View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17179_high_19 (Length: 334)
Name: NF17179_high_19
Description: NF17179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17179_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 316
Target Start/End: Complemental strand, 10008547 - 10008249
Alignment:
| Q |
18 |
aaaggagcataaacattaactagaataaactcctcgttagttttcacaaagcttccatcaatcaaaagaacatgattgaaagtaaaagacaaccacacct |
117 |
Q |
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|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||| |
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| T |
10008547 |
aaaggaacataaacattaactagaataaactcctcattagttttcacaaagcttccattaatcaaaagaacatgattgaaagtaaaggacaaccagacct |
10008448 |
T |
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| Q |
118 |
caacctcaaggcaatcccaaataattaccatacctcctgagcaccaactaaagaacaaaaagaatagacatgaggcaagctgccttaaataggaggacat |
217 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| |
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| T |
10008447 |
caacctcaaggcaatcccaaataattatcatacctcctgagcaccaactaaagaataaaaagaatagacatgaggcaagctgccctatataggaggacat |
10008348 |
T |
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| Q |
218 |
aacagatcatcaatataacataacttggtttttcaatttaaaaaatagatgaccacgtatcacccaccaattatcaaacctccaacctcttctcaaaac |
316 |
Q |
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|||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
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| T |
10008347 |
aacagatcatcaatataacataacttggattttcaatttagataatagatgaccacgtatcacccaccaaatgtcaaacctccaacctcttctcaaaac |
10008249 |
T |
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