View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17176_low_22 (Length: 254)

Name: NF17176_low_22
Description: NF17176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17176_low_22
NF17176_low_22
[»] chr8 (33 HSPs)
chr8 (31-82)||(5554863-5554914)
chr8 (31-73)||(10108373-10108415)
chr8 (31-73)||(14820298-14820340)
chr8 (31-73)||(18044160-18044202)
chr8 (31-73)||(43851668-43851710)
chr8 (31-80)||(10171476-10171525)
chr8 (37-80)||(7689520-7689563)
chr8 (34-73)||(7689859-7689898)
chr8 (31-80)||(35367406-35367455)
chr8 (31-88)||(43481648-43481705)
chr8 (31-71)||(10108703-10108743)
chr8 (31-71)||(14820627-14820667)
chr8 (31-71)||(21147941-21147981)
chr8 (34-89)||(42605742-42605797)
chr8 (31-73)||(21148269-21148311)
chr8 (31-73)||(30789840-30789882)
chr8 (34-68)||(42112993-42113027)
chr8 (1-30)||(5555155-5555184)
chr8 (31-68)||(5555202-5555239)
chr8 (1-30)||(10108433-10108462)
chr8 (1-30)||(10108656-10108685)
chr8 (1-30)||(14767570-14767599)
chr8 (1-30)||(14820357-14820386)
chr8 (1-30)||(14820580-14820609)
chr8 (37-78)||(17622888-17622929)
chr8 (1-30)||(21148000-21148029)
chr8 (1-30)||(26532846-26532875)
chr8 (1-30)||(30789793-30789822)
chr8 (1-30)||(43851727-43851756)
chr8 (31-83)||(1949645-1949697)
chr8 (2-30)||(2583383-2583411)
chr8 (31-71)||(20877078-20877118)
chr8 (35-71)||(26136690-26136726)
[»] chr7 (40 HSPs)
chr7 (77-144)||(12244164-12244231)
chr7 (31-73)||(20419539-20419581)
chr7 (34-81)||(12006536-12006583)
chr7 (31-78)||(28218496-28218543)
chr7 (199-237)||(12244286-12244324)
chr7 (31-73)||(23704665-23704707)
chr7 (31-73)||(28218181-28218223)
chr7 (31-79)||(23704993-23705041)
chr7 (31-78)||(20459023-20459070)
chr7 (31-78)||(20963826-20963873)
chr7 (35-73)||(38879726-38879764)
chr7 (31-73)||(38880054-38880096)
chr7 (31-73)||(41600291-41600333)
chr7 (36-73)||(24195210-24195247)
chr7 (37-73)||(25772367-25772403)
chr7 (35-79)||(25772668-25772712)
chr7 (31-79)||(48672274-48672322)
chr7 (31-86)||(20458682-20458737)
chr7 (31-78)||(48672612-48672659)
chr7 (31-73)||(7657972-7658014)
chr7 (31-73)||(7658298-7658340)
chr7 (31-73)||(16995203-16995245)
chr7 (31-73)||(20419870-20419912)
chr7 (36-78)||(23383838-23383880)
chr7 (31-73)||(41599961-41600003)
chr7 (1-30)||(12006826-12006855)
chr7 (34-79)||(12006876-12006921)
chr7 (1-30)||(20419599-20419628)
chr7 (1-30)||(20419822-20419851)
chr7 (1-30)||(23383786-23383815)
chr7 (1-30)||(23704947-23704976)
chr7 (1-30)||(24194926-24194955)
chr7 (1-30)||(25772617-25772646)
chr7 (1-30)||(28218242-28218271)
chr7 (1-30)||(28218449-28218478)
chr7 (1-30)||(38879787-38879816)
chr7 (1-30)||(41600244-41600273)
chr7 (1-30)||(48648324-48648353)
chr7 (31-71)||(31852163-31852203)
chr7 (37-73)||(33162875-33162911)
[»] chr5 (32 HSPs)
chr5 (31-73)||(31799643-31799685)
chr5 (31-80)||(14411693-14411742)
chr5 (31-72)||(31799972-31800013)
chr5 (31-83)||(23979234-23979286)
chr5 (31-73)||(14143905-14143947)
chr5 (31-80)||(7126250-7126299)
chr5 (31-83)||(17762615-17762667)
chr5 (34-73)||(18336470-18336509)
chr5 (31-78)||(24651032-24651079)
chr5 (31-78)||(24837167-24837214)
chr5 (31-73)||(17762286-17762328)
chr5 (35-73)||(24837506-24837544)
chr5 (31-73)||(41001685-41001727)
chr5 (31-88)||(14411998-14412055)
chr5 (31-87)||(6817112-6817168)
chr5 (31-79)||(24074300-24074348)
chr5 (31-73)||(993753-993795)
chr5 (31-73)||(4919322-4919364)
chr5 (31-73)||(18336789-18336830)
chr5 (31-73)||(24650705-24650747)
chr5 (1-30)||(4919053-4919082)
chr5 (34-71)||(7125923-7125960)
chr5 (1-30)||(7126203-7126232)
chr5 (1-30)||(14143964-14143993)
chr5 (1-30)||(14144187-14144216)
chr5 (1-30)||(18336531-18336560)
chr5 (1-30)||(18336742-18336771)
chr5 (1-30)||(23979187-23979216)
chr5 (1-30)||(24837455-24837484)
chr5 (1-30)||(31799703-31799732)
chr5 (31-71)||(27159287-27159327)
chr5 (35-71)||(29445142-29445178)
[»] chr3 (54 HSPs)
chr3 (31-81)||(14171919-14171969)
chr3 (31-73)||(9266978-9267020)
chr3 (31-73)||(14262369-14262411)
chr3 (31-73)||(16721994-16722036)
chr3 (31-73)||(19113098-19113140)
chr3 (31-81)||(35995673-35995723)
chr3 (31-80)||(49986523-49986572)
chr3 (31-71)||(5800937-5800977)
chr3 (37-81)||(16722330-16722374)
chr3 (34-81)||(9267310-9267357)
chr3 (31-78)||(19112762-19112809)
chr3 (31-73)||(19720336-19720378)
chr3 (31-73)||(20853698-20853740)
chr3 (31-73)||(27946198-27946240)
chr3 (35-73)||(30500377-30500415)
chr3 (31-81)||(33372401-33372451)
chr3 (31-81)||(38283545-38283595)
chr3 (31-73)||(45969918-45969960)
chr3 (31-76)||(27946109-27946154)
chr3 (31-71)||(14162203-14162243)
chr3 (31-71)||(14262041-14262081)
chr3 (37-73)||(21632904-21632940)
chr3 (34-73)||(14171590-14171629)
chr3 (31-78)||(17649342-17649389)
chr3 (34-73)||(35996011-35996050)
chr3 (31-78)||(49986861-49986908)
chr3 (31-73)||(5800608-5800650)
chr3 (35-73)||(14161874-14161912)
chr3 (36-82)||(17465361-17465407)
chr3 (31-81)||(20854028-20854078)
chr3 (37-83)||(21633235-21633281)
chr3 (31-73)||(45970249-45970291)
chr3 (1-30)||(9267038-9267067)
chr3 (1-30)||(14171649-14171678)
chr3 (1-30)||(14262322-14262351)
chr3 (1-30)||(15328746-15328775)
chr3 (1-30)||(16722277-16722306)
chr3 (1-30)||(17649296-17649325)
chr3 (1-30)||(19720396-19720425)
chr3 (1-30)||(20853982-20854011)
chr3 (1-30)||(21633182-21633211)
chr3 (1-30)||(33372469-33372498)
chr3 (1-30)||(33372690-33372719)
chr3 (37-78)||(33372743-33372784)
chr3 (31-80)||(43572385-43572434)
chr3 (1-30)||(45003559-45003588)
chr3 (1-30)||(45969978-45970007)
chr3 (1-30)||(49986591-49986620)
chr3 (31-71)||(3424779-3424819)
chr3 (31-71)||(3425981-3426021)
chr3 (2-30)||(14171873-14171901)
chr3 (37-73)||(17465706-17465742)
chr3 (31-71)||(30500048-30500088)
chr3 (31-87)||(43572723-43572779)
[»] chr1 (32 HSPs)
chr1 (34-80)||(17606300-17606346)
chr1 (31-73)||(18462289-18462331)
chr1 (31-80)||(33628686-33628735)
chr1 (31-71)||(17606639-17606679)
chr1 (31-83)||(29696558-29696610)
chr1 (31-73)||(39711405-39711447)
chr1 (36-73)||(8293146-8293183)
chr1 (31-71)||(27039643-27039683)
chr1 (31-71)||(33629023-33629063)
chr1 (37-73)||(39826053-39826089)
chr1 (31-71)||(43400758-43400798)
chr1 (37-73)||(52058347-52058383)
chr1 (31-78)||(20995696-20995743)
chr1 (36-82)||(4906956-4907002)
chr1 (31-73)||(18342350-18342392)
chr1 (35-73)||(24467632-24467670)
chr1 (39-73)||(30299235-30299269)
chr1 (31-73)||(39826379-39826421)
chr1 (31-81)||(48072294-48072344)
chr1 (31-73)||(52058014-52058056)
chr1 (1-30)||(4907248-4907277)
chr1 (1-30)||(8293093-8293122)
chr1 (1-30)||(18462348-18462377)
chr1 (31-72)||(18462617-18462658)
chr1 (1-30)||(24467691-24467720)
chr1 (1-30)||(24467913-24467942)
chr1 (1-30)||(30299294-30299323)
chr1 (1-30)||(39826113-39826142)
chr1 (1-30)||(39826332-39826361)
chr1 (1-30)||(48072024-48072053)
chr1 (31-71)||(42510348-42510388)
chr1 (31-71)||(43539680-43539720)
[»] chr6 (17 HSPs)
chr6 (31-88)||(24731923-24731980)
chr6 (31-86)||(18500305-18500360)
chr6 (31-73)||(9481185-9481227)
chr6 (34-75)||(26385610-26385651)
chr6 (31-78)||(18500662-18500709)
chr6 (31-81)||(2299646-2299696)
chr6 (35-73)||(24732274-24732312)
chr6 (31-73)||(32017836-32017878)
chr6 (31-72)||(10321737-10321778)
chr6 (31-73)||(26385281-26385323)
chr6 (31-77)||(30458899-30458945)
chr6 (31-65)||(33714494-33714528)
chr6 (1-30)||(9154943-9154972)
chr6 (1-30)||(18500377-18500406)
chr6 (1-30)||(19284192-19284221)
chr6 (36-73)||(30617970-30618007)
chr6 (1-30)||(32017790-32017819)
[»] chr4 (51 HSPs)
chr4 (31-76)||(3018011-3018056)
chr4 (31-88)||(31218314-31218371)
chr4 (31-79)||(7819012-7819060)
chr4 (31-83)||(9397031-9397083)
chr4 (31-79)||(38574301-38574349)
chr4 (31-71)||(48580199-48580239)
chr4 (37-76)||(9396699-9396738)
chr4 (31-86)||(46046757-46046811)
chr4 (31-73)||(9516613-9516655)
chr4 (31-73)||(41946968-41947010)
chr4 (31-73)||(48259826-48259868)
chr4 (34-79)||(3273618-3273663)
chr4 (31-68)||(15640724-15640761)
chr4 (31-80)||(31943946-31943994)
chr4 (37-73)||(12904750-12904786)
chr4 (35-71)||(18667627-18667663)
chr4 (34-78)||(46046428-46046472)
chr4 (31-73)||(9516943-9516985)
chr4 (31-73)||(9618983-9619025)
chr4 (31-73)||(9619312-9619354)
chr4 (31-73)||(15641049-15641091)
chr4 (35-73)||(26252574-26252612)
chr4 (35-73)||(31082188-31082226)
chr4 (31-73)||(35376166-35376208)
chr4 (35-77)||(35376464-35376506)
chr4 (31-73)||(37013039-37013081)
chr4 (31-73)||(41947187-41947229)
chr4 (37-71)||(46935178-46935212)
chr4 (1-30)||(3018075-3018104)
chr4 (1-30)||(7819077-7819106)
chr4 (1-30)||(9396985-9397014)
chr4 (1-30)||(9516896-9516925)
chr4 (1-30)||(9619043-9619072)
chr4 (37-78)||(13132278-13132319)
chr4 (1-30)||(15640778-15640807)
chr4 (1-30)||(26252523-26252552)
chr4 (1-30)||(31090124-31090153)
chr4 (48-85)||(31218255-31218292)
chr4 (1-30)||(31944013-31944042)
chr4 (36-73)||(34063985-34064022)
chr4 (1-30)||(37012770-37012799)
chr4 (1-30)||(38574031-38574060)
chr4 (1-30)||(38574254-38574283)
chr4 (1-30)||(46046710-46046739)
chr4 (1-30)||(48260037-48260066)
chr4 (31-71)||(4355887-4355927)
chr4 (31-71)||(4356213-4356253)
chr4 (77-105)||(5099335-5099363)
chr4 (37-73)||(31090400-31090436)
chr4 (37-73)||(48260089-48260125)
chr4 (35-71)||(50462733-50462769)
[»] scaffold0361 (2 HSPs)
scaffold0361 (31-82)||(4895-4946)
scaffold0361 (34-73)||(4565-4604)
[»] scaffold0185 (1 HSPs)
scaffold0185 (31-81)||(3864-3914)
[»] scaffold0141 (1 HSPs)
scaffold0141 (31-81)||(8320-8370)
[»] chr2 (30 HSPs)
chr2 (31-73)||(23855027-23855069)
chr2 (31-76)||(13254769-13254814)
chr2 (34-73)||(17850590-17850629)
chr2 (31-65)||(17463103-17463137)
chr2 (31-73)||(17463424-17463466)
chr2 (31-73)||(17850919-17850961)
chr2 (31-81)||(19251802-19251852)
chr2 (31-73)||(22263526-22263568)
chr2 (31-73)||(26236427-26236469)
chr2 (31-88)||(20498735-20498792)
chr2 (31-71)||(19251476-19251516)
chr2 (31-71)||(23854693-23854733)
chr2 (31-71)||(42670722-42670762)
chr2 (31-78)||(23046705-23046752)
chr2 (31-78)||(23047915-23047962)
chr2 (34-73)||(26560891-26560930)
chr2 (37-83)||(13254490-13254536)
chr2 (31-73)||(23806285-23806327)
chr2 (1-30)||(19251533-19251562)
chr2 (1-30)||(20499031-20499060)
chr2 (1-30)||(22263254-22263283)
chr2 (1-30)||(23806238-23806267)
chr2 (1-30)||(23854751-23854780)
chr2 (1-30)||(26135880-26135909)
chr2 (1-30)||(26236381-26236410)
chr2 (31-71)||(12419055-12419095)
chr2 (31-71)||(12431115-12431155)
chr2 (37-73)||(15106404-15106440)
chr2 (31-79)||(26236124-26236172)
chr2 (31-71)||(30960004-30960044)
[»] scaffold0117 (2 HSPs)
scaffold0117 (31-71)||(12315-12355)
scaffold0117 (1-30)||(12268-12297)
[»] scaffold0449 (4 HSPs)
scaffold0449 (31-73)||(7533-7575)
scaffold0449 (36-73)||(7229-7266)
scaffold0449 (1-30)||(7289-7318)
scaffold0449 (1-30)||(7485-7514)
[»] scaffold0176 (1 HSPs)
scaffold0176 (31-80)||(15961-16010)
[»] scaffold0477 (1 HSPs)
scaffold0477 (31-83)||(4873-4925)
[»] scaffold0809 (1 HSPs)
scaffold0809 (31-73)||(1739-1781)
[»] scaffold0352 (2 HSPs)
scaffold0352 (35-85)||(4658-4708)
scaffold0352 (34-78)||(6015-6059)


Alignment Details
Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 5554914 - 5554863
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaat 82  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  5554914 aaccggaattcgctaatattacagggacgaaaagaggtatttaccctaaaat 5554863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 10108415 - 10108373
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  10108415 aaccggaattcgctaatattacagggacgaaaagaggtattta 10108373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 14820340 - 14820298
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  14820340 aaccggaattcgctaatattacagggacgaaaagaggtattta 14820298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 18044160 - 18044202
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  18044160 aaccggaattcgctaatattacagggacgaaaagaggtattta 18044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 43851710 - 43851668
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  43851710 aaccggaattcgctaatattacagggacgaaaagaggtattta 43851668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 10171476 - 10171525
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  10171476 aaccggaattcgctaatattacagggacgaaaagcggtatttaccctaaa 10171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 7689563 - 7689520
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||    
T  7689563 aattcgctaatattacagggacgaaaagaggtatttaccctaaa 7689520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 7689859 - 7689898
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7689859 cggaattcgctaatattacagggacgaaaagaggtattta 7689898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 35367455 - 35367406
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||||||||||||  |||||| |||||||||||||| ||||||    
T  35367455 aaccggaattcgctaatattgcagggaccaaaagaggtatttaccctaaa 35367406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 43481648 - 43481705
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatatta 88  Q
    ||||||||||||||||||||| || ||||||||||| |||||| ||| ||| ||||||    
T  43481648 aaccggaattcgctaatattacagtgacgaaaagagatatttacccttaaaaatatta 43481705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 10108703 - 10108743
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  10108703 aaccggaatttgctaatattacagggacgaaaagaggtatt 10108743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 14820627 - 14820667
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  14820627 aaccggaattcgctaatattacagggactaaaagaggtatt 14820667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 21147981 - 21147941
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  21147981 aaccggaattcgctaatattacagggacaaaaagaggtatt 21147941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 42605797 - 42605742
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatattac 89  Q
    ||||||||| |||||||| | ||||||||||| |||||| ||| ||||||||||||    
T  42605797 cggaattcgttaatattacatggacgaaaagaagtatttttccaaaaatatattac 42605742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 21148269 - 21148311
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||| ||||||||| || ||||||||||||||||||    
T  21148269 aaccggaattcactaatattacagagacgaaaagaggtattta 21148311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 30789840 - 30789882
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||  ||||||||| |||||||||||||||||||||    
T  30789840 aaccggaatttactaatattacagggacgaaaagaggtattta 30789882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 42113027 - 42112993
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggt 68  Q
    |||||||||||||||||| ||||||||||||||||    
T  42113027 cggaattcgctaatattacagggacgaaaagaggt 42112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 5555155 - 5555184
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  5555155 tgaaattacagggacaaaatctaaatcttt 5555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 5555202 - 5555239
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggt 68  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  5555202 aaccgaaattcgctaatattacagggacgaaaagaggt 5555239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 10108462 - 10108433
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  10108462 tgaaattacagggacaaaatctaaatcttt 10108433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 10108656 - 10108685
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  10108656 tgaaattacagggacaaaatctaaatcttt 10108685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14767599 - 14767570
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  14767599 tgaaattacagggacaaaatctaaatcttt 14767570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14820386 - 14820357
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  14820386 tgaaattacagggacaaaatctaaatcttt 14820357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14820580 - 14820609
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  14820580 tgaaattacagggacaaaatctaaatcttt 14820609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 17622929 - 17622888
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||| | ||||||||||||||||||| ||||    
T  17622929 aattcgctaatattacaaggacgaaaagaggtatttacccta 17622888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 21148029 - 21148000
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  21148029 tgaaattacagggacaaaatctaaatcttt 21148000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 26532875 - 26532846
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  26532875 tgaaattacagggacaaaatctaaatcttt 26532846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 30789793 - 30789822
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  30789793 tgaaattacagggacaaaatctaaatcttt 30789822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 43851756 - 43851727
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  43851756 tgaaattacagggacaaaatctaaatcttt 43851727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 1949697 - 1949645
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    |||||||||||| | |||||| |||||| |||||||||||| | |||||||||    
T  1949697 aaccggaattcgatcatattacagggaccaaaagaggtattaaccctaaaata 1949645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 2583411 - 2583383
Alignment:
Q  2 gaaattacagggacaaaatctaaatcttt 30  Q
    |||||||||||||||||||||||||||||    
T  2583411 gaaattacagggacaaaatctaaatcttt 2583383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 20877078 - 20877118
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  20877078 aaccggaattcgctcatattacagggaccaaaagaggtatt 20877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 26136726 - 26136690
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  26136726 ggaattcgctaatattacaggaacgaaaagaggtatt 26136690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 12244164 - 12244231
Alignment:
Q  77 taaaatatattacaacatgaataaaacacgtnnnnnnnntgtgagaataatataagttgttagttacc 144  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  12244164 taaaatatattacaacatgaataaaacacgtaaaaaaaatgtgagaataatataagttgttagttacc 12244231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 20419581 - 20419539
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20419581 aaccggaattcgctaatattatagggacgaaaagaggtattta 20419539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 12006583 - 12006536
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  12006583 cggaattcgctaatattacagggacgaaaagaggtatttaccctaaaa 12006536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 28218496 - 28218543
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  28218496 aaccggaattcgctaatattacagggacgaaaagaggtatttacccta 28218543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 12244286 - 12244324
Alignment:
Q  199 gttgttccatgaaaatgtaggtatttaacaaaatgaatt 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12244286 gttgttccatgaaaatgtaggtatttaacaaaatgaatt 12244324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 23704707 - 23704665
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  23704707 aaccggaattcgctaatattacagggacgaaaagaggtattta 23704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 28218223 - 28218181
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  28218223 aaccggaattcgctaatattacagggacgaaaagaggtattta 28218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 23704993 - 23705041
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    ||||||||||||||||||||| || |||||||||||||||||| |||||    
T  23704993 aaccggaattcgctaatattacagagacgaaaagaggtatttaccctaa 23705041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 20459023 - 20459070
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  20459023 aaccggaattccctaatattacagggacgaaaagaggtatttacccta 20459070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 20963826 - 20963873
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  20963826 aaccggaattcgctaatattacagggacaaaaagaggtatttacccta 20963873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 38879764 - 38879726
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  38879764 ggaattcgctaatattacagggacgaaaagaggtattta 38879726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 38880054 - 38880096
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  38880054 aaccggaatttgctaatattacagggacgaaaagaggtattta 38880096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 41600291 - 41600333
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  41600291 aaccggaattcgctaatattacagggacaaaaagaggtattta 41600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 24195210 - 24195247
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||| |||||||||||||||||||||    
T  24195210 gaattcgctaatattacagggacgaaaagaggtattta 24195247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 25772403 - 25772367
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25772403 aattcgctaatattacagggacgaaaagaggtattta 25772367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 25772668 - 25772712
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||    
T  25772668 ggaattcactaatattatagggacgaaaagagatatttaccctaa 25772712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 48672322 - 48672274
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||| |||||    
T  48672322 aaccgaaattcactaatattacagggacgaaaagaggtatttaccctaa 48672274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 20458737 - 20458682
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatat 86  Q
    |||||||||||| |||||||| ||||||||||| | ||||||| ||||||| ||||    
T  20458737 aaccggaattcgttaatattacagggacgaaaaaatgtatttaccctaaaaaatat 20458682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 48672612 - 48672659
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||| ||||||||||||||| || |||||||||||||||||| ||||    
T  48672612 aaccgaaattcgctaatattacagagacgaaaagaggtatttacccta 48672659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 7658014 - 7657972
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  7658014 aaccgaaattcgctaatattacatggacgaaaagaggtattta 7657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 7658298 - 7658340
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| |||||| |||||||| |||||||||||||||||||||    
T  7658298 aaccgaaattcgttaatattacagggacgaaaagaggtattta 7658340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 16995245 - 16995203
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| || ||||||||||||||||||    
T  16995245 aaccgaaattcgctaatattacagagacgaaaagaggtattta 16995203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 20419870 - 20419912
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||| |||||||| |||||| ||||||||||||||    
T  20419870 aaccggaattcgttaatattacagggacaaaaagaggtattta 20419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 23383838 - 23383880
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||    
T  23383838 gaattcactaatattacagggacgaaaagaggtatttacccta 23383880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 41600003 - 41599961
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||    
T  41600003 aaccgaaattcgctaatattacagggatgaaaagaggtattta 41599961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12006826 - 12006855
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  12006826 tgaaattacagggacaaaatctaaatcttt 12006855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 12006876 - 12006921
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    |||||||||||||||||| | | ||||||||||||||||| |||||    
T  12006876 cggaattcgctaatattacatgaacgaaaagaggtatttaccctaa 12006921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 20419628 - 20419599
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  20419628 tgaaattacagggacaaaatctaaatcttt 20419599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 20419822 - 20419851
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  20419822 tgaaattacagggacaaaatctaaatcttt 20419851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23383786 - 23383815
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  23383786 tgaaattacagggacaaaatctaaatcttt 23383815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23704947 - 23704976
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  23704947 tgaaattacagggacaaaatctaaatcttt 23704976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 24194955 - 24194926
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  24194955 tgaaattacagggacaaaatctaaatcttt 24194926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 25772617 - 25772646
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  25772617 tgaaattacagggacaaaatctaaatcttt 25772646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28218271 - 28218242
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  28218271 tgaaattacagggacaaaatctaaatcttt 28218242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 28218449 - 28218478
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  28218449 tgaaattacagggacaaaatctaaatcttt 28218478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38879816 - 38879787
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  38879816 tgaaattacagggacaaaatctaaatcttt 38879787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 41600244 - 41600273
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  41600244 tgaaattacagggacaaaatctaaatcttt 41600273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 48648353 - 48648324
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  48648353 tgaaattacagggacaaaatctaaatcttt 48648324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 31852163 - 31852203
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||| |||||| |||||||| |||||||||||||||||||    
T  31852163 aaccgaaattcgttaatattacagggacgaaaagaggtatt 31852203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 33162875 - 33162911
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||| || ||||||||||||||||||    
T  33162875 aattcgctaatattacagagacgaaaagaggtattta 33162911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 31799685 - 31799643
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31799685 aaccggaattcgctaatattatagggacgaaaagaggtattta 31799643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 14411742 - 14411693
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  14411742 aaccggaattcgctaatattacagggacgaaaagaggtatttaccctaaa 14411693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 31799972 - 31800013
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31799972 aaccggaattcgctaatattatagggacgaaaagaggtattt 31800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 23979234 - 23979286
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  23979234 aaccggaattcgctaatattacagggacgaaaagaggtatttacccaaaaata 23979286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 14143947 - 14143905
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  14143947 aaccggaattcgctaatattacagggacgaaaagaggtattta 14143905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 7126250 - 7126299
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  7126250 aaccggaattcgctaatattacagggatgaaaagaggtatttaccctaaa 7126299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 17762615 - 17762667
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    |||| ||||||||||||| || ||||||||||||||||||||| |||||||||    
T  17762615 aaccagaattcgctaatactacagggacgaaaagaggtatttaccctaaaata 17762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 18336509 - 18336470
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  18336509 cggaattcgctaatattatagggacgaaaagagatattta 18336470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 24651032 - 24651079
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||||    
T  24651032 aaccggaattcgctaatattacagagacgaaaagaggtatttacccta 24651079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 24837214 - 24837167
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  24837214 aaccggaattcgctattattacagggacgaaaagaggtatttacccta 24837167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 17762328 - 17762286
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  17762328 aaccggaattcgctaatattacagggacaaaaagaggtattta 17762286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 24837506 - 24837544
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  24837506 ggaattcgctaatattacagggacgaaaagaggtattta 24837544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 41001685 - 41001727
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  41001685 aaccggaattcgctaatattacagggacgaaaaaaggtattta 41001727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 14411998 - 14412055
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatatta 88  Q
    ||||| |||||| ||||||||||| || ||||||||||||||| |||||||| |||||    
T  14411998 aaccgaaattcgttaatattatagagatgaaaagaggtatttaccctaaaatttatta 14412055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 6817168 - 6817112
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatatt 87  Q
    ||||||||||| ||||||||| | ||||||||||||||||||| ||| |||| ||||    
T  6817168 aaccggaattcactaatattacaaggacgaaaagaggtatttacccttaaatgtatt 6817112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 24074348 - 24074300
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    ||||| ||||||||||||||| | ||||||||||||||||||| |||||    
T  24074348 aaccgaaattcgctaatattacatggacgaaaagaggtatttaccctaa 24074300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 993795 - 993753
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  993795 aaccggaattcgctaatattacagagacgaaaagaagtattta 993753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 4919322 - 4919364
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  4919322 aaccggaattcgctaatattccagagacgaaaagaggtattta 4919364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 18336789 - 18336830
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  18336789 aaccggaattcgctaat-ttacagggacgaaaagaggtattta 18336830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 24650747 - 24650705
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| |||||| |||||||| |||||||||||||||||||||    
T  24650747 aaccgaaattcgttaatattacagggacgaaaagaggtattta 24650705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4919082 - 4919053
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  4919082 tgaaattacagggacaaaatctaaatcttt 4919053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 7125960 - 7125923
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  7125960 cggaattcgctaatattacaggaacgaaaagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 7126203 - 7126232
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  7126203 tgaaattacagggacaaaatctaaatcttt 7126232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14143993 - 14143964
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  14143993 tgaaattacagggacaaaatctaaatcttt 14143964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14144187 - 14144216
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  14144187 tgaaattacagggacaaaatctaaatcttt 14144216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 18336560 - 18336531
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  18336560 tgaaattacagggacaaaatctaaatcttt 18336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 18336742 - 18336771
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  18336742 tgaaattacagggacaaaatctaaatcttt 18336771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23979187 - 23979216
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  23979187 tgaaattacagggacaaaatctaaatcttt 23979216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 24837455 - 24837484
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  24837455 tgaaattacagggacaaaatctaaatcttt 24837484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 31799732 - 31799703
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  31799732 tgaaattacagggacaaaatctaaatcttt 31799703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 27159287 - 27159327
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  27159287 aaccgaaattcgctaatattacaaggacgaaaagaggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 29445142 - 29445178
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  29445142 ggaattcgctaatattacagggacgaaaagagatatt 29445178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 14171919 - 14171969
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  14171919 aaccggaattcgctaatattacagggacgaaaagaggtatttaccctaaaa 14171969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9267020 - 9266978
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  9267020 aaccggaattcgctaatattacagggacgaaaagaggtattta 9266978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 14262369 - 14262411
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  14262369 aaccggaattcgctaatattacagggacgaaaagaggtattta 14262411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 16722036 - 16721994
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  16722036 aaccggaattcgctaatattacagggacgaaaagaggtattta 16721994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 19113098 - 19113140
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  19113098 aaccggaattcgttaatattatagggacgaaaagaggtattta 19113140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 35995723 - 35995673
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  35995723 aaccggaattcgctaatattacaggaacgaaaagaggtatttaccctaaaa 35995673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 49986572 - 49986523
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  49986572 aaccggaattctctaatattacagggacgaaaagaggtatttaccctaaa 49986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 5800937 - 5800977
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  5800937 aaccggaattcgctaatattacagggacgaaaagaggtatt 5800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 16722330 - 16722374
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  16722330 aattcgctaatattacagggacgaaaagaggtatttaccctaaaa 16722374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9267310 - 9267357
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||    
T  9267310 cggaattcgctaatattacaaggacgaaaagaggtatttaccctaaaa 9267357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 19112809 - 19112762
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  19112809 aaccggaattcgctaatattacatggacgaaaagaggtatttacccta 19112762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 19720378 - 19720336
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  19720378 aaccggaattcgctaatattacagggacgaaaagagatattta 19720336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 20853740 - 20853698
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  20853740 aaccgaaattcgctaatattacagggacgaaaagaggtattta 20853698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 27946198 - 27946240
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  27946198 aaccggaattcgctaatattactgggacgaaaagaggtattta 27946240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 30500377 - 30500415
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  30500377 ggaattcgctaatattacagggacgaaaagaggtattta 30500415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 33372451 - 33372401
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    |||| |||||||||||||||| |||||||||||||| |||||| |||||||    
T  33372451 aaccagaattcgctaatattacagggacgaaaagagatatttaccctaaaa 33372401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 38283595 - 38283545
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    |||||||||||| |||||||| ||||| |||||||| ||||||||||||||    
T  38283595 aaccggaattcgttaatattacagggatgaaaagagatatttatcctaaaa 38283545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 45969960 - 45969918
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  45969960 aaccggaattcactaatattacagggacgaaaagaggtattta 45969918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 27946154 - 27946109
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcc 76  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  27946154 aaccgaaattcgctaatattacagggacgaaaagaggtattaatcc 27946109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 14162203 - 14162243
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  14162203 aaccggaattcgctaatattacagggacaaaaagaggtatt 14162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 14262081 - 14262041
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  14262081 aaccggaattcgctaatattacagggacgaaaagagatatt 14262041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 21632940 - 21632904
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  21632940 aattcgctaatattacagggacgaaaagaggtattta 21632904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 14171629 - 14171590
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  14171629 cggaattcgctaatattacagggacgaaaagtggtattta 14171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 17649342 - 17649389
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||| ||||| |||| |||||||||||||||| ||||    
T  17649342 aaccggaattcgctagtattacagggtcgaaaagaggtatttaaccta 17649389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 35996011 - 35996050
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  35996011 cggaattcgctaatattacagggacgaaaagatgtattta 35996050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 49986861 - 49986908
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||| |||||||||||||||  |||||||||||||||||||| ||||    
T  49986861 aaccgaaattcgctaatattactgggacgaaaagaggtatttacccta 49986908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 5800650 - 5800608
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| |||||| |||||||| |||||||||||||||||||||    
T  5800650 aaccgaaattcgttaatattacagggacgaaaagaggtattta 5800608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 14161912 - 14161874
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  14161912 ggaattcgctaatattacagggacgaaaagagatattta 14161874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 17465407 - 17465361
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtatttatcctaaaat 82  Q
    |||||||||||||||| | |||| |||||||||||||| ||||||||    
T  17465407 gaattcgctaatattaaaaggacaaaaagaggtatttaccctaaaat 17465361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 20854028 - 20854078
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||| ||||||||||||||| | |||||||||||| |||||| |||||||    
T  20854028 aaccgaaattcgctaatattacatggacgaaaagagatatttaccctaaaa 20854078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 21633235 - 21633281
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    ||||||||||||||| |||||||| || ||||||||| |||||||||    
T  21633235 aattcgctaatattacagggacgagaataggtatttaccctaaaata 21633281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 45970249 - 45970291
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||    
T  45970249 aaccgaaattcactaatattacagggacgaaaagaggtattta 45970291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9267067 - 9267038
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  9267067 tgaaattacagggacaaaatctaaatcttt 9267038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14171678 - 14171649
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  14171678 tgaaattacagggacaaaatctaaatcttt 14171649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14262322 - 14262351
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  14262322 tgaaattacagggacaaaatctaaatcttt 14262351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15328746 - 15328775
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  15328746 tgaaattacagggacaaaatctaaatcttt 15328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 16722277 - 16722306
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  16722277 tgaaattacagggacaaaatctaaatcttt 16722306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17649296 - 17649325
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  17649296 tgaaattacagggacaaaatctaaatcttt 17649325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19720425 - 19720396
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  19720425 tgaaattacagggacaaaatctaaatcttt 19720396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 20853982 - 20854011
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  20853982 tgaaattacagggacaaaatctaaatcttt 20854011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 21633182 - 21633211
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  21633182 tgaaattacagggacaaaatctaaatcttt 21633211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33372498 - 33372469
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  33372498 tgaaattacagggacaaaatctaaatcttt 33372469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33372690 - 33372719
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  33372690 tgaaattacagggacaaaatctaaatcttt 33372719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 33372743 - 33372784
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    |||||||||||||||  |||||||||||||||||||| ||||    
T  33372743 aattcgctaatattacggggacgaaaagaggtatttacccta 33372784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 43572434 - 43572385
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||| ||||||    
T  43572434 aaccgaaattcgctaatattacaggaacgaaaagatgtatttaccctaaa 43572385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 45003588 - 45003559
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  45003588 tgaaattacagggacaaaatctaaatcttt 45003559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 45970007 - 45969978
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  45970007 tgaaattacagggacaaaatctaaatcttt 45969978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 49986620 - 49986591
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  49986620 tgaaattacagggacaaaatctaaatcttt 49986591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 3424819 - 3424779
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||| |||||||||||| |||||| ||||||||||||    
T  3424819 aaccggaaatcgctaatattacagggaccaaaagaggtatt 3424779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 3425981 - 3426021
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  3425981 aaccggaattcgctaatattacaggggccaaaagaggtatt 3426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 14171873 - 14171901
Alignment:
Q  2 gaaattacagggacaaaatctaaatcttt 30  Q
    |||||||||||||||||||||||||||||    
T  14171873 gaaattacagggacaaaatctaaatcttt 14171901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 17465706 - 17465742
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||| | |||||||||||||||||||    
T  17465706 aattcgctaatattacaaggacgaaaagaggtattta 17465742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 30500088 - 30500048
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||| ||||||||||||||| ||||| |||||||||||||    
T  30500088 aaccgaaattcgctaatattacagggatgaaaagaggtatt 30500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 43572723 - 43572779
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatatt 87  Q
    |||||||||| |  ||||||| ||||| ||||||||||||||| |||||||| ||||    
T  43572723 aaccggaatttgtcaatattacagggatgaaaagaggtatttaccctaaaatttatt 43572779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 17606346 - 17606300
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  17606346 cggaattcgctaatattacagggacgaaaagaggtatttatcctaaa 17606300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 18462331 - 18462289
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  18462331 aaccggaattcgctaatattacagggacgaaaagaggtattta 18462289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 33628735 - 33628686
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  33628735 aaccagaattcgctaatattacagggacgaaaagaggtatttaccctaaa 33628686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 17606639 - 17606679
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  17606639 aaccggaattcgctaatattacagggacgaaaagaggtatt 17606679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 29696610 - 29696558
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||    
T  29696610 aaccgaaattcgctaatattacagggacgaaaagaggtatttaccctagaata 29696558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 39711405 - 39711447
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  39711405 aaccagaattcgctaatattacagggacgaaaagaggtattta 39711447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 8293146 - 8293183
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  8293146 gaattcgttaatattatagggacgaaaagaggtattta 8293183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 27039683 - 27039643
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  27039683 aaccggaattcgctcatattacagggacgaaaagaggtatt 27039643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 33629023 - 33629063
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  33629023 aaccggaattcgctaatattacagggacaaaaagaggtatt 33629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 39826089 - 39826053
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39826089 aattcgctaatattatatggacgaaaagaggtattta 39826053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 43400798 - 43400758
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  43400798 aaccggaattcgctcatattatagagacgaaaagaggtatt 43400758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 52058347 - 52058383
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  52058347 aattcgctaatattacagggacgaaaagaggtattta 52058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 20995743 - 20995696
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||||||||| || || ||||||||||||||| ||||    
T  20995743 aaccggaattcgctaatattacagagatgaaaagaggtatttacccta 20995696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 4907002 - 4906956
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtatttatcctaaaat 82  Q
    |||||| ||||||||| ||||||||||||||||||||| ||| ||||    
T  4907002 gaattcactaatattacagggacgaaaagaggtatttacccttaaat 4906956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 18342350 - 18342392
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||    
T  18342350 aaccgaaattcgctaatattacagggacgaaaaaaggtattta 18342392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 24467670 - 24467632
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  24467670 ggaattcgctaatattacagggacgaaaagatgtattta 24467632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 30299269 - 30299235
Alignment:
Q  39 ttcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||| |||||||||||||||||||||    
T  30299269 ttcgctaatattacagggacgaaaagaggtattta 30299235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 39826379 - 39826421
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  39826379 aaccgaaattcgctaatattacatggacgaaaagaggtattta 39826421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 48072294 - 48072344
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||||||||| ||||||||| |  |||||||||||||||||| |||||||    
T  48072294 aaccggaattcactaatattacaatgacgaaaagaggtatttaccctaaaa 48072344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 52058056 - 52058014
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||| |||||||| | |||||||||||||||||||    
T  52058056 aaccggaattcgttaatattacaaggacgaaaagaggtattta 52058014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 4907248 - 4907277
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  4907248 tgaaattacagggacaaaatctaaatcttt 4907277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8293093 - 8293122
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  8293093 tgaaattacagggacaaaatctaaatcttt 8293122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 18462377 - 18462348
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  18462377 tgaaattacagggacaaaatctaaatcttt 18462348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 18462617 - 18462658
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattt 72  Q
    |||||||||| |||||||||| ||||| ||||||||||||||    
T  18462617 aaccggaatttgctaatattacagggaggaaaagaggtattt 18462658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 24467720 - 24467691
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  24467720 tgaaattacagggacaaaatctaaatcttt 24467691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 24467913 - 24467942
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  24467913 tgaaattacagggacaaaatctaaatcttt 24467942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 30299323 - 30299294
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  30299323 tgaaattacagggacaaaatctaaatcttt 30299294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 39826142 - 39826113
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  39826142 tgaaattacagggacaaaatctaaatcttt 39826113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 39826332 - 39826361
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  39826332 tgaaattacagggacaaaatctaaatcttt 39826361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 48072053 - 48072024
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  48072053 tgaaattacagggacaaaatctaaatcttt 48072024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 42510348 - 42510388
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  42510348 aaccggaattcgctaatattacagggaccaaaagtggtatt 42510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 43539680 - 43539720
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||||| |||||||||| |||||||||||||| ||||    
T  43539680 aaccggaatttgctaatattacagggacgaaaagagctatt 43539720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 24731980 - 24731923
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatatta 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  24731980 aaccggaattcgctaatattacagggacgaaaagaggtatttaccctacaataaatta 24731923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 18500360 - 18500305
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatat 86  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  18500360 aaccgaaattcgctaatattatagggacgaaaagaggtatttacccttaaaaatat 18500305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9481227 - 9481185
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  9481227 aaccggaattcgctaatattacagggacgaaaagaggtattta 9481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 26385610 - 26385651
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatc 75  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  26385610 cggaattcgctaatattacagggacgaaaagaggtatttatc 26385651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 18500662 - 18500709
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  18500662 aaccgaaattcgctaatattacagggacgaaaagaggtatttacccta 18500709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 2299646 - 2299696
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||||||||||||||||||| ||| |||||||||| |||||| |||||||    
T  2299646 aaccggaattcgctaatattacaggaacgaaaagagatatttaccctaaaa 2299696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 24732274 - 24732312
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  24732274 ggaattcgctaatattacagggacgaaaagaggtattta 24732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 32017836 - 32017878
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  32017836 aaccggaattcgctaatattacagggacgaaaagagatattta 32017878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 10321778 - 10321737
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattt 72  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  10321778 aaccggaattcgctaatattacagggacgaaaagaagtattt 10321737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 26385323 - 26385281
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||| |||||||||||||||| || ||||||||||||||||||    
T  26385323 aaccagaattcgctaatattacagagacgaaaagaggtattta 26385281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 30458945 - 30458899
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcct 77  Q
    ||||| ||||| ||||||||| ||||||||||||| |||||||||||    
T  30458945 aaccgaaattcactaatattacagggacgaaaagatgtatttatcct 30458899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 33714528 - 33714494
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaaga 65  Q
    ||||||||||||||||||||| |||||||||||||    
T  33714528 aaccggaattcgctaatattacagggacgaaaaga 33714494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9154972 - 9154943
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  9154972 tgaaattacagggacaaaatctaaatcttt 9154943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 18500406 - 18500377
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  18500406 tgaaattacagggacaaaatctaaatcttt 18500377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19284221 - 19284192
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  19284221 tgaaattacagggacaaaatctaaatcttt 19284192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 30618007 - 30617970
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  30618007 gaattcactaatattacagggacgaaaagaggtattta 30617970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 32017790 - 32017819
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  32017790 tgaaattacagggacaaaatctaaatcttt 32017819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 3018056 - 3018011
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcc 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3018056 aaccggaattcgctaatattacagggacgaaaagaggtatttatcc 3018011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 31218314 - 31218371
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatatta 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| | |||||||    
T  31218314 aaccggaattcgctaatattacagggacgaaaagaggtatttaccctatattatatta 31218371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 7819060 - 7819012
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||    
T  7819060 aaccggaattcgctaatattatatggtcgaaaagaggtatttaacctaa 7819012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 9397031 - 9397083
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    |||||||||| |||||||||| ||||||||||||| ||||||| |||||||||    
T  9397031 aaccggaatttgctaatattacagggacgaaaagaagtatttaccctaaaata 9397083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 38574301 - 38574349
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  38574301 aaccagaattcgctaatattacagggacgaaaaaaggtatttatcctaa 38574349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 48580199 - 48580239
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  48580199 aaccggaattcgctaatattacagggacgaaaagaggtatt 48580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 9396738 - 9396699
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatcc 76  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  9396738 aattcgctaatattacagggacgaaaagaggtatttatcc 9396699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 46046757 - 46046811
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatat 86  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||    
T  46046757 aaccggaattcgctaatattacagggacgaaaa-aggtatttacccttaaatatat 46046811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9516655 - 9516613
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  9516655 aaccggaattcgctaatattacagggacgaaaagagatattta 9516613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 41947010 - 41946968
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  41947010 aaccggaattcactaatattacagggacgaaaagaggtattta 41946968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 48259868 - 48259826
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  48259868 aaccggaattcgctaatattacagggacgaaaagagatattta 48259826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 3273663 - 3273618
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||    
T  3273663 cggaattcgctaatattacagggacgaaaagagatatttaccctaa 3273618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 15640761 - 15640724
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggt 68  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15640761 aaccggaattcgctaatattacagggacgaaaagaggt 15640724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 31943994 - 31943946
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  31943994 aaccggaattcgctaatattacagggacgaaaaga-gtatttaccctaaa 31943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 12904786 - 12904750
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||||||||||||||| ||||||    
T  12904786 aattcgctaatattatagggacgaaaagagatattta 12904750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 18667627 - 18667663
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18667627 ggaattcgctaatattacagggacgaaaagaggtatt 18667663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 46046472 - 46046428
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||    
T  46046472 cggaattcgctaatattacagggacgaaaaaaggtatttacccta 46046428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 9516943 - 9516985
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||    
T  9516943 aaccgaaattcgctaatattacagggacgaaaagagatattta 9516985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9619025 - 9618983
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| | ||||||||| |||||||||    
T  9619025 aaccggaattcgctaatattacatggacgaaaataggtattta 9618983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 9619312 - 9619354
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||| |||||||||||||||| |||||| ||||||||||||||    
T  9619312 aaccagaattcgctaatattacagggacaaaaagaggtattta 9619354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 15641049 - 15641091
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||| ||||||||| | |||||||||||||||||||    
T  15641049 aaccggaattcactaatattacaaggacgaaaagaggtattta 15641091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 26252574 - 26252612
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  26252574 ggaattcgctaatattacagggacgaaaagagatattta 26252612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 31082226 - 31082188
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  31082226 ggaattcgctcatattatagggacgaaaaggggtattta 31082188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 35376208 - 35376166
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||| |||||||||||||||| ||||||||||| |||||||||    
T  35376208 aaccagaattcgctaatattacagggacgaaaataggtattta 35376166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 35376464 - 35376506
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtatttatcct 77  Q
    |||||| |||||||||| |||||||||||||| ||||||||||    
T  35376464 ggaatttgctaatattacagggacgaaaagagatatttatcct 35376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 37013039 - 37013081
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||| |||||||||||||||| |||||||||| ||||||||||    
T  37013039 aaccagaattcgctaatattacagggacgaaatgaggtattta 37013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 41947187 - 41947229
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||    
T  41947187 aaccgaaattcgctaatattacagggacgaaaagagatattta 41947229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 46935178 - 46935212
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatt 71  Q
    |||||||||||||||||||||| ||||||||||||    
T  46935178 aattcgctaatattatagggaccaaaagaggtatt 46935212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 3018104 - 3018075
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  3018104 tgaaattacagggacaaaatctaaatcttt 3018075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7819106 - 7819077
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  7819106 tgaaattacagggacaaaatctaaatcttt 7819077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 9396985 - 9397014
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  9396985 tgaaattacagggacaaaatctaaatcttt 9397014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 9516896 - 9516925
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  9516896 tgaaattacagggacaaaatctaaatcttt 9516925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9619072 - 9619043
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  9619072 tgaaattacagggacaaaatctaaatcttt 9619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 13132278 - 13132319
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||    
T  13132278 aattcgctaatattacagggacgaaaataggtatttacccta 13132319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 15640807 - 15640778
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  15640807 tgaaattacagggacaaaatctaaatcttt 15640778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 26252523 - 26252552
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  26252523 tgaaattacagggacaaaatctaaatcttt 26252552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 31090153 - 31090124
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  31090153 tgaaattacagggacaaaatctaaatcttt 31090124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 31218292 - 31218255
Alignment:
Q  48 attatagggacgaaaagaggtatttatcctaaaatata 85  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  31218292 attatagggacgaaaagaggtatttaccctataatata 31218255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 31944042 - 31944013
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  31944042 tgaaattacagggacaaaatctaaatcttt 31944013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 34064022 - 34063985
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  34064022 gaattcgttaatattacagggacgaaaagaggtattta 34063985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37012799 - 37012770
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  37012799 tgaaattacagggacaaaatctaaatcttt 37012770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38574060 - 38574031
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  38574060 tgaaattacagggacaaaatctaaatcttt 38574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 38574254 - 38574283
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  38574254 tgaaattacagggacaaaatctaaatcttt 38574283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 46046710 - 46046739
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  46046710 tgaaattacagggacaaaatctaaatcttt 46046739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 48260037 - 48260066
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  48260037 tgaaattacagggacaaaatctaaatcttt 48260066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 4355927 - 4355887
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  4355927 aaccggaattcgctaatattatatgaacaaaaagaggtatt 4355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 4356213 - 4356253
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||| ||||||||||||||| ||||| |||||||||||||    
T  4356213 aaccgaaattcgctaatattacagggatgaaaagaggtatt 4356253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 105
Target Start/End: Complemental strand, 5099363 - 5099335
Alignment:
Q  77 taaaatatattacaacatgaataaaacac 105  Q
    |||||||||||||||||||||||||||||    
T  5099363 taaaatatattacaacatgaataaaacac 5099335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 31090400 - 31090436
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  31090400 aattcgctaatattacagggacgaaaagagatattta 31090436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 48260089 - 48260125
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  48260089 aattcgctaatattacagggacgaaaagagatattta 48260125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 50462733 - 50462769
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  50462733 ggaattcgctaatattacagggaccaaaagaggtatt 50462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 4895 - 4946
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaat 82  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  4895 aaccggaatttgctaatattacagggacgaaaagaggtatttaccctaaaat 4946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 4604 - 4565
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  4604 cggaattcgctaatattacaaggacgaaaagaggtattta 4565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 3914 - 3864
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  3914 aaccggaattcgctaatattacagggacgaaaagagatatttaccctaaaa 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 8370 - 8320
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||||||    
T  8370 aaccgaaattcgctaatattacagggacgaaaagaggtatttaccctaaaa 8320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 23855027 - 23855069
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  23855027 aaccggaattcgctaatattacagggacgaaaagaggtattta 23855069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 13254769 - 13254814
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcc 76  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||    
T  13254769 aaccggaattcgctaatattacagggacgaaaagagatatttatcc 13254814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 17850629 - 17850590
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  17850629 cggaattcgctaatattacagggacgaaaagaggtattta 17850590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 17463137 - 17463103
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaaga 65  Q
    |||||||||||||||||||||||||||||||||||    
T  17463137 aaccggaattcgctaatattatagggacgaaaaga 17463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 17463424 - 17463466
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  17463424 aaccggaattcgctaatattacaggggcgaaaagaggtattta 17463466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 17850919 - 17850961
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  17850919 aaccgaaattcgctaatattacagggacgaaaagaggtattta 17850961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 19251802 - 19251852
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaa 81  Q
    ||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  19251802 aaccggaattcactaatattacaaggacgaaaagaggtatttaccctaaaa 19251852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 22263526 - 22263568
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  22263526 aaccggaattcgctaatattacaggaacgaaaagaggtattta 22263568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 26236427 - 26236469
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  26236427 aaccgaaattcgctaatattacagggacgaaaagaggtattta 26236469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 20498792 - 20498735
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatatatta 88  Q
    ||||| ||||||||||||||| |  |||||||||||||||||| |||||||| |||||    
T  20498792 aaccgtaattcgctaatattacatagacgaaaagaggtatttaccctaaaatttatta 20498735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 19251516 - 19251476
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  19251516 aaccgaaattcgctaatattacagggacgaaaagaggtatt 19251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 23854733 - 23854693
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  23854733 aaccgaaattcgctaatattacagggacgaaaagaggtatt 23854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 42670762 - 42670722
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  42670762 aaccggaattcgctactattacagggacgaaaagaggtatt 42670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 23046752 - 23046705
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    |||||||||||||| |||||| | ||||||||||||||||||| ||||    
T  23046752 aaccggaattcgctcatattacaaggacgaaaagaggtatttacccta 23046705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 23047915 - 23047962
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    |||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  23047915 aaccggaattcgctcatattacagggacgaaaataggtatttacccta 23047962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 26560891 - 26560930
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  26560891 cggaattcgctaatattacaaggacgaaaagaggtattta 26560930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 13254536 - 13254490
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    ||||||||||||||| ||| ||| ||||||||||||| |||||||||    
T  13254536 aattcgctaatattacaggaacggaaagaggtatttaccctaaaata 13254490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 23806285 - 23806327
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||    
T  23806285 aaccgaaattcgctaatattacagggacaaaaagaggtattta 23806327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19251562 - 19251533
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  19251562 tgaaattacagggacaaaatctaaatcttt 19251533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 20499031 - 20499060
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  20499031 tgaaattacagggacaaaatctaaatcttt 20499060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 22263283 - 22263254
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  22263283 tgaaattacagggacaaaatctaaatcttt 22263254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23806238 - 23806267
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  23806238 tgaaattacagggacaaaatctaaatcttt 23806267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 23854780 - 23854751
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  23854780 tgaaattacagggacaaaatctaaatcttt 23854751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 26135909 - 26135880
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  26135909 tgaaattacagggacaaaatctaaatcttt 26135880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 26236381 - 26236410
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  26236381 tgaaattacagggacaaaatctaaatcttt 26236410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 12419055 - 12419095
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  12419055 aaccggaattcgctaatattacagggaccaaaagtggtatt 12419095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 12431115 - 12431155
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  12431115 aaccggaattcgctaatattacagggaccaaaagtggtatt 12431155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 15106404 - 15106440
Alignment:
Q  37 aattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||  ||||||||||||||||||||    
T  15106404 aattcgctaatattacggggacgaaaagaggtattta 15106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 26236172 - 26236124
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaa 79  Q
    |||| |||||||||||||||| | |||||||||||| |||||| |||||    
T  26236172 aaccagaattcgctaatattacaaggacgaaaagagatatttaccctaa 26236124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 30960004 - 30960044
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  30960004 aaccggaattcgctaatattacagggaccaaaagtggtatt 30960044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 12315 - 12355
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatt 71  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  12315 aaccggaattcgctaatattacagggacgaaaagaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12268 - 12297
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  12268 tgaaattacagggacaaaatctaaatcttt 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 7533 - 7575
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  7533 aaccggaattcgctaatattacagggacgaaaataggtattta 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 7266 - 7229
Alignment:
Q  36 gaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||||||| | |||||||||||||||||||    
T  7266 gaattcgctaatattacaaggacgaaaagaggtattta 7229  T

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Target: scaffold0449; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7318 - 7289
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  7318 tgaaattacagggacaaaatctaaatcttt 7289  T

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Target: scaffold0449; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 7485 - 7514
Alignment:
Q  1 tgaaattacagggacaaaatctaaatcttt 30  Q
    ||||||||||||||||||||||||||||||    
T  7485 tgaaattacagggacaaaatctaaatcttt 7514  T

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Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 15961 - 16010
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaa 80  Q
    ||||||||||||||||||||| | |||||||||||| |||||| ||||||    
T  15961 aaccggaattcgctaatattacatggacgaaaagagatatttaccctaaa 16010  T

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Target: scaffold0477 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 4925 - 4873
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtatttatcctaaaata 83  Q
    ||||| ||||||||||||||| ||| || |||||||||||||| |||||||||    
T  4925 aaccgaaattcgctaatattacaggaacaaaaagaggtatttaccctaaaata 4873  T

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Target: scaffold0809 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 1739 - 1781
Alignment:
Q  31 aaccggaattcgctaatattatagggacgaaaagaggtattta 73  Q
    |||||||||||| |||||||| ||||||||||||||| |||||    
T  1739 aaccggaattcgttaatattacagggacgaaaagagggattta 1781  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 4708 - 4658
Alignment:
Q  35 ggaattcgctaatattatagggacgaaaagaggtatttatcctaaaatata 85  Q
    ||||||||||||||||  |||||| |||||||||||||| ||||| |||||    
T  4708 ggaattcgctaatattgcagggactaaaagaggtatttaccctaatatata 4658  T

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Target: scaffold0352; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 6015 - 6059
Alignment:
Q  34 cggaattcgctaatattatagggacgaaaagaggtatttatccta 78  Q
    |||||||||||||||||  |||||| |||||||||||||| ||||    
T  6015 cggaattcgctaatattgcagggaccaaaagaggtatttacccta 6059  T

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