View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17177_low_4 (Length: 309)
Name: NF17177_low_4
Description: NF17177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17177_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 30948787 - 30949069
Alignment:
| Q |
18 |
tattttgtataagaacatcatcatcaatttgcttgcacagaagatattcaattttgcttcctaaattttgaatttcatccaaacagaggattcgctggtt |
117 |
Q |
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| T |
30948787 |
tattttgtataagaacatcatcatcaatttgcttgcacagaagatattcaattttgcttcctaaattttgaagttcatccaaacagaggattcgctggtt |
30948886 |
T |
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| Q |
118 |
cacaacagctccaaatattttcagctcatcaattaaagtctttatgctctcacnnnnnnntttagtctctatttccatcttatcaaatttcccctgttat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
30948887 |
cacaacagctccaaatattttcagctcatcaattaaagtctttatgctctcacaaaaaaatttagtctctatttccatcttatcaaatttcccctgttat |
30948986 |
T |
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| Q |
218 |
ccataaaaaagaaatgcgtacatgttgcacagattcagctttagtttatgtatcactccacaattacaatagtcaagaataat |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
30948987 |
ccataaaaaagaaatgcgtacatgttgcacagattcagctttattttatgtatcactccacaattacaatagtcaagaataat |
30949069 |
T |
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