View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17179_low_40 (Length: 202)

Name: NF17179_low_40
Description: NF17179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17179_low_40
NF17179_low_40
[»] chr6 (47 HSPs)
chr6 (19-186)||(26861548-26861715)
chr6 (21-186)||(31284220-31284385)
chr6 (19-184)||(26823774-26823939)
chr6 (30-175)||(26622919-26623064)
chr6 (30-175)||(26728897-26729042)
chr6 (19-186)||(27677702-27677869)
chr6 (24-174)||(26646423-26646573)
chr6 (24-174)||(26752391-26752541)
chr6 (24-188)||(27718472-27718636)
chr6 (19-186)||(27698582-27698749)
chr6 (24-186)||(26802374-26802536)
chr6 (24-186)||(27593113-27593275)
chr6 (24-186)||(27611095-27611257)
chr6 (28-186)||(27724942-27725100)
chr6 (24-186)||(28781071-28781233)
chr6 (19-186)||(27678878-27679045)
chr6 (19-178)||(27706490-27706649)
chr6 (24-186)||(27604798-27604960)
chr6 (33-186)||(28786210-28786363)
chr6 (33-186)||(28792331-28792484)
chr6 (19-186)||(27229164-27229331)
chr6 (19-186)||(27531285-27531452)
chr6 (19-185)||(25579652-25579818)
chr6 (19-186)||(27338153-27338320)
chr6 (19-186)||(27398893-27399060)
chr6 (19-184)||(26142799-26142964)
chr6 (19-186)||(26655921-26656088)
chr6 (19-186)||(26761892-26762059)
chr6 (19-185)||(25481675-25481841)
chr6 (19-186)||(28234496-28234663)
chr6 (19-185)||(26055859-26056025)
chr6 (19-185)||(26075829-26075995)
chr6 (19-184)||(25538474-25538639)
chr6 (19-175)||(26884106-26884262)
chr6 (97-186)||(29825959-29826048)
chr6 (24-79)||(28139580-28139635)
chr6 (19-186)||(28242736-28242903)
chr6 (19-185)||(26048778-26048944)
chr6 (19-185)||(26069947-26070113)
chr6 (24-174)||(25507002-25507146)
chr6 (19-79)||(28181153-28181213)
chr6 (19-79)||(28185405-28185465)
chr6 (19-151)||(28226917-28227049)
chr6 (24-79)||(28325520-28325575)
chr6 (86-148)||(29467797-29467859)
chr6 (142-186)||(27427814-27427858)
chr6 (126-186)||(27665312-27665372)
[»] chr1 (3 HSPs)
chr1 (19-174)||(268432-268587)
chr1 (19-154)||(28164437-28164572)
chr1 (19-79)||(28127754-28127814)
[»] chr4 (7 HSPs)
chr4 (19-174)||(18724160-18724315)
chr4 (19-174)||(18679642-18679797)
chr4 (19-186)||(18699475-18699642)
chr4 (19-186)||(18731579-18731746)
chr4 (19-174)||(18655552-18655707)
chr4 (142-186)||(17989248-17989292)
chr4 (142-186)||(18073697-18073741)
[»] chr8 (2 HSPs)
chr8 (19-174)||(29273858-29274013)
chr8 (59-186)||(31903783-31903910)
[»] scaffold0349 (2 HSPs)
scaffold0349 (28-186)||(14452-14610)
scaffold0349 (19-186)||(3509-3677)
[»] scaffold1254 (1 HSPs)
scaffold1254 (24-186)||(10-172)
[»] scaffold0419 (1 HSPs)
scaffold0419 (24-186)||(7457-7619)
[»] scaffold0277 (2 HSPs)
scaffold0277 (24-186)||(13725-13887)
scaffold0277 (28-186)||(4768-4926)
[»] scaffold0038 (4 HSPs)
scaffold0038 (19-186)||(34657-34824)
scaffold0038 (19-186)||(42898-43065)
scaffold0038 (19-151)||(27415-27547)
scaffold0038 (24-79)||(116835-116890)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-186)||(58370-58537)
[»] chr2 (1 HSPs)
chr2 (97-186)||(17993850-17993939)
[»] scaffold0003 (1 HSPs)
scaffold0003 (142-186)||(59505-59549)


Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 26861715 - 26861548
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  26861715 atgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaag 26861616  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26861615 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattaccggtaaaac 26861548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 31284385 - 31284220
Alignment:
Q  21 gacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagtt 120  Q
    |||||||||||||||||| |||||||||| || || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||    
T  31284385 gacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctctttgaagtt 31284286  T
Q  121 cacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  31284285 cactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagattgccggtgaaac 31284220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 26823939 - 26823774
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  | ||||||| ||| ||||| |||||||||||||||    
T  26823939 atgaagaagaggcatagttggcagaaaacacaggaataaaaatcctagactcttcaatggcattattgagtgattgttcgattttatcccctctttgaag 26823840  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaa 184  Q
    |||||||||||| |  |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  26823839 ttcacgatcatcaaaaaaggtgtggattcccttgtctgtaagagccttgtagagattgccggtaaa 26823774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 26623064 - 26622919
Alignment:
Q  30 gcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatcat 129  Q
    |||||||||  ||||||||||||||| ||||||||||||||||| || |||| ||| |||||| |||||||||| |||||||||||||||||||||||||    
T  26623064 gcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatggtttgatttcgtcccctctttgaagttcacgatcat 26622965  T
Q  130 ccatgaaggtgtgaattcccttgtcagtaagagccttgtagagatt 175  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||    
T  26622964 caatgaaggtgtggattcccttgtcagtaagagccttgtagagatt 26622919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 26729042 - 26728897
Alignment:
Q  30 gcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatcat 129  Q
    |||||||||  ||||||||||||||| ||||||||||||||||| || |||| ||| |||||| |||||||||| |||||||||||||||||||||||||    
T  26729042 gcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatggtttgatttcgtcccctctttgaagttcacgatcat 26728943  T
Q  130 ccatgaaggtgtgaattcccttgtcagtaagagccttgtagagatt 175  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||    
T  26728942 caatgaaggtgtggattcccttgtcagtaagagccttgtagagatt 26728897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 27677702 - 27677869
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| | |   |||||| || ||||||||||||||||||||||    
T  27677702 atgaagaagaggcatagttgatagaaaacacagcaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatcccctctttgaag 27677801  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    |||| |||  || ||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  27677802 ttcatgattgtcaatgaaggtgtggattcccttgtcatcaagagccttgtagagattgccggtgaaac 27677869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 174
Target Start/End: Complemental strand, 26646573 - 26646423
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| | |  ||||||| || |||||||||| ||||| | ||| ||||    
T  26646573 gaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctcttaagatcac 26646474  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26646473 aatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 26646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 174
Target Start/End: Complemental strand, 26752541 - 26752391
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| | |  ||||||| || |||||||||| ||||| | ||| ||||    
T  26752541 gaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctcttaagatcac 26752442  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26752441 aatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 26752391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 27718472 - 27718636
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| || |||||||| | |  ||||||| || |||||||||| ||||||||||| |||     
T  27718472 gaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 27718571  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaactg 188  Q
      ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  27718572 tgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaactg 27718636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 27698582 - 27698749
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| |||||||||| ||||||||||||||| ||||||||||| || |||||||| | |  ||||||| || |||||||||| |||||||||||    
T  27698582 atgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaag 27698681  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     |||   ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  27698682 atcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaac 27698749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 26802536 - 26802374
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||| | |  ||||||| || |||||||||| ||||||||||| |||     
T  26802536 gaagaggcatagttgatagaaaacacaggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctttgaagatcat 26802437  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| |||||||| || |||||||||||| |||||||||||||||||||||| |||||||    
T  26802436 tgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagattgcccgtaaaac 26802374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 27593113 - 27593275
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |   |||||| || |||||||||  |||||||||||  ||     
T  27593113 gaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatttcctctttgaagaccat 27593212  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  27593213 tgtcatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattgccggtgaaac 27593275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 27611095 - 27611257
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| || |||||||| | |  ||||||| || |||||||||| |||||| |||| |||     
T  27611095 gaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctcttggaagatcat 27611194  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  27611195 tgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaac 27611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 27724942 - 27725100
Alignment:
Q  28 aggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatc 127  Q
    |||||||||||| ||||||||||||||| ||||||||||| || |||||||| | |  ||||||| || |||||||||| ||||||||||| |||   ||    
T  27724942 aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtc 27725041  T
Q  128 atccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  27725042 atcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaac 27725100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 28781233 - 28781071
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||| ||||| ||||| | |  ||||||| || |||||||||| ||||||||||| |||     
T  28781233 gaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 28781134  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  28781133 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaac 28781071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 27679045 - 27678878
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |   |||||| || |||||||||| |||||||||||    
T  27679045 atgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatctcctctttgaag 27678946  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||   | ||| ||||||||||  |||||||||||||||||||||||||||||||| ||||| ||||    
T  27678945 accattcttatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattcccggtgaaac 27678878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 27706490 - 27706649
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | |   |||||| || |||||||||||| |||||||||    
T  27706490 atgaagaagaggcataggtgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatcccttctttgaag 27706589  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgcc 178  Q
    |||| |||  || ||||||||||| ||||||||||||  || ||||||||||||||||||    
T  27706590 ttcatgattgtcaatgaaggtgtggattcccttgtcatcaaaagccttgtagagattgcc 27706649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 27604798 - 27604960
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    ||||||||||| |||| ||||||||||||||| |||||||| || || |||||||| | |   |||| | || |||||||||| |||||| |||| |||     
T  27604798 gaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctcctcttcgaagatcat 27604897  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27604898 tttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 27604960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 28786363 - 28786210
Alignment:
Q  33 tagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatcatcca 132  Q
    ||||||| ||||||||||||||| ||||||||||| ||||| ||||| | |  ||||||| || |||||||||| ||||||||||| |||   ||||| |    
T  28786363 tagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaa 28786264  T
Q  133 tgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||||||| |  |||||||||||||||||||||||||||||||| ||||||||||    
T  28786263 tgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaac 28786210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 28792484 - 28792331
Alignment:
Q  33 tagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatcatcca 132  Q
    ||||||| ||||||||||||||| ||||||||||| ||||| ||||| | |  ||||||| || |||||||||| ||||||||||| |||   ||||| |    
T  28792484 tagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaa 28792385  T
Q  133 tgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||||||| |  |||||||||||||||||||||||||||||||| ||||||||||    
T  28792384 tgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaac 28792331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 27229331 - 27229164
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||||| ||| || |||||||| | | |||||||| || ||||||| || |||||||||||    
T  27229331 atgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgatttcgtctcctctttgaag 27229232  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     |||   ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  27229231 atcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagattgccggtaaaac 27229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 27531285 - 27531452
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||  ||||||| || ||||| ||||||||||| | |||||||||||  |  |||||| || |||||||||| |||||||||||    
T  27531285 atgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcattttttagtgatggtgtgatttcatctcctctttgaag 27531384  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     |||   ||||| |||||||| |  |||||||||||||||||||||||||||||||| ||||||||||    
T  27531385 atcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagatttccggtaaaac 27531452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 25579818 - 25579652
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||||||||| ||||||||||| | | | |||||| || |||||||||| |||||||||||    
T  25579818 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctcctctttgaag 25579719  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaa 185  Q
     |||  |||||| | ||||||  ||||||||||||||  ||||||||| |||||||| |||||||||    
T  25579718 atcattatcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagattaccggtaaaa 25579652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 27338153 - 27338320
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||  ||||||| |  ||||| ||||||||||||||||||||||| | | | |||||| || || ||||||| ||||||| |||    
T  27338153 atgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgtgctttcatctcctctttcaag 27338252  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     ||    ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||||||    
T  27338253 atcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaac 27338320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 27398893 - 27399060
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||  ||||||| |  ||||| ||||||||||||||||||||||| | | | |||||| || || ||||||| ||||||| |||    
T  27398893 atgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgtgctttcatctcctctttcaag 27398992  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     ||    ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||||||    
T  27398993 atcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaac 27399060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 26142964 - 26142799
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||||||||| ||||||||||| | | | |||||| || |||||||||| ||||||| |||    
T  26142964 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctcctctttcaag 26142865  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaa 184  Q
     |||  |||||| ||||| ||  ||||||||||||||  ||||||||| |||||||| ||||||||    
T  26142864 atcattatcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaa 26142799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 26656088 - 26655921
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| |||||||| || ||||||||||| |   |||||||| || |||||||||| |||||  ||||    
T  26656088 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctctgagaag 26655989  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     |||   ||||| ||||| || || |||||||| ||| ||||||||||||||||||||||||||||||    
T  26655988 atcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaac 26655921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 26762059 - 26761892
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| |||||||| || ||||||||||| |   |||||||| || |||||||||| |||||  ||||    
T  26762059 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctctgagaag 26761960  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     |||   ||||| ||||| || || |||||||| ||| ||||||||||||||||||||||||||||||    
T  26761959 atcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaac 26761892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 25481841 - 25481675
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  |||||  |||||||||| ||||||||||| | | | |||||| || |||||||||| |||||||||||    
T  25481841 atgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctcctctttgaag 25481742  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaa 185  Q
     |||   ||||| ||||| ||  ||||||||||||||  ||||||||| |||||||| |||||||||    
T  25481741 atcattttcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaaa 25481675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 28234663 - 28234496
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||| |||| ||| || |||||||||||||||||||||||||||||||| | |   |||||| || | |||||||| |||| ||||||    
T  28234663 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctcctccttgaag 28234564  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     || |  ||||| ||||||||||| |||||||||| |  ||||||  | ||||||||  |||||||||    
T  28234563 ctccctgtcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaac 28234496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 26056025 - 26055859
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||||| ||| ||||| ||||| | | | ||||||  | |||||||||| |||||||||||    
T  26056025 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatgatgtgatttcatctcctctttgaag 26055926  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaa 185  Q
     |||   ||||| ||||| || | |||||||||||||  ||||||||| |||||||| |||||||||    
T  26055925 atcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaa 26055859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 26075995 - 26075829
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||||| ||| ||||| ||||| | | | ||||||  | |||||||||| |||||||||||    
T  26075995 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatgatgtgatttcatctcctctttgaag 26075896  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaa 185  Q
     |||   ||||| ||||| || | |||||||||||||  ||||||||| |||||||| |||||||||    
T  26075895 atcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaa 26075829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 25538639 - 25538474
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||| ||||| ||||| ||||| | | | |||||| || |||||||||| ||||||| |||    
T  25538639 atgaagaagatgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggccttgacaagtgatggtgtgatttcatctcctctttcaag 25538540  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaa 184  Q
     |||  |||||| ||||| ||   |||||||||||||  ||||||||| |||||||| ||||||||    
T  25538539 atcattatcatctatgaaagtactaattcccttgtcaacaagagccttatagagattaccggtaaa 25538474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 26884262 - 26884106
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| |||||||||  |||||| |  ||||| ||||| ||||| ||||||||||| | |  ||||||| || |||||||    |||||| ||||    
T  26884262 atgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttcgcttcctcttggaag 26884163  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagatt 175  Q
     | |  |||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  26884162 atgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 26884106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 29826048 - 29825959
Alignment:
Q  97 tgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||||||| |||||||||||||| ||    ||||| ||||||||| |||||  ||||||||| ||||| ||||||||||||||||||||||    
T  29826048 tgatttcgtcccctctttgaagctctttgtcatcaatgaaggtgcgaattttcttgtcagttagagctttgtagagattgccggtaaaac 29825959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 28139635 - 28139580
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggc 79  Q
    ||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||    
T  28139635 gaagaggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggc 28139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 28242903 - 28242736
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||| |||| ||| || |||||||||||||||||||||||||||||||| | |   |||||| || | ||||  || |||| | ||||    
T  28242903 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttattttgtcacctcctggaag 28242804  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||| |  ||||| ||||||||| |||||||||| | |  |||| | ||||||||||| || |||||||    
T  28242803 ttctctgtcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaac 28242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 26048944 - 26048778
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||||||||| ||||| ||||| | | | |||    || |||||||||| ||||||| |||    
T  26048944 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgggtgtgatttcatctcctctttcaag 26048845  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaa 185  Q
     |||  |||||| ||||| ||   ||||||||||||| | |||||||| |||||||| |||||||||    
T  26048844 atcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaa 26048778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 26070113 - 26069947
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||||||| ||||||| |  ||||| ||||||||||| ||||| ||||| | | | |||    || |||||||||| ||||||| |||    
T  26070113 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgggtgtgatttcatctcctctttcaag 26070014  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaa 185  Q
     |||  |||||| ||||| ||   ||||||||||||| | |||||||| |||||||| |||||||||    
T  26070013 atcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaa 26069947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 25507002 - 25507146
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||||||||||||||| |||||  || ||||| ||||||||||| |||||||||||   | ||| |||| || |||||||||| |||||||  || ||||    
T  25507002 gaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtgtgatttcatctcctcttttcagatcac 25507101  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
     |||||| |      |||||||||||||||||   |||||| |||||||||    
T  25507102 aatcatcaa------tgtgaattcccttgtcatatagagccgtgtagagat 25507146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 28181213 - 28181153
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggc 79  Q
    |||| ||||| ||||| |||| ||| || || |||||||||||||||||||||||||||||    
T  28181213 atgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggc 28181153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 28185465 - 28185405
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggc 79  Q
    |||| ||||| ||||| |||| ||| || || |||||||||||||||||||||||||||||    
T  28185465 atgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggc 28185405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 28227049 - 28226917
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||| |||| ||| || |||||||||||||||||||| ||||||||| | | |   ||||||  | | |||||||| |||| ||||||    
T  28227049 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatgatgttatttcatcacctccttgaag 28226950  T
Q  119 ttcacgatcatccatgaaggtgtgaattccctt 151  Q
     || | |||||| | ||| ||||||||||||||    
T  28226949 ctctctatcatcaaagaatgtgtgaattccctt 28226917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 28325575 - 28325520
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggc 79  Q
    ||||| ||||| |||| ||| || | ||||||||||||||||||||||||||||||    
T  28325575 gaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggc 28325520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 29467859 - 29467797
Alignment:
Q  86 gagtgatcgtttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcc 148  Q
    ||||||| || ||||||| || ||| ||||||||||   ||||||||||||||||||||||||    
T  29467859 gagtgatggtgtgatttcttcgcctttttgaagttcttcatcatccatgaaggtgtgaattcc 29467797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 27427814 - 27427858
Alignment:
Q  142 gaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  27427814 gaattcccttgtcaataagagccttcaagagattgccggtgaaac 27427858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 27665312 - 27665372
Alignment:
Q  126 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||||| ||||||||||| ||||| ||||||| ||||||||| ||||| || ||||| ||||    
T  27665312 tcatcaatgaaggtgtggattcctttgtcagaaagagccttatagaggttaccggtgaaac 27665372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 268432 - 268587
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  268432 atgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctctttgaag 268531  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  268532 ttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 28164437 - 28164572
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| ||| ||||||||||| ||||| | ||| | ||||||||| | |  || |||  || ||||||| || ||||| | |||    
T  28164437 atgaagaagaggcatagttgatagataacacaggaataaaaattcaagatttttcaatggccttgatgaatgacggtgtgatttcttctcctctctcaag 28164536  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtc 154  Q
     |||| |||||| ||||| |||||||||||||||||    
T  28164537 atcacaatcatcaatgaatgtgtgaattcccttgtc 28164572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 28127754 - 28127814
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggc 79  Q
    |||| |||||||||||||||  |||||| |||||||| ||||| ||||| |||||||||||    
T  28127754 atgaagaagaggcatagttggtagaaaatacaggaataaaaattctagattcttcaatggc 28127814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 3e-59; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 18724160 - 18724315
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  18724160 atgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctctttgcag 18724259  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
     ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  18724260 gtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 18724315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 18679642 - 18679797
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  18679642 atgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctctttgcag 18679741  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
     ||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  18679742 gtcacggtcatcaatgaaggtgtggattcctttgtcagtaagagccttgtagagat 18679797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 18699475 - 18699642
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||    
T  18699475 atgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatccccactttgcag 18699574  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     ||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||    
T  18699575 gtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatggccagtaaaac 18699642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 18731579 - 18731746
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  18731579 atgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctctttgcag 18731678  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     ||||| ||||| ||||||||||| ||||||||||||||||||||  ||||||||| ||| |||||||    
T  18731679 gtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctctgtagagatggccagtaaaac 18731746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 18655552 - 18655707
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||| |||||||||| |||||||||||||||| ||||| ||    
T  18655552 atgaagaagaggcatagttgatagaaaacacaggaataaagatcctagactcttgaatggcattgtcgagtgatggtttgatttcatccccactttgcag 18655651  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
     ||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  18655652 ctcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagat 18655707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 17989248 - 17989292
Alignment:
Q  142 gaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  17989248 gaattcccttgtcaataagagccttcaagagattgccggtgaaac 17989292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 18073741 - 18073697
Alignment:
Q  142 gaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  18073741 gaattcccttgtcaataagagccttcaagagattgccggtgaaac 18073697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 8e-57; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 29273858 - 29274013
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||    
T  29273858 atgaagaagaggcatagttgatagaaaacacaggaataaaaattctagactcttcaatgacattgtcgagtgatgatttgatttcatcccctctttgaag 29273957  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagat 174  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  29273958 ttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagtcttgtagagat 29274013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 31903910 - 31903783
Alignment:
Q  59 aatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagta 158  Q
    |||||||||||||||||| || ||    |||||| || |||||||||  ||||||||||||||   ||| || || |||||||| |||||||| |||  |    
T  31903910 aatcctagactcttcaattgcctctaaaagtgatggtgtgatttcatgtcctctttgaagttcttcatcgtcaataaaggtgtggattcccttatcataa 31903811  T
Q  159 agagccttgtagagattgccggtaaaac 186  Q
    ||||| ||||||||||| || |||||||    
T  31903810 agagctttgtagagatttccagtaaaac 31903783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 14452 - 14610
Alignment:
Q  28 aggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatc 127  Q
    |||||||||||| ||||||||||||||| ||||||||||| || |||||||| | |  ||||||| || |||||||||| ||||||||||| |||   ||    
T  14452 aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtc 14551  T
Q  128 atccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  14552 atcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaac 14610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 3509 - 3677
Alignment:
Q  19 atgacgaagaggcatag-ttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaa 117  Q
    |||| |||||||||||| |||| ||||||||||||||| ||||||||||| || |||||||| | |  ||||||| || |||||||||| ||||||||||    
T  3509 atgaagaagaggcataggttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaa 3608  T
Q  118 gttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    | |||   ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  3609 gatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaac 3677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 10 - 172
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||| ||| ||||||| ||||||||||||||| ||||||||||| ||||| ||||| | |  ||||||| || |||||||||| ||||||||||| |||     
T  10 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 109  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  110 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaac 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 7619 - 7457
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||| ||| ||||||| ||||||||||||||| ||||||||||| ||||| ||||| | |  ||||||| || |||||||||| ||||||||||| |||     
T  7619 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 7520  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  7519 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaac 7457  T

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Target: scaffold0277 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 13725 - 13887
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcac 123  Q
    |||| ||| ||||||| ||||||||||||||| ||||||||||| ||||| ||||| | |  ||||||| || |||||||||| ||||||||||| |||     
T  13725 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 13824  T
Q  124 gatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
      ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  13825 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaac 13887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 4768 - 4926
Alignment:
Q  28 aggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaagttcacgatc 127  Q
    ||||||||  || ||||||||||||||| ||||||||||| || |||||||| | |  ||| ||| || |||||||||| ||||||||||| |||   ||    
T  4768 aggcatagaagatagaaaacacaggaataaaaatcctagattcatcaatggccttgcggagggatggtgtgatttcatctcctctttgaagatcattgtc 4867  T
Q  128 atccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||| |||||||| |  |||||||||||||||||||||||||||||||| ||||||||||    
T  4868 atcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaac 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 1e-18; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 34824 - 34657
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||| |||| ||| || |||||||||||||||||||||||||||||||| | |   |||||| || | |||||||| |||| ||||||    
T  34824 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctcctccttgaag 34725  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     || |  ||||| ||||||||||| |||||||||| |  ||||||  | ||||||||  |||||||||    
T  34724 ctccctgtcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaac 34657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 43065 - 42898
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||| |||| ||| || |||||||||||||||||||||||||||||||| | |   |||||| || | ||||  || |||| | ||||    
T  43065 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttattttgtcacctcctggaag 42966  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    ||| |  ||||| ||||||||| |||||||||| | |  |||| | ||||||||||| || |||||||    
T  42965 ttctctgtcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaac 42898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 27547 - 27415
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| ||||| |||| ||| || |||||||||||||||||||| ||||||||| | | |   ||||||  | | |||||||| |||| ||||||    
T  27547 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatgatgttatttcatcacctccttgaag 27448  T
Q  119 ttcacgatcatccatgaaggtgtgaattccctt 151  Q
     || | |||||| | ||| ||||||||||||||    
T  27447 ctctctatcatcaaagaatgtgtgaattccctt 27415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 116890 - 116835
Alignment:
Q  24 gaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggc 79  Q
    ||||| ||||| |||| ||| || | ||||||||||||||||||||||||||||||    
T  116890 gaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggc 116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 58370 - 58537
Alignment:
Q  19 atgacgaagaggcatagttgacagaaaacacaggaatgaaaatcctagactcttcaatggcatcgtcgagtgatcgtttgatttcatcccctctttgaag 118  Q
    |||| ||||| |||||||||| ||| || || |||||||||||||||||||||| |||||| | |   |||||| || | ||||| || |||| ||||||    
T  58370 atgaagaagaagcatagttgatagacaagacgggaatgaaaatcctagactctttaatggccttgaaaagtgatggtgttatttcgtcacctccttgaag 58469  T
Q  119 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
     || |  ||||||||||||||  | ||||||||||||  ||||||  |||||||||| || |||||||    
T  58470 ctctctgtcatccatgaaggttcggattcccttgtcacaaagagctctgtagagatttccagtaaaac 58537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 17993850 - 17993939
Alignment:
Q  97 tgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    |||||||||| ||||| ||||| ||    ||||| ||||||||  ||||||||||||||| |||||| || |||||||| ||||| ||||    
T  17993850 tgatttcatcacctctctgaagctctttgtcatcgatgaaggttcgaattcccttgtcagaaagagctttatagagattaccggtgaaac 17993939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 59549 - 59505
Alignment:
Q  142 gaattcccttgtcagtaagagccttgtagagattgccggtaaaac 186  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  59549 gaattcccttgtcaataagagccttcaagagattgccggtgaaac 59505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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