View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17179_low_20 (Length: 326)
Name: NF17179_low_20
Description: NF17179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17179_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 35211155 - 35210832
Alignment:
| Q |
1 |
gtttatttacctcttgtgttttaagaaaggacacaacgtatttgatgaggatagtattagtattgagattgttta----------------aattgataa |
84 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
35211155 |
gtttatttacctcttgtgttttaagaaaggacacaacgtatttgatgaggatagtattagtattgagattgtttaggtaacctggtgcctaaattgataa |
35211056 |
T |
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| Q |
85 |
ctttatgttcaccccccattcattttgtgtaaatattgttattttattaaagaatgagaatgaatattctaattattttggtatgggatggtacaacttt |
184 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35211055 |
ctttatgttcaccccccattcattttgtgtaaatattgttattttattaaagaatgagaatgaatattctaattattttggtatgggatggtacaacttt |
35210956 |
T |
|
| Q |
185 |
gcagcatcagcagcacttggaatatactatggtgattgtcctaactatgatgaccggttttaaagagatacttttacatataaatcggtcacaaattttc |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
35210955 |
gcagcatcagcagcacttggaatatactatggtgattgtcctaactatgatgaccggttttaaagagatgcttttacatataaatcggtcacaaattttc |
35210856 |
T |
|
| Q |
285 |
catgttgatcatgaatcaaactac |
308 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
35210855 |
catgttgatcatgaatcaaactac |
35210832 |
T |
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