View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17176_low_12 (Length: 392)

Name: NF17176_low_12
Description: NF17176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17176_low_12
NF17176_low_12
[»] chr7 (14 HSPs)
chr7 (11-131)||(12243994-12244110)
chr7 (337-375)||(12244286-12244324)
chr7 (221-282)||(12244170-12244231)
chr7 (194-226)||(12006541-12006573)
chr7 (194-226)||(20459036-20459068)
chr7 (194-226)||(23383846-23383878)
chr7 (194-226)||(23704662-23704694)
chr7 (194-226)||(24195218-24195250)
chr7 (194-226)||(25772364-25772396)
chr7 (194-226)||(28218178-28218210)
chr7 (194-226)||(28218509-28218541)
chr7 (194-226)||(38879723-38879755)
chr7 (194-226)||(38880067-38880099)
chr7 (194-226)||(48672277-48672309)
[»] chr8 (10 HSPs)
chr8 (194-226)||(26137030-26137062)
chr8 (194-226)||(5554869-5554901)
chr8 (194-226)||(7689524-7689556)
chr8 (194-226)||(7689869-7689901)
chr8 (194-226)||(10108370-10108402)
chr8 (194-226)||(10171489-10171521)
chr8 (194-226)||(14820295-14820327)
chr8 (194-226)||(18044173-18044205)
chr8 (194-226)||(30789853-30789885)
chr8 (194-226)||(43851665-43851697)
[»] chr3 (13 HSPs)
chr3 (194-226)||(14171587-14171619)
chr3 (194-226)||(5800605-5800637)
chr3 (194-226)||(9266975-9267007)
chr3 (194-226)||(14171932-14171964)
chr3 (194-226)||(14262382-14262414)
chr3 (194-226)||(16721991-16722023)
chr3 (194-226)||(16722337-16722369)
chr3 (194-226)||(20853695-20853727)
chr3 (194-226)||(21632901-21632933)
chr3 (194-226)||(30500386-30500418)
chr3 (194-226)||(45969915-45969947)
chr3 (194-226)||(45970262-45970294)
chr3 (194-226)||(49986527-49986559)
[»] scaffold0361 (1 HSPs)
scaffold0361 (194-226)||(4908-4940)
[»] scaffold0141 (1 HSPs)
scaffold0141 (194-226)||(8325-8357)
[»] chr6 (5 HSPs)
chr6 (194-226)||(9481182-9481214)
chr6 (194-226)||(18500675-18500707)
chr6 (194-226)||(24731935-24731967)
chr6 (194-226)||(24732283-24732315)
chr6 (194-226)||(30617967-30617999)
[»] chr5 (4 HSPs)
chr5 (194-226)||(14143902-14143934)
chr5 (194-226)||(14411697-14411729)
chr5 (194-226)||(23979247-23979279)
chr5 (194-226)||(24837515-24837547)
[»] chr4 (2 HSPs)
chr4 (194-226)||(31218327-31218359)
chr4 (194-226)||(41946965-41946997)
[»] chr2 (4 HSPs)
chr2 (194-226)||(17850587-17850619)
chr2 (194-226)||(17850932-17850964)
chr2 (194-226)||(23855040-23855072)
chr2 (194-226)||(26236440-26236472)
[»] chr1 (7 HSPs)
chr1 (194-226)||(4906962-4906994)
chr1 (194-226)||(18462286-18462318)
chr1 (194-226)||(29696565-29696597)
chr1 (194-226)||(30299232-30299264)
chr1 (194-226)||(33628690-33628722)
chr1 (194-226)||(39711418-39711450)
chr1 (194-226)||(52058354-52058386)


Alignment Details
Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 12243994 - 12244110
Alignment:
Q  11 tgagatgaacaaaataacgtaaatataagaatgatgattatactgagaggaaaatagtcaaatataaacattataaggaagggnnnnnnnnccctaataa 110  Q
    |||||||||||||||||||||||||||||||| ||   ||||||||||| |||||||||||||||||||||||||||||||||        |||||||||    
T  12243994 tgagatgaacaaaataacgtaaatataagaataat---tatactgagagaaaaatagtcaaatataaacattataaggaaggg-aaaaaaaccctaataa 12244089  T
Q  111 gtaaaatagttgaatagtgtt 131  Q
    |||||||||||||||||||||    
T  12244090 gtaaaatagttgaatagtgtt 12244110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 12244286 - 12244324
Alignment:
Q  337 gttgttccatgaaaatgtaggtatttaacaaaatgaatt 375  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12244286 gttgttccatgaaaatgtaggtatttaacaaaatgaatt 12244324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 12244170 - 12244231
Alignment:
Q  221 atattacaacatgaataaaacacgtnnnnnnnntgtgagaataatataagttgttagttacc 282  Q
    |||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  12244170 atattacaacatgaataaaacacgtaaaaaaaatgtgagaataatataagttgttagttacc 12244231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 12006541 - 12006573
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatatta 12006573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 20459068 - 20459036
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatatta 20459036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 23383878 - 23383846
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatatta 23383846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 23704662 - 23704694
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatatta 23704694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 24195250 - 24195218
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatatta 24195218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 25772364 - 25772396
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatatta 25772396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 28218178 - 28218210
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatatta 28218210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 28218541 - 28218509
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatatta 28218509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 38879723 - 38879755
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatatta 38879755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 38880099 - 38880067
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatatta 38880067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 48672277 - 48672309
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatatta 48672309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 26137062 - 26137030
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    |||||||||||||||||||||||||||||||||    
T  26137062 gggtaaataccacttttcgtccctgtaatatta 26137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 5554869 - 5554901
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  5554869 gggtaaatacctcttttcgtccctgtaatatta 5554901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 7689524 - 7689556
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  7689524 gggtaaatacctcttttcgtccctgtaatatta 7689556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 7689901 - 7689869
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatatta 7689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 10108370 - 10108402
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatatta 10108402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 10171521 - 10171489
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatatta 10171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 14820295 - 14820327
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatatta 14820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 18044205 - 18044173
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatatta 18044173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 30789885 - 30789853
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatatta 30789853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 43851665 - 43851697
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatatta 43851697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 14171587 - 14171619
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    |||||||||||||||||||||||||||||||||    
T  14171587 gggtaaataccacttttcgtccctgtaatatta 14171619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 5800605 - 5800637
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatatta 5800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 9266975 - 9267007
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatatta 9267007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 14171964 - 14171932
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatatta 14171932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 14262414 - 14262382
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  14262414 gggtaaatacctcttttcgtccctgtaatatta 14262382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 16721991 - 16722023
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatatta 16722023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 16722369 - 16722337
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatatta 16722337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 20853695 - 20853727
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatatta 20853727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 21632901 - 21632933
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  21632901 gggtaaatacctcttttcgtccctgtaatatta 21632933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 30500418 - 30500386
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  30500418 gggtaaatacctcttttcgtccctgtaatatta 30500386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 45969915 - 45969947
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatatta 45969947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 45970294 - 45970262
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatatta 45970262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 49986527 - 49986559
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  49986527 gggtaaatacctcttttcgtccctgtaatatta 49986559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 4940 - 4908
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatatta 4908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 8325 - 8357
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  8325 gggtaaatacctcttttcgtccctgtaatatta 8357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000005; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 9481182 - 9481214
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatatta 9481214  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 18500707 - 18500675
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatatta 18500675  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 24731935 - 24731967
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  24731935 gggtaaatacctcttttcgtccctgtaatatta 24731967  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 24732315 - 24732283
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatatta 24732283  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 30617967 - 30617999
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  30617967 gggtaaatacctcttttcgtccctgtaatatta 30617999  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000005; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 14143902 - 14143934
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  14143902 gggtaaatacctcttttcgtccctgtaatatta 14143934  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 14411697 - 14411729
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  14411697 gggtaaatacctcttttcgtccctgtaatatta 14411729  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 23979279 - 23979247
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatatta 23979247  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 24837547 - 24837515
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatatta 24837515  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 31218359 - 31218327
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatatta 31218327  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 41946965 - 41946997
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  41946965 gggtaaatacctcttttcgtccctgtaatatta 41946997  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000005; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 17850587 - 17850619
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatatta 17850619  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 17850964 - 17850932
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatatta 17850932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 23855072 - 23855040
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatatta 23855040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 26236472 - 26236440
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatatta 26236440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000005; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 4906962 - 4906994
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatatta 4906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 18462286 - 18462318
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  18462286 gggtaaatacctcttttcgtccctgtaatatta 18462318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 29696565 - 29696597
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatatta 29696597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 30299232 - 30299264
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatatta 30299264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 33628690 - 33628722
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  33628690 gggtaaatacctcttttcgtccctgtaatatta 33628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 39711450 - 39711418
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatatta 39711418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 52058386 - 52058354
Alignment:
Q  194 gggtaaataccacttttcgtccctgtaatatta 226  Q
    ||||||||||| |||||||||||||||||||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatatta 52058354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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