaaatcaaaccgaaaa 36574627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 37597823 - 37597763
Alignment:
Q  170 gcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||    
T  37597823 gcctattaaaggtgtttttcgaaaaataaattttttacgagggtgcaaatcaaaccgaaaa 37597763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 28898920 - 28898881
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28898920 aaaacacccttaataggccattcaaaaaccaaaatttctt 28898881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 31957405 - 31957444
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31957405 aaaacacccttaataggccattcaaaaaccaaaatttctt 31957444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 116742 - 116678
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||||| ||||||||||||||||||    
T  116742 aatggcctattaagggtgttttccgaaaaataaaaattttacgatgatgcaaatcaaaccgaaaa 116678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 9500939 - 9500903
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    |||||||||||||||||||||||||||||||||||||    
T  9500939 aaaacacccttaataggccattcaaaaaccaaaattt 9500903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18609395 - 18609331
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||   ||||||| ||||||||||||||||||||    
T  18609395 aatggcctattaagggtgttttccggaaaataaaaaatttacgagggtgcaaatcaaaccgaaaa 18609331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 21127510 - 21127470
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  21127510 gaaaacacccttaataggccattcaaaaaccaaagtttctt 21127470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 21127488 - 21127552
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||| |||| ||||||||| |||||    
T  21127488 aatggcctattaagggtgttttctgaaaaataatttttttacgagggtgtaaatcaaactgaaaa 21127552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 40774031 - 40773991
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  40774031 gaaaacacccttaataggccattcaaaagccaaaatttctt 40773991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 222718 - 222753
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaa 144  Q
    ||||||||||||||||||||||||||||||||||||    
T  222718 ggaaaacacccttaataggccattcaaaaaccaaaa 222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 691873 - 691908
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaa 144  Q
    ||||||||||||||||||||||||||||||||||||    
T  691873 ggaaaacacccttaataggccattcaaaaaccaaaa 691908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 736341 - 736376
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaa 144  Q
    ||||||||||||||||||||||||||||||||||||    
T  736341 ggaaaacacccttaataggccattcaaaaaccaaaa 736376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 860236 - 860271
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaa 144  Q
    ||||||||||||||||||||||||||||||||||||    
T  860236 ggaaaacacccttaataggccattcaaaaaccaaaa 860271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 5385653 - 5385590
Alignment:
Q  167 atggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  5385653 atggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 5385590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 15114007 - 15113936
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||| ||||||||    ||||||||  |||||| | ||||||||||||||||||||    
T  15114007 ttctgaaaatggcctattaagggtgtttttcgaaaaataaaaattttacaagggtgcaaatcaaaccgaaaa 15113936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 17749965 - 17750004
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  17749965 aaaacacccttaataggccattcaaaaaccaaagtttctt 17750004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 18845146 - 18845185
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  18845146 aaaacacctttaataggccattcaaaaaccaaaatttctt 18845185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 12610859 - 12610821
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttct 149  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  12610859 aaaacacccctaataggccattcaaaaaccaaaatttct 12610821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 2672111 - 2672050
Alignment:
Q  169 ggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||| |||||||||  ||||||||| ||||||| | |||||||| |||||||||||    
T  2672111 ggcctattaagggtgttttccggaaaataaaatttttacaagggtgcaaaacaaaccgaaaa 2672050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 31951370 - 31951254
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt--nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||| |||||||||||| |||||||||||           ||||||||||||||||||  ||||||||   ||||| ||||  |||||    
T  31951370 gaaaacacccttaataagccattcaaaaatcaaaatttcttgaaaaaaaaaatctgaaaatggcctattaggggtgtttttcggaaaaaaaataatttac 31951271  T
Q  208 gatggtgcaaatcaaac 224  Q
    || ||||||||||||||    
T  31951270 gagggtgcaaatcaaac 31951254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 9500918 - 9500982
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  |||||||||| ||||||||||||| ||||    
T  9500918 aatggcctattaagggtgtttttcggaaaataaaaattttacgatgatgcaaatcaaaccaaaaa 9500982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 17159270 - 17159334
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| ||||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  17159270 aatgacctattaagggtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 17159334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18845167 - 18845103
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||||    ||||||||  |||||||| |||| |||||||||||||||    
T  18845167 aatggcctattaaaggtgtttttcgaaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 18845103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 28004765 - 28004701
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||  |||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  28004765 aatggcctattaagagtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 28004701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 28062067 - 28062003
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||  |||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  28062067 aatggcctattaagagtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 28062003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 42933207 - 42933271
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||  ||||||||   |||||||| ||||||||||||||||||||    
T  42933207 aatggcctattaaggatgttttcctgaaaataataattttacgagggtgcaaatcaaaccgaaaa 42933271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 43681375 - 43681435
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccg 226  Q
    ||||| ||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||    
T  43681375 aatgggctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccg 43681435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 23943166 - 23943205
Alignment:
Q  191 gaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  23943166 gaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 23943205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 28898899 - 28898961
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaa 228  Q
    ||||||||||||| ||||||||   |||||||||  |||||||| | ||||||||||||||||    
T  28898899 aatggcctattaagggtgtttttcggaaaataaaaattttacgaggatgcaaatcaaaccgaa 28898961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6163047 - 6162983
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  ||||| ||  | |||||||||||||||||    
T  6163047 aatggcctattaagggtgttttccggaaaataaaaattttatgagagcgcaaatcaaaccgaaaa 6162983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 10761053 - 10760990
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||| ||||   |||||| ||||||||||||||||||||    
T  10761053 aatggcctattaagggtgttttccggaaaa-aaataaattacgagggtgcaaatcaaaccgaaaa 10760990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21589964 - 21589900
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||    |||||||| ||||||||| |||| || ||||||||||||    
T  21589964 aatggcctattaagggtgtttttcgaaaaataaaatttttacgagggtgaaattcaaaccgaaaa 21589900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 31951348 - 31951388
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  31951348 aatggcttattaagggtgttttctagaaaataaaattttta 31951388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 31957426 - 31957363
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  |||| ||| ||||||||||||||||||||    
T  31957426 aatggcctattaagggtgtttttcggaaaataaaaatttt-cgagggtgcaaatcaaaccgaaaa 31957363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 39517907 - 39517935
Alignment:
Q  121 taataggccattcaaaaaccaaaatttct 149  Q
    |||||||||||||||||||||||||||||    
T  39517907 taataggccattcaaaaaccaaaatttct 39517935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 5246374 - 5246495
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||| ||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  5246374 ggaagacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaagggtgttttctagaaaataaaaattttacg 5246473  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  5246474 agggtgcaaatcaaaccgaaaa 5246495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 6953980 - 6954104
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||    
T  6953980 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaatttt 6954079  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||||    
T  6954080 acgagggtgcaaatcaaaccgaaaa 6954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 11586331 - 11586453
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |  |||||||||| |||||||||  ||||||    
T  11586331 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctataaggggtgttttctggaaaataaaaattttac 11586430  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||| |||||||||||    
T  11586431 gatggtgcaaaccaaaccgaaaa 11586453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 39935033 - 39935155
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||  |||||||||  ||||||||| |||||||    
T  39935033 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattatgaaaatggcctattaggggtgttttccggaaaataaaatttttac 39935132  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  39935133 gagggtgcaaatcaaaccgaaaa 39935155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 9403424 - 9403545
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||| |||||||||||||||||||||||||||||||||||        |||| ||||||||||||||  |||||||||| |||||||||  |||||||    
T  9403424 ggaaaatacccttaataggccattcaaaaaccaaaatttcttaaaaaaaattctaaaaatggcctattaggggtgttttctggaaaataaaaattttacg 9403523  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||| ||||||||||||||||    
T  9403524 agggtacaaatcaaaccgaaaa 9403545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 9631758 - 9631879
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| ||||||||    
T  9631758 gaaaacacccctaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttacg 9631857  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  9631858 agggtgcaaatcaaaccgaaaa 9631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 26712192 - 26712071
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||||  |||||||||  |||||||| ||||||||     
T  26712192 ggaaaacacccttaattggccattcaaaaaccaaaatttcttgaaaaaaaatctgaaaatggcctattaggggtgttttccggaaaataatttttttaca 26712093  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  26712092 agggtgcaaatcaaaccgaaaa 26712071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 16985294 - 16985414
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaa-tggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||        || |||||| |||||||||| ||||||||||  |||||||||  ||||||||    
T  16985294 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaattttttttgaaaaatggcctattagaggtgttttccggaaaataaaaattttacga 16985393  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  16985394 gggtgcaaatcaaaccgaaaa 16985414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 22374747 - 22374623
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| |||||||||  ||||    
T  22374747 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaatttt 22374648  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||| ||||||||| |||||    
T  22374647 acgagggtgtaaatcaaactgaaaa 22374623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 48044868 - 48044745
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||  |||||||||  ||||||||| ||||||    
T  48044868 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaattttta 48044769  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
     || ||||||||||||||||||||    
T  48044768 tgagggtgcaaatcaaaccgaaaa 48044745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 40633271 - 40633149
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||| |||||||||  |||||||||  ||||||    
T  40633271 ggaaaacacccttaataggccattcaaaaaccaaaatttcttaaaatttttttttgaaaatggcctattaagggtgttttccggaaaataaaaattttac 40633172  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||| ||||||||    
T  40633171 gagggtgcaaatcacaccgaaaa 40633149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 112 - 230
Target Start/End: Original strand, 1819188 - 1819307
Alignment:
Q  112 aaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt-tctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||  |||||||||  ||||||||| ||||||||||    
T  1819188 aaacacccttaataggccattcaaaaaccaaaatttctaggaaaaaaaatctgaaaatggcctattaggggtgttttccggaaaataaaatttttacgat 1819287  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||    
T  1819288 ggtacaaatcaaaccgaaaa 1819307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 13430351 - 13430473
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||  ||||||||   |||||| |||  ||||    
T  13430351 ctggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaat-aataattta 13430449  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  13430450 cgagggtgcaaatcaaaccgaaaa 13430473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 1340865 - 1340743
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||| |||| |||||||||||||||||||||||| ||||||         |||||||||||||||||||  |||||||||| ||||||||| |||||||    
T  1340865 ggaaagcacctttaataggccattcaaaaaccaaagtttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaatttttac 1340766  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||| ||||||||||    
T  1340765 gagggtgcaaattaaaccgaaaa 1340743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 12886935 - 12886825
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    |||||||||||||||||||||||||||||||||| ||| ||           ||||||||||||||||  |||||||||| ||||||||| |||||||||    
T  12886935 gaaaacacccttaataggccattcaaaaaccaaatttttttt----------tgaaaatggcctattagtggtgttttctggaaaataaaatttttacga 12886846  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  12886845 gggtgcaaatcaaaccgaaaa 12886825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 25395601 - 25395479
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt-ctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||        || |||||||||||||||||  ||||||||| ||| ||||||   |||||    
T  25395601 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaatttctgaaaatggcctattatgggtgttttccagagaataaaaaatttac 25395502  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  25395501 gagggtgcaaatcaaaccgaaaa 25395479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 29525805 - 29525683
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| ||||||||||||||||||||||||||||| |||         ||||||||||||||||||| ||||||||||  |||||||||  |||||     
T  29525805 ggaaaacatccttaataggccattcaaaaaccaaaattccttgaaaaaaaattctgaaaatggcctattagaggtgttttccggaaaataaaaattttat 29525706  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  29525705 gagggtgcaaatcaaaccgaaaa 29525683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 45323371 - 45323250
Alignment:
Q  108 tggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| |||||||||||||||||||||||        || ||||||||||||||||  ||||||||||  ||||||||  ||||||    
T  45323371 tggaaaacacccttaatagaccattcaaaaaccaaaatttctttaaaaaaattatgaaaatggcctattaggggtgttttctgaaaaataaa-attttac 45323273  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  45323272 aagggtgcaaatcaaaccgaaaa 45323250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 51166785 - 51166898
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||||||||||| |    
T  51166785 aaaacacccttaataggtcattcaaaaaccaaaatttcttgaaataaaattctgaaaatggcctattaggggtgttttccggaaaataaattttttacaa 51166884  T
Q  210 tggtgcaaatcaaa 223  Q
     |||||||||||||    
T  51166885 aggtgcaaatcaaa 51166898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 12163267 - 12163387
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||| ||||||||||||| |||||||||||||||||||        |||||||||||||||||||  |||||||||  |||||||||  |||||||    
T  12163267 ggaaaacaaccttaataggccaatcaaaaaccaaaatttcttgaaaaaa-ttctgaaaatggcctattaggggtgttttccggaaaataaaaattttacg 12163365  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||| ||||||||||||    
T  12163366 agggtgcaattcaaaccgaaaa 12163387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 22374722 - 22374786
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  22374722 aatggcctattaagggtgttttccagaaaataaattttttacgagggtgcaaatcaaaccgaaaa 22374786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 1613693 - 1613817
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt---nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||           || ||||||||||||||||| |||||||||  |||||||||  ||||    
T  1613693 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaatttttttttatgaaaatggcctattaagggtgttttccggaaaataaaaatttt 1613792  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||| ||||| ||||    
T  1613793 acgaaggtgcaaattaaaccaaaaa 1613817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 15541612 - 15541490
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||         |||| ||||||||||||||   ||||||||  |||||||||  ||||||    
T  15541612 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctaaaaatggcctattaggtgtgttttccggaaaataaaaattttac 15541513  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  15541512 gagggtgcaaatcaaaccgaaaa 15541490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 24169288 - 24169168
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||  |||||||||  |||| |  | |||||||||    
T  24169288 aaaacacccttaataggccattcaaaaaccagaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaattttaatttttacga 24169189  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  24169188 gggtgcaaatcaaaccgaaaa 24169168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 15734679 - 15734785
Alignment:
Q  125 aggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaa 223  Q
    ||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  |||||||| |||||||||||||    
T  15734679 aggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttacgagggtgcaaatcaaa 15734778  T
Q  224 ccgaaaa 230  Q
    |||||||    
T  15734779 ccgaaaa 15734785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 38601353 - 38601231
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||  |||||||||   ||||||||  ||||||    
T  38601353 ggaaaacacccttaatagggcattcaaaaaccaaaatttcttgaaaaaaaaatctgaaaatggcctattaggggtgttttccgaaaaataaaaattttac 38601254  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || | ||||||||||||||||||    
T  38601253 gaggctgcaaatcaaaccgaaaa 38601231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 15734576 - 15734677
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  15734576 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 15734675  T
Q  208 ga 209  Q
    ||    
T  15734676 ga 15734677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 12886913 - 12886977
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  12886913 aatggcctattaagggtgttttctggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 12886977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 15734599 - 15734535
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  15734599 aatggcctattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 15734535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 37216393 - 37216464
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||   ||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  37216393 ttctgaaaatggcctattaggagtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 37216464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 35552137 - 35552203
Alignment:
Q  164 aaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||| ||||||||| | |||||||| |||| |||| ||||||||||||||||||||    
T  35552137 aaaatggcctattaagggtgttttccaaaaaataaaattttcacgagggtgcaaatcaaaccgaaaa 35552203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 6587662 - 6587621
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6587662 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 6587621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 32116275 - 32116394
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||  ||||||||||||||||        |||| ||||||||||||||| |||||||||  ||||| | || |||||||    
T  32116275 ggaaaacacccttaataggccatt-taaaaccaaaatttcttgaaaaaaattcttaaaatggcctattaagggtgttttc-cgaaaaaatatattttacg 32116372  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | | | ||||||||||||||||    
T  32116373 aggatacaaatcaaaccgaaaa 32116394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 1340842 - 1340906
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||| ||||  |||||||||  |||||||| ||||||||||||||||||||    
T  1340842 aatggcctattaaaggtgctttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 1340906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 6587639 - 6587703
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| |||||||||  |||||||||||||||||||    
T  6587639 aatggcctattaagggtgttttccggaaaataaaatttttacgagtgtgcaaatcaaaccgaaaa 6587703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 13430376 - 13430312
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||| |||||||||||||| |||||    
T  13430376 aatggcctattaagggtgttttccagaaaataaaaattttacgagggtgcaaatcaaactgaaaa 13430312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 29641752 - 29641816
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||| | ||||||||| |||||| || ||||||||||||||||||||    
T  29641752 aatggcctattaagggtgttttttggaaaataaaatttttatgaaggtgcaaatcaaaccgaaaa 29641816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 39935056 - 39934992
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  39935056 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 39934992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 16087329 - 16087290
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16087329 aaaacacccttaataggccattcaaaaaccaaaatttctt 16087290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 27270469 - 27270398
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||| |||||||  |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  27270469 ttctgaaaatgacctattaggggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 27270398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 29641773 - 29641734
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29641773 aaaacacccttaataggccattcaaaaaccaaaatttctt 29641734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 44345106 - 44345145
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44345106 aaaacacccttaataggccattcaaaaaccaaaatttctt 44345145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 44545737 - 44545776
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44545737 aaaacacccttaataggccattcaaaaaccaaaatttctt 44545776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 17889630 - 17889671
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  17889630 ggaaaacacccttaatagtccattcaaaaaccaaaatttctt 17889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 5246397 - 5246333
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | ||| |||  ||||||||| ||||||||| ||||||||||||||||||||    
T  5246397 aatggcctattaaggatgtcttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 5246333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6954005 - 6953941
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||   ||||||||||||||||||    
T  6954005 aatggcctattaagggtgttttccagaaaataaaaattttacgagtatgcaaatcaaaccgaaaa 6953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 9403447 - 9403383
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||| |||||  | ||||||| ||||||||| ||||||||||||||||||||    
T  9403447 aatggcctattaagggtattttccgggaaataaaatttttacgagggtgcaaatcaaaccgaaaa 9403383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 11586354 - 11586290
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||| | ||||||||||||||||||||    
T  11586354 aatggcctattaagggtgttttccggaaaataaaaattttacaagggtgcaaatcaaaccgaaaa 11586290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 16985315 - 16985251
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  16985315 aatggcctattaagggtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 16985251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 24169267 - 24169331
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  24169267 aatggcctattaagggtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 24169331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 25395578 - 25395642
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  |||||||||| |||||||| ||||||||||||||| ||||    
T  25395578 aatgacctattaagggtgttttccggaaaataaatattttacgagggtgcaaatcaaaccaaaaa 25395642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 29525782 - 29525846
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||  ||||||||| ||||||||| ||||||||||| ||||||||    
T  29525782 aatggcctattaaggatgttttccggaaaataaaatttttacgagggtgcaaatcataccgaaaa 29525846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 40633248 - 40633312
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  40633248 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 40633312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 46173185 - 46173113
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctag-aaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||| |||||| || |||||| | | |||||||| ||||||||| ||||||||||||||||||||    
T  46173185 ttctgaaaatggtctattatagatgtttttttggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 46173113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 23284860 - 23284821
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  23284860 aaaacatccttaataggccattcaaaaaccaaaatttctt 23284821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 12163288 - 12163226
Alignment:
Q  168 tggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||| | |||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  12163288 tggcctattaaggttgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 12163226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 52881396 - 52881358
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  52881396 ggaaaacacccttaataggtcattcaaaaaccaaaattt 52881358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 35552094 - 35552049
Alignment:
Q  180 ggtgttttctagaaaataaattttttacgatggtgcaaatcaaacc 225  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||    
T  35552094 ggtgttttccggaaaataaattttttacgagggtgcaaatcaaacc 35552049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 1613716 - 1613652
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  ||||||||  |||||||||||||||||||    
T  1613716 aatggcctattaagggtgttttccgaaaaataaaaattttacgagtgtgcaaatcaaaccgaaaa 1613652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 9631780 - 9631716
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||  |||||||||  |||||||||  ||||||||  |||||||||||||||||||    
T  9631780 aatggcctattaggggtgttttcaggaaaataaaaattttacgagagtgcaaatcaaaccgaaaa 9631716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 26712169 - 26712233
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||| ||||| |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  26712169 aatggccaattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 26712233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 27322639 - 27322671
Alignment:
Q  117 cccttaataggccattcaaaaaccaaaatttct 149  Q
    |||||||||||||||||||||||||||||||||    
T  27322639 cccttaataggccattcaaaaaccaaaatttct 27322671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 44545758 - 44545694
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   ||||||||| ||||||||| || ||||||||||| |||||    
T  44545758 aatggcctattaagggtgttttgcggaaaataaaatttttacgagggcgcaaatcaaacagaaaa 44545694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 45323347 - 45323411
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||| ||||||| ||||||||| | ||||||||   ||||||| ||||||||||||||||||||    
T  45323347 aatggtctattaagggtgttttccaaaaaataaaaaatttacgagggtgcaaatcaaaccgaaaa 45323411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 51166806 - 51166742
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| ||||||||    |||||||| ||||||||| ||||||||||||||||||||    
T  51166806 aatgacctattaagggtgtttttcgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 51166742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 51238131 - 51238063
Alignment:
Q  120 ttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttc 188  Q
    |||||||||||||||||||||||||||||||        || ||||||||||||||||  |||||||||    
T  51238131 ttaataggccattcaaaaaccaaaatttcttgaaaaaaattatgaaaatggcctattaggggtgttttc 51238063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 47675326 - 47675397
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||| ||||| |||||||  | |||||||   |||||||| ||||||||| ||||||||||||||||||||    
T  47675326 ttctgtaaatgacctattagggatgttttccgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 47675397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 49613715 - 49613681
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaa 144  Q
    ||||||| |||||||||||||||||||||||||||    
T  49613715 gaaaacatccttaataggccattcaaaaaccaaaa 49613681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 15541589 - 15541653
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||   ||||||||  |||||||| |||||||||||||| |||||    
T  15541589 aatgacctattaagggtgttttccgaaaaataaaagttttacgagggtgcaaatcaaactgaaaa 15541653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 16087308 - 16087372
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||| | ||||| | || |||||||| | ||||||||||| ||||||    
T  16087308 aatggcctattaagggtgttttttggaaaaaatatattttacgaggatgcaaatcaaatcgaaaa 16087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38601330 - 38601394
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  |||||||||  |||||||| |||  |||||||||||||||    
T  38601330 aatgccctattaagggtgttttccggaaaataaagattttacgagggtaaaaatcaaaccgaaaa 38601394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 39886615 - 39886737
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| ||||||||| |||||||    
T  39886615 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagtggtgttttctggaaaataaaatttttac 39886714  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  39886715 gagggtgcaaatcaaaccgaaaa 39886737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 8406100 - 8405979
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||   |||||||| ||||||||||  |||||||    
T  8406100 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggagtgttttccagaaaataaaaattttacg 8406001  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||||    
T  8406000 atggtgcaaatcaaaccgaaaa 8405979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 10690975 - 10690855
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||  |||||||||  |||||||||  ||||||||    
T  10690975 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaatctgaaaatggcctattaggggtgttttccggaaaataaaaattttacga 10690876  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  10690875 gggtgcaaatcaaaccgaaaa 10690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 6143417 - 6143539
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||| |||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||  |||||||||  |||||||||||||||||    
T  6143417 ggaagacacccttaataggccattcaaaaaccaaaattttttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaattttttac 6143516  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  6143517 gagggtgcaaatcaaaccgaaaa 6143539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 13952562 - 13952682
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| |||||||||    
T  13952562 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttacga 13952661  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||| ||||||||||||||    
T  13952662 gggtgccaatcaaaccgaaaa 13952682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 29690569 - 29690689
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| ||||||| |    
T  29690569 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttacaa 29690668  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  29690669 gggtgcaaatcaaaccgaaaa 29690689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 5081577 - 5081699
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  5081577 ggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 5081676  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  5081677 gagggtgcaaatcaaaccgaaaa 5081699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 13892667 - 13892789
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  | |||||||  |||||||||  ||||||    
T  13892667 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagggatgttttccggaaaataaaaattttac 13892766  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  13892767 gagggtgcaaatcaaaccgaaaa 13892789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 21262706 - 21262828
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||||||| |||||||  |||||||||  |||||||||  ||||||    
T  21262706 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatgccctattaggggtgttttccggaaaataaaaattttac 21262805  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  21262806 gagggtgcaaatcaaaccgaaaa 21262828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 12369567 - 12369688
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||  |||||||||  |||||||||  |||||||    
T  12369567 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattatgaaaatggcctattaggggtgttttccggaaaataaaaattttacg 12369666  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  12369667 agggtgcaaatcaaaccgaaaa 12369688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 20352815 - 20352694
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  |||||||    
T  20352815 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttacg 20352716  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | |||| |||||||||||||||    
T  20352715 agggtgtaaatcaaaccgaaaa 20352694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 23294609 - 23294730
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||| ||||||||||||||||||||||||||||||||        |||| ||||||||||||| |  |||||||  ||||||||||  |||||||    
T  23294609 ggaaaacactcttaataggccattcaaaaaccaaaatttcttgaaaaaaattctaaaaatggcctatttagagtgtttttcagaaaataaaaattttacg 23294708  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  23294709 agggtgcaaatcaaaccgaaaa 23294730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 26404983 - 26405103
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  |||||||||   |||| |||| ||||||     
T  26404983 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgacaaaaattctgaaaatggcctattaggggtgttttccccaaaa-aaatattttaca 26405081  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  26405082 agggtgcaaatcaaaccgaaaa 26405103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 38678281 - 38678401
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        || ||||||||||||||||   ||||||||   |||||||| ||||||||    
T  38678281 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaattttttt-tgaaaatggcctattaggagtgttttccgaaaaataaaatttttacg 38678379  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  38678380 agggtgcaaatcaaaccgaaaa 38678401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 14946508 - 14946628
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||| ||||||||||         |||||||||||||||||||  |||||||||| ||| |||||  ||||||||    
T  14946508 aaaacacccttaataggccattcaaaaacaaaaatttcttgaaaaaatattctgaaaatggcctattaggggtgttttctggaatataaaaattttacga 14946607  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  14946608 gggtgcaaatcaaaccgaaaa 14946628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 34974183 - 34974064
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||| ||||||| || |||||||| ||||||||||    
T  34974183 aaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaaaaattcttaaaatggcctattaagggtgttt-ctggaaaataatttttttacga 34974085  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     |||||||||||||| |||||    
T  34974084 gggtgcaaatcaaactgaaaa 34974064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 3922793 - 3922912
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||| ||||||||| ||||||||||  ||||||||     
T  3922793 aaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaagggtgttttccagaaaataaaaattttacgag 3922892  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    |   ||||||||||| ||||    
T  3922893 gacacaaatcaaaccaaaaa 3922912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 7884962 - 7884839
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaa-tttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||  ||||||||||||||  |||||||||  ||||||||| |||||||    
T  7884962 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaatttttttccaaaaatggcctattaggggtgttttccggaaaataaattttttta 7884863  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  7884862 cgagggtgcaaatcaaaccgaaaa 7884839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 11762431 - 11762309
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt-ctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||| ||||||||||||||||||||||||||||||||        || |||||||||||||||||  |||||||||  |||||| ||  ||||||    
T  11762431 ggaaaacactcttaataggccattcaaaaaccaaaatttcttgaaatttttttctgaaaatggcctattaggggtgttttccggaaaatgaaaattttac 11762332  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  11762331 gagggtgcaaatcaaaccgaaaa 11762309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 16867862 - 16867984
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||| |||||||||||||||||||||||||||||||||||         ||||||||||| |||||||  |||||||||   ||||||||  ||||||    
T  16867862 ggaaaatacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatgacctattaggggtgttttccgaaaaataaaaattttac 16867961  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||||||    
T  16867962 gatggtgcaaatcaaaccgaaaa 16867984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 18618441 - 18618319
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  18618441 ggaaaacacccttaatagaccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 18618342  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||| ||||    
T  18618341 gagggtgcaaatcaaaccaaaaa 18618319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 21000456 - 21000578
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||         |||||||||| ||||||||  ||||||||   ||||||||| |||||||    
T  21000456 ggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaattgcctattaggggtgtttttcggaaaataaaatttttac 21000555  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  21000556 gagggtgcaaatcaaaccgaaaa 21000578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 20884135 - 20884258
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt--tctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||||||||||||||||||||||||| |||||||||||           ||||||||||||||||||  |||||||||  |||||||||  |||||    
T  20884135 ggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaaaaaaatctgaaaatggcctattaggggtgttttccggaaaataaacatttta 20884234  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  20884235 cgagggtgcaaatcaaaccgaaaa 20884258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 22634219 - 22634341
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||  |||||||||||||||||||||||||||||||         |||||||||||||||||||  | ||||||| ||||||||||  ||||||    
T  22634219 ggaaaacacttttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattatggatgttttccagaaaataaaaattttac 22634318  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |||| |||||||||||||||    
T  22634319 gaaggtgtaaatcaaaccgaaaa 22634341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 7884939 - 7885003
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  7884939 aatggcctattaagggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 7885003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 10690953 - 10691017
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||    
T  10690953 aatggcctattaagggtgttttctggaaaataaattttttacgagggtgcaaatcaaactgaaaa 10691017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 30126629 - 30126506
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||| |||||||| ||||||||||||||||||||||||          |||||||||||||||||||   ||||||||  ||||||||| ||||||    
T  30126629 ggaaaacatccttaataagccattcaaaaaccaaaatttcttggaaaaaaaattctgaaaatggcctattaggagtgttttccggaaaataaaattttta 30126530  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    | | ||||||||||||||||||||    
T  30126529 caagggtgcaaatcaaaccgaaaa 30126506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 37064477 - 37064406
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||  |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  37064477 ttctgaaaatggcctattatgggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 37064406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 40616378 - 40616260
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||| ||||||||||  ||| | |||    ||||||     
T  40616378 aaaacacccttaataggtcattcaaaaaccaaaatttctt-gaaaaaattctgaaaatggcctattagaggtgttttccggaagaaaaaaaaattacgag 40616280  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||    
T  40616279 ggtgcaaatcaaaccgaaaa 40616260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 18805345 - 18805224
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||| ||| ||         |||||||||||||||||||  |||||||||  |||||||||   ||||||    
T  18805345 gaaaacacccttaataggccattcaaaaaccaaatttttttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaaatttacg 18805246  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | | ||||||||||||||||||    
T  18805245 aggatgcaaatcaaaccgaaaa 18805224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 18805323 - 18805387
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  18805323 aatggcctattaagggtgttttctggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 18805387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 20352793 - 20352857
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  20352793 aatggcctattaagggtgttttctggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 20352857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 2841861 - 2841746
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||      |        |||||||||||||||||||  |||||||||| |||||||||  |||||||    
T  2841861 ggaaaacacccttaataggccattcaaaaaccaaa------ttaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaattttacg 2841768  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | |||| |||||| ||||||||    
T  2841767 agggtgtaaatcagaccgaaaa 2841746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 10831893 - 10831970
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttc 188  Q
    |||||||| ||||||||| |||||||||||||||||||||        |||||||||||||||||||| |||||||||    
T  10831893 aaaacacctttaataggctattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaagggtgttttc 10831970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 13003898 - 13003939
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13003898 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 13003939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 13078554 - 13078595
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13078554 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 13078595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 27451398 - 27451439
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27451398 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 27451439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 27706896 - 27706835
Alignment:
Q  330 ttacaccttaaattgacaaaaacacccttaattccttctctaattttcaattattacccttt 391  Q
    ||||||| |||||||| ||||||||||| || ||||| ||||||||||||||||||||||||    
T  27706896 ttacaccctaaattgataaaaacaccctcaactccttttctaattttcaattattacccttt 27706835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 2841838 - 2841902
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||| |||||||||| ||||||||||||||| ||||    
T  2841838 aatggcctattaagggtgttttccggaaaataatttttttacgaaggtgcaaatcaaaccaaaaa 2841902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 5081600 - 5081536
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||  ||||||||||||||||||| |||| |||||||||||||||    
T  5081600 aatggcctattaaggatgttttccggaaaataaattttttacgagggtgaaaatcaaaccgaaaa 5081536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 8406078 - 8406142
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| |||| |||||||||||||||    
T  8406078 aatggcctattaagggtgttttctggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 8406142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 12369589 - 12369525
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||| ||  |||||||| ||||||||||||||||||||    
T  12369589 aatggcctattaagggtgttttctggaaaatcaaaattttacgagggtgcaaatcaaaccgaaaa 12369525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 13892690 - 13892626
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| |||||| || ||||||||||||||||||||    
T  13892690 aatggcctattaagggtgttttccggaaaataaaatttttatgagggtgcaaatcaaaccgaaaa 13892626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 14435784 - 14435744
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14435784 gaaaacacccttaataggccattcaaaaaccaaaatttctt 14435744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21262729 - 21262665
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||||||||| || ||||||||||||||||||||    
T  21262729 aatggcctattaagggtgttttccgaaaaataaattttttaagagggtgcaaatcaaaccgaaaa 21262665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 26006638 - 26006574
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||    |||||||||||||||||| ||||||||||||||||||||    
T  26006638 aatggcctattaagggtgtttttcgaaaaataaattttttacgagggtgcaaatcaaaccgaaaa 26006574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 27316188 - 27316065
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttc--tagaaaataaatttttta 206  Q
    ||||||| |||||||||||||||||||||||||||||||||         |||| |||||||| |||||  |||||||||   |||||| ||| | ||||    
T  27316188 gaaaacatccttaataggccattcaaaaaccaaaatttcttgaaatttttttctaaaaatggcttattaggggtgttttccgaagaaaaaaaaatattta 27316089  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  27316088 cgagggtgcaaatcaaaccgaaaa 27316065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 29989647 - 29989525
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt---nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||| |||||||||||||||||||||||||||||||||            ||||||||||||||||||  ||||||||    |||||||| |||||||    
T  29989647 aaaacaaccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaaaatctgaaaatggcctattaggggtgtttttcgaaaaataaaatttttac 29989548  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||| ||||    
T  29989547 gagggtgcaaatcaaaccaaaaa 29989525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 39886638 - 39886574
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  39886638 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 39886574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 6802256 - 6802217
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6802256 aaaacacccttaataggccattcaaaaaccaaaatttctt 6802217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 26006617 - 26006656
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26006617 aaaacacccttaataggccattcaaaaaccaaaatttctt 26006656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 27830059 - 27830098
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27830059 aaaacacccttaataggccattcaaaaaccaaaatttctt 27830098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 5105202 - 5105243
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  5105202 ggaaaacatccttaataggccattcaaaaaccaaaatttctt 5105243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 25881164 - 25881099
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaac 224  Q
    |||||||||||||||||||  |||||||||   ||||||||  |||||||||||||||||||||||    
T  25881164 ttctgaaaatggcctattaggggtgttttccgaaaaataaaaattttacgatggtgcaaatcaaac 25881099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6143440 - 6143376
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||| |||  |||||||||  |||||||| ||||||||||||||||||||    
T  6143440 aatggcctattaagggtgtcttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 6143376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 11762408 - 11762472
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||  ||||||||   ||||||| |||||||||| ||||||||||||||||||||    
T  11762408 aatggcctattaagagtgttttccgaaaaataatttttttacgagggtgcaaatcaaaccgaaaa 11762472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 26405006 - 26404942
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  | |||||| ||||||||||||||||||||    
T  26405006 aatggcctattaagggtgttttccggaaaataaaaatgttacgagggtgcaaatcaaaccgaaaa 26404942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 27451421 - 27451357
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  27451421 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 27451357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 27830080 - 27830016
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  27830080 aatggcctattaagggtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 27830016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 36873108 - 36873172
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| | ||||||| | |||||||||||||||||| | ||||||||||||||||||    
T  36873108 aatgacctattaaggatgttttccaaaaaataaattttttacgaggatgcaaatcaaaccgaaaa 36873172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 38678304 - 38678240
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||||| ||||    
T  38678304 aatggcctattaagggtgttttccggaaaataaaatttttacgagggtgaaaatcaaaccaaaaa 38678240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 22833499 - 22833538
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  22833499 aaaacacccttaataggccattcaaaaaccataatttctt 22833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 5824499 - 5824540
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  5824499 ggaaaatacccttaattggccattcaaaaaccaaaatttctt 5824540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 25591139 - 25591203
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaa-taaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||| || |||||||| ||||||| |||| ||||||||| ||||||||||||||||||||    
T  25591139 aatggcctataaagggtgtttt-tagaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 25591203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 6802235 - 6802299
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||| |  ||||||||  ||||| || ||||||||||||||||||||    
T  6802235 aatggcctattaagggtgttttttgaaaaataaaaattttatgagggtgcaaatcaaaccgaaaa 6802299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 14946529 - 14946465
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||| | |||||||||  |||||||| |||| ||||||||| |||||    
T  14946529 aatggcctattaagggtgttttttggaaaataaaaattttacgagggtgaaaatcaaactgaaaa 14946465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21000479 - 21000415
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  21000479 aatggcctattaaggatgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 21000415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22634242 - 22634178
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||| ||||||||   ||||||||  |||||||| |||| |||||||||||||||    
T  22634242 aatggcctattaaaagtgttttccgaaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 22634178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22833520 - 22833457
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||| | |||||||||  ||||| || ||||||||||||||||||||    
T  22833520 aatggcctattaagggtgttttatggaaaataaa-attttatgagggtgcaaatcaaaccgaaaa 22833457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 40616357 - 40616421
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| ||||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  40616357 aatgacctattaagggtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 40616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 25591160 - 25591121
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  25591160 aaaacaccctttataggccattaaaaaaccaaaatttctt 25591121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 38941526 - 38941564
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  38941526 aaaacaccctta-taggccattcaaaaaccaaaatttctt 38941564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 36873132 - 36873090
Alignment:
Q  108 tggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||    
T  36873132 tggaaaacatccttaataggtcattcaaaaactaaaatttctt 36873090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 147
Target Start/End: Original strand, 13079552 - 13079581
Alignment:
Q  118 ccttaataggccattcaaaaaccaaaattt 147  Q
    ||||||||||||||||||||||||||||||    
T  13079552 ccttaataggccattcaaaaaccaaaattt 13079581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 19635017 - 19635074
Alignment:
Q  173 tattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||| ||||||||||  |||||||| |||||| || ||||| ||||||||||||||    
T  19635017 tattaagggtgttttctgaaaaataaaatttttatgagggtgctaatcaaaccgaaaa 19635074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 27316166 - 27316223
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaa 223  Q
    ||||||||||||| | ||||||||  ||||||||  |||||||| |||||||||||||    
T  27316166 aatggcctattaaggatgttttctgaaaaataaaaattttacgagggtgcaaatcaaa 27316223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 16867885 - 16867821
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||| |||||  |||||||||   |||||||  |||||||||||||||||||    
T  16867885 aatggcctattaagggtattttccggaaaataaaaaatttacgagagtgcaaatcaaaccgaaaa 16867821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30126606 - 30126670
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||| |||||| | |||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  30126606 aatggcttattaaggatgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 30126670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 24721303 - 24721181
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||| |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  24721303 ggaaaacacctttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaaaggtgttttccggaaaataatttttttac 24721204  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  24721203 gagggtgcaaatcaaaccgaaaa 24721181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 49817702 - 49817822
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||||  |||||||| |||||||||    
T  49817702 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgttttctgaaaaataaaatttttacga 49817801  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||    
T  49817802 ggatgcaaatcaaaccgaaaa 49817822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 3526722 - 3526600
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  ||||||||   |||||||||||||||||    
T  3526722 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaataaattttttac 3526623  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  3526622 gagggtgcaaatcaaaccgaaaa 3526600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 11914941 - 11915065
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||  |||||||||  ||||||||| |||||    
T  11914941 ctggaaaacacccttaataggccattcaaaaaccaaaattttttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaattttt 11915040  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||||    
T  11915041 acgagggtgcaaatcaaaccgaaaa 11915065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 55120721 - 55120840
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  |||||||||   ||||||||  ||||||||     
T  55120721 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgttttccgaaaaataaaaattttacgag 55120820  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||    
T  55120821 ggtgcaaatcaaaccgaaaa 55120840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 30751360 - 30751238
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||  |||||||||  ||||||    
T  30751360 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctaaaaatggcctattaaaggtgttttccggaaaataaaaattttac 30751261  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||| ||||||||    
T  30751260 gagggtgcaaatcacaccgaaaa 30751238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 38560199 - 38560077
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||  |||||||||  |||||     
T  38560199 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgttttccggaaaataaaaattttat 38560100  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  38560099 gagggtgcaaatcaaaccgaaaa 38560077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 39825627 - 39825505
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  39825627 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaataattctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 39825528  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  39825527 gagggtgcaaatcaaaccgaaaa 39825505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 37585738 - 37585859
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||| ||||||||||| |||||||||||        ||||||||| |||||||||  |||||||||| |||||||||  |||||||    
T  37585738 ggaaaacacccttaatagaccattcaaaaatcaaaatttcttgaaaaaaattctgaaaaaggcctattaggggtgttttctggaaaataaaaattttacg 37585837  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  37585838 agggtgcaaatcaaaccgaaaa 37585859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 7014909 - 7014790
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    |||||||||||||||||||||| |||||||||||||||||        || |||||||| |||||||  |||||||||| |||||||||  ||||||||     
T  7014909 aaaacacccttaataggccatttaaaaaccaaaatttcttgaaaaaaattatgaaaatgacctattaggggtgttttctggaaaataaaaattttacgag 7014810  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||    
T  7014809 ggtgcaaatcaaaccgaaaa 7014790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 25025103 - 25024984
Alignment:
Q  112 aaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    |||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| |||||||||  ||||||||     
T  25025103 aaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaattttacgag 25025004  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||    
T  25025003 ggtccaaatcaaaccgaaaa 25024984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 5154880 - 5154758
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaat-aaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||  |||||||||   ||||| |||||||||||    
T  5154880 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaatctgaaaatggcctattaggggtgttttccgaaaaataaaattttttac 5154781  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  5154780 aagggtgcaaatcaaaccgaaaa 5154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 8127988 - 8128110
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||| ||||||  |||  ||||    
T  8127988 ctggaaaacacccctaataggccattcaaaaaccaaaatttctt-aaaaaaattctgaaaatggcctattaggggtgttttccagaaaaataataattta 8128086  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  8128087 cgagggtgcaaatcaaaccgaaaa 8128110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 21802314 - 21802436
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt-tctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||||||||   |||||||| |||||||    
T  21802314 ggaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaagaaaatctgaaaatggcctattagaggtgttttccgaaaaataaaatttttac 21802413  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  21802414 aagggtgcaaatcaaaccgaaaa 21802436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 52866062 - 52866184
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| |||||||||  ||||||    
T  52866062 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaattttac 52866161  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||  ||||||||||||||||    
T  52866162 gagggaacaaatcaaaccgaaaa 52866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 7731450 - 7731338
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||  |||||||||  |||||||||  ||||||||     
T  7731450 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatgacctattaggggtgttttccggaaaataaaaattttacgag 7731351  T
Q  211 ggtgcaaatcaaa 223  Q
    |||||||||||||    
T  7731350 ggtgcaaatcaaa 7731338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 5047350 - 5047228
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  || |||||   |||||||||  ||||||    
T  5047350 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggggtttttcggaaaataaaaattttac 5047251  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  5047250 gagggtgcaaatcaaaccgaaaa 5047228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 15539980 - 15540101
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaat-tttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||         ||| |||||||||||||||||||||||||  ||||| ||||  ||||||    
T  15539980 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaatctaaaaatggcctattaaaggtgttttc-cgaaaaaaaataattttac 15540078  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  15540079 gagggtgcaaatcaaaccgaaaa 15540101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 33312437 - 33312559
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||   |||||||||  ||||||    
T  33312437 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgtttttcggaaaataaaaattttac 33312536  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    ||||   ||||||||||||||||    
T  33312537 gatgacacaaatcaaaccgaaaa 33312559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 39937200 - 39937077
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt---nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||           |||||||||| ||||||||  ||||||||| ||||||||||  ||||    
T  39937200 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaatattctgaaaat-gcctattaggggtgttttccagaaaataaaaatttt 39937102  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||||    
T  39937101 acgagggtgcaaatcaaaccgaaaa 39937077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 25484220 - 25484341
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcct-attaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||| |||||||||||||||||||||||||||||||         ||||||||||||||| ||||  |||||||||| ||||||||| ||||||||    
T  25484220 aaaacaccgttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggccttattaggggtgttttctggaaaataaaatttttacg 25484319  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||| ||||||    
T  25484320 agggtgcaaatcaaaacgaaaa 25484341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 54014739 - 54014618
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||         ||||||||||||||||||  ||| ||||   |||||||||  |||||||    
T  54014739 ggaaaacacccttaatagggcattcaaaaaccaaaatttcttgaaaaaaaatctgaaaatggcctattaggggtatttttcggaaaataaaaattttacg 54014640  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  54014639 agggtgcaaatcaaaccgaaaa 54014618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 21015344 - 21015464
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||| ||||||||||  |||||||||  ||||||||    
T  21015344 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaatctaaaaatggcctattagaggtgttttccggaaaataaaaattttacga 21015443  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||| ||||    
T  21015444 gggtgcaaatcaaaccaaaaa 21015464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 9268675 - 9268797
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||| |||||||| ||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||   |||||    
T  9268675 ggaaaacacctttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaaatttac 9268774  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  9268775 gagggtgcaaatcaaaccgaaaa 9268797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 8764002 - 8764123
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||| |||||||||| ||||||||||||||||||||||         || ||||||||||||||||  |||||||||  |||||||||  |||||||    
T  8764002 gaaaacatccttaataggtcattcaaaaaccaaaatttcttcaaaaaaaattatgaaaatggcctattaggggtgttttccggaaaataaaaattttacg 8764101  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  8764102 agggtgcaaatcaaaccgaaaa 8764123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 40003979 - 40004092
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||||||| |||||||  |||||||||  |||||||||  ||||||||    
T  40003979 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatgacctattaggggtgttttccggaaaataaaaattttacga 40004078  T
Q  210 tggtgcaaatcaaa 223  Q
     |||||||||||||    
T  40004079 gggtgcaaatcaaa 40004092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 2986027 - 2986150
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt--tctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||           ||||||||| ||||||||  ||||||||   |||||||| |||||||    
T  2986027 ggaaaacacccttaatatgccattcaaaaaccaaaatttcttgaaaaaaaaaatctgaaaattgcctattaggggtgtttttcggaaaataattttttta 2986126  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  2986127 cgagggtgcaaatcaaaccgaaaa 2986150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 9268698 - 9268634
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  9268698 aatgacctattaaaggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 9268634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 55120742 - 55120678
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  55120742 aatggcctattaagggtgttttttggaaaataaattttttacgatggtgcaaatcaaacagaaaa 55120678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 6019500 - 6019591
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||  |||||||||    
T  6019500 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaacaaattctgaaaatggcctattaagggtgttttccggaaaataaa 6019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 7862579 - 7862466
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    ||||||||||||||||||||||||||||||||||||||||        || ||||||||| ||||||    |||||||| |||||||||  ||||||||     
T  7862579 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattatgaaaatggtctattaggaatgttttctggaaaataaa-attttacgag 7862481  T
Q  211 ggtgcaaatcaaacc 225  Q
    |||||||||||||||    
T  7862480 ggtgcaaatcaaacc 7862466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 12998881 - 12998759
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||| ||||||||||||| ||||| |||||||||||         || ||||||||||||||||  |||||||||  |||||||||  ||||||    
T  12998881 ggaaaacacctttaataggccatttaaaaatcaaaatttcttgaaaaaacattatgaaaatggcctattaggggtgttttccggaaaataaaaattttac 12998782  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  12998781 gagggtgcaaatcaaaccgaaaa 12998759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 13207591 - 13207634
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13207591 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt 13207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 26996124 - 26996244
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttct--gaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||   |||||||||||||||||||||||||        || |  |||||||||||||||| |||||||||  |||||||||  |||||    
T  26996124 ggaaaacaccctta---ggccattcaaaaaccaaaatttcttgaatttttttttatgaaaatggcctattaagggtgttttccggaaaataaaaatttta 26996220  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||| ||||    
T  26996221 cgaaggtgcaaatcaaaccaaaaa 26996244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 12998857 - 12998922
Alignment:
Q  165 aaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  12998857 aaatggcctattaaaggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 12998922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 32858254 - 32858295
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32858254 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 32858295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 40717458 - 40717499
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40717458 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 40717499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 53050032 - 53050073
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  53050032 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 53050073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 2148704 - 2148581
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt--tctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||| ||||||||| ||||||||||| |||||||||||           |||||||||||||||||||  ||||||||  ||||||||| ||||||    
T  2148704 ggaaaacatccttaatagaccattcaaaaatcaaaatttcttaaaaaaaaaaatctgaaaatggcctattaagagtgttttccggaaaataaaattttta 2148605  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
     || |||||||||||||| |||||    
T  2148604 tgagggtgcaaatcaaactgaaaa 2148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 5047327 - 5047391
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||||||||| || ||||||||||||||||||||    
T  5047327 aatggcctattaagggtgttttccgaaaaataaattttttatgagggtgcaaatcaaaccgaaaa 5047391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 16343761 - 16343697
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||  |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  16343761 aatggcctattaggggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 16343697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21802337 - 21802273
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  21802337 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 21802273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 24721280 - 24721344
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  24721280 aatggcctattaaaggtgttttccgaaaaataaaaattttacgaaggtgcaaatcaaaccgaaaa 24721344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 25484241 - 25484177
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   ||||||||| ||||||||| ||||||||||||||||||||    
T  25484241 aatggcctattaacggtgtttttcggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 25484177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30751337 - 30751401
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  30751337 aatggcctattaagggtgttttccggaaaataaaaattttacgaaggtgcaaatcaaaccgaaaa 30751401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 32858277 - 32858213
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||  |||||||||||||||    
T  32858277 aatggcctattaagggtgttttccggaaaataaattttttacgagggtctaaatcaaaccgaaaa 32858213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 52866085 - 52866021
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||| |||||||||| ||||||||||||||||||||    
T  52866085 aatggcctattaagggtgttttccgaaaaataatttttttacgagggtgcaaatcaaaccgaaaa 52866021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 24234188 - 24234150
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24234188 ggaaaacacccttaataggccattcaaaaaccaaaattt 24234150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 7014887 - 7014952
Alignment:
Q  165 aaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||| |||||||| |  ||||||||  |||||||| ||||||||||||||||||||    
T  7014887 aaatggcctattaagggtgttttttgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 7014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 16871357 - 16871316
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  16871357 ggaaaacacccctaataggccattcaaaaaccaaaatttctt 16871316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 2986050 - 2985986
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||| |||||| |||||||||   |||||||| ||||||||| ||||||||||||||||||||    
T  2986050 aatggcatattaagggtgttttccgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 2985986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 3526699 - 3526763
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||   ||||||| ||||||||||||||||||||    
T  3526699 aatggcctattaagggtgttttccggaaaataaaaaatttacgagggtgcaaatcaaaccgaaaa 3526763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 5154857 - 5154921
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  5154857 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 5154921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 8128013 - 8127949
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||| |||| |||||||||||||||    
T  8128013 aatggcctattaggggtgttttccagaaaataaaattttttcgagggtgtaaatcaaaccgaaaa 8127949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 11914966 - 11914902
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||| |||| |||| ||||||||||    
T  11914966 aatggcctattaagggtgttttccagaaaataaaaattttacgagggtgaaaattaaaccgaaaa 11914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 15540003 - 15539939
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||   |||||||| ||||||||| ||||||||||||||||||||    
T  15540003 aatgacctattaagggtgttttccgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 15539939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 18546558 - 18546435
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt--nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||| |||||||||| ||||||||||||||||||||||           ||||||||||||||||||  ||| ||||   |||||||||  |||||    
T  18546558 ggaaaacatccttaatagggcattcaaaaaccaaaatttcttgaaaaaaaaaatctgaaaatggcctattaggggtatttttcggaaaataaaaatttta 18546459  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
     || ||||||||||||||||||||    
T  18546458 tgagggtgcaaatcaaaccgaaaa 18546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 37585761 - 37585697
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||| ||||||| |||||||||   |||||||| |||||| |||||||||||||||||||||||    
T  37585761 aatggtctattaagggtgttttccgaaaaataaaatttttatgatggtgcaaatcaaaccgaaaa 37585697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 39825604 - 39825668
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  39825604 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 39825668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 49817724 - 49817661
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  49817724 aatggcctattaagggtgttttcg-gaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 49817661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 43674292 - 43674242
Alignment:
Q  180 ggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  43674292 ggtgttttccggaaaataaattttttacaagggtgcaaatcaaaccgaaaa 43674242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 13207616 - 13207551
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaa-taaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| |||||| ||||  |||||||| | ||||||||||||||||||    
T  13207616 aatggcctattaagggtgttttccagaaaaataaaaattttacgaggatgcaaatcaaaccgaaaa 13207551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 7731429 - 7731493
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  |||||||| | ||||||||||||||||||    
T  7731429 aatggcctattaagggtgtttttcggaaaataaaaattttacgaggttgcaaatcaaaccgaaaa 7731493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 19271720 - 19271756
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaat 145  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19271720 ggaaaacactcttaataggccattcaaaaaccaaaat 19271756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38560176 - 38560240
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||| |  |||||||||||| ||||||    
T  38560176 aatggcctattaagggtgttttccggaaaataaaatttttacaagagtgcaaatcaaatcgaaaa 38560240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 39937177 - 39937241
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||| ||||||    
T  39937177 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaatcgaaaa 39937241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 54014716 - 54014780
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  54014716 aatgccctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 54014780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 7862558 - 7862622
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||    ||||||||  |||||||| ||||||||| ||||||||||    
T  7862558 aatggcctattaagggtgtttttcgaaaaataaaaattttacgagggtgcaaattaaaccgaaaa 7862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 8764024 - 8763960
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| | |||||||| |||||||||  |||||||| |||  |||||||||||||||    
T  8764024 aatgacctattaaggatgttttctggaaaataaaaattttacgagggttgaaatcaaaccgaaaa 8763960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 14746221 - 14746273
Alignment:
Q  340 aattgacaaaaacacccttaattccttctctaattttcaattattaccctttg 392  Q
    |||||||| |||||||||||||||||| |  ||||||||| ||||| ||||||    
T  14746221 aattgacataaacacccttaattcctttttaaattttcaactattatcctttg 14746273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 16871334 - 16871398
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||  |||||||||   ||||||||  |||||||| |||||||||||||| |||||    
T  16871334 aatggcctattaggggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaactgaaaa 16871398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21015365 - 21015301
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||   ||||||| |||| |||||||||||||||    
T  21015365 aatggcctattaagggtgtttttcggaaaataaaaagtttacgagggtgaaaatcaaaccgaaaa 21015301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 25025083 - 25025147
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||| |  |||||||||  |||||| | |||||||||||| |||||||    
T  25025083 aatggcctattaagggtgtttcccggaaaataaaaattttacaagggtgcaaatcaatccgaaaa 25025147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 40004000 - 40003936
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  ||||||||   ||||||||||||||||||    
T  40004000 aatggcctattaagggtgtttttcggaaaataaaaattttacgagattgcaaatcaaaccgaaaa 40003936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 11944 - 12065
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||  |||||||||  |||||||    
T  11944 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaagggtgttttccggaaaataaaaattttacg 12043  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | || |||||||||||||||||    
T  12044 agggcgcaaatcaaaccgaaaa 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 11967 - 11903
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| || |||||||||||||||||    
T  11967 aatggcctattaagggtgttttccggaaaataaaaattttacgagggcgcaaatcaaaccgaaaa 11903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 93)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 20513771 - 20513892
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||  ||||||||| | ||||||||  |||||||    
T  20513771 ggaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaaaattctgaaaatgacctattaggggtgttttccaaaaaataaaaattttacg 20513870  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||||    
T  20513871 atggtgcaaatcaaaccgaaaa 20513892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 25301411 - 25301534
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||| |||||| ||||||||||| |||||| |||||||||    
T  25301411 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaattctgaaaatgggctattagaggtgttttctggaaaattaatttttta 25301510  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  25301511 cgagggtgcaaatcaaaccgaaaa 25301534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 36202220 - 36202343
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  | |||||||| |||||||||  |||||    
T  36202220 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattagggatgttttctggaaaataaaaatttta 36202319  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||| ||||||    
T  36202320 cgagggtgcaaatcaaatcgaaaa 36202343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 25890650 - 25890771
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| ||||||||    
T  25890650 gaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaaaacttctgaaaatggcctattaggggtgttttccggaaaataaaatttttacg 25890749  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  25890750 agggtgcaaatcaaaccgaaaa 25890771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 12883182 - 12883306
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||    
T  12883182 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaatttt 12883281  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||||    
T  12883282 acgagggtgcaaatcaaaccgaaaa 12883306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 5513587 - 5513707
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| |||||||||  ||||||||    
T  5513587 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaattttacga 5513686  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||    
T  5513687 ggatgcaaatcaaaccgaaaa 5513707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 20891777 - 20891657
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||| |||||||||||||||||||||||||||||||||        || ||||||| ||||||||  |||||||||  |||||||| ||||||||||    
T  20891777 gaaaacatccttaataggccattcaaaaaccaaaatttcttgaatttttttttgaaaatagcctattaggggtgttttccggaaaataatttttttacga 20891678  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  20891677 gggtgcaaatcaaaccgaaaa 20891657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 18966863 - 18966741
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||  |||||||||| |||||||||  ||||||    
T  18966863 ggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaattttac 18966764  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||| ||||    
T  18966763 gagggtgcaaatcaaaccaaaaa 18966741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 20100942 - 20100820
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  ||||||||||  ||||||||  ||||||    
T  20100942 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctgaaaaataaaaattttac 20100843  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |||| |||||||||||||||    
T  20100842 gagggtgtaaatcaaaccgaaaa 20100820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 34963534 - 34963414
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||   |||||||| |||||||||    
T  34963534 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccgaaaaataaaatttttacga 34963435  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||| ||||||    
T  34963434 gggtgcaaatcaaagcgaaaa 34963414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 39615764 - 39615644
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| |||||||||  ||||||||    
T  39615764 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaattttacga 39615665  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||| ||||    
T  39615664 ggatgcaaatcaaaccaaaaa 39615644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 396926 - 397040
Alignment:
Q  117 cccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgc 215  Q
    ||||||||||||||||||||||||||||||||||         |||||||||||||||||||  ||||||||||  ||||||||  |||||||| |||||    
T  396926 cccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttctgtaaaataaaaattttacgagggtgc 397025  T
Q  216 aaatcaaaccgaaaa 230  Q
    |||||||||||||||    
T  397026 aaatcaaaccgaaaa 397040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 5529108 - 5528980
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-------ttctgaaaatggcctattaaaggtgttttctagaaaataaatt 201  Q
    |||||||| |||||||||||||||||||||||||||||||||               || |||||||||||||||| ||||||||||| |||||||||||    
T  5529108 ggaaaacatccttaataggccattcaaaaaccaaaatttcttaaaaaaaaaaaattcttttgaaaatggcctattagaggtgttttctggaaaataaatt 5529009  T
Q  202 ttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||| || |||||||||||||||||    
T  5529008 ttttacgagggcgcaaatcaaaccgaaaa 5528980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 20962146 - 20962268
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||| |  |||||||||    
T  20962146 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaattttattttttac 20962245  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || | ||||||||||||||||||    
T  20962246 gaggatgcaaatcaaaccgaaaa 20962268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 44354004 - 44354126
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||||||||||||||||||||| |||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  44354004 ggaaaacacccttaataggccattcaaaaaccaaaaattcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 44354103  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  44354104 aagggtgcaaatcaaaccgaaaa 44354126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 1151332 - 1151215
Alignment:
Q  114 acacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatgg 212  Q
    |||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||| |||||||||  ||||||||| ||||||||| ||    
T  1151332 acacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctaaaaatggcctattaagggtgttttccggaaaataaaatttttacgaggg 1151233  T
Q  213 tgcaaatcaaaccgaaaa 230  Q
    | ||||||||||| ||||    
T  1151232 tacaaatcaaaccaaaaa 1151215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 1320707 - 1320828
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  ||||||||   |||||||||  |||||| |    
T  1320707 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaataaaaattttacaa 1320806  T
Q  210 tggtgcaaatcaaaccgaaaac 231  Q
    || |||||||||||||||||||    
T  1320807 tgatgcaaatcaaaccgaaaac 1320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 43209353 - 43209236
Alignment:
Q  113 aacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatgg 212  Q
    |||||||||||||||| |||||||||||||||||||||        ||||||||||||| |||||  |||||||| | |||||||||  |||||||| ||    
T  43209353 aacacccttaataggcaattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcatattaggggtgttttttggaaaataaaaattttacgaggg 43209254  T
Q  213 tgcaaatcaaaccgaaaa 230  Q
    |||||||||||| |||||    
T  43209253 tgcaaatcaaactgaaaa 43209236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 27927037 - 27927157
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||| ||||||||||  |||||||||  ||||||||    
T  27927037 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaatctaaaaatggcctattagaggtgttttccggaaaataaaaattttacga 27927136  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||| ||||    
T  27927137 gggtgcaaatcaaaccaaaaa 27927157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 22265237 - 22265360
Alignment:
Q  109 ggaaaacaccctt-aataggccattcaaaaaccaaaatttcttnnnnnnnntt-ctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||| || ||||||||||||||||||||||||||        || |||||||||||||||||| ||||||||   |||||||||  |||||    
T  22265237 ggaaaacaccctttaaaaggccattcaaaaaccaaaatttcttgaaatttttttctgaaaatggcctattaagggtgtttttcggaaaataaaaatttta 22265336  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  22265337 cgagggtgcaaatcaaaccgaaaa 22265360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 9273637 - 9273759
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         || |||||||||| |||||| |||||||||| |||||||||  ||||||    
T  9273637 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattatgaaaatggcttattaagggtgttttctggaaaataaaaattttac 9273736  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |   ||||||||||||||||    
T  9273737 gaggacacaaatcaaaccgaaaa 9273759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 13987871 - 13987993
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||         |||||||||||| |||||||||||||||||  ||||||||| |||||||    
T  13987871 ggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatgggctattaaaggtgttttcctgaaaataaaatttttac 13987970  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |   ||||| ||||||||||    
T  13987971 gaggacacaaattaaaccgaaaa 13987993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 13993769 - 13993891
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||         |||||||||||| |||||||||||||||||  ||||||||| |||||||    
T  13993769 ggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatgggctattaaaggtgttttcctgaaaataaaatttttac 13993868  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |   ||||| ||||||||||    
T  13993869 gaggacacaaattaaaccgaaaa 13993891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 30462364 - 30462243
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||| ||||||||||||||||||||||         || ||||||||||||||||   ||||||| | ||||||||| ||||||||    
T  30462364 gaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattatgaaaatggcctattaggtgtgttttttggaaaataaaatttttacg 30462265  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | |||| |||||||||||||||    
T  30462264 agggtgaaaatcaaaccgaaaa 30462243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 1591932 - 1592052
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||| ||||||||||         |||||||||||| ||||||  ||||||||  | |||||||| |||||||||    
T  1591932 aaaacacccttaataggccattcaaaaacaaaaatttcttgaaaaaaaattctgaaaatggtctattaggggtgtttttcaaaaaataaaatttttacga 1592031  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||| ||||    
T  1592032 gggtgcaaatcaaaccaaaaa 1592052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 12883207 - 12883143
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  12883207 aatggcctattaagggtgttttccagaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 12883143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 14274325 - 14274448
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||         |||||||||||||||||| | |||||||||  |||| |  |||||||    
T  14274325 ctggaaaacacccttaataggccattcaaaaaccaaaatttattgaaaaaaaattctgaaaatggcctatt-agggtgttttccggaaattttatttttt 14274423  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||| ||||    
T  14274424 acgagggtgcaaatcaaaccaaaaa 14274448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 36202245 - 36202181
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  36202245 aatggcctattaagggtgttttccagaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 36202181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 24388713 - 24388828
Alignment:
Q  116 acccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtg 214  Q
    |||||||||||||||||||||||||||||||||||         |||| ||||||||||||||  |||||||||  ||||||||| ||||||| |  |||    
T  24388713 acccttaataggccattcaaaaaccaaaatttcttaaaaaaaaattctaaaaatggcctattaggggtgttttccggaaaataaaatttttacaagagtg 24388812  T
Q  215 caaatcaaaccgaaaa 230  Q
    ||||||||||||||||    
T  24388813 caaatcaaaccgaaaa 24388828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 7511530 - 7511408
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||| ||         || ||||||||||||||||  | ||||||   |||||||||  ||||||    
T  7511530 ggaaaacacccttaataggccattcaaaaaccaaaattttttgaaaaaattttatgaaaatggcctattagggatgttttacggaaaataaaagttttac 7511431  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  7511430 gagggtgcaaatcaaaccgaaaa 7511408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 7515814 - 7515692
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||| ||         || ||||||||||||||||  | ||||||   |||||||||  ||||||    
T  7515814 ggaaaacacccttaataggccattcaaaaaccaaaattttttgaaaaaattttatgaaaatggcctattagggatgttttacggaaaataaaagttttac 7515715  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  7515714 gagggtgcaaatcaaaccgaaaa 7515692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 13236957 - 13236833
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn---ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    |||||||||||||||||||| ||||||||| |||||||||||           |||| ||||||||||||||  |||||||||  ||||| |||| ||||    
T  13236957 ggaaaacacccttaataggctattcaaaaatcaaaatttcttgaaaaaaaaaattctaaaaatggcctattaggggtgttttccggaaaaaaaatatttt 13236858  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||||    
T  13236857 acgagggtgcaaatcaaaccgaaaa 13236833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 20025422 - 20025544
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||| ||         |||||||||||||||||||  |||||||||  |||| |  |||||||||    
T  20025422 ggaaaacatccttaataggccattcaaaaaccaaaatttattgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaattttattttttac 20025521  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |||||||||||||| |||||    
T  20025522 gagggtgcaaatcaaactgaaaa 20025544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 28192480 - 28192358
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||| ||||||||||          |||||||||| |||||||  |||||||||  |||||||||  ||||||    
T  28192480 ggaaaacacccttaataggccattcaaaaacaaaaatttcttgaaaaaaaaatctgaaaatgtcctattaggggtgttttccggaaaataaaaattttac 28192381  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  28192380 aagggtgcaaatcaaaccgaaaa 28192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 5863286 - 5863411
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttct-gaaaatggcctattaaaggtgttttctagaaaataaattttt 204  Q
    |||||||||||||||||||||||||||||||||| ||||||  |         |||| ||||||||||||| |  |||||||||| |||||||||  |||    
T  5863286 ctggaaaacacccttaataggccattcaaaaaccgaaatttagtgaaaaaaaattcttgaaaatggcctatgaggggtgttttctggaaaataaaaattt 5863385  T
Q  205 tacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||| ||||||||||||||||||||    
T  5863386 tacgagggtgcaaatcaaaccgaaaa 5863411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 5863311 - 5863247
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||| ||||||||||||||||||||    
T  5863311 aatggcctattaagggtgttttccagaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 5863247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 6748926 - 6748808
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    |||||| ||||||||||||||||||||| ||||||||||||        |||||||||||||||||||  |||||||||| ||| ||   ||||||||||    
T  6748926 gaaaactcccttaataggccattcaaaa-ccaaaatttcttaaaaaaaattctgaaaatggcctattag-ggtgttttctggaagattttttttttacga 6748829  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||| ||||    
T  6748828 gggtgcaaatcaaaccaaaaa 6748808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 8224571 - 8224491
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||    
T  8224571 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgttttc 8224491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 22422862 - 22422985
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||  ||||||||||||||||||||||||||||||||          |||||||||||||||||||  ||||||||   |||||||||  |||||    
T  22422862 ggaaaacaatcttaataggccattcaaaaaccaaaatttcttgaaaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaataaaaatttta 22422961  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
     || ||||||||||||||||||||    
T  22422962 tgagggtgcaaatcaaaccgaaaa 22422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 24492675 - 24492553
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt--nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||||||||||||||||||||||||| |||||||||||           ||||||||||||||||||  |||||||| ||| |||||||   ||||    
T  24492675 ggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaaaaaaatctgaaaatggcctattaggggtgttttttag-aaataaaaaattta 24492577  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  24492576 cgagggtgcaaatcaaaccgaaaa 24492553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 40926839 - 40926903
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  40926839 aatggcctattaagggtgttttctggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 40926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 3329062 - 3328991
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||| ||||||  ||||||||| ||||||||||  |||||||||||||||||| ||||||||||    
T  3329062 ttctgaaaatgggctattaggggtgttttccagaaaataaaaattttacgatggtgcaaattaaaccgaaaa 3328991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 42335961 - 42336032
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||| |||||||||  |||||||||  ||||| || ||||||||||||||||||||    
T  42335961 ttctgaaaatggcctattaagggtgttttccggaaaataaaaattttatgagggtgcaaatcaaaccgaaaa 42336032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 18115449 - 18115490
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18115449 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 18115490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 2077226 - 2077186
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttct 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2077226 ggaaaacacccttaataggccattcaaaaaccaaaatttct 2077186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 2531927 - 2532050
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    |||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||  | |||||||  ||||| |||| ||||    
T  2531927 ctggaaaacacccttaataggccattcaaaaaccaaaattttgcgaaaaaaaattctgaaaatggcctattagggatgttttccggaaaa-aaatatttt 2532025  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| | ||||||||||||||||||    
T  2532026 acgaggatgcaaatcaaaccgaaaa 2532050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 5513608 - 5513544
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   ||||||||| ||||||||| ||||||||||||||||||||    
T  5513608 aatggcctattaagggtgtttttcggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 5513544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 7511507 - 7511571
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  7511507 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 7511571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 7515791 - 7515855
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  7515791 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 7515855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 14274350 - 14274286
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||| |||| |||||||||||||||    
T  14274350 aatggcctattaagggtgttttccagaaaataaaaattttacgagggtggaaatcaaaccgaaaa 14274286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18115472 - 18115408
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||| ||||    
T  18115472 aatggcctattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccaaaaa 18115408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18756891 - 18756827
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||| || |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  18756891 aatggcctataaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 18756827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 20891755 - 20891819
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  20891755 aatggcctattaaggatgttttctggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 20891819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 20962169 - 20962105
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  20962169 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 20962105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 24388729 - 24388666
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||| |||||||||||||| |||||    
T  24388729 aatggcctattaagggt-ttttctggaaaataaattttttacgaaggtgcaaatcaaactgaaaa 24388666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 26502489 - 26502425
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||| |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  26502489 aatggcttattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 26502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30462342 - 30462406
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  30462342 aatgacctattaagggtgttttctggaaaataaaagttttacgagggtgcaaatcaaaccgaaaa 30462406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 35741227 - 35741110
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    |||||||| |||||||||||||||||||||||||||||||        |||| ||||||||||||||  |||||||||  |  ||||  ||||||||||     
T  35741227 aaaacacctttaataggccattcaaaaaccaaaatttcttgaaaaaaattctaaaaatggcctattaggggtgttttccgg--aatattttttttacgag 35741130  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||| ||||    
T  35741129 gatgcaaatcaaaccaaaaa 35741110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 40926861 - 40926821
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40926861 gaaaacacccttaataggccattcaaaaaccaaaatttctt 40926821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 39257232 - 39257355
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctg-aaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||| ||||||||||||| ||         ||||| ||||||||||||||  |||||||||  |||||||||  |||||    
T  39257232 ggaaaacacccttaataggccattcgaaaaccaaaattttttgaaaaaaaattctgaaaaatggcctattaggggtgttttccggaaaataaaaatttta 39257331  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||| |||||| |||||    
T  39257332 cgagggtgcaagtcaaactgaaaa 39257355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 6748904 - 6748962
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaac 224  Q
    ||||||||||||| || ||||||| ||||||||| ||||||||| ||||||||||||||    
T  6748904 aatggcctattaagggagttttctggaaaataaaatttttacgagggtgcaaatcaaac 6748962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 33216571 - 33216533
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33216571 ggaaaacacccttaataggccattcaaaaaccaaaattt 33216533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 35192283 - 35192325
Alignment:
Q  108 tggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  35192283 tggaaaacacccttaataggccattcaaaaatcaaaatttctt 35192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 18756868 - 18756909
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  18756868 ggaaaacaccctttataggccattcaaaaaccaaaatttctt 18756909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 18817371 - 18817330
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18817371 ggaaaacacccttaataggtcattcaaaaaccaaaatttctt 18817330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22265261 - 22265196
Alignment:
Q  166 aatggcctattaaagg-tgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||| ||||||| |||||||  |||||||||  |||||||||||||||||||||||||||||    
T  22265261 aatggccttttaaagggtgttttccggaaaataaaaattttacgatggtgcaaatcaaaccgaaaa 22265196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 1151314 - 1151378
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||| ||   ||||||||| ||||||||| ||||||||||||||||||||    
T  1151314 aatggcctattaagggtgtctttcggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 1151378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 1320728 - 1320664
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||    ||||||||  |||||||||||||||||||||||||||||    
T  1320728 aatggcctattaagggtgtttttcgaaaaataaaaattttacgatggtgcaaatcaaaccgaaaa 1320664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 5529085 - 5529149
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||   |||||||| ||||||||| ||||||||||||||||||||    
T  5529085 aatggcctattaaggatgttttccgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 5529149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 18817348 - 18817412
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  18817348 aatgacctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 18817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 20100919 - 20100983
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||| ||||    
T  20100919 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccaaaaa 20100983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 20513794 - 20513730
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  ||||||||  |||||||||||||||||||    
T  20513794 aatggcctattaagggtgttttccggaaaataaaaattttacgagagtgcaaatcaaaccgaaaa 20513730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 28192457 - 28192521
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  28192457 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 28192521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 33216548 - 33216612
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  33216548 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 33216612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 8972849 - 8972811
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8972849 ggaaaacacccttaataggccattcaaaaatcaaaattt 8972811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 25890672 - 25890615
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaa 223  Q
    ||||||||||||| |||||||||| |||||||||   ||||||| |||||||||||||    
T  25890672 aatggcctattaagggtgttttctggaaaataaaaaatttacgagggtgcaaatcaaa 25890615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 8224548 - 8224612
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||| | || |||||||| | ||||||||||||||||||    
T  8224548 aatggcctattaagggtgttttccggaaaaaatatattttacgaggatgcaaatcaaaccgaaaa 8224612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 8972826 - 8972890
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| ||||||||| ||||||||||    
T  8972826 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgcaaattaaaccgaaaa 8972890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18755534 - 18755470
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||| |||| |||||||||  ||||||||| | ||||||| ||| ||||||||||||||||    
T  18755534 aatggcctgttaagggtgttttccggaaaataaaatatttacgagggtccaaatcaaaccgaaaa 18755470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 18966840 - 18966904
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| ||||||||||||| ||||||    
T  18966840 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaatcgaaaa 18966904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22422885 - 22422821
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||   |||||||  ||||||||| ||||||||| ||| ||||||||||||||||    
T  22422885 aatggcctattaagattgttttccggaaaataaaatttttacgagggtccaaatcaaaccgaaaa 22422821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 34963513 - 34963577
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  ||||||||  |||||||||||||||||||    
T  34963513 aatggcctattaagggtgtttttcggaaaataaaaattttacgagagtgcaaatcaaaccgaaaa 34963577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 39257255 - 39257191
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||| ||||||    
T  39257255 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaatcgaaaa 39257191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 39615743 - 39615807
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||    ||||||||  |||||||| ||||||||||||||||||||    
T  39615743 aatggcctattaagggtgtttttcgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 39615807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 44354027 - 44353963
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  ||||| || ||||||||||||||| ||||    
T  44354027 aatggcctattaagggtgttttccggaaaataaaaattttatgagggtgcaaatcaaaccaaaaa 44353963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 1591953 - 1591894
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaacc 225  Q
    ||||||||||||| ||||||||   |||||||||  |||||||| |||||||||||||||    
T  1591953 aatggcctattaagggtgtttttcggaaaataaaaattttacgagggtgcaaatcaaacc 1591894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 20025445 - 20025382
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaa 229  Q
    ||||||||||||| | |||||||  |||||||||  || ||||| |||||||||||||||||||    
T  20025445 aatggcctattaaggatgttttccggaaaataaaaattgtacgagggtgcaaatcaaaccgaaa 20025382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 18755511 - 18755549
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  18755511 ggaaaacacccttaacaggccattcaaaaacaaaaattt 18755549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 2077203 - 2077260
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaa 223  Q
    ||||||||||||| |||||||||  |||||||||  |||||| | |||||||||||||    
T  2077203 aatggcctattaagggtgttttccggaaaataaaaattttacaagggtgcaaatcaaa 2077260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 26502466 - 26502507
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||| |||||| ||||| |||||||||||    
T  26502466 ggaaaacacccttaataagccattaaaaaatcaaaatttctt 26502507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 9273660 - 9273596
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   |||| |||| |||||||| | ||||||||||||| ||||    
T  9273660 aatggcctattaagggtgttttccgaaaaaaaaatattttacgaggatgcaaatcaaaccaaaaa 9273596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 25301434 - 25301370
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  ||||||||  ||| |||||||||||||||    
T  25301434 aatggcctattaagggtgttttccgaaaaataaaaattttacgagcgtgaaaatcaaaccgaaaa 25301370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 43209353 - 43209401
Alignment:
Q  182 tgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  43209353 tgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 43209401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 3075 - 3195
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||  ||||||||| |||||||||    
T  3075 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgttttccggaaaataaaatttttacga 3174  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  3175 gggtgcaaatcaaaccgaaaa 3195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 3096 - 3032
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   ||||||||| ||||||||| ||||||||||||||| ||||    
T  3096 aatggcctattaagggtgtttttcggaaaataaaatttttacgagggtgcaaatcaaaccaaaaa 3032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 7e-31; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 41877271 - 41877147
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||| ||||||||||         |||||||||||||||||||  ||||||||| |||||||||| |||||    
T  41877271 ctggaaaacacccttaataggccattcaaaaacaaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccagaaaataaaattttt 41877172  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||||    
T  41877171 acgagggtgcaaatcaaaccgaaaa 41877147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 15984364 - 15984241
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt--ctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||  |||||||||||||||||  |||||||||| |||| |  ||||||||    
T  15984364 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaattttttttctgaaaatggcctattaggggtgttttctggaaattttatttttta 15984265  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  15984264 cgagggtgcaaatcaaaccgaaaa 15984241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 16274571 - 16274693
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| || |||||||||  ||||||||| |||||||    
T  16274571 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctatcaagggtgttttccggaaaataaaatttttac 16274670  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    ||  |||||||||||||| ||||    
T  16274671 gagagtgcaaatcaaaccaaaaa 16274693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 17358187 - 17358065
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  ||||||||| ||||||||||  ||| ||    
T  17358187 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccagaaaataaaaatttcac 17358088  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||| ||||    
T  17358087 gagggtgcaaatcaaaccaaaaa 17358065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 46483724 - 46483846
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||| ||  |||||||||| |||||||||  ||||||    
T  46483724 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctaataggggtgttttctggaaaataaaaattttac 46483823  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |||| |||||||||||||||    
T  46483824 gagggtgtaaatcaaaccgaaaa 46483846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 37101413 - 37101534
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt-tctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||          | ||||||||||||||||  |||||||| |||||||||||  ||||||    
T  37101413 ggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaatatgaaaatggcctattaggggtgttttttagaaaataaaaattttac 37101512  T
Q  208 gatggtgcaaatcaaaccgaaa 229  Q
    ||||||||||||||||||||||    
T  37101513 gatggtgcaaatcaaaccgaaa 37101534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 33582966 - 33582843
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt--tctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||||| |||||||||||||||||||||||||||||||        |  ||||||||||||||||||  || ||||||  ||||||||| ||||||    
T  33582966 ggaaaacaccattaataggccattcaaaaaccaaaatttcttgaaaaaaataatctgaaaatggcctattaggggcgttttccggaaaataaaattttta 33582867  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  33582866 cgagggtgcaaatcaaaccgaaaa 33582843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 43742083 - 43742203
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt-ctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    |||||||| |||||||||||||||||||||||||||||||        || |||||||||||||||||  |||||||||  |||||||||  ||||||||    
T  43742083 aaaacaccattaataggccattcaaaaaccaaaatttcttgaaaaaagtttctgaaaatggcctattaggggtgttttccggaaaataaaaattttacga 43742182  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  43742183 gggtgcaaatcaaaccgaaaa 43742203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 3158565 - 3158447
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgat 210  Q
    |||||||||||| |||| ||||||||||||||||||||||        ||||||||||||||||||| |||||||||  ||||| ||  ||||||||||     
T  3158565 aaaacacccttagtaggtcattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattagaggtgtttttcagaaa-tattttttttacgag 3158467  T
Q  211 ggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||||    
T  3158466 ggtgcaaatcaaaccgaaaa 3158447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 7881518 - 7881637
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  7881518 ggaaaacaaccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 7881617  T
Q  208 gatggtgcaaatcaaaccga 227  Q
    || |||||||||||||||||    
T  7881618 gagggtgcaaatcaaaccga 7881637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 38651968 - 38651853
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||  |||||||||  |||||||||||||||||    
T  38651968 ggaaaacacccttaataggccattcaaaaaccaaaatatcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaattttttac 38651869  T
Q  208 gatggtgcaaatcaaa 223  Q
     | |||||||||||||    
T  38651868 aagggtgcaaatcaaa 38651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 4098175 - 4098297
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||| ||| ||         |||| ||||||||||||||  |||||||||  |||||||||||||||||    
T  4098175 ggaaaacacccttaataggccattcaaaaaccaaatttttttgaaaaaaaattctaaaaatggcctattaggggtgttttccggaaaataaattttttac 4098274  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||| ||||||||||    
T  4098275 gagggtgcaaattaaaccgaaaa 4098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 11666939 - 11666817
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||| |||||||||||||||||||| ||         |||||||||||||||||||  ||||||||| ||||||||||  ||||||    
T  11666939 ggaaaacacccttaatagaccattcaaaaaccaaaatttattgaaaaaaaattctgaaaatggcctattaggggtgttttccagaaaataaaaattttac 11666840  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||| ||||    
T  11666839 gagggtgcaaatcaaaccaaaaa 11666817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 12180032 - 12180154
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||  ||| |||||  |||||||||  ||||||    
T  12180032 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaatctgaaaatggcctattaggggtattttccggaaaataaaaattttac 12180131  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  12180132 gagggtgcaaatcaaaccgaaaa 12180154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 14542712 - 14542834
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt-ctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||| ||||||||||        || ||||||||||||||||| |||||||||||  ||||||||  |||| |    
T  14542712 ggaaaacacccttaataggccattcaaaaacaaaaatttcttgaattttttttctgaaaatggcctattagaggtgttttctgaaaaataaaaattttgc 14542811  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||| ||||||||||||||||    
T  14542812 gagggttcaaatcaaaccgaaaa 14542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 22947550 - 22947428
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||||||||||||||||||||| |||||||| ||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  22947550 ggaaaacacccttaataggccattcaaaaatcaaaattttttgagaaaaaattctgaaaatggcctattaggggtgttttcctgaaaataaaaattttac 22947451  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  22947450 gagggtgcaaatcaaaccgaaaa 22947428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 31079212 - 31079334
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||         || ||||||||||||||||  |||||||||  ||||||||| |||||||    
T  31079212 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattttgaaaatggcctattaggggtgttttccggaaaataaaatttttac 31079311  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |||| |||||||||||||||    
T  31079312 gagggtgaaaatcaaaccgaaaa 31079334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 24438840 - 24438719
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||| |||||||||  ||||||||||||||| ||    
T  24438840 gaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgttttccggaaaataaatttttttcg 24438741  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | |   ||||||||||||||||    
T  24438740 aggacacaaatcaaaccgaaaa 24438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 20033765 - 20033887
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||||||||||||||||||||||||| |||||||| ||          ||||||||||||| |||||  |||||||||| ||||||||| ||||||    
T  20033765 ggaaaacacccttaataggccattcaaaaatcaaaattttttgcaaaaaaaattctgaaaatggcatattag-ggtgttttctggaaaataaaattttta 20033863  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  20033864 cgagggtgcaaatcaaaccgaaaa 20033887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 30631551 - 30631428
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttct--gaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||||||||||||||||||||||||| |||||||||||        || |  |||||||||||||||  ||||||| |  ||||||||| ||||||    
T  30631551 ggaaaacacccttaataggccattcaaaaatcaaaatttcttgaatttttttttttgaaaatggcctattatgggtgtttcccggaaaataaaattttta 30631452  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  30631451 cgagggtgcaaatcaaaccgaaaa 30631428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 18318565 - 18318688
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaat-ttttta 206  Q
    |||||||||||||||||||||||||||||||||| |||||||         |||||||||||||||||||  |||||||||  ||||| ||||  |||||    
T  18318565 ggaaaacacccttaataggccattcaaaaaccaatatttcttgaaatttttttctgaaaatggcctattaggggtgttttccggaaaaaaaataatttta 18318664  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  18318665 cgagggtgcaaatcaaaccgaaaa 18318688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 30441285 - 30441407
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||| |||| |||||||||||||||||||||||||||||||         |||||||||||||||||||  | |||||||  |||||||||  ||||||    
T  30441285 ggaaagcacctttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagggatgttttccggaaaataaaaattttac 30441384  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  30441385 gagggtgcaaatcaaaccgaaaa 30441407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 30538239 - 30538361
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||          | ||||||||||||||||  |||||||||   ||||||||  ||||||    
T  30538239 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaatatgaaaatggcctattaggggtgttttccgaaaaataaaaattttac 30538338  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||| |||||    
T  30538339 gatggtgcaaatcaaactgaaaa 30538361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 41745272 - 41745150
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||| ||||||||| | ||||||||  ||||||    
T  41745272 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctaaaaatggcctattaagggtgttttccaaaaaataaaaattttac 41745173  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    |  ||| ||||||||||| ||||    
T  41745172 gtgggtacaaatcaaaccaaaaa 41745150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 44205828 - 44205706
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||  |||||||| |||||||    
T  44205828 ggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaatattctgaaaatggcctattaaaagtgttttctgaaaaataaaatttttac 44205729  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    ||   | |||||||||| |||||    
T  44205728 gagaatacaaatcaaactgaaaa 44205706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 47668259 - 47668189
Alignment:
Q  160 tctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||  |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  47668259 tctgaaaatggcctattaggggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 47668189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 24932133 - 24932036
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||| ||||||||||||||||||| |||| ||||||    
T  24932133 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatgacctataaaaggtgttttctagaaaaaaaatattttac 24932036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 46134786 - 46134850
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  46134786 aatggcctattaagggtgttttccagaaaataaattttttacgagggtacaaatcaaaccgaaaa 46134850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 37391364 - 37391241
Alignment:
Q  108 tggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt-tctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||||| ||||||||||||||||||| |||||||||||          ||||||||||||||||||  |||||||||   ||||||||  |||||    
T  37391364 tggaaaacacctttaataggccattcaaaaatcaaaatttcttggaaaaaaaatctgaaaatggcctattaggggtgttttccgaaaaataaaaatttta 37391265  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  37391264 cgagggtgcaaatcaaaccgaaaa 37391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 38416079 - 38415958
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    |||||||||||| |||||||||||||||||||||||||||||         |||| ||||||||||||||  |||||||||  |||||||||  ||||||    
T  38416079 ggaaaacaccct-aataggccattcaaaaaccaaaatttcttgaaaaaaaattctaaaaatggcctattaggggtgttttccggaaaataaaaattttac 38415981  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || |||| |||||||||||||||    
T  38415980 gagggtgtaaatcaaaccgaaaa 38415958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 39459527 - 39459407
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||| || |||||||||||||||||||||||||        ||||||||||||| |||||  | |||||||  ||||| ||||  ||||||    
T  39459527 ggaaaacaccctttatcggccattcaaaaaccaaaatttcttaaaaaaaattctgaaaatggcttattagggatgttttc-cgaaaaaaaataatttacg 39459429  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  39459428 agggtgcaaatcaaaccgaaaa 39459407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 3216174 - 3216110
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  3216174 aatggcctattaaaggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 3216110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 14542735 - 14542671
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  14542735 aatggcctattaagggtgttttccgaaaaataaattttttacgagggtgcaaatcaaaccgaaaa 14542671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 33582943 - 33583007
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  33582943 aatggcctattaatggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 33583007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 43742104 - 43742040
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||| ||||||||||||||||||||    
T  43742104 aatggcctattaatggtgttttttggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 43742040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 43989146 - 43989222
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgtttt 187  Q
    ||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||| ||||||||    
T  43989146 aaaacacccttaataggccattcaaaaaccaaaattttttgaaaaaaattctgaaaatggcctattaagggtgtttt 43989222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 46134811 - 46134688
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||| | | |||||| ||||| ||||  |||    
T  46134811 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaacaattctaaaaatggcctattaaggatattttctggaaaa-aaataattt 46134713  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||| ||||| ||||    
T  46134712 acgagggtgcaaattaaaccaaaaa 46134688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 9712579 - 9712500
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttct 189  Q
    |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||||    
T  9712579 gaaaacacacttaataggccattcaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgttttct 9712500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 25677263 - 25677153
Alignment:
Q  121 taataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaat 219  Q
    ||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||   |||||||| ||||||||| |   |||||    
T  25677263 taataggccattcaaaaaccaaaatttcttcaaaaaaaattctgaaaatggcctattaagggtgttttccgaaaaataaaatttttacgaggacacaaat 25677164  T
Q  220 caaaccgaaaa 230  Q
    |||||||||||    
T  25677163 caaaccgaaaa 25677153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 4098198 - 4098134
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  4098198 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 4098134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 15129793 - 15129671
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt---nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||| ||||||||||||||||||||||           |||||||||||||||||||  ||||||||||  ||| |   ||||||||    
T  15129793 aaaacacccttaataggtcattcaaaaaccaaaatttcttgaaatttttttttctgaaaatggcctattaggggtgttttctgaaaattttgttttttac 15129694  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || | ||||||||||||||||||    
T  15129693 gaggatgcaaatcaaaccgaaaa 15129671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18449483 - 18449419
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||| || |||||||||  ||| ||||||||||||||| ||||||||||||||||||||    
T  18449483 aatggcctataaagggtgttttccggaatataaattttttacgagggtgcaaatcaaaccgaaaa 18449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 28311265 - 28311329
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  | ||||||| ||||||||| ||||||||||||||||||||    
T  28311265 aatggcctattaagggtgttttccggtaaataaaatttttacgagggtgcaaatcaaaccgaaaa 28311329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38651945 - 38652009
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   |||||||| ||||||||| ||||||||||||||||||||    
T  38651945 aatggcctattaagggtgttttccgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 38652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 41877246 - 41877310
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||   ||||||| ||||||||||||||||||||    
T  41877246 aatggcctattaagggtgttttccagaaaataaaaaatttacgagggtgcaaatcaaaccgaaaa 41877310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 18024712 - 18024755
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  18024712 ctggaaaacacccttaataggtcattcaaaaaccaaaatttctt 18024755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 25728372 - 25728333
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25728372 aaaacacccttaataggccattcaaaaaccaaaatttctt 25728333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 3216151 - 3216192
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  3216151 ggaaaacacctttaataggccattcaaaaaccaaaatttctt 3216192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 18449460 - 18449501
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  18449460 ggaaaacaccctttataggccattcaaaaaccaaaatttctt 18449501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 7881541 - 7881477
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||  ||||||||| ||||||||| |||||||||||||| |||||    
T  7881541 aatggcctattaaggttgttttccggaaaataaaatttttacgagggtgcaaatcaaactgaaaa 7881477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 12180055 - 12179991
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  12180055 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 12179991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 15984341 - 15984405
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  15984341 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtggaaatcaaaccgaaaa 15984405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 16274594 - 16274530
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||| || ||||||||| ||||||||||||| ||||||    
T  16274594 aatggcctattaagggtgttttccggaaaattaaatttttacgagggtgcaaatcaaatcgaaaa 16274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 17358164 - 17358228
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||| |||||||||||||||    
T  17358164 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgaaaatcaaaccgaaaa 17358228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 22947527 - 22947591
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||||||||||||| |||||    
T  22947527 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaactgaaaa 22947591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 30441308 - 30441244
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||| ||||   |||||||| ||||||||| |||| |||||||||||||||    
T  30441308 aatggcctattaaaggtgctttccgaaaaataaaatttttacgagggtgaaaatcaaaccgaaaa 30441244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 30538262 - 30538199
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||||||||||    
T  30538262 aatggcctattaagggtgttttccggaaaataaaatttttacga-ggtgaaaatcaaaccgaaaa 30538199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30631528 - 30631592
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||   ||||||| ||||||||||||||||||||    
T  30631528 aatggcctattaagggtgttttccggaaaataaaaaatttacgagggtgcaaatcaaaccgaaaa 30631592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 31644060 - 31643996
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| ||||||||   ||||||||||||||||||| ||||||||||||| ||||||    
T  31644060 aatgacctattaagggtgtttttcggaaaataaattttttacgagggtgcaaatcaaatcgaaaa 31643996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 41745249 - 41745313
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  41745249 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 41745313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 43991282 - 43991358
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttc 188  Q
    ||||||||||||||| ||||||||||||||||||||||||        ||||||||| |||||||||| |||||||||    
T  43991282 aaaacacccttaataagccattcaaaaaccaaaatttctt-aaaaaaattctgaaaaaggcctattaagggtgttttc 43991358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 46945088 - 46944967
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnt---tctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||| |||||||||| |||||||||||||||||            |||||||||| |||||||  |||||||||  ||||||||| |||||||    
T  46945088 aaaacaccctttataggccattaaaaaaccaaaatttcttgaaaaataaaaatctgaaaatgtcctattaggggtgttttccggaaaataaaatttttac 46944989  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
     | ||||||||||||||||||||    
T  46944988 -agggtgcaaatcaaaccgaaaa 46944967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 46945067 - 46945131
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||| || ||||||||   ||||||||||||||||||| ||||||||||||| ||||||    
T  46945067 aatggcctataaagggtgtttttcggaaaataaattttttacgagggtgcaaatcaaatcgaaaa 46945131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 25728351 - 25728410
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaacc 225  Q
    ||||||||||||| ||||||||    |||||||||||||||||| |||||||||||||||    
T  25728351 aatggcctattaagggtgtttttcgaaaaataaattttttacgagggtgcaaatcaaacc 25728410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 31644039 - 31644078
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  31644039 aaaacacccttaataggtcattcaaaaaccaaaatttctt 31644078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 39868570 - 39868609
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  39868570 aaaagacccttaataggccattcaaaaaccaaaatttctt 39868609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 3687725 - 3687763
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttct 149  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  3687725 aaaacacccttaataggccattcaaaaaccaaaaattct 3687763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 35077810 - 35077776
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaat 145  Q
    |||||||||||||||||||||||||||||||||||    
T  35077810 aaaacacccttaataggccattcaaaaaccaaaat 35077776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 11469044 - 11469109
Alignment:
Q  165 aaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||| | |||||||  ||||||| |  |||||||| ||||||||||||||||||||    
T  11469044 aaatggcctattaaggatgttttccggaaaatataaattttacgagggtgcaaatcaaaccgaaaa 11469109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 28311288 - 28311247
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  28311288 ggaaaacacccttaataggccattcaaaaacaataatttctt 28311247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 31298673 - 31298609
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||| ||||   |||||||||  ||||||||||||| |||||||||||||||    
T  31298673 aatggcctattaagggtatttttcggaaaataaaaattttacgatggtgtaaatcaaaccgaaaa 31298609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 37101436 - 37101372
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| | |||||||   |||||||| ||||||||| |||||||||||||| |||||    
T  37101436 aatggcctattaaggatgttttccgaaaaataaaatttttacgagggtgcaaatcaaactgaaaa 37101372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 39459504 - 39459568
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||| || || |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  39459504 aatggccgataaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 39459568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 39868591 - 39868527
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||| ||||   |||||||| |||||||||| |||||||||||||| |||||    
T  39868591 aatggcctattaagggtctttttcggaaaataatttttttacgagggtgcaaatcaaacagaaaa 39868527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 46483747 - 46483683
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||| | |||| |||||||||||||||    
T  46483747 aatggcctattaagggtgttttccggaaaataaaaattttacaagggtgaaaatcaaaccgaaaa 46483683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 3687760 - 3687831
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||| ||||  |||||||||  |||||  ||  |||||||| ||||||||||||||||||||    
T  3687760 ttctgaaaatggcccattaggggtgttttccggaaaaataaaattttacgagggtgcaaatcaaaccgaaaa 3687831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 11469068 - 11469029
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttc 148  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  11469068 ggaaaacatccttaataggccatttaaaaaccaaaatttc 11469029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 31298652 - 31298691
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  31298652 aaaatacccttaataggccattgaaaaaccaaaatttctt 31298691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 767845 - 767783
Alignment:
Q  329 gttacaccttaaattgacaaaaacacccttaattccttctctaattttcaattattacccttt 391  Q
    ||||||||  ||||||||| |||||||||||||||||| |  ||||||||| ||||| |||||    
T  767845 gttacaccccaaattgacataaacacccttaattcctttttaaattttcaactattatccttt 767783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 21872213 - 21872251
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  21872213 ggaaaacacccttcgtaggccattcaaaaaccaaaattt 21872251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 37446624 - 37446690
Alignment:
Q  164 aaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||| |||||| |||||||||  |||||||||  ||||||||  ||| |||||||||||||||    
T  37446624 aaaatggcttattaagggtgttttccggaaaataaaaattttacgagagtgtaaatcaaaccgaaaa 37446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 6369185 - 6369213
Alignment:
Q  121 taataggccattcaaaaaccaaaatttct 149  Q
    |||||||||||||||||||||||||||||    
T  6369185 taataggccattcaaaaaccaaaatttct 6369213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 6377650 - 6377678
Alignment:
Q  121 taataggccattcaaaaaccaaaatttct 149  Q
    |||||||||||||||||||||||||||||    
T  6377650 taataggccattcaaaaaccaaaatttct 6377678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 20033788 - 20033724
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||   ||||| |  |||||||||||||||||||    
T  20033788 aatggcctattaagggtgttttccggaaaataaaaaatttacaaaagtgcaaatcaaaccgaaaa 20033724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38416057 - 38416120
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||  |||||||||   ||||||||  |||||||| ||||||||||||||||||||    
T  38416057 aatggcctattag-ggtgttttccgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 38416120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 4407970 - 4408092
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||| |||||||||  ||||||    
T  4407970 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagtggtgttttctggaaaataaaaattttac 4408069  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  4408070 gagggtgcaaatcaaaccgaaaa 4408092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 7850599 - 7850723
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||| |||||||||| ||||||||||  ||||    
T  7850599 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaaaggcctattagaggtgttttccagaaaataaaaatttt 7850698  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||| ||||    
T  7850699 acgagggtgcaaatcaaaccaaaaa 7850723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 26908355 - 26908477
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnntt---ctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||        ||   |||||||||||||||||  |||||||||  |||||||||||||||||    
T  26908355 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaatttttttttctgaaaatggcctattaggggtgttttccggaaaataaattttttac 26908454  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  26908455 gagggtgcaaatcaaaccgaaaa 26908477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 2255466 - 2255587
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  |||||||    
T  2255466 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttacg 2255565  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  2255566 agggtgcaaatcaaaccgaaaa 2255587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 2965674 - 2965796
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  ||||||||   |||||||||  ||||||    
T  2965674 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaataaaaattttac 2965773  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  2965774 gagggtgcaaatcaaaccgaaaa 2965796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 9964455 - 9964577
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||| ||||||||||||| ||         |||||||||||||||||||  ||||||||| ||||||||||  ||||||    
T  9964455 ggaaaacacccttaataggccattctaaaaccaaaatttattgaaaaaaaattctgaaaatggcctattaggggtgttttccagaaaataaaaattttac 9964554  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  9964555 gagggtgcaaatcaaaccgaaaa 9964577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 19591483 - 19591361
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  |||||     
T  19591483 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttat 19591384  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  19591383 gagggtgcaaatcaaaccgaaaa 19591361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 30240748 - 30240626
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||| ||||||||||||||||||||||||||||||||         || ||||||||||||||||  |||||||||  |||||||||||||||||    
T  30240748 ggaaaacacacttaataggccattcaaaaaccaaaatttcttgaaaaaaaattatgaaaatggcctattaggggtgttttccggaaaataaattttttac 30240649  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||| ||||||||    
T  30240648 gagggtgcaaatcataccgaaaa 30240626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 2039399 - 2039520
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    ||||||||  ||||| |    
T  2039399 ggaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaaaattctgaaaatggcctattaaaggtgtttttcgaaaaataaaaattttatg 2039498  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    |   ||||||||||||||||||    
T  2039499 agattgcaaatcaaaccgaaaa 2039520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 25948731 - 25948852
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  |||||||    
T  25948731 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttacg 25948830  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||| ||||||||||||||    
T  25948831 agggtgccaatcaaaccgaaaa 25948852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 16127209 - 16127332
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    |||||||||||||||||||||||| |||||||||||||| ||          |||||||||||||||||||  |||||||||| |||||||||  |||||    
T  16127209 ggaaaacacccttaataggccatttaaaaaccaaaatttttttaaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaaatttta 16127308  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  16127309 cgagggtgcaaatcaaaccgaaaa 16127332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 28038998 - 28039118
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||| ||||||||||||||||||| ||         |||||||||||||||||||  |||||||||  ||||||||| |||||||||    
T  28038998 aaaacacccttaataggtcattcaaaaaccaaaattttttgaaaaaaaattctgaaaatggcctattaggggtgttttcctgaaaataaaatttttacga 28039097  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  28039098 gggtgcaaatcaaaccgaaaa 28039118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 9887835 - 9887714
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||  ||||||||| ||||| |  | ||||||||    
T  9887835 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttaaaaaaaattctgaaaatggcctattaggggtgttttccagaaattttactttttacg 9887736  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | |||| |||||||||| ||||    
T  9887735 agggtgtaaatcaaaccaaaaa 9887714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 32276268 - 32276147
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||  ||||||||   ||||||||| |||||||     
T  32276268 gaaaacacccttattaggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaataaaatttttaca 32276169  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  32276168 agggtgcaaatcaaaccgaaaa 32276147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 9865133 - 9865253
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||| ||||||||||||||||||||||||||||||||         |||||||||||||||| ||  |||||||||| |||||||||  ||||||||    
T  9865133 aaaacactcttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctactaggggtgttttctggaaaataaaaattttacga 9865232  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||| ||||||||||||    
T  9865233 gggtgcaagtcaaaccgaaaa 9865253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 27660476 - 27660599
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgtttt-ctagaaaataaatttttta 206  Q
    |||||||||||||||||||||||||||||||||||| |||||         |||||||||||||||||||  |||||||| |  ||||||||| ||||||    
T  27660476 ggaaaacacccttaataggccattcaaaaaccaaaaattcttgaaagaaaattctgaaaatggcctattaggggtgttttcccggaaaataaaattttta 27660575  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
     || ||||||||||||||||||||    
T  27660576 tgagggtgcaaatcaaaccgaaaa 27660599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 28228704 - 28228826
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttct-agaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||   |||||||   || |||    
T  28228704 ggaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaaaaatctgaaaatggcctattagaggtgttttctgtaaaaataataattatac 28228803  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||| ||||||    
T  28228804 gagggtgcaaatcaaatcgaaaa 28228826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 32276246 - 32276310
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  32276246 aatggcctaataagggtgttttctggaaaataaattttttacgatggtccaaatcaaaccgaaaa 32276310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 34101090 - 34101217
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttc------ttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattt 202  Q
    ||||||||||||||||||||||||||||||||||||||||      ||        |||||||||||||||||||| ||||||||   ||||||||| ||    
T  34101090 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaattttttttttcttctgaaaatggcctattaagggtgtttttcggaaaataaaatt 34101189  T
Q  203 tttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||   ||||||||||||||||    
T  34101190 tttacgatgacacaaatcaaaccgaaaa 34101217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 6176874 - 6176753
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgtttt-ctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||  |||||||| | | |||| |||   ||||||    
T  6176874 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaatctgaaaatggcctattaggggtgttttccaaaaaaaaaaaaaatttacg 6176775  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||| ||||||    
T  6176774 agggtgcaaatcaaatcgaaaa 6176753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 18699101 - 18699222
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||| ||||||||||         |||| ||||||||||||||  |||||||||   |||||| |  ||||||    
T  18699101 ggaaaacacccttaataggccattcaaaaacaaaaatttcttgaaaaaaaattctaaaaatggcctattaggggtgttttccgaaaaatacaaattttac 18699200  T
Q  208 gatggtgcaaatcaaaccgaaa 229  Q
    || |||||||||||||||||||    
T  18699201 gagggtgcaaatcaaaccgaaa 18699222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 34204846 - 34204967
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||        ||||||||||| |||||||  | |||||||   ||||||||   ||||||    
T  34204846 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaattctgaaaatgacctattagggatgttttccgaaaaataaaaaatttacg 34204945  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||| ||||||||||    
T  34204946 agggtgcaaattaaaccgaaaa 34204967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 2255488 - 2255424
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||| |||||    
T  2255488 aatggcctattaagggtgttttctggaaaataaaatttttacgagggtgcaaatcaaactgaaaa 2255424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 6176852 - 6176916
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||||  |||||||| ||||||||| ||||||||||||||||||||    
T  6176852 aatggcctattaagggtgttttctgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 6176916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 19591460 - 19591524
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  19591460 aatggcctattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 19591524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 14597275 - 14597155
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||  | |||||||  |||||  ||  ||||||    
T  14597275 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagggatgttttccggaaaaataa--ttttac 14597178  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  14597177 gagggtgcaaatcaaaccgaaaa 14597155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 14349021 - 14349142
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||| ||||||||||||||||||||||||||||||||||         || ||||||||||||||||   ||||||||   ||||||||  |||||||    
T  14349021 gaaaactcccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattatgaaaatggcctattaggagtgttttccgaaaaataaaaattttacg 14349120  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||| ||||||    
T  14349121 aaggtgcaaatcaaatcgaaaa 14349142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 1414749 - 1414813
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| | ||||||||||||||||||    
T  1414749 aatggcctattaagggtgttttccggaaaataaaatttttacgaggatgcaaatcaaaccgaaaa 1414813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 2965697 - 2965633
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  2965697 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 2965633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 4407993 - 4407929
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  4407993 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 4407929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 7314688 - 7314752
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| || ||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  7314688 aatggcctattaagggagttttccggaaaataaattttttacaagggtgcaaatcaaaccgaaaa 7314752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 9865154 - 9865090
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||  |||||||   ||||||||||||||||||| ||||||||||||||||||||    
T  9865154 aatggcctattaagagtgttttaaggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 9865090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 27660499 - 27660435
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||| | ||||||||||||||||||    
T  27660499 aatggcctattaagggtgttttccggaaaataaaatttttacgaggatgcaaatcaaaccgaaaa 27660435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30240725 - 30240789
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||  ||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  30240725 aatggcctattaagtgtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 30240789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 18771972 - 18771901
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||| |||||||||||  |||||||||| |||||||||  |||||||| ||||||||||||||| ||||    
T  18771972 ttctgaatatggcctattaggggtgttttctggaaaataaaaattttacgagggtgcaaatcaaaccaaaaa 18771901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 1414772 - 1414734
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaattt 147  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1414772 ggaaaacacccttaataggccattcaaaaaccaaaattt 1414734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 2039422 - 2039358
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| |||||||||||||| |||||    
T  2039422 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaactgaaaa 2039358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 7850624 - 7850560
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  |||||| | ||||||| ||||||||||||    
T  7850624 aatggcctattaagggtgttttccagaaaataaaaattttacaagggtgcaagtcaaaccgaaaa 7850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 15502689 - 15502752
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||| ||||||||||||||||  ||||||||| ||||||||| |||||||||||||| |||||    
T  15502689 aatggcttattaaaggtgttttcg-gaaaataaaatttttacgagggtgcaaatcaaactgaaaa 15502752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 21382452 - 21382380
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaa-ttttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||  ||| |||||  ||||||||| |||||||||| ||| ||||||||||||||||    
T  21382452 ttctgaaaatggcctattaggggtattttccggaaaataaaattttttacgagggtacaaatcaaaccgaaaa 21382380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 22043671 - 22043739
Alignment:
Q  162 tgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||  |||||||||  |||||||||  |||||| | ||||||||||||||||||||    
T  22043671 tgaaaatggcctattaggggtgttttccggaaaataaaaattttacaagggtgcaaatcaaaccgaaaa 22043739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 25948753 - 25948689
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| |||| || ||||||||||||    
T  25948753 aatggcctattaagggtgttttctggaaaataaaaattttacgagggtgaaattcaaaccgaaaa 25948689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 26908376 - 26908312
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   ||||||||| ||||||||| ||||||||||||| ||||||    
T  26908376 aatggcctattaagggtgtttttctgaaaataaaatttttacgagggtgcaaatcaaaacgaaaa 26908312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 7314711 - 7314586
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt---nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaata-aattttt 204  Q
    ||||||| |||||||||||||||||||||||| |||||||||            |||||||||||| |||||  ||||||||||| |||| | |||  ||    
T  7314711 ggaaaactcccttaataggccattcaaaaaccgaaatttcttgaaaaaaaaaaatctgaaaatggcatattaggggtgttttctaaaaaaaataataatt 7314612  T
Q  205 tacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||| ||||||||||||||||||||    
T  7314611 tacgagggtgcaaatcaaaccgaaaa 7314586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 9964478 - 9964414
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||| | |||||||||||||| |||||    
T  9964478 aatggcctattaagggtgttttccggaaaataaaaattttacaagggtgcaaatcaaactgaaaa 9964414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 15502711 - 15502588
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaa-ccaaaatttcttnnnnnnnn--ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttta 206  Q
    ||||||||| |||||| |||||||||||| ||||||||||||          |||||||||||||||||||   ||||||||  |||||||||  |||||    
T  15502711 gaaaacacctttaataagccattcaaaaaaccaaaatttcttgaaaaaaaaattctgaaaatggcctattagttgtgttttccggaaaataaaaatttta 15502612  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||| ||| ||||||    
T  15502611 cgagggtgcaaattaaaacgaaaa 15502588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 18699124 - 18699060
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| |||| |||||||||||||||    
T  18699124 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgtaaatcaaaccgaaaa 18699060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 34204869 - 34204805
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||   |||||||||||||||||  ||||||||| ||||||||||    
T  34204869 aatgacctattaagggtgttttccgaaaaataaattttttacgtgggtgcaaattaaaccgaaaa 34204805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 14349043 - 14348985
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaac 224  Q
    ||||||||||||| || |||||| || |||||||  |||||||| ||||||||||||||    
T  14349043 aatggcctattaagggagttttcaaggaaataaaaattttacgagggtgcaaatcaaac 14348985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 147
Target Start/End: Original strand, 21200214 - 21200247
Alignment:
Q  114 acacccttaataggccattcaaaaaccaaaattt 147  Q
    |||||||||||||| |||||||||||||||||||    
T  21200214 acacccttaataggtcattcaaaaaccaaaattt 21200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 9887812 - 9887876
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  |||||||||  ||||| || |||| |||||||||||||||    
T  9887812 aatgacctattaagggtgttttccggaaaataaaaattttatgagggtggaaatcaaaccgaaaa 9887876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 10738881 - 10738818
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||| ||||  |||||||| |||||| |||| ||| |||| ||||||||||||||||||||    
T  10738881 aatggccttttaagagtgttttccagaaaaaaaatattt-acgagggtgcaaatcaaaccgaaaa 10738818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 24294 - 24415
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| ||||||||    
T  24294 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttacg 24393  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  24394 agggtgcaaatcaaaccgaaaa 24415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 12603 - 12713
Alignment:
Q  121 taataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaat 219  Q
    ||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  ||||||||| ||||||||| |||||||||    
T  12603 taataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaatttttacgagggtgcaaat 12702  T
Q  220 caaaccgaaaa 230  Q
    |||||||||||    
T  12703 caaaccgaaaa 12713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 24316 - 24252
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||   ||||||| ||||||||||||||| ||||    
T  24316 aatggcctattaagggtgttttctggaaaataaaaaatttacgagggtgcaaatcaaaccaaaaa 24252  T

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Target: scaffold0035 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 72282 - 72403
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||  ||||||||   ||||||||| ||||||||    
T  72282 ggaaaacacccttaataggccatttaaaaaccaaaatttcttgaaaaaaattctgaaaatggcctattaggggtgtttttcggaaaataaaatttttacg 72381  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  72382 agggtgcaaatcaaaccgaaaa 72403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 72306 - 72241
Alignment:
Q  165 aaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  72306 aaatggcctattaagggtgttttccggaaaataaattttttacgatggtgcaaatcaaaccgaaaa 72241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 6692 - 6816
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaatttttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||  |||||||||  ||||||||| |||||    
T  6692 ctggaaaacacccttaataggccattcaaaaaccaaaattttttgaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaattttt 6791  T
Q  206 acgatggtgcaaatcaaaccgaaaa 230  Q
    |||| ||||||||||||||||||||    
T  6792 acgagggtgcaaatcaaaccgaaaa 6816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6717 - 6653
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||| |||| |||| ||||||||||    
T  6717 aatggcctattaagggtgttttccagaaaataaaaattttacgagggtgaaaattaaaccgaaaa 6653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 403650 - 403536
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||  ||||||||| ||||||||    
T  403650 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaagggtgttttccggaaaataaaatttttacg 403551  T
Q  209 atggtgcaaatcaaa 223  Q
    | |||||||||||||    
T  403550 agggtgcaaatcaaa 403536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 403628 - 403692
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  403628 aatggcctattaagggtgttttctggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 403692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 4063 - 4184
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||| ||||||||||||||||| |||||||||||        |||||||||||||||| ||| ||||||||| ||||||||||   ||||||    
T  4063 ggaaaacaccctcaataggccattcaaaaatcaaaatttcttgaaaaaaattctgaaaatggcctactaagggtgttttccagaaaataaaaaatttacg 4162  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  4163 agggtgcaaatcaaaccgaaaa 4184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 4086 - 4022
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||| | |||||||||  | ||||||| ||||||||| ||||||||||||||||||||    
T  4086 aatggcctattgagggtgttttccggcaaataaaatttttacgagggtgcaaatcaaaccgaaaa 4022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 125498 - 125377
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||| ||  |||||||||  |||| |  ||||||||||    
T  125498 ggaaaacacccttaataggccattcaaaaaccaaaatttcatgaaaaaaattctgaaaatggcctactaggggtgttttccggaaattttattttttacg 125399  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||||||||||||||||    
T  125398 agggtgcaaatcaaaccgaaaa 125377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 125475 - 125539
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   |||||||| ||||||||| ||||||||||||||||||||    
T  125475 aatggcctattaagggtgttttccgaaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 125539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 2995 - 3117
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||  |||||||||  |||||||||  ||||||    
T  2995 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaatttttttctgaaaatggcctattaggggtgttttccggaaaataaaaattttac 3094  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||| |||| |||||    
T  3095 gagggtgcaaattaaactgaaaa 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 3018 - 2954
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  ||||| || |||| |||||||||||||||    
T  3018 aatggcctattaagggtgttttccggaaaataaaaattttatgagggtgaaaatcaaaccgaaaa 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 6788 - 6909
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||||||||||||| |||||||||||||||| |||||         |||||||||||||||||||  |||||||||| ||||||||| ||||||||    
T  6788 gaaaacacccttaataggtcattcaaaaaccaaaaattcttgaaaaaaaattctgaaaatggcctattaggggtgttttctggaaaataaaatttttacg 6887  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    | ||||||| |||||| |||||    
T  6888 agggtgcaattcaaacagaaaa 6909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6810 - 6746
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  6810 aatgacctattaagggtgttttctggaaaataaattttttacgagggtgcaaatcaaaccgaaaa 6746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 15470 - 15590
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacga 209  Q
    ||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||  |||||||||  |||||||||  ||||| ||    
T  15470 aaaacacccttaataggccattcaaaaaccaaaatatcttaaaaaaaaattctgaaaatggcctattaggggtgttttccggaaaataaaaattttatga 15569  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     ||||||||||||||||||||    
T  15570 gggtgcaaatcaaaccgaaaa 15590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 15491 - 15427
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||   |||||||||  |||||||| ||||||||||||||||||||    
T  15491 aatggcctattaagggtgtttttcggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 15427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 4428 - 4305
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaat-aaatttttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| |||||  |||||||||  |||||| |||  |||||    
T  4428 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcttattaggggtgttttccggaaaataaaaaatttta 4329  T
Q  207 cgatggtgcaaatcaaaccgaaaa 230  Q
    ||| ||||||||||||||||||||    
T  4328 cgagggtgcaaatcaaaccgaaaa 4305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 4405 - 4469
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||   ||||||| ||||||||||||||||||||    
T  4405 aatggcctattaagggtgttttccggaaaataaaaaatttacgagggtgcaaatcaaaccgaaaa 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 29202 - 29324
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttct-agaaaataaattttttac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||   |||||||   || |||    
T  29202 ggaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaaaaatctgaaaatggcctattagaggtgttttctgtaaaaataataattatac 29301  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||| ||||||    
T  29302 gagggtgcaaatcaaatcgaaaa 29324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 3495 - 3424
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||||  |||||||||  ||||||||| |||||||| |||||||||||||||||||||    
T  3495 ttctgaaaatggcctattaggggtgttttccggaaaataaaatttttacgttggtgcaaatcaaaccgaaaa 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 57572 - 57451
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-nnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaattttttac 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||         ||||||||||||||| |||  |||||||||   ||||||||  ||||||    
T  57572 ggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcct-ttaggggtgttttccgaaaaataaaaattttac 57474  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  57473 gagggtgcaaatcaaaccgaaaa 57451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 57549 - 57613
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  57549 aatgacctattaagggtgttttccggaaaataaaatttttacgagggtgcaaatcaaaccgaaaa 57613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 62245 - 62309
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  62245 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 62309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 62268 - 62228
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  62268 ggaaaacacccttaataggccattc-aaaaccaaaatttctt 62228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 92850 - 92807
Alignment:
Q  107 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  92850 ctggaaaacacccttaataggccattcaaaaaccaaaatttctt 92807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 92825 - 92889
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||| |||||||||||||| |||||    
T  92825 aatggcctattaagggtgttttccagaaaataaaaattttacgagggtgcaaatcaaactgaaaa 92889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 24867 - 24989
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttct-tnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaaaataaat-tttttac 207  Q
    ||||| ||||||||||||||||||||||||||||||||||          |||| ||||||||||||||  |||||||||| ||||| ||||   |||||    
T  24867 gaaaatacccttaataggccattcaaaaaccaaaatttctcgaaaaaaaattctaaaaatggcctattaggggtgttttctggaaaaaaaataaatttac 24966  T
Q  208 gatggtgcaaatcaaaccgaaaa 230  Q
    || ||||||||||||||||||||    
T  24967 gagggtgcaaatcaaaccgaaaa 24989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 7518 - 7397
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnn-ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacg 208  Q
    |||||||  ||||||||| ||||||||||||||||||||||         ||||||||||||||||||| ||||||||||   ||||||||  ||||| |    
T  7518 gaaaacattcttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattagaggtgttttccgaaaaataaaaattttagg 7419  T
Q  209 atggtgcaaatcaaaccgaaaa 230  Q
    |  |||||||||||||| ||||    
T  7418 agagtgcaaatcaaaccaaaaa 7397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 7512 - 7560
Alignment:
Q  182 tgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||  ||||||||  |||||||| ||||||||||||||||||||    
T  7512 tgttttctgaaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 7560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 1354 - 1395
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1354 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 1395  T

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Target: scaffold0744 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 1405 - 1446
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1405 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 1446  T

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Target: scaffold0744; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 1428 - 1364
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  1428 aatggcctattaagggtgttttccggaaaataaaaattttacgagggtgcaaatcaaaccgaaaa 1364  T

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Target: scaffold0744; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 1457 - 1495
Alignment:
Q  192 aaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1457 aaaataaattttttacgagggtgcaaatcaaaccgaaaa 1495  T

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Target: scaffold0148 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 24612 - 24571
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24612 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 24571  T

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Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 24589 - 24653
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||   ||||||||  |||||||| |||| | |||||||||||||    
T  24589 aatggcctattaagggtgttttccgaaaaataaaaattttacgagggtgaatatcaaaccgaaaa 24653  T

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Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 47173 - 47213
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  47173 gaaaacacccttaataggccattcaaaaaccaaaatttctt 47213  T

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Target: scaffold0043; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 47195 - 47131
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| |||||||||| |||||||||  |||||  | || ||||||||||| |||||    
T  47195 aatggcctattaagggtgttttctggaaaataaaaattttatcagggcgcaaatcaaactgaaaa 47131  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 142388 - 142317
Alignment:
Q  159 ttctgaaaatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||||||||   |||||||||| |||||||||  |||||||| ||||||||||||||| ||||    
T  142388 ttctgaaaatggcctattgggggtgttttctggaaaataaaaattttacgagggtgcaaatcaaaccaaaaa 142317  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 43884 - 43805
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttc 188  Q
    ||||||||||||||||| |||||| |||||||||||||| ||        |||||||||||||||||||| |||||||||    
T  43884 ggaaaacacccttaataagccattaaaaaaccaaaattttttgaaaaaaattctgaaaatggcctattaagggtgttttc 43805  T

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Target: scaffold0559 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 3323 - 3258
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaat-aaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||| |||||||||||||| |||||    
T  3323 aatggcctattaagggtgttttctagaaaataaaaaattttacgagggtgcaaatcaaactgaaaa 3258  T

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Target: scaffold0559; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 3301 - 3341
Alignment:
Q  110 gaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  3301 gaaaacacccttaataggccattcaaaagccaaaatttctt 3341  T

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Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 5262 - 5303
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  5262 ggaaaacacccttaatagggcattcaaaaaccaaaatttctt 5303  T

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Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 5285 - 5221
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||| |||||||| |||||||||  |||||||||   ||||||| ||||||||||||| ||||||    
T  5285 aatgccctattaagggtgttttccggaaaataaaaaatttacgagggtgcaaatcaaatcgaaaa 5221  T

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Target: scaffold0809 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 1908 - 2028
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttcttnnnnnnnnttctgaaaatggcctattaaaggtgttttctagaa-aataaattttttacga 209  Q
    ||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||| ||  ||||||||| |||| | |   ||||||||||    
T  1908 aaaacacccttaatatgccattcaaaaaccaaaatttcttgaaaaaaaatctgaaaatggcctaataggggtgttttccagaatatttttttttttacga 2007  T
Q  210 tggtgcaaatcaaaccgaaaa 230  Q
     |||| |||||||||| ||||    
T  2008 gggtgaaaatcaaacccaaaa 2028  T

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Target: scaffold0809; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 1929 - 1865
Alignment:
Q  166 aatggcctattaaaggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||| |||||| ||||||||   |||||||| |||||||| | ||||||||||||| ||||||    
T  1929 aatggcatattaagggtgtttttcggaaaataatttttttacaagggtgcaaatcaaatcgaaaa 1865  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 24007 - 23957
Alignment:
Q  180 ggtgttttctagaaaataaattttttacgatggtgcaaatcaaaccgaaaa 230  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||| ||||    
T  24007 ggtgttttccggaaaataaattttttacgagggtgcaaatcaaaccaaaaa 23957  T

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Target: scaffold0473 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 1720 - 1761
Alignment:
Q  109 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  1720 ggaaaacactcttaacaggccattcaaaaaccaaaatttctt 1761  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 9758 - 9719
Alignment:
Q  111 aaaacacccttaataggccattcaaaaaccaaaatttctt 150  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  9758 aaaacacccataataggctattcaaaaaccaaaatttctt 9719  T

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Target: scaffold1822 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 892 - 860
Alignment:
Q  117 cccttaataggccattcaaaaaccaaaatttct 149  Q
    ||||||||||| |||||||||||||||||||||    
T  892 cccttaataggtcattcaaaaaccaaaatttct 860  T

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