View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1717_high_1 (Length: 590)

Name: NF1717_high_1
Description: NF1717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1717_high_1
NF1717_high_1
[»] chr4 (51 HSPs)
chr4 (111-319)||(4386077-4386285)
chr4 (184-319)||(48361066-48361201)
chr4 (181-320)||(36132633-36132772)
chr4 (181-323)||(44111740-44111882)
chr4 (184-321)||(25477542-25477679)
chr4 (184-320)||(30191910-30192046)
chr4 (181-320)||(50121448-50121587)
chr4 (184-320)||(48195904-48196040)
chr4 (184-304)||(41116576-41116695)
chr4 (184-320)||(8347659-8347795)
chr4 (181-321)||(3162906-3163046)
chr4 (203-321)||(17284732-17284850)
chr4 (184-321)||(16412248-16412385)
chr4 (207-316)||(35429775-35429884)
chr4 (168-305)||(21554122-21554258)
chr4 (184-308)||(43117862-43117988)
chr4 (184-315)||(53658367-53658498)
chr4 (184-260)||(42169101-42169177)
chr4 (184-304)||(44061402-44061521)
chr4 (173-260)||(23226953-23227040)
chr4 (20-64)||(4385986-4386030)
chr4 (184-260)||(9894639-9894715)
chr4 (216-319)||(9044386-9044489)
chr4 (184-307)||(42670778-42670901)
chr4 (184-319)||(47866050-47866184)
chr4 (205-319)||(45096609-45096723)
chr4 (184-305)||(45828428-45828549)
chr4 (184-281)||(53225681-53225778)
chr4 (184-260)||(26066383-26066459)
chr4 (185-260)||(14859720-14859795)
chr4 (186-257)||(28020538-28020609)
chr4 (184-319)||(31977743-31977880)
chr4 (254-320)||(37991484-37991550)
chr4 (184-309)||(33010688-33010813)
chr4 (184-321)||(42804270-42804406)
chr4 (184-320)||(3043806-3043941)
chr4 (184-308)||(20459251-20459374)
chr4 (184-316)||(43020770-43020901)
chr4 (184-260)||(55190725-55190800)
chr4 (184-321)||(20745329-20745465)
chr4 (184-232)||(19150672-19150720)
chr4 (169-304)||(32714283-32714418)
chr4 (181-257)||(46434110-46434186)
chr4 (184-320)||(47943741-47943877)
chr4 (187-234)||(31853151-31853198)
chr4 (187-234)||(52966412-52966459)
chr4 (240-317)||(19150793-19150870)
chr4 (169-234)||(52535950-52536015)
chr4 (180-236)||(23042606-23042662)
chr4 (212-260)||(30206526-30206574)
chr4 (169-233)||(36132634-36132698)
[»] chr7 (50 HSPs)
chr7 (169-320)||(28677315-28677466)
chr7 (184-320)||(36245374-36245510)
chr7 (184-321)||(11668012-11668149)
chr7 (170-321)||(10462377-10462527)
chr7 (184-281)||(30869223-30869320)
chr7 (184-300)||(8566099-8566215)
chr7 (187-319)||(45533247-45533379)
chr7 (186-320)||(45441434-45441568)
chr7 (169-304)||(9979815-9979949)
chr7 (185-281)||(2610202-2610298)
chr7 (188-260)||(34117997-34118069)
chr7 (181-313)||(48082810-48082941)
chr7 (184-320)||(10007572-10007710)
chr7 (184-304)||(6838391-6838509)
chr7 (188-308)||(29365631-29365751)
chr7 (184-257)||(4925905-4925978)
chr7 (184-304)||(30823723-30823843)
chr7 (181-308)||(39153297-39153422)
chr7 (169-257)||(44682565-44682653)
chr7 (181-321)||(13807253-13807389)
chr7 (181-320)||(41850607-41850746)
chr7 (184-313)||(2523775-2523904)
chr7 (175-320)||(4826767-4826911)
chr7 (194-319)||(24163294-24163418)
chr7 (184-321)||(27231831-27231967)
chr7 (184-307)||(2680869-2680993)
chr7 (175-304)||(2399966-2400096)
chr7 (184-234)||(41863665-41863715)
chr7 (199-327)||(7456410-7456538)
chr7 (184-320)||(32811376-32811511)
chr7 (181-320)||(31227504-31227642)
chr7 (185-260)||(32811767-32811842)
chr7 (181-314)||(1366599-1366731)
chr7 (188-281)||(40142810-40142903)
chr7 (205-302)||(48838347-48838444)
chr7 (169-233)||(23870978-23871042)
chr7 (181-317)||(28020002-28020136)
chr7 (184-260)||(39153301-39153377)
chr7 (184-243)||(43174299-43174358)
chr7 (171-233)||(2399953-2400015)
chr7 (188-234)||(19512749-19512795)
chr7 (181-219)||(45533329-45533367)
chr7 (184-314)||(47942841-47942971)
chr7 (184-314)||(47948271-47948401)
chr7 (169-262)||(3411388-3411481)
chr7 (180-233)||(6838460-6838513)
chr7 (184-273)||(26563966-26564055)
chr7 (181-233)||(16861523-16861575)
chr7 (181-233)||(30486665-30486717)
chr7 (184-260)||(45981022-45981097)
[»] chr1 (47 HSPs)
chr1 (169-308)||(34332475-34332614)
chr1 (184-319)||(519832-519967)
chr1 (184-314)||(49944847-49944977)
chr1 (184-321)||(38040273-38040410)
chr1 (169-309)||(640521-640660)
chr1 (181-320)||(26070835-26070974)
chr1 (184-307)||(38737942-38738065)
chr1 (184-314)||(44939070-44939200)
chr1 (184-320)||(26924227-26924363)
chr1 (190-307)||(15342957-15343074)
chr1 (184-308)||(47912827-47912948)
chr1 (184-281)||(50155335-50155432)
chr1 (184-256)||(23923564-23923636)
chr1 (184-308)||(26760183-26760307)
chr1 (184-258)||(7375529-7375603)
chr1 (208-320)||(37178948-37179060)
chr1 (205-320)||(5891724-5891839)
chr1 (184-303)||(37515105-37515224)
chr1 (181-308)||(11386165-11386292)
chr1 (184-319)||(24305664-24305799)
chr1 (184-260)||(38590124-38590202)
chr1 (187-319)||(18744576-18744704)
chr1 (184-246)||(23923408-23923470)
chr1 (183-272)||(47883976-47884065)
chr1 (184-313)||(29256606-29256732)
chr1 (205-298)||(6661549-6661642)
chr1 (184-321)||(34662696-34662832)
chr1 (184-319)||(43929345-43929479)
chr1 (184-319)||(47678255-47678389)
chr1 (186-304)||(2855099-2855217)
chr1 (180-233)||(39748629-39748682)
chr1 (169-234)||(45848938-45849003)
chr1 (181-257)||(27819373-27819449)
chr1 (184-232)||(33018255-33018303)
chr1 (181-232)||(6793605-6793656)
chr1 (184-262)||(47946015-47946093)
chr1 (203-260)||(10015144-10015201)
chr1 (203-260)||(20273174-20273231)
chr1 (184-233)||(25021245-25021294)
chr1 (184-233)||(26760187-26760236)
chr1 (184-281)||(26823151-26823248)
chr1 (184-233)||(26924298-26924347)
chr1 (184-233)||(28359007-28359056)
chr1 (240-304)||(15286023-15286087)
chr1 (187-275)||(15699481-15699569)
chr1 (184-260)||(34146862-34146938)
chr1 (184-232)||(47844548-47844596)
[»] chr3 (46 HSPs)
chr3 (184-304)||(35099069-35099189)
chr3 (169-308)||(44518035-44518174)
chr3 (184-319)||(54537457-54537592)
chr3 (184-304)||(23222972-23223091)
chr3 (169-320)||(45010748-45010899)
chr3 (184-320)||(43448972-43449108)
chr3 (184-319)||(21662900-21663035)
chr3 (184-320)||(53441905-53442041)
chr3 (169-319)||(52864950-52865100)
chr3 (186-319)||(12064908-12065041)
chr3 (205-304)||(25954036-25954135)
chr3 (169-298)||(12747717-12747846)
chr3 (184-320)||(51723392-51723528)
chr3 (198-320)||(8266261-8266381)
chr3 (187-321)||(25910188-25910322)
chr3 (184-281)||(53357325-53357423)
chr3 (184-321)||(29457837-29457973)
chr3 (184-320)||(51516972-51517107)
chr3 (181-272)||(40460356-40460448)
chr3 (184-307)||(33808321-33808443)
chr3 (201-320)||(48593173-48593292)
chr3 (174-306)||(43343445-43343582)
chr3 (184-260)||(19649637-19649713)
chr3 (175-321)||(33371866-33372011)
chr3 (184-260)||(28406525-28406601)
chr3 (184-260)||(49885393-49885468)
chr3 (212-319)||(13622486-13622593)
chr3 (169-260)||(40198394-40198485)
chr3 (175-260)||(7136814-7136899)
chr3 (180-225)||(23920634-23920679)
chr3 (203-260)||(32711260-32711317)
chr3 (184-317)||(36985170-36985303)
chr3 (184-317)||(37010609-37010742)
chr3 (186-259)||(47505231-47505304)
chr3 (200-248)||(43014485-43014533)
chr3 (186-281)||(29290794-29290889)
chr3 (181-312)||(40198401-40198532)
chr3 (184-262)||(9190084-9190162)
chr3 (172-257)||(9236088-9236174)
chr3 (185-247)||(16295401-16295463)
chr3 (183-233)||(19649592-19649642)
chr3 (240-305)||(9197094-9197159)
chr3 (169-262)||(23825205-23825298)
chr3 (181-234)||(44593212-44593265)
chr3 (184-232)||(5177851-5177899)
chr3 (287-319)||(34988173-34988205)
[»] chr8 (37 HSPs)
chr8 (184-319)||(40483282-40483417)
chr8 (169-319)||(3236331-3236479)
chr8 (184-307)||(5031478-5031601)
chr8 (194-320)||(42122964-42123090)
chr8 (185-320)||(16448787-16448922)
chr8 (184-320)||(7693031-7693167)
chr8 (184-308)||(35149678-35149802)
chr8 (175-321)||(10839768-10839913)
chr8 (188-305)||(16008536-16008653)
chr8 (184-320)||(8793733-8793869)
chr8 (184-320)||(15726758-15726893)
chr8 (184-319)||(43332574-43332710)
chr8 (184-281)||(1223137-1223234)
chr8 (174-318)||(8453595-8453738)
chr8 (184-320)||(8803242-8803378)
chr8 (175-313)||(10184555-10184694)
chr8 (176-320)||(34711087-34711230)
chr8 (167-319)||(24618957-24619108)
chr8 (168-257)||(4156378-4156468)
chr8 (184-320)||(44796356-44796491)
chr8 (184-320)||(12958790-12958925)
chr8 (184-319)||(6899434-6899568)
chr8 (169-260)||(8793777-8793868)
chr8 (181-232)||(32597584-32597635)
chr8 (184-319)||(36366024-36366158)
chr8 (181-319)||(42786375-42786511)
chr8 (184-321)||(22429549-22429685)
chr8 (184-321)||(24177986-24178122)
chr8 (228-305)||(24821904-24821981)
chr8 (178-257)||(883679-883758)
chr8 (168-233)||(13831445-13831511)
chr8 (184-233)||(3236415-3236464)
chr8 (212-320)||(28872158-28872267)
chr8 (184-326)||(35011226-35011369)
chr8 (176-304)||(6354662-6354789)
chr8 (169-233)||(7693032-7693096)
chr8 (220-260)||(30255783-30255823)
[»] chr2 (54 HSPs)
chr2 (185-308)||(32457223-32457346)
chr2 (184-319)||(30761392-30761527)
chr2 (184-319)||(38982998-38983133)
chr2 (171-304)||(33824351-33824484)
chr2 (184-308)||(30758730-30758853)
chr2 (165-305)||(42698077-42698217)
chr2 (184-307)||(10204941-10205063)
chr2 (180-321)||(29988902-29989043)
chr2 (184-307)||(35728475-35728599)
chr2 (184-319)||(20555272-20555406)
chr2 (183-305)||(29169848-29169970)
chr2 (181-319)||(12962716-12962854)
chr2 (188-305)||(39445013-39445130)
chr2 (184-321)||(43713971-43714107)
chr2 (184-319)||(7943438-7943574)
chr2 (169-301)||(41153128-41153260)
chr2 (181-320)||(9152377-9152516)
chr2 (199-304)||(39118043-39118148)
chr2 (184-307)||(4410788-4410912)
chr2 (184-308)||(38554468-38554592)
chr2 (169-304)||(5109362-5109497)
chr2 (184-307)||(11030203-11030326)
chr2 (184-305)||(28248946-28249067)
chr2 (184-308)||(34447514-34447637)
chr2 (184-321)||(45571044-45571180)
chr2 (184-321)||(45574711-45574847)
chr2 (184-321)||(45578378-45578514)
chr2 (184-321)||(45582045-45582181)
chr2 (184-321)||(45585712-45585848)
chr2 (184-321)||(45589379-45589515)
chr2 (184-321)||(45593046-45593182)
chr2 (184-321)||(45596713-45596849)
chr2 (184-321)||(45600380-45600516)
chr2 (184-321)||(45604047-45604183)
chr2 (184-321)||(45607714-45607850)
chr2 (184-321)||(45611381-45611517)
chr2 (184-321)||(45615048-45615184)
chr2 (184-232)||(5559377-5559425)
chr2 (169-304)||(12873722-12873857)
chr2 (184-321)||(3838415-3838551)
chr2 (184-320)||(36881547-36881677)
chr2 (185-320)||(33273968-33274103)
chr2 (184-319)||(45034412-45034546)
chr2 (194-307)||(28014297-28014410)
chr2 (184-320)||(4063286-4063421)
chr2 (223-305)||(28494757-28494839)
chr2 (215-300)||(3837428-3837513)
chr2 (212-307)||(2936335-2936430)
chr2 (169-232)||(21424988-21425051)
chr2 (188-262)||(3037741-3037817)
chr2 (184-233)||(12486077-12486126)
chr2 (169-262)||(22857803-22857896)
chr2 (200-281)||(37670348-37670429)
chr2 (243-308)||(43893962-43894027)
[»] chr5 (40 HSPs)
chr5 (183-320)||(22101921-22102058)
chr5 (175-308)||(18473480-18473613)
chr5 (168-320)||(21488281-21488433)
chr5 (184-320)||(29299371-29299508)
chr5 (184-316)||(5002142-5002274)
chr5 (184-319)||(11931983-11932119)
chr5 (334-451)||(33866825-33866944)
chr5 (194-320)||(33478131-33478257)
chr5 (181-313)||(16619028-16619161)
chr5 (199-316)||(36286061-36286178)
chr5 (162-319)||(34297173-34297333)
chr5 (184-257)||(18718252-18718325)
chr5 (184-320)||(13789730-13789866)
chr5 (169-321)||(38394427-38394579)
chr5 (183-257)||(36434739-36434813)
chr5 (168-313)||(1138223-1138367)
chr5 (194-260)||(14723410-14723476)
chr5 (206-319)||(919641-919754)
chr5 (184-260)||(14913164-14913240)
chr5 (200-259)||(32452287-32452346)
chr5 (181-308)||(32902778-32902905)
chr5 (184-241)||(8511460-8511517)
chr5 (184-321)||(15968325-15968461)
chr5 (181-281)||(3814008-3814108)
chr5 (181-320)||(26327546-26327685)
chr5 (184-320)||(29031035-29031170)
chr5 (184-319)||(22731258-22731392)
chr5 (224-321)||(1248883-1248981)
chr5 (184-321)||(13664943-13665073)
chr5 (184-321)||(27488361-27488497)
chr5 (185-234)||(35349497-35349546)
chr5 (194-319)||(10228087-10228216)
chr5 (448-480)||(33866497-33866529)
chr5 (183-320)||(8235382-8235512)
chr5 (187-234)||(19211297-19211344)
chr5 (181-232)||(34297185-34297236)
chr5 (185-226)||(6604414-6604455)
chr5 (165-234)||(10228151-10228220)
chr5 (184-257)||(38362393-38362466)
chr5 (206-262)||(1420713-1420769)
[»] chr6 (29 HSPs)
chr6 (184-310)||(28630767-28630893)
chr6 (184-320)||(17265719-17265855)
chr6 (181-305)||(30627834-30627958)
chr6 (184-319)||(8052869-8053005)
chr6 (184-260)||(2230407-2230483)
chr6 (184-320)||(3064897-3065033)
chr6 (187-320)||(28863337-28863470)
chr6 (184-319)||(33119903-33120036)
chr6 (181-281)||(2972175-2972275)
chr6 (208-316)||(9077624-9077732)
chr6 (184-304)||(10283308-10283428)
chr6 (200-319)||(27909004-27909124)
chr6 (184-320)||(30895198-30895334)
chr6 (185-303)||(12450366-12450484)
chr6 (184-260)||(1158303-1158379)
chr6 (184-320)||(2810093-2810228)
chr6 (169-304)||(12999769-12999905)
chr6 (175-251)||(17705929-17706005)
chr6 (184-233)||(27909060-27909109)
chr6 (194-233)||(25538006-25538045)
chr6 (163-233)||(7257415-7257484)
chr6 (183-233)||(8030168-8030218)
chr6 (188-260)||(10753637-10753706)
chr6 (191-308)||(5483871-5483988)
chr6 (184-260)||(5483875-5483951)
chr6 (181-257)||(7649810-7649886)
chr6 (185-233)||(12450436-12450484)
chr6 (180-260)||(13417425-13417505)
chr6 (245-305)||(21162413-21162473)
[»] scaffold0136 (1 HSPs)
scaffold0136 (182-321)||(16541-16680)
[»] scaffold0236 (1 HSPs)
scaffold0236 (184-261)||(16708-16782)
[»] scaffold0123 (1 HSPs)
scaffold0123 (167-304)||(28101-28240)
[»] scaffold0001 (1 HSPs)
scaffold0001 (184-319)||(156767-156902)
[»] scaffold0767 (1 HSPs)
scaffold0767 (181-249)||(3734-3802)
[»] scaffold0028 (1 HSPs)
scaffold0028 (194-307)||(71860-71973)
[»] scaffold0778 (1 HSPs)
scaffold0778 (201-308)||(5282-5388)
[»] scaffold0110 (1 HSPs)
scaffold0110 (181-319)||(1532-1669)
[»] scaffold0086 (1 HSPs)
scaffold0086 (220-260)||(1487-1527)
[»] scaffold0070 (1 HSPs)
scaffold0070 (184-260)||(40159-40235)


Alignment Details
Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 111 - 319
Target Start/End: Original strand, 4386077 - 4386285
Alignment:
Q  111 gaagatctcaatcagcgacaagattagattatcaaaaaccggtaattctaatttaatgtactctctccaatcttatttataagaaaaatttgacttttta 210  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4386077 gaagatctcaatcagcgacaagattagattaccaaaaaccggtaattctaatttaatatactctctccaatcttatttataagaaaaatttgacttttta 4386176  T
Q  211 aattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaataggactg 310  Q
    |||||||| ||||||||||||||  | |||| ||||||||| |||||||| || |||  ||| ||| |||| | | |||| |||||||||||||  ||||    
T  4386177 aattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatcaaaaaagtcaaatttttcttataaataaaactg 4386276  T
Q  311 gagggagta 319  Q
    |||| ||||    
T  4386277 gaggaagta 4386285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 48361066 - 48361201
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  48361066 tatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 48361165  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | |||| ||||||||||||||||| ||||||||||    
T  48361166 gtcaaatgtttcttataaataggacaggagggagta 48361201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 36132772 - 36132633
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| ||||||||| | || ||||||||| |||||||||| ||||| |||||||||| |||||||| || |||||||| ||| |||    
T  36132772 tcttatttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatcaaa 36132673  T
Q  281 acatttaaatatttcttataaataggactggagggagtat 320  Q
    | | | ||||||||||||||||||||||||||||||||||    
T  36132672 aaagtcaaatatttcttataaataggactggagggagtat 36132633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 181 - 323
Target Start/End: Complemental strand, 44111882 - 44111740
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||||||| || |||  ||| ||| |||    
T  44111882 tcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatgtaattaatcaaa 44111783  T
Q  281 acatttaaatatttcttataaataggactggagggagtatagt 323  Q
    | | | |||| ||||||||||||||||| ||||||||||||||    
T  44111782 aaagtcaaatgtttcttataaataggaccggagggagtatagt 44111740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 25477679 - 25477542
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||| || ||| |||| ||| |||| |    
T  25477679 tatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 25477580  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | |||||||| ||||||||||||||||||| ||||||    
T  25477579 gtcaaatattttttataaataggactggaggtagtata 25477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 30191910 - 30192046
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  30191910 tatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 30192009  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     |||||| ||||||||||||| ||| |||||||||||    
T  30192010 gttaaatgtttcttataaatacgaccggagggagtat 30192046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 50121448 - 50121587
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||||||||||||||| ||| ||||| | ||||||||||| ||||||| |||||||||||||| || || ||| |||| |||||||    
T  50121448 tcttatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatgcaatgaattaaa 50121547  T
Q  281 acatttaaatatttcttataaataggactggagggagtat 320  Q
    | | | |||| |||||||||||||||||| ||||||||||    
T  50121548 aaagtcaaatgtttcttataaataggactagagggagtat 50121587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 48195904 - 48196040
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||  | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||| |||| ||  |||| |    
T  48195904 tatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaaccaaaaaa 48196003  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||||||||| ||||| |||||    
T  48196004 gtcaaatgtttcttataaataggaccggaggaagtat 48196040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 41116576 - 41116695
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||| |||||||||||||||||| || |||||||||||| |||| |    
T  41116576 tatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat-atttatacaataaataaaaaaa 41116674  T
Q  284 tttaaatatttcttataaata 304  Q
     | |||  |||||||||||||    
T  41116675 atgaaaagtttcttataaata 41116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 8347659 - 8347795
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||| || |||||||||| ||||||| || |||||||| ||| |||| |    
T  8347659 tatttataagaaaaatttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatgaataaaaaaa 8347758  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||||  ||| ||||| |||||    
T  8347759 gtcaaatgtttcttataaattagaccggaggaagtat 8347795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 3162906 - 3163046
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| || |||| ||||||||||||||||  ||||||| || ||| |||| ||| |||    
T  3162906 tcttatttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttatgcaatgaatcaaa 3163005  T
Q  281 acatttaaatatttcttataaataggactggagggagtata 321  Q
    | | | |||| ||| ||||||||| ||| ||| | ||||||    
T  3163006 aaagtcaaatgttttttataaataagaccggaagaagtata 3163046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 17284850 - 17284732
Alignment:
Q  203 actttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaa 302  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||||||||| |||||| || ||| |||| ||| |||| | | |||||||  |||||||    
T  17284850 actttttaaatttattgtataattgatgtatcttgtctagaatatagaccacatacatcatttatgcaatgaatcaaaaaaatcaaatattcattataaa 17284751  T
Q  303 taggactggagggagtata 321  Q
    |||||| ||||||||||||    
T  17284750 taggaccggagggagtata 17284732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 16412248 - 16412385
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||| |||   |||||||||||||||||||||||| || ||| ||||   | |||  |    
T  16412248 tatttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaatgtgtcaaagaa 16412347  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | |||||||||||||| |||| || ||||||||||||    
T  16412348 gtcaaatatttcttatatatagaaccggagggagtata 16412385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 207 - 316
Target Start/End: Complemental strand, 35429884 - 35429775
Alignment:
Q  207 tttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatagg 306  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||  | ||| |||  ||| |||| | | |||||||||||||||||||     
T  35429884 tttagattaattgagtaattgatgtatcttgtctagaatatagaccaaatacatcttttatgcaacgaataaaaaaagtcaaatatttcttataaataga 35429785  T
Q  307 actggaggga 316  Q
    ||||||||||    
T  35429784 actggaggga 35429775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 305
Target Start/End: Complemental strand, 21554258 - 21554122
Alignment:
Q  168 gtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatg-tctagaatatagaccaaatacataatcta 266  Q
    ||||||| ||||||| ||||||||||||||| |||| |||||| ||||||||||||||| ||||||  || | ||||||||||||||||||||| || ||    
T  21554258 gtactctttccaatcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat--tgatatagaatatagaccaaatacatcattta 21554161  T
Q  267 tacaataaattaaaacatttaaatatttcttataaatag 305  Q
    | |||| |||  ||| | | |||||||| ||||||||||    
T  21554160 tgcaatgaatcgaaaaagtcaaatattttttataaatag 21554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 43117988 - 43117862
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaat--taaaa 281  Q
    ||||||||||||||| |||| |||||| ||||||||| ||||||||||||   || || |||||||||||||||||| || ||| ||||||||   ||||    
T  43117988 tatttataagaaaaaattgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataaatcaaaaaa 43117889  T
Q  282 catttaaatatttcttataaataggac 308  Q
     | ||||||||||| ||||||||||||    
T  43117888 aagttaaatatttcatataaataggac 43117862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 315
Target Start/End: Complemental strand, 53658498 - 53658367
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||| ||||  ||| | ||||||  ||||||||||||||||||||||||| ||  ||||||| ||| |||| |    
T  53658498 tatttataagaaaaagttaattttttagatttattgtataactaatgtattttgtctagaatatagaccaaatacattattcatacaatgaataaaaaaa 53658399  T
Q  284 tttaaatatttcttataaataggactggaggg 315  Q
     |||||||||||||||||||| ||| ||||||    
T  53658398 gttaaatatttcttataaatatgaccggaggg 53658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 42169177 - 42169101
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||||||||||  ||||| |||||| ||||||||||||    
T  42169177 tatttataagaaaaatttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacat 42169101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 44061521 - 44061402
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| | || ||||||||||||||| ||||||  |||||| ||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  44061521 tatttataagaaaaaatcga-tttttaaattcattgtgtaattagtgtatcttgtctagaatatagaccaaatacattatttatgcaatgaatcaaaaaa 44061423  T
Q  284 tttaaatatttcttataaata 304  Q
     | |||  |||||||||||||    
T  44061422 ctcaaacgtttcttataaata 44061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 23226953 - 23227040
Alignment:
Q  173 ctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||| || |||||||||||||||| ||||||||||| |||||||  |||||| ||||||| |||||| || |||||||||||||||    
T  23226953 ctctccgattttatttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctaaaaaatagaccaaatacat 23227040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4385986 - 4386030
Alignment:
Q  20 cttctccatcgttggcctacatcaccatgtcgacgacctcatcgg 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4385986 cttctccatcgttggcctacatcaccatgtcgacgacctcatcgg 4386030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 9894639 - 9894715
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||||| ||||||||||| |||||||  || ||| ||||||| ||||||||||||||| |||||||||    
T  9894639 tatttataagaaaaagttgactttttagattcattatgttattaatgtatcttgtctagaatatagatcaaatacat 9894715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 9044489 - 9044386
Alignment:
Q  216 attgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaataggactggaggg 315  Q
    ||||||||||||||||||  |||||||||||||| ||||| |||| || |||||||| ||| |||| | | ||||||||||||| ||||  |||||| ||    
T  9044489 attgagtaattgatgtattttgtctagaatataggccaaagacatcatttatacaatgaatcaaaaaagtcaaatatttcttatgaataaaactggaagg 9044390  T
Q  316 agta 319  Q
    ||||    
T  9044389 agta 9044386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 42670778 - 42670901
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||  |||||||| |||||| |||||||  || |||||||||||||||||| || || ||| |||| |||  ||| |    
T  42670778 tatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatgaatctaaaaa 42670877  T
Q  284 tttaaatatttcttataaatagga 307  Q
     | |||| ||||||||||||||||    
T  42670878 gtcaaatgtttcttataaatagga 42670901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 47866050 - 47866184
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  47866050 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 47866148  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | || | ||||||||| ||||||| ||||||||||    
T  47866149 gtaaattgtttcttatatataggaccggagggagta 47866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 45096609 - 45096723
Alignment:
Q  205 tttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaata 304  Q
    |||||| ||| ||||| ||||||||||||| |||||||| ||||||||||||| || || ||| |||||||| |||| | | |||| ||| |||||||||    
T  45096609 tttttagatttattgaataattgatgtatcttgtctagattatagaccaaatatatcatttatgcaataaatcaaaaaagtcaaatgttttttataaata 45096708  T
Q  305 ggactggagggagta 319  Q
     ||  ||||||||||    
T  45096709 tgataggagggagta 45096723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 45828549 - 45828428
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| ||||||||||||||| ||||||   ||||| |||||| ||||||||||| || |||  ||  ||| |||| |    
T  45828549 tatttataagaaaaaattgattttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttatgtaaagaatcaaaaaa 45828450  T
Q  284 tttaaatatttcttataaatag 305  Q
     | |||||||| ||||||||||    
T  45828449 atcaaatattttttataaatag 45828428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 53225778 - 53225681
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||| ||||||   || |||||| |||||||||||||| || ||| |||| ||| ||||    
T  53225778 tatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaa 53225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 26066383 - 26066459
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||| | ||||||||  | ||||||||| |||||||||||||  ||||||||||||||||| ||||||    
T  26066383 tatttataagaaataattgactttcaagattcattgaataattgatgtatccggtctagaatatagaccagatacat 26066459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 14859720 - 14859795
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||| ||||||||||  ||||| |||||||||| |||||||||||| |||||| |||||| || ||||||||    
T  14859720 atttataataaaaatttgatattttagattcattgagaaattgatgtatcttgtctacaatatatactaaatacat 14859795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 28020609 - 28020538
Alignment:
Q  186 tttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||||||||||| ||||||||||||||| ||| ||||||| ||||||   || ||||||||||||||||||    
T  28020609 tttataagaaaaagttgactttttaaatttattaagtaattaatgtatttagtatagaatatagaccaaata 28020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 31977880 - 31977743
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattg--atgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||||||||| | | ||||||| ||||||||||||||||  ||||||   || |||||||||||||||||| || || ||| | |  ||| ||||    
T  31977880 tatttataagaaaaaatcggctttttagattcattgagtaattgatatgtatagggtttagaatatagaccaaatatatcatttatgctaggaataaaaa 31977781  T
Q  282 catttaaatatttcttataaataggactggagggagta 319  Q
     | | ||||||||||||||||||| ||  |||||||||    
T  31977780 aaatcaaatatttcttataaatagaaccagagggagta 31977743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 37991550 - 37991484
Alignment:
Q  254 aatacataatctatacaataaattaaaacatttaaatatttcttataaataggactggagggagtat 320  Q
    ||||||| || |||||||| ||| |||| |||||||| |||||||||||||||||| ||||||||||    
T  37991550 aatacatcatttatacaatgaatcaaaaaatttaaatgtttcttataaataggactagagggagtat 37991484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 33010688 - 33010813
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| ||| |||| |||||| || |||  ||| ||||||||| |  |||||||| || |||| || |||| |||| |    
T  33010688 tatttataagaaaaaattgattttttagattaattgtgtaattaatatattttgtttagaatatatattaaatacatcatttataaaaaaaatcaaaaaa 33010787  T
Q  284 tttaaatatttcttataaataggact 309  Q
     ||||| |||||||||||||| ||||    
T  33010788 attaaacatttcttataaataagact 33010813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 42804270 - 42804406
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |   | ||||| ||||||||||||||| | ||||  ||| ||| |||| |    
T  42804270 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatttagaa-atagaccaaatacatcaactatttaatgaatcaaaaaa 42804368  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  42804369 ataaattgtttcttatatataggaccggagggagtata 42804406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 3043806 - 3043941
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | ||||||||||| |  ||||| || ||||||||||||||| | |||| |||| ||| |||| |    
T  3043806 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtcta-aaaatagaccaaatacatcaactattcaatgaatcaaaaaa 3043904  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | || | ||||||||| |||| || |||||||||||    
T  3043905 ataaattgtttcttatatatagaaccggagggagtat 3043941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 20459374 - 20459251
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  20459374 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 20459276  T
Q  284 tttaaatatttcttataaataggac 308  Q
     | || | ||||||||| |||||||    
T  20459275 gtaaattgtttcttatatataggac 20459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 43020770 - 43020901
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |    |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  43020770 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 43020868  T
Q  284 tttaaatatttcttataaataggactggaggga 316  Q
     | || | ||||||||| ||||||| |||||||    
T  43020869 gtaaattgtttcttatatataggaccggaggga 43020901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 55190800 - 55190725
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||||| |||| |||||| ||||||| | |||||||||||||  | |||||| |||||||||||||||    
T  55190800 tatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaa-atagaccaaatacat 55190725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 20745465 - 20745329
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | ||||||||||| |  | |||||| ||||| ||||||||| | |||| |||| ||| |||| |    
T  20745465 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacatcaactattcaatgaatcaaaaaa 20745367  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||| ||||| ||||||| ||||||||||||    
T  20745366 gtaaattgttttttatatataggaccggagggagtata 20745329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 19150672 - 19150720
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||| |||||    
T  19150672 tatttataagaaaaagttgactttttagatttattgagtaattaatgta 19150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 304
Target Start/End: Complemental strand, 32714418 - 32714283
Alignment:
Q  169 tactctctccaatcttatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctat 267  Q
    |||||| ||| ||| ||||||||| |||||  ||||||||| | ||||||| | | ||||||||||  |||||||||||||||| |||||||| || |||    
T  32714418 tactctatccgatcctatttataaaaaaaaaattgactttt-agattcattcaatgattgatgtattttgtctagaatatagactaaatacatcatttat 32714320  T
Q  268 acaataaattaaaacatttaaatatttcttataaata 304  Q
      ||| ||| |||| | | |||| |||||||||||||    
T  32714319 gtaatgaatcaaaaaagtcaaatgtttcttataaata 32714283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 46434110 - 46434186
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    |||||||||||| ||| ||||||||||||| |||| || ||||||| || |||  ||| ||||||||||| ||||||    
T  46434110 tcttatttataaaaaatatttgactttttagattctttaagtaattaatatatattgtttagaatatagatcaaata 46434186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 47943741 - 47943877
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||| |||||| ||||||||||| ||| ||||||||||| |||||    || || ||||||||| |||||||| || ||| |||| ||| ||||      
T  47943741 tatttatatgaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgcaatgaatcaaaaat 47943840  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||  ||||||||| ||| |||||||||||    
T  47943841 gtcaaatgttatttataaataagaccggagggagtat 47943877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 31853198 - 31853151
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||    
T  31853198 ttataagaaaaatttgactttttaggttcattgtgtaagtgatgtatc 31853151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 52966412 - 52966459
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||||||||||||||||||||||| |||||||  ||| |||||||||    
T  52966412 ttataagaaaaatttgactttttaagttcattgtataagtgatgtatc 52966459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 19150793 - 19150870
Alignment:
Q  240 tagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaataggactggagggag 317  Q
    ||||||||||||||||||||| || ||| |||| |||  ||| | | |||| |||||||||||||||||  |||||||    
T  19150793 tagaatatagaccaaatacatcatttatgcaatgaatcgaaaaagtaaaatgtttcttataaataggaccagagggag 19150870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 52535950 - 52536015
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||| |||| ||||||||||||||||||| || |||||||| || |||||| ||||  |||||||    
T  52535950 tactccctccgatcttatttataagaaaaagttaactttttagatacattgaataatgtatgtatc 52536015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 23042606 - 23042662
Alignment:
Q  180 atcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcat 236  Q
    ||||||||||||||||| | |||| | |||||||| ||||| |||| ||||||||||    
T  23042606 atcttatttataagaaacaattgattatttaaatttattgaataatcgatgtatcat 23042662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 30206574 - 30206526
Alignment:
Q  212 attcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||| |||||||||||||  || || ||||||||||||||||||    
T  30206574 attcattgaataattgatgtatctggtttataatatagaccaaatacat 30206526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 36132634 - 36132698
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||| ||||| || ||||||||||||| ||||||||||||  ||||||||  ||| ||||||||    
T  36132634 tactccctccagtcctatttataagaaatatttgacttttttgattcattgtataaatgatgtat 36132698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 28677466 - 28677315
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||| |||| ||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| || |||     
T  28677466 tactccctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatg 28677367  T
Q  269 caataaattaaaacatttaaatatttcttataaataggactggagggagtat 320  Q
    |||| ||| |||| | | |||| ||||||||||||||||| |||||||||||    
T  28677366 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 28677315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 36245510 - 36245374
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  36245510 tatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 36245411  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||| ||||| |||||||||||    
T  36245410 gtcaaatgtttcttataaacaggaccggagggagtat 36245374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 11668149 - 11668012
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||| || || ||| |||| ||| |||| |    
T  11668149 tatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatcaaaaaa 11668050  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | |||| ||||||||||||||||| ||||||||||||    
T  11668049 gtcaaatgtttcttataaataggaccggagggagtata 11668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 170 - 321
Target Start/End: Original strand, 10462377 - 10462527
Alignment:
Q  170 actctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatac 269  Q
    |||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||| |||||| ||||||||||| || ||| |    
T  10462377 actccctccgatcttatttataagaaaaatgtgactttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgc 10462476  T
Q  270 aataaattaaaacatttaaatatttcttataaataggactggagggagtata 321  Q
    ||| || ||||| || | ||| |||||||||||||| |||||||||||||||    
T  10462477 aatgaa-taaaaaatgtcaatgtttcttataaatagaactggagggagtata 10462527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 30869320 - 30869223
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||    
T  30869320 tatttataagaaaattttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatcaaaa 30869223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 8566215 - 8566099
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  8566215 tatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 8566116  T
Q  284 tttaaatatttcttata 300  Q
     |||||| |||||||||    
T  8566115 gttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 187 - 319
Target Start/End: Original strand, 45533247 - 45533379
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacattt 286  Q
    |||||||||||| ||||||||||| |||||||  |||||| ||||||| ||||||||||||||||||||||||| || |||||||| |||||||| | |     
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtc 45533346  T
Q  287 aaatatttcttataaataggactggagggagta 319  Q
    |||| ||||||||||||| ||| ||||| ||||    
T  45533347 aaatgtttcttataaataagacaggaggaagta 45533379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 186 - 320
Target Start/End: Complemental strand, 45441568 - 45441434
Alignment:
Q  186 tttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatt 285  Q
    ||||||| ||||| || |||||||| ||||| ||| |||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| | |    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaaagt 45441469  T
Q  286 taaatatttcttataaataggactggagggagtat 320  Q
     ||||||||| |||||||||||| |||| ||||||    
T  45441468 caaatatttcatataaataggaccggagcgagtat 45441434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 169 - 304
Target Start/End: Complemental strand, 9979949 - 9979815
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||| |||| | ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||||| ||| |||||||| || |||     
T  9979949 tactccctccgaacttatttataagaaaaatttgactttttagatttattgagtaattcatgtatcttgtctagaatattgactaaatacatcatttat- 9979851  T
Q  269 caataaattaaaacatttaaatatttcttataaata 304  Q
     ||||||| |||| | | ||||||||||||||||||    
T  9979850 gaataaatcaaaatagtcaaatatttcttataaata 9979815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 2610202 - 2610298
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||| |||||||| || ||| |||| ||||||||    
T  2610202 atttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatgaattaaaa 2610298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 34118069 - 34117997
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  34118069 tataagaaaaagttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacat 34117997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 313
Target Start/End: Original strand, 48082810 - 48082941
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||| ||||||||||| ||||||||||| ||||||||  || |||  ||| ||| |||    
T  48082810 tcttatttataagaaaaagttgactttttagattcattgtgtaattaatgtatcatgtgtagaatataga-caaatacaccatttatgtaatgaataaaa 48082908  T
Q  281 acatttaaatatttcttataaataggactggag 313  Q
    | | | |||||||| ||||||||||||| ||||    
T  48082909 aaagtcaaatatttattataaataggaccggag 48082941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 10007710 - 10007572
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaat--taaaa 281  Q
    ||||||||||||||| ||||||||||| ||||||||  ||||| ||||||| ||| |||||||||||||||||||||||| |||  ||| |||   ||||    
T  10007710 tatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatgaaatgaataaaaaaa 10007611  T
Q  282 catttaaatatttcttataaataggactggagggagtat 320  Q
     | | |||| ||| ||||||||||||| |||||||||||    
T  10007610 aagtcaaatgtttattataaataggacaggagggagtat 10007572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 6838391 - 6838509
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||||  |||| |  |||||||||||||| ||||||| ||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  6838391 tatttataagaaaaatttggtttttga--ttcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 6838488  T
Q  284 tttaaatatttcttataaata 304  Q
     | |||| |||||||||||||    
T  6838489 gtcaaatgtttcttataaata 6838509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 29365751 - 29365631
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacattta 287  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||   || ||||||||||| ||||||||| || ||| ||||  ||||||| | | |    
T  29365751 tataagaaaaaattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtattaaaaaagtca 29365652  T
Q  288 aatatttcttataaataggac 308  Q
    ||| |||||||||||||||||    
T  29365651 aatgtttcttataaataggac 29365631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 4925905 - 4925978
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||| ||||||||| |||||    
T  4925905 tatttataagaaaaatttgactttttagattcattaagtaattgatgtaacttgtctaaaatatagactaaata 4925978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 30823723 - 30823843
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||| |||||||||||| |||||||||| |||| ||||||   || ||||||||||||||||||||| || |||| ||| ||| ||||      
T  30823723 tatttataagaaaattttgactttttagattcattgagaaattaatgtatttggtatagaatatagaccaaatacattatttatataatgaataaaaaat 30823822  T
Q  284 tttaaatatttcttataaata 304  Q
     | |||||||| |||||||||    
T  30823823 atcaaatattttttataaata 30823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 39153422 - 39153297
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||| ||||  |||||||||||  |||||||||||||||||||||   ||||| ||||||||| |||||||| || ||| |||| ||| |||    
T  39153422 tcttatttataaaaaaa--ttgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaa 39153325  T
Q  281 acatttaaatatttcttataaataggac 308  Q
    | | | |||| |||||||||||||||||    
T  39153324 aaagtcaaatgtttcttataaataggac 39153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 44682565 - 44682653
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||||||||  || ||||||||||||||||||||||||| | ||||||| ||||| ||||||||  |||||||| |||||||||||||    
T  44682565 tactctctccggtcctatttataagaaaaatttgacttttgagattcattaagtaactgatgtattttgtctagattatagaccaaata 44682653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 13807253 - 13807389
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    ||| | | ||||||||||| |||||| || || |||  ||| ||| |||    
T  13807253 tcttatttataagaaaaagttgactttttagattcattgagtaattg----atcttctttagaatatagatcaaatatatcatttatgtaatgaatcaaa 13807348  T
Q  281 acatttaaatatttcttataaataggactggagggagtata 321  Q
    | | | |||| |||||||||||||| || ||||||||||||    
T  13807349 aaagtcaaatgtttcttataaatagaaccggagggagtata 13807389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 41850607 - 41850746
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| || | |||||| ||||||||| ||||| ||||||   || || |||||||| ||||||||| || ||| |||| ||| |||    
T  41850607 tcttatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatcaaa 41850706  T
Q  281 acatttaaatatttcttataaataggactggagggagtat 320  Q
    | | | |||| ||||||||||||||||| ||| |||||||    
T  41850707 aaagtaaaatgtttcttataaataggaccggatggagtat 41850746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 2523904 - 2523775
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtc-tagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| | || | |||||||||||||| ||||||  | ||| |||| ||| ||||     
T  2523904 tatttataagaaaaagttgactttttagattcattgagtaattaatgta-cttggcatagaatatagaccagatacatcgtttatgcaatgaatcaaaaa 2523806  T
Q  283 atttaaatatttcttataaataggactggag 313  Q
    | | |||| ||||||||||||| ||| ||||    
T  2523805 agtcaaatgtttcttataaataagaccggag 2523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 320
Target Start/End: Original strand, 4826767 - 4826911
Alignment:
Q  175 ctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataa 274  Q
    ||||| || ||||||||||||||| || |||||||| ||||||| | |||||||||||    | |||||| ||||||||||||||| | |||| |||| |    
T  4826767 ctccagtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaa-atagaccaaatacatcaactattcaatga 4826865  T
Q  275 attaaaacatttaaatatttcttataaataggactggagggagtat 320  Q
    || |||| | | || | ||||||||| ||||||| |||||||||||    
T  4826866 atcaaaaaagtaaattgtttcttatatataggaccggagggagtat 4826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 24163294 - 24163418
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatt 293  Q
    |||||||| |||||||| ||||||||  ||||| ||||||| ||  |||||||||||||| |||||| || ||| |||| |||||||| | | |||| ||    
T  24163294 aaaaattt-actttttagattcattgtataattaatgtatcttgcgtagaatatagaccatatacatcatttatgcaatgaattaaaaaagtgaaatgtt 24163392  T
Q  294 tcttataaataggactggagggagta 319  Q
    ||||||||||||| | |||| |||||    
T  24163393 tcttataaataggtccggagagagta 24163418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 27231967 - 27231831
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  27231967 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 27231869  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||  ||||||| ||||||||||||    
T  27231868 gtaaattgtttcttatgtataggaccggagggagtata 27231831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 2680993 - 2680869
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatg-tctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    ||||||||| ||||| ||||||||||| ||| ||||  ||||  ||||||| |  ||||||||||||| ||||||||| || |||| ||| ||| ||||     
T  2680993 tatttataaaaaaaagttgactttttagatttattgtataatgaatgtatctttctctagaatatagatcaaatacatcatttatataatgaatcaaaaa 2680894  T
Q  283 atttaaatatttcttataaatagga 307  Q
    | | |||||||||||||||||||||    
T  2680893 agtcaaatatttcttataaatagga 2680869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 2400096 - 2399966
Alignment:
Q  175 ctccaatcttatttataagaaaaa-tttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaata 273  Q
    ||||| || ||||||||| ||||  ||||||||||||  ||| |||| |||||||||||||  ||||| ||||||||  |||||||| || ||||||||     
T  2400096 ctccagtcctatttataaaaaaatgtttgactttttaggttcgttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatg 2399997  T
Q  274 aattaaaacatttaaatatttcttataaata 304  Q
    ||| |||| | | |||| |||||||||||||    
T  2399996 aatcaaaaaagtcaaatgtttcttataaata 2399966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 41863715 - 41863665
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  41863715 tatttataagaaaaaattgactttttaaattcattgtgtaattaatgtatc 41863665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 327
Target Start/End: Complemental strand, 7456538 - 7456410
Alignment:
Q  199 tttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttctta 298  Q
    |||||||||||| ||||||||||||||| ||||||| |||    ||||||||| | |||||| || |||||||| |||  ||| | | ||||||||||||    
T  7456538 tttgactttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttctta 7456439  T
Q  299 taaataggactggagggagtatagttttt 327  Q
    |||  ||||| |||| || |||| |||||    
T  7456438 taataaggaccggagcgaatatatttttt 7456410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 32811511 - 32811376
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| ||||||||||||| |  | |||||| ||||||||||||||| |  ||| |||| ||| |||| |    
T  32811511 tatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaa-atagaccaaatacatcaattattcaatgaatcaaaaaa 32811413  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | || | ||||||||| ||||||  |||||||||||    
T  32811412 gtaaattgtttcttatatataggatcggagggagtat 32811376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 31227504 - 31227642
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| || | |||||| ||||||| | || |||||||||   | |||||| ||||||||||||||| | |||| |||| ||| |||    
T  31227504 tcttatttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaa-atagaccaaatacatcaactattcaatgaatcaaa 31227602  T
Q  281 acatttaaatatttcttataaataggactggagggagtat 320  Q
    | | | || | ||||||||| |||||| | ||||||||||    
T  31227603 aaagtaaattgtttcttatatataggattagagggagtat 31227642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 32811842 - 32811767
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||||||||| || | |||||| |||||||||||||||||| |||   || |||||||| ||||||||||||    
T  32811842 atttataagaaaaaattaattttttagattcattgagtaattgatttatatggtatagaatatggaccaaatacat 32811767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 314
Target Start/End: Complemental strand, 1366731 - 1366599
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||| ||||||| || |||||||| ||||||| | ||||||||||| |  ||  |||| ||||||||||||||| | |||| |||| ||| |||    
T  1366731 tcttatttatcagaaaaagttaactttttagattcattcaataattgatgtacctagttcagaa-atagaccaaatacatcaactattcaatgaatcaaa 1366633  T
Q  281 acatttaaatatttcttataaataggactggagg 314  Q
    | | | || | ||||||||| ||||||| |||||    
T  1366632 aaagtaaattgtttcttatatataggaccggagg 1366599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 188 - 281
Target Start/End: Complemental strand, 40142903 - 40142810
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||||| |||| |||||| ||| ||||  ||||| ||||||| ||| ||| ||||||||||||||||| || ||| |||| ||| ||||    
T  40142903 tataagaaaaaattgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatttatgcaatgaatcaaaa 40142810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 302
Target Start/End: Original strand, 48838347 - 48838444
Alignment:
Q  205 tttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaa 302  Q
    |||||| |||||||||| |||| ||||||   || || |||||||||||||||||| || |||  ||| |||||||| | |||||| |||||||||||    
T  48838347 tttttagattcattgagcaattaatgtatttggtataaaatatagaccaaatacatcatttatgtaatgaattaaaaaagttaaatgtttcttataaa 48838444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 23870978 - 23871042
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||| |||| |||||||||||||||||||||||| |||||  || |||||| ||||| ||||||    
T  23870978 tactccctccgatcttatttataagaaaaatttgattttttcgatacattgaataatttatgtat 23871042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 28020136 - 28020002
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||| ||||||| || |||||| ||||||| | |||||| ||||||    |||||| ||||||||||||||| | |||| |||| ||| |||    
T  28020136 tcttatttataaaaaaaatt-gattttttagattcattaaataattgttgtatctgacctagaa-atagaccaaatacatcaactattcaatgaatcaaa 28020039  T
Q  281 acatttaaatatttcttataaataggactggagggag 317  Q
    | | | || | |||||||||||||||||  |||||||    
T  28020038 aaagtaaattgtttcttataaataggaccagagggag 28020002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 39153301 - 39153377
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||| ||||||||||||  ||||||||  ||| ||||||||   ||||| | ||||||||||||||||    
T  39153301 tatttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacat 39153377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 43174299 - 43174358
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctaga 243  Q
    |||||||||||||| ||| |||||||| ||| ||| | ||||||||||||| ||||||||    
T  43174299 tatttataagaaaattttaactttttagattaattaaataattgatgtatcttgtctaga 43174358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 2399953 - 2400015
Alignment:
Q  171 ctctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    |||||||  ||||||||||||||||| ||||||||||||  ||||||||  ||| ||||||||    
T  2399953 ctctctctgatcttatttataagaaacatttgacttttttgattcattgtataaatgatgtat 2400015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 19512749 - 19512795
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||||||| | ||||||||||||||||||||| ||||||| |||||    
T  19512749 tataagaaacaattgactttttaaattcattgaataattgacgtatc 19512795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 45533367 - 45533329
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattg 219  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  45533367 tcttatttataagaaacatttgacttttttaattcattg 45533329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 47942971 - 47942841
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||  |||||||||||||||| ||| | ||||| ||||||  |||||| |||||| |  ||||| || ||  ||||||| ||| |||| |    
T  47942971 tatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcatacaatgaatcaaaaaa 47942872  T
Q  284 tttaaatatttcttataaataggactggagg 314  Q
     | ||||||||  |||||||| ||| |||||    
T  47942871 gtgaaatattttatataaataagaccggagg 47942841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 47948401 - 47948271
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||  |||||||||||||||| ||| | ||||| ||||||  |||||| |||||| |  ||||| || ||  ||||||| ||| |||| |    
T  47948401 tatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcatacaatgaatcaaaaaa 47948302  T
Q  284 tttaaatatttcttataaataggactggagg 314  Q
     | ||||||||  |||||||| ||| |||||    
T  47948301 gtgaaatattttatataaataagaccggagg 47948271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 3411481 - 3411388
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataa 262  Q
    ||||| |||| ||| ||||||||||| ||||||||||||||| || |||||| ||||  ||||| |  ||| ||||  || |||||||||||||    
T  3411481 tactccctccgatcctatttataagagaaatttgactttttagatacattgaataatgtatgtacctagtcaagaacctaaaccaaatacataa 3411388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 6838513 - 6838460
Alignment:
Q  180 atcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||||||||| ||||||||||||  ||||||||  ||| ||||||||    
T  6838513 atcttatttataagaaacatttgacttttttgattcattgcataaatgatgtat 6838460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 26564055 - 26563966
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaata 273  Q
    |||||| |||||| | ||||||||| | || |||||| ||||| | |||||  ||||||||| || |||||||||||||| ||| |||||    
T  26564055 tatttacaagaaacaattgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaata 26563966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 16861523 - 16861575
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    |||||| ||||| ||| | ||||||||||| ||||||||| ||||||||||||    
T  16861523 tcttatatataaaaaacaattgactttttagattcattgaataattgatgtat 16861575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 30486717 - 30486665
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||||| ||| |||||||||||| ||| ||||| ||| ||||||||    
T  30486717 tcttatttataagtaaattttgactttttagatttattgaataaatgatgtat 30486665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 45981022 - 45981097
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| | |||||||   |||||| |||| || ||||||||    
T  45981022 tatttataagaaaaaattgac-ttttaaattcattgaataactcatgtatctgatctagagtatatacaaaatacat 45981097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 169 - 308
Target Start/End: Original strand, 34332475 - 34332614
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| || |||     
T  34332475 tactccctccaatcttatatataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatc 34332574  T
Q  269 caataaattaaaacatttaaatatttcttataaataggac 308  Q
    |||| ||| |||| | | |||| |||||||||||||||||    
T  34332575 caatgaatcaaaaaagtcaaatgtttcttataaataggac 34332614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 519967 - 519832
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||||| || |||||||||||| |||| |    
T  519967 tatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaatcaaaaaa 519868  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | |||| ||| ||||||||||||| ||||||||||    
T  519867 gtcaaatgtttattataaataggaccggagggagta 519832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 49944847 - 49944977
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| || |||||||| ||| |||| |    
T  49944847 tatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatcaaaaaa 49944946  T
Q  284 tttaaatatttcttataaataggactggagg 314  Q
     | |||| |||||| |||||||||| |||||    
T  49944947 atcaaatgtttcttgtaaataggaccggagg 49944977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 38040410 - 38040273
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||| || || ||| |||| ||| |||| |    
T  38040410 tatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatcaaaaaa 38040311  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | |||| ||||||||||||||||| | ||||||||||    
T  38040310 gtcaaatgtttcttataaataggaccgaagggagtata 38040273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 169 - 309
Target Start/End: Original strand, 640521 - 640660
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    |||||||||| || |||||||||||||||| ||||||||||| |||||| |||||||||||||||| | |||| ||||||||| ||||||||||| ||||    
T  640521 tactctctccgattttatttataagaaaaaattgactttttagattcat-gagtaattgatgtatcttatctaaaatatagactaaatacataatttata 640619  T
Q  269 caataaattaaaacatttaaatatttcttataaataggact 309  Q
    |||| ||| |||| | |||||| |||| |||||||||||||    
T  640620 caatgaatgaaaaaaattaaatgtttcatataaataggact 640660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 26070835 - 26070974
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| || ||| |||| ||| |||    
T  26070835 tcttatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatgaatcaaa 26070934  T
Q  281 acatttaaatatttcttataaataggactggagggagtat 320  Q
    | | | |||| ||||||||||||| ||| |||| ||||||    
T  26070935 aaagtaaaatgtttcttataaataagaccggagagagtat 26070974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 38738065 - 38737942
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||  | ||| |||| ||| |||| |    
T  38738065 tatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatcaaaaaa 38737966  T
Q  284 tttaaatatttcttataaatagga 307  Q
     | |||| ||||||||||||||||    
T  38737965 gtcaaatgtttcttataaatagga 38737942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 44939200 - 44939070
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||| ||| |||| |||||| |||||||||||||||||||||||   ||||||||||||||||||||||| || |||||||| ||| |||| |    
T  44939200 tatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaataaaaaaa 44939101  T
Q  284 tttaaatatttcttataaataggactggagg 314  Q
     | |||| ||||||||||||||||| |||||    
T  44939100 gtcaaatgtttcttataaataggaccggagg 44939070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 26924227 - 26924363
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| |||||    || ||||||||||||||||||||| || ||| |||| ||| |||| |    
T  26924227 tatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatcaaaaaa 26924326  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||||||||| |||||||||||    
T  26924327 gtcaaatgtttcttataaataggaccggagggagtat 26924363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 15342957 - 15343074
Alignment:
Q  190 taagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaa 289  Q
    ||||||||| |||| |||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||| || ||| |||| ||| |||| | | |||    
T  15342957 taagaaaaagttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaaatcaaa 15343056  T
Q  290 tatttcttataaatagga 307  Q
    ||||||||||||||||||    
T  15343057 tatttcttataaatagga 15343074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 47912948 - 47912827
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||| ||||||||||||| ||||  ||||| ||||||| |||||||  |||||| ||||||||| || |||||||||||| |||| |    
T  47912948 tatttataagaaaaatt-gactttttaaatttattgtataattaatgtatcttgtctag--tatagatcaaatacattatttatacaataaatcaaaaaa 47912852  T
Q  284 tttaaatatttcttataaataggac 308  Q
     | ||||||||||||||||||||||    
T  47912851 gtcaaatatttcttataaataggac 47912827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 50155432 - 50155335
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||   ||||| |||||||||||||||||| || ||| |||| ||||||||    
T  50155432 tatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatgcaatgaattaaaa 50155335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 23923564 - 23923636
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaat 256  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||||  |||||||||||||||||||||    
T  23923564 tatttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaat 23923636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 26760307 - 26760183
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||||||||||||||| ||| |||||    || ||||||||||||||||||||| || ||| |||| ||| |||| |    
T  26760307 tatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatcaaaaaa 26760208  T
Q  284 tttaaatatttcttataaataggac 308  Q
     | |||| |||||||||||||||||    
T  26760207 gtcaaatgtttcttataaataggac 26760183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 7375603 - 7375529
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatac 258  Q
    ||||||||||||||| ||||||||||| |||||||| |||||| ||||||| ||||||||||||| |||||||||    
T  7375603 tatttataagaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctagaatataaaccaaatac 7375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 37178948 - 37179060
Alignment:
Q  208 ttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatagga 307  Q
    |||||||||||| |||||| ||||||| |||||| ||||||||| |||||||| || |||||||||||| |||| | | |||| |||||||||| ||||     
T  37178948 ttaaattcattgtgtaattaatgtatcttgtctaaaatatagactaaatacatcatttatacaataaatcaaaaaagtcaaatgtttcttataattaggg 37179047  T
Q  308 ctggagggagtat 320  Q
    | ||||| |||||    
T  37179048 ccggaggaagtat 37179060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 5891839 - 5891724
Alignment:
Q  205 tttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaata 304  Q
    |||||| ||||||||| ||||| || |||   || | ||||||| ||||||||||| || ||| |||| |||||||| | ||||||||||||||||||||    
T  5891839 tttttatattcattgattaattaatatatttggtattgaatataaaccaaatacattatatatgcaattaattaaaaaagttaaatatttcttataaata 5891740  T
Q  305 ggactggagggagtat 320  Q
    |||| |||||||||||    
T  5891739 ggaccggagggagtat 5891724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 37515224 - 37515105
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||| |||||||| ||||||| ||||||| ||||||  ||||| |||||| ||  |||||||| || ||| |||||||| |||| |    
T  37515224 tatttataagaaaaatttaactttttagattcattaagtaattaatgtatgttgtctggaatatggattaaatacattatttatgcaataaataaaaaaa 37515125  T
Q  284 tttaaatatttcttataaat 303  Q
     |||||| ||| ||||||||    
T  37515124 gttaaatgttttttataaat 37515105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 11386165 - 11386292
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaa-attcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaa 279  Q
    |||| ||||||||||||| |||| ||||| | ||||||||| |||||||||| ||  ||||||||||||||| |||||||| || ||| |||| ||| ||    
T  11386165 tcttttttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaatcaa 11386264  T
Q  280 aacatttaaatatttcttataaataggac 308  Q
    || | | |||| |||||||||||||||||    
T  11386265 aa-agtcaaatgtttcttataaataggac 11386292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 24305799 - 24305664
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||| ||||||||||| | |||||||||| ||||||||||||||||||| ||| ||||||||| |||  |||||| || ||| | || ||| |||| |    
T  24305799 tatttagaagaaaaatttaattttttaaatttattgagtaattgatgtatcttgtatagaatataaaccttatacatcatttatgcgatgaataaaaaaa 24305700  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | |||||||| ||||||| || || |||| |||||    
T  24305699 atcaaatattttttataaacagaaccggagagagta 24305664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 38590202 - 38590124
Alignment:
Q  184 tatttataagaaaaat--ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||||||||||   || |||||||| |||||||||||||||||||||||  || |||||||||||||||||||||    
T  38590202 tatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacat 38590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 187 - 319
Target Start/End: Original strand, 18744576 - 18744704
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacattt 286  Q
    |||||||||||| ||||||||||| ||||||||| ||||||   |||    ||||||||||||||| ||||||| || ||| |||| ||| |||| | ||    
T  18744576 ttataagaaaaagttgactttttagattcattgaataattg---tatttgatctagaatatagacc-aatacatcatttatgcaatgaataaaaaaagtt 18744671  T
Q  287 aaatatttcttataaataggactggagggagta 319  Q
    |||| |||||| |||||||||| ||||||||||    
T  18744672 aaatgtttcttttaaataggaccggagggagta 18744704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 23923408 - 23923470
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaata 246  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||| |||||||||||    
T  23923408 tatttataagaaaaatttgaatttttagattcgttgaataattgatgtatcttgtctagaata 23923470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 47883976 - 47884065
Alignment:
Q  183 ttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaat 272  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||||||| | | ||  |||||||| ||||| || || ||||||||    
T  47883976 ttatttataagaaaaaattgactttttaaattaatttagtaattgatgtatcttatttaagatatagacaaaataaattatttatacaat 47884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 29256732 - 29256606
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||| |   || || |||| ||||||||||||| || ||| |||| ||| |||| |    
T  29256732 tatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaata-agaccaaatacatcatttatgcaatgaatcaaaaaa 29256634  T
Q  284 tttaaatatttcttataaataggactggag 313  Q
       |||| ||||||||||||||||| ||||    
T  29256633 --aaaatgtttcttataaataggaccggag 29256606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 6661549 - 6661642
Alignment:
Q  205 tttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttctta 298  Q
    |||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||| ||| |||| | | |||| |||||||    
T  6661549 tttttagattcatttagtaattaatgtatcttgtatagaatatagaccaaatacatcatttatgcaattaatcaaaaaagtcaaatgtttctta 6661642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 34662696 - 34662832
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||| ||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  34662696 tatttataaaaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 34662794  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||| ||| ||||||||||||    
T  34662795 gtaaattgtttcttatatataagaccggagggagtata 34662832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 43929479 - 43929345
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  |  ||||| ||||||||||||||| | ||||  ||| ||| |||| |    
T  43929479 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactatttaatgaatcaaaaaa 43929381  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | || | ||||||||| ||||||| ||||||||||    
T  43929380 gtaaattgtttcttatatataggaccggagggagta 43929345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 47678389 - 47678255
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||| |||||| | ||||||| | ||||||||||| |    |||||| ||||| ||||||||| | |||| |||| ||| |||| |    
T  47678389 tatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaatgaatcaaaaaa 47678291  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | || | ||||||||| ||||||| ||||||||||    
T  47678290 gtaaattgtttcttatatataggaccggagggagta 47678255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 2855217 - 2855099
Alignment:
Q  186 tttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatt 285  Q
    ||||||| ||| | ||||||||||||||||||||  |||||||| ||||  ||||| |||||| | |||||| || |||| | ||||||||| ||| | |    
T  2855217 tttataaaaaacaattgactttttaaattcattgtttaattgatatatcccgtctaaaatatatatcaaataaatcatctcttcaataaatttaaaaagt 2855118  T
Q  286 taaatatttcttataaata 304  Q
     || | |||||||||||||    
T  2855117 caattgtttcttataaata 2855099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 39748629 - 39748682
Alignment:
Q  180 atcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||||||||| |||||||||||| |||||||||  ||| ||||||||    
T  39748629 atcttatttataagaaatatttgacttttttaattcattgcataaatgatgtat 39748682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 45848938 - 45849003
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||| ||||| |||||||||||||||| | || |||||||| ||||||| | |||||||||||||    
T  45848938 tactccctccattcttatttataagaaacaattaactttttatattcatttaataattgatgtatc 45849003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 27819449 - 27819373
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||||||| ||||||||||| |||||||| ||||||||| || ||| |||||  |||||| |||||| | ||||||    
T  27819449 tcttatttacaagaaaaatttaactttttagattcattgaatatttggtgtattttgtctaaaatataaatcaaata 27819373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 33018255 - 33018303
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    ||||||||||||| |||||| |||||||||||||||  |||||||||||    
T  33018255 tatttataagaaacatttgattttttaaattcattgcataattgatgta 33018303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 6793605 - 6793656
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    |||||||||||||||||| || | |||||||||||||||| ||||| |||||    
T  6793605 tcttatttataagaaaaagttaattttttaaattcattgaataattaatgta 6793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 47946015 - 47946093
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataa 262  Q
    ||||||||||||||  ||||||||||| ||||||| | |||||  ||||||   ||||||||| |||||| ||||||||    
T  47946015 tatttataagaaaagcttgactttttagattcattaaataattattgtatccgatctagaataaagaccacatacataa 47946093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 10015144 - 10015201
Alignment:
Q  203 actttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||| |||||||||| ||| |||||||||  ||||| ||||||||||| ||||||    
T  10015144 actttttgaattcattgaataaatgatgtatccagtctaaaatatagaccagatacat 10015201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 20273231 - 20273174
Alignment:
Q  203 actttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||| |||||||||| ||| |||||||||  ||||| ||||||||||| ||||||    
T  20273231 acttttttaattcattgaataaatgatgtatccagtctataatatagaccagatacat 20273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 25021245 - 25021294
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||||| |  |||||||||| ||||||||| ||||||||||||    
T  25021245 tatttataagaaacaaatgactttttagattcattgaataattgatgtat 25021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 26760187 - 26760236
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||||| ||||||||||||  ||||||||| ||| ||||||||    
T  26760187 tatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26760236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 26823151 - 26823248
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||| ||||| || |||||||||||| ||||| ||||||||  |||   |||||||||||||| || ||||| ||  || |||||||| ||||    
T  26823151 tatttataataaaaaattaactttttaaatttattgaataattgatacatctaatctagaatatagacgaagtacatcattaatgcaataaatcaaaa 26823248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 26924347 - 26924298
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||||| ||||||||||||  ||||||||| ||| ||||||||    
T  26924347 tatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26924298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 28359056 - 28359007
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    |||||||||||||||  ||| |||||||||||||||| ||||| ||||||    
T  28359056 tatttataagaaaaaaatgaatttttaaattcattgaataattaatgtat 28359007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 15286087 - 15286023
Alignment:
Q  240 tagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaata 304  Q
    ||||||||||| ||||||||| || |||| ||| |||||||| | | |||| |||||||||||||    
T  15286087 tagaatatagatcaaatacatcatttatataatgaattaaaaaagtcaaatgtttcttataaata 15286023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 15699481 - 15699569
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaa 275  Q
    ||||||||||  ||||| |||||| ||||||||||||||| ||||||| |||    ||||||||| | |||||| |  |||||||||||    
T  15699481 ttataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttatacaataaa 15699569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 34146938 - 34146862
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||||| |||| |||||  ||||||||| ||||| ||||||    ||||||||||| | |||||||||    
T  34146938 tatttataagaaaaaattgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacat 34146862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 47844548 - 47844596
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    |||||||||||||||||| |||||| | ||||||| | |||||||||||    
T  47844548 tatttataagaaaaatttaacttttgagattcattcaataattgatgta 47844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 35099189 - 35099069
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||| ||||||||| |||| |||||| || |||| ||||||||||||||||||||||||| || ||||||||||||||||| |    
T  35099189 tatttataagaaaaagttgaccttttaaatttattgtgtaattaatatatcttgtctagaatatagaccaaatacatcatttatacaataaattaaaaaa 35099090  T
Q  284 tttaaatatttcttataaata 304  Q
     ||||||||||||||||||||    
T  35099089 gttaaatatttcttataaata 35099069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 169 - 308
Target Start/End: Original strand, 44518035 - 44518174
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    |||||||| | ||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||| |||||||||||||||||| || || |    
T  44518035 tactctcttcgatcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttaga 44518134  T
Q  269 caataaattaaaacatttaaatatttcttataaataggac 308  Q
    |||| ||| |||| | | |||  |||||||||||||||||    
T  44518135 caatgaatcaaaaaagtcaaagttttcttataaataggac 44518174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 54537457 - 54537592
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||| |||||||| ||| ||| |||| ||| |||| |    
T  54537457 tatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgcaatgaatcaaaaaa 54537556  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | ||  |||||||||||||||||| | ||||||||    
T  54537557 gtcaataatttcttataaataggaccgaagggagta 54537592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 23223091 - 23222972
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||| || |||| |||||||||||| |    
T  23223091 tatttataagaaaaaattga-tttttagattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaattaaaaaa 23222993  T
Q  284 tttaaatatttcttataaata 304  Q
     | |||| |||||||||||||    
T  23222992 gtcaaatgtttcttataaata 23222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 45010899 - 45010748
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||||||||  || ||||||||||| ||| || | |||||| ||| ||||| |||||||||||||  || |||||||||||||| | |||| || ||||    
T  45010899 tactctctccggtcctatttataagagaaaattaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttata 45010800  T
Q  269 caataaattaaaacatttaaatatttcttataaataggactggagggagtat 320  Q
    |||||||| |||| | | ||||||||||||||||||||||| ||||||||||    
T  45010799 caataaatcaaaaaagtcaaatatttcttataaataggactagagggagtat 45010748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 43448972 - 43449108
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||| |||| ||||||  ||||| ||||||||||| || |||||||| ||  |||| |    
T  43448972 tatttataagaaaaagttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaaccaaaaaa 43449071  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||||||||||||||||||||  | |||||||||    
T  43449072 atcaaatatttcttataaataggatcgaagggagtat 43449108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 21662900 - 21663035
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||    || |||| |||||||||||||||| || ||| |||| ||| |||| |    
T  21662900 tatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttatgcaatgaatcaaaaaa 21662999  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     |||||| ||||||||||||| ||| ||||||||||    
T  21663000 gttaaatgtttcttataaataagaccggagggagta 21663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 53442041 - 53441905
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| |||||    || |||||| || ||||||||||| || ||| |||| ||| |||| |    
T  53442041 tatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgcaatgaatcaaaaaa 53441942  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||||||||| |||||||||||    
T  53441941 gtaaaatgtttcttataaataggaccggagggagtat 53441905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 52864950 - 52865100
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    |||||||| | || |||||||| |||||||||| |||||||| ||||||||||||||||||||||| | |||| ||||||||| ||||| || || |||     
T  52864950 tactctcttccattttatttatgagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatg 52865049  T
Q  269 caataaattaaaacatttaaatatttcttataaataggactggagggagta 319  Q
    |||| ||| |||| | | || ||||| ||||||||||  | ||||||||||    
T  52865050 caatgaatcaaaaaagtcaattattttttataaatagcgccggagggagta 52865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 319
Target Start/End: Complemental strand, 12065041 - 12064908
Alignment:
Q  186 tttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatt 285  Q
    ||||||||||||| ||||||||||||||||||| ||||||| || |||   || ||||||||||||||||||||| ||  || |||| ||| |||| | |    
T  12065041 tttataagaaaaaattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaaaaagt 12064942  T
Q  286 taaatatttcttataaataggactggagggagta 319  Q
     |||| |||||||||| |||||| ||||||||||    
T  12064941 aaaatgtttcttataagtaggaccggagggagta 12064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 205 - 304
Target Start/End: Complemental strand, 25954135 - 25954036
Alignment:
Q  205 tttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaata 304  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || || |||| ||| |||||||| | | ||| ||||||||||||||    
T  25954135 tttttaaattcattgagtaattaatgtatcttgtctagaatatagatcaaatatatcatttatataatgaattaaaaaagtcaaacatttcttataaata 25954036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 298
Target Start/End: Complemental strand, 12747846 - 12747717
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||||||||  || ||||||||||||||| |||| |||||| |||||| |||||||||||||||   |||||||||||| |||||||||| ||| |||     
T  12747846 tactctctccggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtatttggtctagaatatacaccaaatacacaatttatg 12747747  T
Q  269 caataaattaaaacatttaaatatttctta 298  Q
    |||| ||| |||| | | |||| |||||||    
T  12747746 caatgaatcaaaaaaatcaaatgtttctta 12747717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 51723392 - 51723528
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| ||||||||||||||| ||||||    | |||||||||||| ||||| || || |||||||| ||| |||| |    
T  51723392 tatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaatcaaaaaa 51723491  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     |||||| |||| ||| ||||| || |||||||||||    
T  51723492 gttaaatttttcctattaatagaaccggagggagtat 51723528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 198 - 320
Target Start/End: Original strand, 8266261 - 8266381
Alignment:
Q  198 atttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttctt 297  Q
    |||| |||||||| ||||||||||||||||||||||  | |||| ||||||  ||||| |||| || |||||||| ||| |||| | | |||| ||||||    
T  8266261 atttaactttttagattcattgagtaattgatgtattttatctaaaatata--ccaaacacattatttatacaatgaatcaaaaaagtcaaatgtttctt 8266358  T
Q  298 ataaataggactggagggagtat 320  Q
    ||||||||||| |||||||||||    
T  8266359 ataaataggaccggagggagtat 8266381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 25910322 - 25910188
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacattt 286  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||   || |||||||||||||||||||||  | ||| || | ||| ||||   |     
T  25910322 ttataagaaaaagttgactttttaaatttattgagtaattaatgtatttggtgtagaatatagaccaaatacattctttatgcagtgaataaaaaatctc 25910223  T
Q  287 aaatatttcttataaataggactggagggagtata 321  Q
    |||| ||||||||||||| ||| | ||||||||||    
T  25910222 aaatgtttcttataaatatgacggaagggagtata 25910188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 53357423 - 53357325
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattg-agtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||| ||||||||  ||||||||||| ||| |||| |||||||||| |||| |||||||||||||||||||||| || || ||| |||||||||||||    
T  53357423 tatttgtaagaaaacattgactttttagatttattggagtaattgatctatcttgtctagaatatagaccaaatatatcatttatgcaataaattaaaa 53357325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 29457973 - 29457837
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | | ||||||||| |  |||||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  29457973 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 29457875  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||||||||| ||||||    
T  29457874 gtaaattgtttcttatatataggactggaggaagtata 29457837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 51516972 - 51517107
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtc-tagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    ||||||||||||||| ||||||||||| ||| || |||||||| ||||| | || | ||||||||||||||||||||| || ||| |||| ||  ||||     
T  51516972 tatttataagaaaaagttgactttttagatt-atggagtaattaatgta-cttggcatagaatatagaccaaatacatcatttatgcaatgaaccaaaaa 51517069  T
Q  283 atttaaatatttcttataaataggactggagggagtat 320  Q
    | | |||| ||||||||||||||||| |||||||||||    
T  51517070 agtcaaatgtttcttataaataggaccggagggagtat 51517107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 40460356 - 40460448
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaatt-gatgtatcatgtctagaatatagaccaaatacataatctatacaat 272  Q
    |||||||||||||||||| || |||||||| |||||||| ||||||  ||||||| ||| || |||||||||||||||||| || ||||||||    
T  40460356 tcttatttataagaaaaaattaactttttagattcattgtgtaattaaatgtatcttgtttaaaatatagaccaaatacatcatttatacaat 40460448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 33808443 - 33808321
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||||   |  |||||||| |||||| || || || ||| |||||||| |||| |    
T  33808443 tatttataagaaaaatt-gactttttaaattaattgaataattgatgtatttggattagaatattgaccaagtatattatttatgcaataaataaaaaaa 33808345  T
Q  284 tttaaatatttcttataaatagga 307  Q
     | |||||||| ||||||||||||    
T  33808344 atcaaatattttttataaatagga 33808321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 320
Target Start/End: Original strand, 48593173 - 48593292
Alignment:
Q  201 tgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttata 300  Q
    |||||||||| || |||||| |||||||||||||  ||||||||||||||||||||||||||  ||| |||| |||  ||| | |||  | |||||| ||    
T  48593173 tgactttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaaattacttgtttcttgta 48593272  T
Q  301 aataggactggagggagtat 320  Q
     ||||||| |||||||||||    
T  48593273 tataggaccggagggagtat 48593292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 306
Target Start/End: Original strand, 43343445 - 43343582
Alignment:
Q  174 tctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaa-----atacataatctata 268  Q
    ||||| ||| ||||||||||||||| ||||||||||| ||| |||| |||||| |||||||   |||||||||||||||||      ||||| || ||||    
T  43343445 tctccgatcatatttataagaaaaaattgactttttagattaattgcgtaattaatgtatctactctagaatatagaccaattggtgtacatcatttata 43343544  T
Q  269 caataaattaaaacatttaaatatttcttataaatagg 306  Q
    |||| ||| |||| | | |||| |||||||||||||||    
T  43343545 caatgaatcaaaaaagtcaaatgtttcttataaatagg 43343582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 19649713 - 19649637
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||| |||||| |||||| |||||| ||||||||||||||||||||||   ||||| ||||||||| ||||||||    
T  19649713 tatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacat 19649637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 33371866 - 33372011
Alignment:
Q  175 ctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataa 274  Q
    |||| ||| ||||||||||||||| || | |||||||||| ||| | ||||||||||| |  | ||| || ||||||||||||||| | |||| |||| |    
T  33371866 ctccgatcatatttataagaaaaagttaattttttaaatttattcaataattgatgtacctagcctaaaa-atagaccaaatacatcaactattcaatga 33371964  T
Q  275 attaaaacatttaaatatttcttataaataggactggagggagtata 321  Q
    || |||| | | || ||||||||||| ||||||| |||| |||||||    
T  33371965 atcaaaaaaataaattatttcttatatataggaccggagcgagtata 33372011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 28406601 - 28406525
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||| |||||| | |||||||||||  |||||||| ||||| ||||| |  ||||||||||||||||||||||||    
T  28406601 tatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacat 28406525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 49885393 - 49885468
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||||| || | |||||| ||||||| | |||||||||||||  |||||||| |||||||||||||||    
T  49885393 tatttataagaaaaaattaattttttagattcattcaataattgatgtatctagtctagaa-atagaccaaatacat 49885468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 13622593 - 13622486
Alignment:
Q  212 attcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaataggactgg 311  Q
    |||||||| ||| || ||||||| ||| || ||||||||||||||| || || ||| |||| || ||||| | | |||| ||||||||||||||||| ||    
T  13622593 attcattgtgtagttaatgtatcttgtgtaaaatatagaccaaatatatcatttatgcaatgaactaaaaaagtcaaatgtttcttataaataggaccgg 13622494  T
Q  312 agggagta 319  Q
     |||||||    
T  13622493 tgggagta 13622486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 40198394 - 40198485
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||| |||| |||||||||||||||| | |||| |||||  ||||||||| ||||| ||||||   ||||||||||| ||||| ||||||    
T  40198394 tactctatccagtcttatttataagaaacaattgaatttttttattcattgaataatttatgtattcggtctagaatatcgaccagatacat 40198485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 7136899 - 7136814
Alignment:
Q  175 ctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||  |||||||||  ||| ||||| |||||||||| ||| ||||||| ||||||| | | |||||||||||||||| ||||    
T  7136899 ctccaattctatttataaataaactttgaatttttaaatttattaagtaattaatgtatcttctatagaatatagaccaaacacat 7136814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 23920634 - 23920679
Alignment:
Q  180 atcttatttataagaaaaatttgactttttaaattcattgagtaat 225  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||    
T  23920634 atcttatttataagaaaaaattgatttattaaattcattgagtaat 23920679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 32711317 - 32711260
Alignment:
Q  203 actttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||| ||||||||| |||||||||||||  ||||| ||||||| ||||||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacat 32711260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 36985170 - 36985303
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||  || | |||| | ||| ||||  ||||| ||||||| ||| |||||||||||| |||||||| || ||| |||| ||| |||| |    
T  36985170 tatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaatgaatcaaaaaa 36985269  T
Q  284 tttaaatatttcttataaataggactggagggag 317  Q
     | ||| |||||||||||||  || |||||||||    
T  36985270 gtcaaaaatttcttataaatgagattggagggag 36985303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 37010609 - 37010742
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||  || | |||| | ||| ||||  ||||| ||||||| ||| |||||||||||| |||||||| || ||| |||| ||| |||| |    
T  37010609 tatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaatgaatcaaaaaa 37010708  T
Q  284 tttaaatatttcttataaataggactggagggag 317  Q
     | ||| |||||||||||||  || |||||||||    
T  37010709 gtcaaaaatttcttataaatgagattggagggag 37010742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 47505231 - 47505304
Alignment:
Q  186 tttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaataca 259  Q
    ||||||||||||  |||||| |||| ||||||| | ||||| ||||||| ||| ||||||||||| ||||||||    
T  47505231 tttataagaaaatattgactctttacattcatttactaattaatgtatcttgtttagaatatagatcaaataca 47505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 43014485 - 43014533
Alignment:
Q  200 ttgactttttaaattcattgagtaattgatgtatcatgtctagaatata 248  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  43014485 ttgactttttatatttattgaataattgatgtatcaggtctagaatata 43014533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 29290794 - 29290889
Alignment:
Q  186 tttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||||||| || |||||||| |||||||||  || |||||||||   |||| | ||||||| ||||||||||  ||| |||| ||||||||    
T  29290794 tttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaattaaaa 29290889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 40198532 - 40198401
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||  ||| | ||||||||||| ||| |||||  ||||||||||||  ||| | | | |||||| |||||||||  ||| |||| ||| |||    
T  40198532 tcttatttatagtaaacaattgactttttagatttattgaacaattgatgtatctggtcgatattctagaccgaatacataaattattcaatgaataaaa 40198433  T
Q  281 acatttaaatatttcttataaataggactgga 312  Q
    | ||| || | ||||||||||||| |||||||    
T  40198432 aaattcaattgtttcttataaataagactgga 40198401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 9190162 - 9190084
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataa 262  Q
    ||||||||||| ||| ||||||||||| || |||||| ||||  |||||||  ||| ||||| || |||||||||||||    
T  9190162 tatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatttaaaccaaatacataa 9190084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 9236088 - 9236174
Alignment:
Q  172 tctctccaatcttatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||||| ||| || ||||||||||||  || |||||||  |||||||||||||||||||||||   | |||||||||||| |||||    
T  9236088 tctctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaattgatgtatctgatatagaatatagactaaata 9236174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 16295401 - 16295463
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatat 247  Q
    ||||||||||||| ||  |||| ||| ||| ||||| ||||||||||||| ||||||||||||    
T  16295401 atttataagaaaacttcaacttcttagatttattgaataattgatgtatcttgtctagaatat 16295463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 19649592 - 19649642
Alignment:
Q  183 ttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||| |||||| ||||||||||||  ||||||||| ||||||||||||    
T  19649592 ttatttacaagaaacatttgacttttttgattcattgaataattgatgtat 19649642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 9197159 - 9197094
Alignment:
Q  240 tagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatag 305  Q
    |||||||||||| |||||||| || ||| |||| ||| |||| | | |||||||||||||||||||    
T  9197159 tagaatatagacaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatag 9197094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 23825298 - 23825205
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataa 262  Q
    ||||| |||| ||| |||||| |||| ||| ||||||||||| || |||||| ||||  |||||||  ||| ||||| || |||||||||||||    
T  23825298 tactccctccgatcatatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataa 23825205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 44593212 - 44593265
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||||||| |||||||| |||||||||||||| |||||| ||||  |||||||    
T  44593212 tcttatttacaagaaaaagttgactttttaaatacattgaataatatatgtatc 44593265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 5177899 - 5177851
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    ||||||||||||||| || |||||||| ||||||| | |||||||||||    
T  5177899 tatttataagaaaaaattaactttttagattcattcaataattgatgta 5177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 34988173 - 34988205
Alignment:
Q  287 aaatatttcttataaataggactggagggagta 319  Q
    |||||||||||||||||||||| ||||||||||    
T  34988173 aaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 7e-35; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 40483417 - 40483282
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||| |||| | |||||||||| |||||||||||| || ||| |||| |||||||| |    
T  40483417 tatttattagaaaaatttgactttttcaatttattgagtaattgatatatcttatctagaatatggaccaaatacatcatttatgcaatgaattaaaaaa 40483318  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     |||||||||||||||||||||||| ||||| ||||    
T  40483317 gttaaatatttcttataaataggaccggaggtagta 40483282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 3236331 - 3236479
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||| |||| |||||||||||  |||||| ||||||||||||||||||||| |||||||||||||  || || ||| |||||||||||||| || ||||    
T  3236331 tactccctccgatcttatttat--gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttata 3236428  T
Q  269 caataaattaaaacatttaaatatttcttataaataggactggagggagta 319  Q
    |||| |||||||| | | |||||||||||||||||| ||| ||||||||||    
T  3236429 caatgaattaaaaaagtcaaatatttcttataaatatgaccggagggagta 3236479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 5031478 - 5031601
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| || ||| |||| ||| |||| |    
T  5031478 tatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaa 5031577  T
Q  284 tttaaatatttcttataaatagga 307  Q
     | |||| ||||||||||||||||    
T  5031578 gtcaaatgtttcttataaatagga 5031601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 194 - 320
Target Start/End: Complemental strand, 42123090 - 42122964
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatt 293  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||| || ||| |||| ||| |||| | | |||  ||    
T  42123090 aaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatcaaaaaagtcaaacgtt 42122991  T
Q  294 tcttataaataggactggagggagtat 320  Q
    |||||||||||||||||||||||||||    
T  42122990 tcttataaataggactggagggagtat 42122964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 185 - 320
Target Start/End: Complemental strand, 16448922 - 16448787
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacat 284  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| | | ||||||||| |||||||| || || ||| |||| ||| |||| |     
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaag 16448823  T
Q  285 ttaaatatttcttataaataggactggagggagtat 320  Q
    | |||| ||||||||||||||||| ||||| |||||    
T  16448822 tcaaatgtttcttataaataggaccggaggaagtat 16448787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 7693167 - 7693031
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||||   || || ||||||||| |||||||| || ||| |||| ||| |||| |    
T  7693167 tatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaatcaaaaaa 7693068  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| |||||||||||||||| ||||||||||||    
T  7693067 gtaaaatgtttcttataaataggattggagggagtat 7693031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 35149802 - 35149678
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| ||| |||| |||||| ||||||| ||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  35149802 tatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaattaatcaaaaaa 35149703  T
Q  284 tttaaatatttcttataaataggac 308  Q
     | |||| |||||||||||||||||    
T  35149702 gtcaaatgtttcttataaataggac 35149678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 10839768 - 10839913
Alignment:
Q  175 ctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataa 274  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||||| ||||| |||||    || ||||||||||||||||||||| || ||| |||| |    
T  10839768 ctccagtcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatga 10839867  T
Q  275 attaaaacatttaaatatttcttataaataggactggagggagtata 321  Q
    || |||| | |||||| ||||||||||||||||| ||| ||||||||    
T  10839868 atcaaaa-agttaaatgtttcttataaataggaccggatggagtata 10839913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 188 - 305
Target Start/End: Complemental strand, 16008653 - 16008536
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacattta 287  Q
    ||||||||||||||||||| ||| ||| |||||||| |||||||||  |||||||||||| |||||||||||| || ||| ||||| ||||||| | | |    
T  16008653 tataagaaaaatttgacttcttagatttattgagtacttgatgtattttgtctagaatattgaccaaatacattatttatgcaatagattaaaaaagtca 16008554  T
Q  288 aatatttcttataaatag 305  Q
    ||| ||||||||||||||    
T  16008553 aatgtttcttataaatag 16008536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 8793733 - 8793869
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||| |||| ||||  ||||| ||||||||||||||||||||||   ||||| ||||||||| |||||||| || ||| |||| ||| |||| |    
T  8793733 tatttataagtaaaagttgatattttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaaa 8793832  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||||||||||||||||||||| |||| ||||||    
T  8793833 gtcaaatatttcttataaataggaccggagagagtat 8793869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 15726893 - 15726758
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||  |||| ||| || |||||| || |||||||| || ||| | ||||||||||| |    
T  15726893 tatttataagaaaaaattgactttttagattcattgagtaattgacttatcttgtttaaaatatatacaaaatacatcatttatgcgataaattaaaa-a 15726795  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||||||||||||||||||||  ||||| |||||    
T  15726794 atcaaatatttcttataaataggatcggaggaagtat 15726758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 43332574 - 43332710
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagac-caaatacataatctatacaataaattaaaac 282  Q
    |||||||||||||| |||||||||||| ||||||||||||||| || |||| ||||||||||  ||||  ||| |||| || ||| |||| ||| ||||     
T  43332574 tatttataagaaaattttgactttttagattcattgagtaattaatatatcttgtctagaatgaagacaaaaaaacatcatttatgcaatgaatcaaaaa 43332673  T
Q  283 atttaaatatttcttataaataggactggagggagta 319  Q
    | | |||||||| ||||||||||||||||||||||||    
T  43332674 aatcaaatattttttataaataggactggagggagta 43332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 1223137 - 1223234
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    |||||||||||||||  |||||||||| |||||||| |||||| ||||||| |||| | ||||||||||||||||||||| ||| |||| ||||||||    
T  1223137 tatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatttatgcaatgaattaaaa 1223234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 174 - 318
Target Start/End: Complemental strand, 8453738 - 8453595
Alignment:
Q  174 tctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaata 273  Q
    ||||| ||| |||||||||||||||||||| |||||| || ||||||||||||||| |||| |||||||||||||||  |||||||| || |||  |||     
T  8453738 tctccgatcctatttataagaaaaatttgattttttagatacattgagtaattgatatatcttgtctagaatataga-taaatacattatttatgtaatg 8453640  T
Q  274 aattaaaacatttaaatatttcttataaataggactggagggagt 318  Q
    ||| |||| ||| |||| |||| ||||||||| || ||| |||||    
T  8453639 aatcaaaaaattcaaatgtttcctataaatagaaccggatggagt 8453595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 8803242 - 8803378
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||| |||||||| || |||||||| ||| |||  |||||| ||||||| ||||||||||||||||||||||||| || |||  ||| ||| |||| |    
T  8803242 tatttacaagaaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgtaatgaatcaaaaaa 8803341  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     |||||||||| ||||||||||||  ||||| |||||    
T  8803342 gttaaatattttttataaataggatcggaggaagtat 8803378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 10184694 - 10184555
Alignment:
Q  175 ctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatg-tctagaatatagaccaaatacataatctatacaata 273  Q
    |||| ||| ||||||||||||||| | ||||||||| ||||||||| |||||||||||| ||| || |||||||||||||||||||| || ||||||||     
T  10184694 ctccgatcatatttataagaaaaaatcgactttttagattcattgaataattgatgtat-atgatccagaatatagaccaaatacatcatttatacaatg 10184596  T
Q  274 aattaaaacatttaaatatttctt-ataaataggactggag 313  Q
    ||| |||| | | |||||||  || ||||||||||||||||    
T  10184595 aataaaaaaagtcaaatattaattaataaataggactggag 10184555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 176 - 320
Target Start/End: Original strand, 34711087 - 34711230
Alignment:
Q  176 tccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaa 275  Q
    |||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||  |||||| |||||| || |||||||| ||  || |||||||    
T  34711087 tccagtcttatttataaaaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaa 34711186  T
Q  276 ttaaaacatttaaatatttcttataaataggactggagggagtat 320  Q
    | |||| | || ||| ||| |||||||||| || |||| ||||||    
T  34711187 tcaaaaaagtt-aattttttttataaatagaaccggagagagtat 34711230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 167 - 319
Target Start/End: Complemental strand, 24619108 - 24618957
Alignment:
Q  167 tgtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtc-tagaatatagaccaaatacataatct 265  Q
    ||||||| ||||  || |||||||||||| || ||||||||| | ||||||||||||||| ||||| | |||  ||||||||||||||||||||| || |    
T  24619108 tgtactccctccggtcatatttataagaacaagttgactttt-agattcattgagtaattaatgta-cttgttatagaatatagaccaaatacatcattt 24619011  T
Q  266 atacaataaattaaaacatttaaatatttcttataaataggactggagggagta 319  Q
    || |||| ||| |||| | | |||  ||||||||||||||||||||||| ||||    
T  24619010 atgcaatgaatcaaaaaagtcaaaggtttcttataaataggactggaggtagta 24618957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 4156378 - 4156468
Alignment:
Q  168 gtactctctccaatcttatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||| ||||||||| |||||||||||||||  ||||||| ||| || |||||||||||||||||||| ||| |  |||||||||||||||    
T  4156378 gtactttctccaatcctatttataagaaaaaaattgacttgttagatacattgagtaattgatgtatcttgtttgaaatatagaccaaata 4156468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 44796356 - 44796491
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcat-gtctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| ||| | |||||| ||||||||||||||| | |||| |||| ||| ||||     
T  44796356 tatttataagaaaaagttaactttttagattcattcaataattgatgta-catagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaa 44796453  T
Q  283 atttaaatatttcttataaataggactggagggagtat 320  Q
    | | || | ||||||||| ||||||| |||||||||||    
T  44796454 agtaaattgtttcttatatataggaccggagggagtat 44796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 12958790 - 12958925
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  |  ||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  12958790 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 12958888  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | || | ||||||||| ||||||| |||||||||||    
T  12958889 gtaaattgtttcttatatataggaccggagggagtat 12958925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 6899434 - 6899568
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||| |||||| | ||||||| | ||||||||||| |    |||||| ||||| ||||||||| | |||| |||| ||| |||| |    
T  6899434 tatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaatgaatcaaaaaa 6899532  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | || | ||||||||| ||||||| ||||||||||    
T  6899533 gtaaattgtttcttatatataggaccggagggagta 6899568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 8793868 - 8793777
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||  || ||||||||||||| ||||||||||||  ||||||||  ||| ||||||||   ||||| | ||||||||||||||||    
T  8793868 tactctctccggtcctatttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacat 8793777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 32597635 - 32597584
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    |||||||||||||||||| || |||||| ||||||||||||||||| |||||    
T  32597635 tcttatttataagaaaaagttaacttttaaaattcattgagtaattaatgta 32597584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 36366158 - 36366024
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | ||||  ||| ||| |||| |    
T  36366158 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattgaatgaatcaaaaaa 36366060  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | || | ||||||||| ||||||| ||||||||||    
T  36366059 gtaaattgtttcttatatataggaccggagggagta 36366024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 42786375 - 42786511
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| || |||||||| ||||||| | |||||||||||    |  ||||| ||||||||||||||| | |||| |||||||| |||    
T  42786375 tcttatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcttagaa-atagaccaaatacattaactattcaataaatcaaa 42786473  T
Q  281 acatttaaatatttcttataaataggactggagggagta 319  Q
    | | | || | ||||||||| ||||||| ||||| ||||    
T  42786474 a-agtaaattgtttcttatatataggaccggaggaagta 42786511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 22429549 - 22429685
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||| ||| | ||||| ||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  22429549 tatttataagaaaaagttaattttttagatttattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 22429647  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  22429648 gtaaattgtttcttatatataggaccggagggagtata 22429685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 24177986 - 24178122
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | || |||||||| |  |  ||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  24177986 tatttataagaaaaagttaactttttagattcattcaatatttgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 24178084  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| |||| || ||||||||||||    
T  24178085 ataaactgtttcttatatatagaaccggagggagtata 24178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 24821981 - 24821904
Alignment:
Q  228 atgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatag 305  Q
    ||||||| ||||||||||||| |  |||||||| || |||  |||||||||||| | |||||| ||||||||||||||    
T  24821981 atgtatcttgtctagaatatatattaaatacattatttatgtaataaattaaaaaagttaaatgtttcttataaatag 24821904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 883758 - 883679
Alignment:
Q  178 caatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||| ||||||||||||||| ||||||||||| ||| |||| |||||| || |||  |||||| |||||| | ||||||    
T  883758 caatcatatttataagaaaaagttgactttttagattgattgtgtaattaatatattttgtctaaaatataaatcaaata 883679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 13831511 - 13831445
Alignment:
Q  168 gtactctctccaatcttatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtat 233  Q
    |||||| ||||| || |||||||||||||||  ||||||||||| ||||||| | ||||||||||||    
T  13831511 gtactccctccagtcctatttataagaaaaaaattgactttttagattcattaaataattgatgtat 13831445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 3236464 - 3236415
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||||| |||||||||||| |||||||||  ||| ||||||||    
T  3236464 tatttataagaaatatttgacttttttaattcattgtataaatgatgtat 3236415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 320
Target Start/End: Original strand, 28872158 - 28872267
Alignment:
Q  212 attcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttc-ttataaataggactg 310  Q
    |||||||||||| ||||||||||   |||||||||||||||| |||||| |  ||| |||| ||| |||| | | || |  ||| |||||||||||||||    
T  28872158 attcattgagtagttgatgtatccgctctagaatatagaccagatacattaattattcaatgaataaaaaaaatcaattgcttctttataaataggactg 28872257  T
Q  311 gagggagtat 320  Q
     |||||||||    
T  28872258 aagggagtat 28872267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 35011226 - 35011369
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | ||||| ||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  35011226 tatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 35011324  T
Q  284 tttaaatatttct--tataaataggactggagggagtatagtttt 326  Q
     | || | |||||  |||| ||||||| |||||||||||| ||||    
T  35011325 gtaaattgtttcttatatatataggaccggagggagtatattttt 35011369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 6354789 - 6354662
Alignment:
Q  176 tccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaa 275  Q
    ||||||| ||||||||||||| | || | |||||| ||||||||| ||||| ||||||    ||||||||||| | || |||||| |  ||| |||||||    
T  6354789 tccaatcctatttataagaaataattaattttttagattcattgaataatttatgtattcgatctagaatatatatcatatacattaattattcaataaa 6354690  T
Q  276 ttaaaacatttaaatatttcttataaata 304  Q
    | |||| | || | |||||||||||||||    
T  6354689 tcaaaa-aattcattatttcttataaata 6354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 7693032 - 7693096
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||| |||||||| ||||||||||||| |||| |||||||  ||||||||  ||| ||||||||    
T  7693032 tactccctccaatcctatttataagaaacattttacttttttgattcattgcataaatgatgtat 7693096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 30255783 - 30255823
Alignment:
Q  220 agtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||||||||||||| ||||||||||||| | |||||||||    
T  30255783 agtaattgatgtatcttgtctagaatatatatcaaatacat 30255823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 7e-35; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 185 - 308
Target Start/End: Complemental strand, 32457346 - 32457223
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacat 284  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| |||||||| || ||| |||| ||| |||| |     
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaag 32457247  T
Q  285 ttaaatatttcttataaataggac 308  Q
    | ||||||||||||||||||||||    
T  32457246 tcaaatatttcttataaataggac 32457223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 30761392 - 30761527
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| || |||| |||||||||||||||| ||||||||| | | | |||| ||| |||| |    
T  30761392 tatttataagaaacatttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtgcaatgaatcaaaaaa 30761491  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | |||| ||||||||||||||||| ||||||||||    
T  30761492 gtcaaatgtttcttataaataggaccggagggagta 30761527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 38983133 - 38982998
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||| ||||| |||| |||||| |||||||| |||||||||||||| |||||||||||||||| |||||||| || ||| |||| ||| |||| |    
T  38983133 tatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaaaaaa 38983034  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | |||||||| ||||||||||||| ||||||||||    
T  38983033 gtcaaatattttttataaataggaccggagggagta 38982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 33824351 - 33824484
Alignment:
Q  171 ctctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctataca 270  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||| |  ||||| || || ||||||    
T  33824351 ctctcttccatcttatttataagaaaaatttgactttttaaattcattgagtaattgatatatcttgtctaaaatatatattaaatatatcatttataca 33824450  T
Q  271 ataaattaaaacatttaaatatttcttataaata 304  Q
    || ||| | || | | ||||||||||||||||||    
T  33824451 atgaatcagaaaagtcaaatatttcttataaata 33824484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 30758853 - 30758730
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| | |||||||||||||||  || ||| |||| ||| |||| |    
T  30758853 tatttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttatgcaatgaataaaaaaa 30758755  T
Q  284 tttaaatatttcttataaataggac 308  Q
     | ||||||||||||||||||||||    
T  30758754 gtcaaatatttcttataaataggac 30758730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 165 - 305
Target Start/End: Complemental strand, 42698217 - 42698077
Alignment:
Q  165 aatgtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatc 264  Q
    ||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||  ||||||| |||||||| | || ||     
T  42698217 aatgtactccctccgatcatatttataaaaaaaatttgactttttagattcattgagtaattgatgtatcttgcttagaataaagaccaaacatattatt 42698118  T
Q  265 tatacaataaattaaaacatttaaatatttcttataaatag 305  Q
    ||||| || ||| |||| |  ||||||||||||||||||||    
T  42698117 tataccatgaataaaaaaagctaaatatttcttataaatag 42698077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 10204941 - 10205063
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||| ||| |||||||| |||||||||| |||||||||||| |||||| ||||||||| |||||||| || |||||||| ||| |||| |    
T  10204941 tatttataagaaaatttt-actttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatcaaaaga 10205039  T
Q  284 tttaaatatttcttataaatagga 307  Q
     | |||||||||||||||||||||    
T  10205040 gtcaaatatttcttataaatagga 10205063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 321
Target Start/End: Original strand, 29988902 - 29989043
Alignment:
Q  180 atcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaa 279  Q
    ||||||||||||| ||||| |||| |||||| |||||||| |||||| || |||  ||||||||||||||| ||||||||| || ||| |||| ||| ||    
T  29988902 atcttatttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaatcaa 29989001  T
Q  280 aacatttaaatatttcttataaataggactggagggagtata 321  Q
    || | | |||| |||||| |||||||||||||||||||||||    
T  29989002 aaaagtcaaatgtttcttctaaataggactggagggagtata 29989043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 35728599 - 35728475
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||| || || ||| |||| ||| |||| |    
T  35728599 tatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatgcaatgaatcaaaaaa 35728500  T
Q  284 -tttaaatatttcttataaatagga 307  Q
      | |||||||||||||||||||||    
T  35728499 gatcaaatatttcttataaatagga 35728475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 20555272 - 20555406
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| || |||||| ||||||||||||| ||||||||||||||||||||||||| || |||  ||| || ||||| |    
T  20555272 tatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatgaa-taaaaaa 20555370  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     |||||| |||| |||||||||||| ||||||||||    
T  20555371 gttaaatgtttcctataaataggaccggagggagta 20555406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 29169970 - 29169848
Alignment:
Q  183 ttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaatt-aaaa 281  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||  ||| ||||||||||| ||||||||| || || ||||| |||| ||||    
T  29169970 ttatttataagaaaaatttgactttttaaatttattgagtaattgatatat-ttgtttagaatatagatcaaatacatcatttagacaatgaattaaaaa 29169872  T
Q  282 catttaaatatttcttataaatag 305  Q
     | | |||||||||||||||||||    
T  29169871 aagtcaaatatttcttataaatag 29169848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 12962716 - 12962854
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||    || || |||||||||||||||||| || ||| |||| ||| |||    
T  12962716 tcttatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatcaaa 12962815  T
Q  281 acatttaaatatttcttataaataggactggagggagta 319  Q
    | | | |||| |||||||||||||||||  |||||||||    
T  12962816 aaagtcaaatgtttcttataaataggaccagagggagta 12962854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 188 - 305
Target Start/End: Original strand, 39445013 - 39445130
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacattta 287  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||  |||||||  || ||| ||||||||||||| | | |    
T  39445013 tataagaaaaatttgacttttaagattcattgagtaattgatgtattttgtctagaatatagattaaatacaccatttatgcaataaattaaaaaagtca 39445112  T
Q  288 aatatttcttataaatag 305  Q
    |  |||||||||||||||    
T  39445113 ataatttcttataaatag 39445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 43714107 - 43713971
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||  |||||||||||| ||| | ||||||||||||||||| |||||| ||||||||||||||||||||| ||| |||| ||| |||| |    
T  43714107 tatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtcta-aatatagaccaaatacataatttattcaatgaatcaaaaaa 43714009  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||||||| ||  ||||||||||||    
T  43714008 atcaattgtttcttataaataagagcggagggagtata 43713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 7943574 - 7943438
Alignment:
Q  184 tatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    |||||||||||||||  ||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||| || || ||| |||| ||| ||||     
T  7943574 tatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttatgcaatgaataaaaaa 7943475  T
Q  283 atttaaatatttcttataaataggactggagggagta 319  Q
    | | |||||| ||||||||||| ||| ||||| ||||    
T  7943474 agtcaaatatctcttataaataagaccggaggaagta 7943438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 301
Target Start/End: Complemental strand, 41153260 - 41153128
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||| |||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||   || || |||||||||||||||||| || |||     
T  41153260 tactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatg 41153161  T
Q  269 caataaattaaaacatttaaatatttcttataa 301  Q
    |||| ||| |||| | | |||| ||||||||||    
T  41153160 caatgaatcaaaaaagtcaaatgtttcttataa 41153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 9152516 - 9152377
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||||| |  |||  ||| | | |||    
T  9152516 tcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatgactcaaa 9152417  T
Q  281 acatttaaatatttcttataaataggactggagggagtat 320  Q
    | | | |||| |||||| |||||||||| |||||||||||    
T  9152416 aaagtcaaatgtttcttgtaaataggaccggagggagtat 9152377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 39118043 - 39118148
Alignment:
Q  199 tttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttctta 298  Q
    ||||| |||||| || ||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||| |||| | | || ||||| |||    
T  39118043 tttgaatttttagatccattgagtaattgatatatcttatctagaatatagaccaaatacataatttatacaataaatcaaaaaagtcaactatttttta 39118142  T
Q  299 taaata 304  Q
    ||||||    
T  39118143 taaata 39118148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 4410912 - 4410788
Alignment:
Q  184 tatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    |||||||||||||||  ||||||||||| |||||||| |||||| ||||||| ||| || |||||||| ||||||||| || ||| |||||||| ||||     
T  4410912 tatttataagaaaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatatagatcaaatacatcatttatgcaataaatcaaaaa 4410813  T
Q  283 atttaaatatttcttataaatagga 307  Q
      |||||| ||||||||||||||||    
T  4410812 ggttaaatgtttcttataaatagga 4410788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 38554592 - 38554468
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||||||||||||||||||| |||||    || ||||||||||||||||||||| || |||  ||| ||| |||| |    
T  38554592 tatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatgaatcaaaata 38554493  T
Q  284 tttaaatatttcttataaataggac 308  Q
     | |||| |||||||||||||||||    
T  38554492 gtcaaatgtttcttataaataggac 38554468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 304
Target Start/End: Original strand, 5109362 - 5109497
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||||||||  || ||||||||||||||| || |||||||| ||||||||||||||| ||||||   || |||||||||| | ||||||||||| ||||    
T  5109362 tactctctccggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataatttata 5109461  T
Q  269 caataaattaaaacatttaaatatttcttataaata 304  Q
    |  | ||| |||| | | ||||||||||||||||||    
T  5109462 ctttgaatcaaaaaagtcaaatatttcttataaata 5109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 11030326 - 11030203
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| |||||||||||||||||||||||   | ||||||||||||||||||||| || |||  ||| ||| |||| |    
T  11030326 tatttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaa 11030227  T
Q  284 tttaaatatttcttataaatagga 307  Q
     | |||| ||||||||| ||||||    
T  11030226 gtcaaatgtttcttatatatagga 11030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 28249067 - 28248946
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||||| ||||||| | ||||| ||||||   || |||||||||||| |||||||| || ||| |||| ||| |||| |    
T  28249067 tatttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaa 28248968  T
Q  284 tttaaatatttcttataaatag 305  Q
     | |||||||||||||||||||    
T  28248967 gtcaaatatttcttataaatag 28248946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 34447637 - 34447514
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||| |||||||| |||||  ||||||| |||||| |||||| ||||||||||| || ||| |||| || ||||| |    
T  34447637 tatttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgtctaaaatataaaccaaatacattatttatgcaatgaactaaaaaa 34447538  T
Q  284 tttaaatatttcttataaataggac 308  Q
     | |||| |||||||||||||||||    
T  34447537 gtcaaat-tttcttataaataggac 34447514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45571044 - 45571180
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45571044 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45571142  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45571143 gtaaattgtttcttatatataggaccggagggagtata 45571180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45574711 - 45574847
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45574711 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45574809  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45574810 gtaaattgtttcttatatataggaccggagggagtata 45574847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45578378 - 45578514
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45578378 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45578476  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45578477 gtaaattgtttcttatatataggaccggagggagtata 45578514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45582045 - 45582181
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45582045 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45582143  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45582144 gtaaattgtttcttatatataggaccggagggagtata 45582181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45585712 - 45585848
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45585712 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45585810  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45585811 gtaaattgtttcttatatataggaccggagggagtata 45585848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45589379 - 45589515
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45589379 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45589477  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45589478 gtaaattgtttcttatatataggaccggagggagtata 45589515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45593046 - 45593182
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45593046 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45593144  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45593145 gtaaattgtttcttatatataggaccggagggagtata 45593182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45596713 - 45596849
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45596713 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45596811  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45596812 gtaaattgtttcttatatataggaccggagggagtata 45596849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45600380 - 45600516
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45600380 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45600478  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45600479 gtaaattgtttcttatatataggaccggagggagtata 45600516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45604047 - 45604183
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45604047 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45604145  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45604146 gtaaattgtttcttatatataggaccggagggagtata 45604183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45607714 - 45607850
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45607714 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45607812  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45607813 gtaaattgtttcttatatataggaccggagggagtata 45607850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45611381 - 45611517
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45611381 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45611479  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45611480 gtaaattgtttcttatatataggaccggagggagtata 45611517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 45615048 - 45615184
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45615048 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45615146  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| ||||||||||||    
T  45615147 gtaaattgtttcttatatataggaccggagggagtata 45615184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 5559377 - 5559425
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5559377 tatttataagaaaaatttgactttttagattcattgagtaattgatgta 5559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 169 - 304
Target Start/End: Original strand, 12873722 - 12873857
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||| |||| ||| | ||||||||||||| ||||||||||| ||||||| ||||||| ||||||   || |||||||||||| |||||||| || |||     
T  12873722 tactccctccgatcctttttataagaaaaagttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttatg 12873821  T
Q  269 caataaattaaaacatttaaatatttcttataaata 304  Q
    |||| ||| || | | | |||||||| |||||||||    
T  12873822 caatgaatcaataaagtcaaatattttttataaata 12873857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 3838551 - 3838415
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | | |||||||||    |||||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  3838551 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacttcgtctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 3838453  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||||||||| ||||||    
T  3838452 gtaaattgtttcttatatataggactggaggaagtata 3838415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 36881547 - 36881677
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||| |      |||||||||||||| ||| || |||  ||| ||| |||| |    
T  36881547 tatttataagaaaaatttgactttttagatacattgagtaattaatgtatctt------aatatagaccaaattcattatttatgtaatgaatcaaaaaa 36881640  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| |||||| ||||||||||| || |||||||    
T  36881641 gtcaaatgtttcttgtaaataggactagatggagtat 36881677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 320
Target Start/End: Complemental strand, 33274103 - 33273968
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacat 284  Q
    |||||||| | || ||| |||||||| ||||||| ||||||||||||||  |||||| ||||||  ||||||| || || |||||||| ||| |||| |     
T  33274103 atttataaaagaacttttactttttagattcattaagtaattgatgtatgttgtctaaaatataagccaaatatatcatttatacaatgaatcaaaaaag 33274004  T
Q  285 ttaaatatttcttataaataggactggagggagtat 320  Q
    | |||  |||||||||||||| |  |||||||||||    
T  33274003 tcaaagttttcttataaatagaatcggagggagtat 33273968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 45034412 - 45034546
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| | ||||||||||| |    |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  45034412 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 45034510  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | || | ||||||||| ||||||| ||||||||||    
T  45034511 gtaaattgtttcttatatataggaccggagggagta 45034546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 28014297 - 28014410
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatt 293  Q
    ||||| ||||||||||| ||||||||  |||||  |||||| |||||| | |||||||||||||||| || ||| |||| ||| ||||   | |||| ||    
T  28014297 aaaaaattgactttttagattcattgtataattattgtatcttgtctatagtatagaccaaatacatcatttatgcaatgaataaaaaaggtcaaatgtt 28014396  T
Q  294 tcttataaatagga 307  Q
    ||||||||||||||    
T  28014397 tcttataaatagga 28014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 4063286 - 4063421
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | ||||||||||| |   ||||||| |||||| |||||||| | |||| |||| ||| |||| |    
T  4063286 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaa-atagacaaaatacatcaactattcaatgaatcaaaaaa 4063384  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | || | ||||||||| ||||||| |||||||||||    
T  4063385 gtaaattgtttcttatatataggaccggagggagtat 4063421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 28494757 - 28494839
Alignment:
Q  223 aattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatag 305  Q
    |||||||||||  |||||||||||||||||||||| || || ||| |||| ||| |||| | | |||| ||||||||||||||    
T  28494757 aattgatgtatattgtctagaatatagaccaaatatatcatttatgcaatgaatcaaaaaaatcaaatgtttcttataaatag 28494839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 3837513 - 3837428
Alignment:
Q  215 cattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttata 300  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||| || ||| |||| ||| |||| | | |||| |||||||||    
T  3837513 cattgagtaattgatctatcttgtttaaaatatagaccaaatacattatttatgcaatgaatcaaaaaaatcaaatgtttcttata 3837428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 2936335 - 2936430
Alignment:
Q  212 attcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatagga 307  Q
    ||||||||||||||| |||||    || |||||||||||| ||||| || |||||| |||| ||| |||| | | |||| ||||||||||||||||    
T  2936335 attcattgagtaattaatgtacttggtatagaatatagactaaatatatcatctatccaatgaatcaaaaaagtcaaatgtttcttataaatagga 2936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 21425051 - 21424988
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    ||||||||||||||||  ||||||||||   ||||| ||||| ||| |||||||||||||||||    
T  21425051 tactctctccaatctttattataagaaacgattgacattttagattaattgagtaattgatgta 21424988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 3037741 - 3037817
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagta--attgatgtatcatgtctagaatatagaccaaatacataa 262  Q
    ||||||||| |  |||||||||| || |||||| ||  |||||||||||  |||||||||||| |||||||||||||    
T  3037741 tataagaaacaaatgactttttagatacattgaatataattgatgtatccggtctagaatatacaccaaatacataa 3037817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 12486126 - 12486077
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    |||||| |||||| | ||||||||||| ||||||||| ||||||||||||    
T  12486126 tatttacaagaaacaattgactttttagattcattgaataattgatgtat 12486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 22857803 - 22857896
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataa 262  Q
    ||||| |||| ||||||  || |||||| | ||||||||||| || |||||| ||||| |||||||   |||||||| || |||||||||||||    
T  22857803 tactccctccgatcttaaatacaagaaacaattgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataa 22857896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 37670348 - 37670429
Alignment:
Q  200 ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    ||||||||||| ||  ||||| ||||||||| ||| | ||||||||||| |||||||| || || ||| |||| ||||||||    
T  37670348 ttgactttttagatatattgaataattgatgcatcttatctagaatatataccaaatagattatttatgcaatgaattaaaa 37670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 43893962 - 43894027
Alignment:
Q  243 aatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaataggac 308  Q
    ||||||||||||||||||||  ||| |||||||| |||||| | ||||| ||||| ||||| ||||    
T  43893962 aatatagaccaaatacataaattattcaataaatcaaaacaatcaaataattcttgtaaattggac 43894027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 22101921 - 22102058
Alignment:
Q  183 ttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    ||||||||||||||||||||| |||||| |||||||| |||||| ||||||| |||||| |||||||| ||||||||| || |||||||||||| ||||     
T  22101921 ttatttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaa 22102020  T
Q  283 atttaaatatttcttataaataggactggagggagtat 320  Q
    | | |||||||||||||||||| ||  |||||||||||    
T  22102021 agtcaaatatttcttataaatatgatcggagggagtat 22102058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 18473480 - 18473613
Alignment:
Q  175 ctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataa 274  Q
    ||||| || ||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||| || |||||||| |    
T  18473480 ctccattcctatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatga 18473579  T
Q  275 attaaaacatttaaatatttcttataaataggac 308  Q
    || |||| | | |||| |||||||||||||||||    
T  18473580 atcaaaaaagtcaaatgtttcttataaataggac 18473613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 21488433 - 21488281
Alignment:
Q  168 gtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctat 267  Q
    |||||| |||| ||| ||||||||||||||| || | |||||||| |||||  |||||| ||||||  ||||||||||||||||||||||||| || |||    
T  21488433 gtactccctccgatcctatttataagaaaaagttaattttttaaactcattatgtaattaatgtattttgtctagaatatagaccaaatacattatttat 21488334  T
Q  268 acaataaattaaaacatttaaatatttcttataaataggactggagggagtat 320  Q
     |||| |||||||| | | ||||||||||||||||||||||  ||||||||||    
T  21488333 gcaatgaattaaaaaagtcaaatatttcttataaataggacatgagggagtat 21488281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 29299371 - 29299508
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaatt-aaaac 282  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||||||  |||||| |||||||||| ||||||| || |||||||| |||| ||||     
T  29299371 tatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttatacaatgaattcaaaaa 29299470  T
Q  283 atttaaatatttcttataaataggactggagggagtat 320  Q
    | | |||| |||||||||| |||||| |||||||||||    
T  29299471 agtcaaatgtttcttataactaggaccggagggagtat 29299508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 5002274 - 5002142
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||| ||| |||||||| ||| ||||||||||||||||||| |||||| |||||||| ||||||||| || ||| |||| ||| |||| |    
T  5002274 tatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaattaatcaaaaaa 5002175  T
Q  284 tttaaatatttcttataaataggactggaggga 316  Q
     | |||| ||||||||||||||||| |||||||    
T  5002174 gtcaaatgtttcttataaataggaccggaggga 5002142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 11931983 - 11932119
Alignment:
Q  184 tatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    |||||||||||||||  ||||||||||| |||||||| |||||| ||||||| |||||| |||||||||||||||||| || |||| ||||||| ||||     
T  11931983 tatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttatataataaatcaaaaa 11932082  T
Q  283 atttaaatatttcttataaataggactggagggagta 319  Q
    | |||||| |||||| |||||||||| ||||| ||||    
T  11932083 aattaaatgtttcttttaaataggaccggaggaagta 11932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 451
Target Start/End: Complemental strand, 33866944 - 33866825
Alignment:
Q  334 aaatataagtttattcgtttataaagtgtaagcttagtagtatg-agcttgttttgtaatctgaagggtcaaaa-tccaaattttctcaaagatgggtgt 431  Q
    |||| |||||||||| ||| ||||||||||||||||| || ||| || |||||||||||||||||||||||||| | ||||||||||| ||||| |||||    
T  33866944 aaatgtaagtttatttgttcataaagtgtaagcttagcagcatggagtttgttttgtaatctgaagggtcaaaaattcaaattttctcgaagattggtgt 33866845  T
Q  432 gaaaatgaccaatatataat 451  Q
    ||||| ||||||||||||||    
T  33866844 gaaaaagaccaatatataat 33866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 194 - 320
Target Start/End: Original strand, 33478131 - 33478257
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatt 293  Q
    |||||||||| |||||| |||||||||||||||||||||||  ||||||||||||| |||||||||| || ||| |||| ||| ||||   | |||| ||    
T  33478131 aaaaatttgaatttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcatttatgcaatgaatcaaaaatgtcaaatgtt 33478230  T
Q  294 tcttataaataggactggagggagtat 320  Q
    ||||||||||||||| |||||||||||    
T  33478231 tcttataaataggaccggagggagtat 33478257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 181 - 313
Target Start/End: Original strand, 16619028 - 16619161
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaa-attcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaa 279  Q
    ||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||| |||||||||| || || ||| |||||||| ||    
T  16619028 tcttatttataagaaaaatttgatttttttagattcgttgagtaattgatgtatcatgtctagaatagagaccaaatatatcatttatgcaataaatcaa 16619127  T
Q  280 aacatttaaatatttcttataaataggactggag 313  Q
    ||   | || ||||||||||||||| ||| ||||    
T  16619128 aaacgtcaactatttcttataaatatgaccggag 16619161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 36286178 - 36286061
Alignment:
Q  199 tttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttctta 298  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||| ||| |||| | | || |||||||||    
T  36286178 tttgactttttagattaattgagtaattgatgtatcatgtctagaatatagaccaactacatcatttatgcaatgaatcaaaaaaatcaagtatttctta 36286079  T
Q  299 taaataggactggaggga 316  Q
    ||||||| | ||||||||    
T  36286078 taaatagaattggaggga 36286061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 162 - 319
Target Start/End: Complemental strand, 34297333 - 34297173
Alignment:
Q  162 tttaatgtactctctccaatcttatttataagaaaaat---ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatac 258  Q
    |||||| ||||| |||| ||| ||||||||| ||||||   ||||||||||| ||||||| |||||||||||| || |||||| |||||||| ||| |||    
T  34297333 tttaatatactccctccgatcctatttataaaaaaaataaattgactttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattac 34297234  T
Q  259 ataatctatacaataaattaaaacatttaaatatttcttataaataggactggagggagta 319  Q
    || || ||| |||| |||||||| | | |||||||||||||||||| ||| ||| ||||||    
T  34297233 atcatttatgcaatgaattaaaaaagtcaaatatttcttataaataagaccggatggagta 34297173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 18718252 - 18718325
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    |||||||||||||||||| || ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  18718252 tatttataagaaaaatttaacattttaaatttattgagtaattaatgtatcttgtctagaatatagaccaaata 18718325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 13789866 - 13789730
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||||||||| | ||||||||| ||||| |||||    || |||||| |||||||||||||| || ||| |||| ||| |||| |    
T  13789866 tatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaaa 13789767  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||||||||| |||||||||||    
T  13789766 gtaaaatgtttcttataaataggaccggagggagtat 13789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 169 - 321
Target Start/End: Original strand, 38394427 - 38394579
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctata 268  Q
    ||||| |||| ||| ||||||||||||||| ||||||||||| ||||||||| ||||| |||||    || |||||| |||||||||||||| || |||     
T  38394427 tactccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatg 38394526  T
Q  269 caataaattaaaacatttaaatatttcttataaataggactggagggagtata 321  Q
    |||| ||| |||| | | |||| ||||||||||||||||  | ||||||||||    
T  38394527 caatgaatcaaaaaagtaaaatgtttcttataaataggatcgaagggagtata 38394579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 36434813 - 36434739
Alignment:
Q  183 ttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||| |||||| ||||||||    
T  36434813 ttatttataagaaaaatttaactttttagattcattaagtaattgatgtatcttgtctaaaatataaaccaaata 36434739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 313
Target Start/End: Complemental strand, 1138367 - 1138223
Alignment:
Q  168 gtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctat 267  Q
    |||||| |||| ||| ||||||||||||||| |||| |||||||||||||| | ||||| |||||||  | |||||| ||||||||||||||| |  |||    
T  1138367 gtactccctccgatcatatttataagaaaaaattgattttttaaattcattaaataattaatgtatctagactagaa-atagaccaaatacattaattat 1138269  T
Q  268 acaataaattaaaacatttaaatatttcttataaataggactggag 313  Q
     |||||||| |||| | | || | ||||||||||||||||| ||||    
T  1138268 tcaataaatcaaaaaagtaaattgtttcttataaataggaccggag 1138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 14723410 - 14723476
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    ||||| || ||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||    
T  14723410 aaaaaattaactttttaaattcattgagtaattgatatatctaatctagaatatagaccaaatacat 14723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 919754 - 919641
Alignment:
Q  206 ttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatag 305  Q
    ||||| |||||||||||||||||||||||  || ||||||||||||||||||||| || |||  ||| ||| |||| | | ||||||||| |||| |||     
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagtcaaatatttcctatatatat 919655  T
Q  306 gactggagggagta 319  Q
    ||| ||| ||||||    
T  919654 gaccggatggagta 919641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 14913240 - 14913164
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||||||||||||||| |||||||||||||||||||||| || |||    | || ||||||||||||||||||    
T  14913240 tatttataagaaaaatttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacat 14913164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 32452346 - 32452287
Alignment:
Q  200 ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaataca 259  Q
    ||||||||||| |||||||| |||||| ||||| | ||||||||||||||||||||||||    
T  32452346 ttgactttttatattcattgcgtaattaatgtagcttgtctagaatatagaccaaataca 32452287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 32902905 - 32902778
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||| || |||    | || ||||||||| ||||| || || |||||||| ||| |||    
T  32902905 tcttatttataagaaaaaattgtctttttaaattcattgaataattaatatattcgatatataatatagactaaatatattatttatacaattaatcaaa 32902806  T
Q  281 acatttaaatatttcttataaataggac 308  Q
    |   |||| | |||||||||||||||||    
T  32902805 aaggttaattgtttcttataaataggac 32902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 8511517 - 8511460
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtcta 241  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||| ||||| ||||||    
T  8511517 tatttagaagaaaattttgactttttagattcattgagtaattgacgtatcttgtcta 8511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 15968325 - 15968461
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | ||||| |||||||  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  15968325 tatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 15968423  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| |||||||  |||||||||||    
T  15968424 gtaaattgtttcttatatataggacctgagggagtata 15968461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 3814108 - 3814008
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||| ||||||||||||| ||||||||||| |||| |||| ||||| |||||    || |||||||||||| |||||||| || ||| |||||||| |||    
T  3814108 tcttgtttataagaaaaaattgactttttagattcgttgaataattaatgtacttggtatagaatatagactaaatacattatttatgcaataaataaaa 3814009  T
Q  281 a 281  Q
    |    
T  3814008 a 3814008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 26327546 - 26327685
Alignment:
Q  181 tcttatttataagaaaaat-ttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaa 279  Q
    ||||||||||||||||||  || |||||||| ||||||| | ||||||||||| |   |||| || ||||||||||||||| | |||| |||||||| ||    
T  26327546 tcttatttataagaaaaaaattaactttttagattcattcaataattgatgtacctaatctaaaa-atagaccaaatacatcaactattcaataaatcaa 26327644  T
Q  280 aacatttaaatatttcttataaataggactggagggagtat 320  Q
    || | | || | ||||||||| |||| || |||||||||||    
T  26327645 aaaagtaaattctttcttatatatagaaccggagggagtat 26327685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 29031170 - 29031035
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || |||||||| ||||||| |  |||||||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  29031170 tatttataagaaaaagttaactttttagattcattcaacaattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 29031072  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | || | ||||||||| ||| ||| |||||||||||    
T  29031071 gtaaattgtttcttatatataagaccggagggagtat 29031035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 22731392 - 22731258
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | ||||| ||||| |  | |||||| ||||||||||||||| | |||| |||| ||| |||| |    
T  22731392 tatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 22731294  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | || | ||||||||| ||||||| ||||||||||    
T  22731293 gtaaattgtttcttatatataggaccggagggagta 22731258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 321
Target Start/End: Original strand, 1248883 - 1248981
Alignment:
Q  224 attgatgtatcatgtctagaatatagaccaaatacataatctatacaataaat-taaaacatttaaatatttcttataaataggactggagggagtata 321  Q
    ||||||||||| ||||||||||||||| ||||||||| || |||  ||| |||  |||| | |||||| ||||||||||||||||| | ||| ||||||    
T  1248883 attgatgtatcttgtctagaatatagatcaaatacatcatttatcaaatgaataaaaaaaagttaaatgtttcttataaataggaccgaaggtagtata 1248981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 13665073 - 13664943
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||| ||||||||||   | ||||||||||||||  ||||    ||| ||||||||||| ||||||||| || ||| |||| |||||||| |    
T  13665073 tatttataagaacaatttgactt---agattcattgagtaatgtatgt----tgtttagaatatagatcaaatacatcatttatgcaattaattaaaaaa 13664981  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | |||| ||||||||||||| ||| ||| | ||||||    
T  13664980 gtcaaatgtttcttataaatatgaccggatgaagtata 13664943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 27488361 - 27488497
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| || | |||||| ||||||| | |||||||||||||  | |||||| |||||||||||| || | ||||  ||| ||| |||| |    
T  27488361 tatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaa-atagaccaaatatatcaactattgaatgaatcaaaaaa 27488459  T
Q  284 tttaaatatttcttataaataggactggagggagtata 321  Q
     | || | ||||||||| ||||||| |||| |||||||    
T  27488460 gtaaattgtttcttatatataggaccggagagagtata 27488497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 35349546 - 35349497
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    |||||||| ||| | ||||||||||| |||||||||||||||||||||||    
T  35349546 atttataaaaaataattgactttttagattcattgagtaattgatgtatc 35349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 10228087 - 10228216
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtatcatgtctaga----atatagaccaaatacataatctatacaataaattaaaacatttaaa 289  Q
    ||||| || |||||||| ||| |||||  |||||||||||| ||||||||    |||||||| | |||||| || |||||||| ||| |||| | | |||    
T  10228087 aaaaaattaactttttagatttattgaacaattgatgtatcttgtctagaatatatatagacgagatacatcatttatacaatgaatcaaaaaagtcaaa 10228186  T
Q  290 tatttcttataaataggactggagggagta 319  Q
    | ||||| ||||||| ||| ||||||||||    
T  10228187 tgtttctaataaataagaccggagggagta 10228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 480
Target Start/End: Complemental strand, 33866529 - 33866497
Alignment:
Q  448 taatgccactttattaataatatttcacttgct 480  Q
    |||||||||||||||||||||||||||||||||    
T  33866529 taatgccactttattaataatatttcacttgct 33866497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 320
Target Start/End: Complemental strand, 8235512 - 8235382
Alignment:
Q  183 ttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    |||||||||||||||| |||| |||||| ||| ||||| ||||| || |||   ||||| |||||| | ||||||||| || |||| |||||||          
T  8235512 ttatttataagaaaaaattgattttttagatttattgaataattaatatatttggtctataatataaatcaaatacatcatttatataataaat------ 8235419  T
Q  283 atttaaatatttcttataaataggactggagggagtat 320  Q
      | |||||||||| ||||||||||| |||||||||||    
T  8235418 -gtcaaatatttctcataaataggaccggagggagtat 8235382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 19211297 - 19211344
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||||||||  |||||||||||| ||||||||||||||| |||||||    
T  19211297 ttataagaaacttttgactttttatattcattgagtaattaatgtatc 19211344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 34297185 - 34297236
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgta 232  Q
    |||||||||||||||| |||||||||||| |||||||||  ||| |||||||    
T  34297185 tcttatttataagaaatatttgacttttttaattcattgcataaatgatgta 34297236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 6604455 - 6604414
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaatt 226  Q
    |||||||||||| | ||||||||||||||||||||| |||||    
T  6604455 atttataagaaacaattgactttttaaattcattgaataatt 6604414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 10228220 - 10228151
Alignment:
Q  165 aatgtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatc 234  Q
    ||||||||| ||||  |||||||||| ||||| ||||||||||||  ||||||||  ||| |||||||||    
T  10228220 aatgtactccctccggtcttatttattagaaacatttgacttttttgattcattgtataaatgatgtatc 10228151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 38362393 - 38362466
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    |||||||||||||| ||| |||||||| ||| | |||  |||||||||||| | |||| ||||||||| |||||    
T  38362393 tatttataagaaaattttaactttttagattaactgaaaaattgatgtatcttatctaaaatatagactaaata 38362466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 1420769 - 1420713
Alignment:
Q  206 ttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataa 262  Q
    ||||||||| ||| | ||||||||||||| | |||| | ||||||||||||||||||    
T  1420769 ttttaaatttatttaataattgatgtatcttatctatattatagaccaaatacataa 1420713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 28630767 - 28630893
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| |||| |||  ||| |    
T  28630767 tatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatctaaaaa 28630866  T
Q  284 tttaaatatttcttataaataggactg 310  Q
     | || | |||||||||||||||||||    
T  28630867 gtcaattgtttcttataaataggactg 28630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 17265855 - 17265719
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| |||||| | || ||| |||| ||| |||| |    
T  17265855 tatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatcaaaaaa 17265756  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||||||||  ||| |||||||    
T  17265755 gtcaaatgtttcttataaataggatcggaaggagtat 17265719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 181 - 305
Target Start/End: Original strand, 30627834 - 30627958
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||| || ||| |||| ||| | |    
T  30627834 tcttatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatcaga 30627933  T
Q  281 acatttaaatatttcttataaatag 305  Q
    | | | |||| ||||||||||||||    
T  30627934 aaagtcaaatgtttcttataaatag 30627958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 8052869 - 8053005
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaatt-gatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaac 282  Q
    |||||||||||||| ||||||||||||||| |||||| || || |||||||| ||||||||||| |||| |||||||| || | |||||| ||||||||     
T  8052869 tatttataagaaaattttgactttttaaatgcattgaatattttgatgtatcttgtctagaataaagactaaatacattatttgtacaatgaattaaaaa 8052968  T
Q  283 atttaaatatttcttataaataggactggagggagta 319  Q
    | | |||||||||||||||||| ||| ||||| ||||    
T  8052969 agtcaaatatttcttataaatatgaccggaggaagta 8053005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 2230483 - 2230407
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  2230483 tatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacat 2230407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 3064897 - 3065033
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| ||  ||||||| ||||||||  ||||| ||||||| ||| || |||||||||||||||||  || ||| |||| ||| |||| |    
T  3064897 tatttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaatcaaaaaa 3064996  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||||||||||||||||||||| |||||||||||    
T  3064997 gtaaaatatttcttataaataggaccggagggagtat 3065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 28863337 - 28863470
Alignment:
Q  187 ttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacattt 286  Q
    |||||||| ||| |||| ||||||  |||||||  ||||| ||||||| ||||||||||||| ||||||||||| || ||| |||||||| |||  ||||    
T  28863337 ttataagataaaattgattttttagtttcattgtataatttatgtatcttgtctagaatataaaccaaatacatcatttatgcaataaatcaaagaattt 28863436  T
Q  287 aaatatttcttataaataggactggagggagtat 320  Q
    |||| |||||||||||||| || ||| |||||||    
T  28863437 aaatgtttcttataaatagaaccggatggagtat 28863470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 33120036 - 33119903
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||||||| |||||||||||| ||||||||| |||| |||||||| ||||   |||||||||||||||||  || |||||||| ||| |||  |    
T  33120036 tatttataagaaaattttgactttttagattcattgaataatcgatgtatcttgtc--aaatatagaccaaatacaacatttatacaatgaatcaaagaa 33119939  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     | |||| ||||||||||||||||| | ||||||||    
T  33119938 gtcaaatgtttcttataaataggaccgaagggagta 33119903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 2972175 - 2972275
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||||| |||||| | |||| ||||||||| |||||||| || ||| |||| ||| |||    
T  2972175 tcttatttataagagaaatttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaatcaaa 2972274  T
Q  281 a 281  Q
    |    
T  2972275 a 2972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 9077624 - 9077732
Alignment:
Q  208 ttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatagga 307  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| ||| || ||| |||| ||| |||| | | |||||||||||||||||| ||    
T  9077624 ttaaatttattgtgtaattaatgtatcttgtctagaatatagaccaaatgcatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaataaga 9077723  T
Q  308 ctggaggga 316  Q
    | |||||||    
T  9077724 ccggaggga 9077732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 10283428 - 10283308
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    |||||||||| |||| || | |||||||||| ||||||||||||||||||  |||||| |||||| | ||||||||| || ||||| || ||| |||| |    
T  10283428 tatttataagcaaaaattaattttttaaatttattgagtaattgatgtatactgtctaaaatatatatcaaatacatcatttataccatgaatcaaaaaa 10283329  T
Q  284 tttaaatatttcttataaata 304  Q
     | |||||||| |||||||||    
T  10283328 gtcaaatattttttataaata 10283308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 27909004 - 27909124
Alignment:
Q  200 ttgactttttaaattca-ttgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttctta 298  Q
    ||||||||||| ||||| ||||||||||||||||||  ||||| |||||||| ||||||||| |  ||| |||| |||||||| | | |||| ||||||     
T  27909004 ttgactttttagattcaattgagtaattgatgtatccggtctaaaatatagatcaaatacatcaattattcaatgaattaaaaaagtcaaatgtttcttg 27909103  T
Q  299 taaataggactggagggagta 319  Q
    ||||||||||  |||||||||    
T  27909104 taaataggaccagagggagta 27909124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 30895198 - 30895334
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| |||| |||||||||||||||   |||| |||||    || |||||||||||||||||| || || ||| |||| ||| |||| |    
T  30895198 tatttataagaaaaagttgaatttttaaattcattggacaattaatgtacttggtatagaatatagaccaaatatatcatttatgcaatgaatcaaaaaa 30895297  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | |||| ||||||||||||| ||||||| |||||||    
T  30895298 gtcaaatgtttcttataaataagactggatggagtat 30895334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 12450366 - 12450484
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacat 284  Q
    ||||||||||||  ||| |||||||  ||||||||| ||||||||||||  | |||| ||||||||  |||||||| || ||| |||| |||||||| |     
T  12450366 atttataagaaatgtttaactttttggattcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaattaaaaaag 12450465  T
Q  285 ttaaatatttcttataaat 303  Q
    | |||||||||||||||||    
T  12450466 tcaaatatttcttataaat 12450484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 1158379 - 1158303
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||| |||||| | |||||||||||||| |||||| ||||||||||||   |||||||||||||||| |||||||    
T  1158379 tatttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacat 1158303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 2810093 - 2810228
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||| ||||| || | |||||| ||||||| | ||||||||||| |  |||||||| |||| |||||||||| | |||| |||| ||| |||| |    
T  2810093 tatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaa-atagtccaaatacatcaactattcaatgaatgaaaaaa 2810191  T
Q  284 tttaaatatttcttataaataggactggagggagtat 320  Q
     | || ||||||||||| ||||||| |||||||||||    
T  2810192 gtaaattatttcttatatataggaccggagggagtat 2810228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 304
Target Start/End: Complemental strand, 12999905 - 12999769
Alignment:
Q  169 tactctctccaatcttatttataagaaaaatttgacttttt-aaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctat 267  Q
    ||||| |||| |||||||||||||| |||| |||||||||| | ||||||||||||||| |||||    || ||||||||||| |||||||||  | |||    
T  12999905 tactccctccgatcttatttataagtaaaagttgactttttcagattcattgagtaattaatgtacttggtatagaatatagatcaaatacatcttttat 12999806  T
Q  268 acaataaattaaaacatttaaatatttcttataaata 304  Q
     |||| ||| |||| | |||||| |||||| ||||||    
T  12999805 gcaatgaatcaaaaaagttaaatgtttcttgtaaata 12999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 17706005 - 17705929
Alignment:
Q  175 ctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagac 251  Q
    |||| ||||||||||||||||||| |||||||||| |||| |||| || ||||||||||| ||| || |||||||||    
T  17706005 ctccgatcttatttataagaaaaaattgactttttgaattgattgcgtgattgatgtatcttgtttaaaatatagac 17705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 27909109 - 27909060
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    |||||| |||||| |||||||||||| |||||||||| ||||||||||||    
T  27909109 tatttacaagaaacatttgacttttttaattcattgaataattgatgtat 27909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 25538006 - 25538045
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  25538006 aaaaaattgactttttagattcattgagtaattgatgtat 25538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 7257484 - 7257415
Alignment:
Q  163 ttaatgtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||||||| |||  ||| ||||||||| | ||| ||||||||||||||||||||| ||||| ||||||    
T  7257484 ttaatgtactc-ctctgatcctatttataaaataaaattgactttttaaattcattgaataattaatgtat 7257415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 8030168 - 8030218
Alignment:
Q  183 ttatttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    ||||||| |||||| |||||||||||||||||||||||  |||| ||||||    
T  8030168 ttatttacaagaaatatttgactttttaaattcattgaacaattaatgtat 8030218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 10753637 - 10753706
Alignment:
Q  188 tataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||| |||||| ||||||||||| |||||||||||||| |||||||   ||||   |||||||||||||||||    
T  10753637 tatatgaaaaagttgactttttatattcattgagtaatcgatgtatttggtct---atatagaccaaatacat 10753706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 5483988 - 5483871
Alignment:
Q  191 aagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaat 290  Q
    |||||| | ||||||||||| |||| |||| ||||| ||||||   ||||| ||||||||| |||||||| |  |||  |||||||| ||| | | ||||    
T  5483988 aagaaacaattgactttttagattcgttgaataattaatgtatttagtctaaaatatagacaaaatacatcaattatttaataaatttaaaaagtcaaat 5483889  T
Q  291 atttcttataaataggac 308  Q
    |||| || ||||||||||    
T  5483888 atttattgtaaataggac 5483871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 5483875 - 5483951
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||| || ||| ||||||||||||||||| ||| | ||||||||||||  |||||| | | ||||| ||||||||    
T  5483875 tatttacaataaatatttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacat 5483951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 7649810 - 7649886
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaata 257  Q
    |||||||||||| ||| | ||  ||||||| ||||||||| ||||||||||||   ||||| |||||| ||||||||    
T  7649810 tcttatttataataaataattatctttttagattcattgaataattgatgtatttggtctaaaatatataccaaata 7649886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 12450484 - 12450436
Alignment:
Q  185 atttataagaaaaatttgactttttaaattcattgagtaattgatgtat 233  Q
    |||||||||||| |||||||||||| |||||||||  ||| ||||||||    
T  12450484 atttataagaaatatttgacttttttaattcattgcataaatgatgtat 12450436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 13417425 - 13417505
Alignment:
Q  180 atcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||||| |||| | | |||| |||||||||||||| | ||||||||| |||| || || |||||| || ||||||||    
T  13417425 atcttatttacaagatacagttgattttttaaattcatttaataattgatgcatcaggtttaaaatataaactaaatacat 13417505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 21162473 - 21162413
Alignment:
Q  245 tatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttataaatag 305  Q
    ||||||||| |||||| || ||| |||| |||||||| | |||||| ||||||||||||||    
T  21162473 tatagaccatatacattatttatgcaatgaattaaaaaagttaaatgtttcttataaatag 21162413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 16541 - 16680
Alignment:
Q  182 cttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaa 281  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| ||| || |||||||||||||||||||||| || |||||||| ||| ||||    
T  16541 cttatttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatcaaaa 16640  T
Q  282 catttaaatatttcttataaataggactggagggagtata 321  Q
     | | |||  ||||||||||||| ||| | | ||||||||    
T  16641 aagtcaaacgtttcttataaataagaccgaacggagtata 16680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 16782 - 16708
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacata 261  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16782 tatttataagaaaaatt-gacttt--aaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacata 16708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 167 - 304
Target Start/End: Complemental strand, 28240 - 28101
Alignment:
Q  167 tgtactctctccaatcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatcta 266  Q
    ||||||| ||||  || ||| ||||||||||||||||||||| ||||| ||||| |||||||| |||| |||||| |||||||| ||||||||| || ||    
T  28240 tgtactccctccggtcctatatataagaaaaatttgacttttaaaatttattgaataattgatatatcttgtctaaaatatagatcaaatacatcattta 28141  T
Q  267 tacaataaat--taaaacatttaaatatttcttataaata 304  Q
    | |||| |||   |||| | ||||||||||||||||||||    
T  28140 tgcaatgaatcacaaaaaagttaaatatttcttataaata 28101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 156902 - 156767
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaaca 283  Q
    ||||||||||||||| | || ||||||  |||||||||||||| |||||    || |||||||||||||||||| ||  | ||| |||| |||||||| |    
T  156902 tatttataagaaaaaatagattttttagtttcattgagtaattaatgtacttggtatagaatatagaccaaatatatcgtttatgcaatgaattaaaaaa 156803  T
Q  284 tttaaatatttcttataaataggactggagggagta 319  Q
     |||||| ||||||||||||||||| ||||||||||    
T  156802 gttaaatgtttcttataaataggaccggagggagta 156767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 3734 - 3802
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatag 249  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||||||||||    
T  3734 tcttatatataagaaaaatttgactttttacatttattgagtaattgatgtattttgtctagaatatag 3802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 71973 - 71860
Alignment:
Q  194 aaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatt 293  Q
    ||||| |||| || |||||||||||| |||||| ||||||  ||| || ||||||||| ||||||||||| |||||||| ||| |||| | |||||  ||    
T  71973 aaaaagttgatttattaaattcattgtgtaattaatgtattttgtataaaatatagactaaatacataatttatacaatgaatcaaaaaaattaaaattt 71874  T
Q  294 tcttataaatagga 307  Q
    ||||||||||||||    
T  71873 tcttataaatagga 71860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 308
Target Start/End: Complemental strand, 5388 - 5282
Alignment:
Q  201 tgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaaacatttaaatatttcttata 300  Q
    ||||| |||| ||| ||||||||||| |||||  || | |||||||||||||||||||||||| ||| |||| || ||||| | | |||| |||||||||    
T  5388 tgactatttagatttattgagtaattaatgtactatatatagaatatagaccaaatacataatttatgcaatcaa-taaaaaagtcaaatgtttcttata 5290  T
Q  301 aataggac 308  Q
    ||||||||    
T  5289 aataggac 5282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 1669 - 1532
Alignment:
Q  181 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacataatctatacaataaattaaa 280  Q
    |||||||||||||||||| || | |||||| ||||||||| |||||||||||| | ||||||| |||||| ||||| ||| || ||| |||  ||| |||    
T  1669 tcttatttataagaaaaaattaattttttagattcattgaataattgatgtatta-gtctagagtatagatcaaatgcatcatttatgcaacgaatcaaa 1571  T
Q  281 acatttaaatatttcttataaataggactggagggagta 319  Q
    | | | |||| |||  |||||||||||| ||||| ||||    
T  1570 aaagtcaaatgttttatataaataggaccggaggaagta 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 1487 - 1527
Alignment:
Q  220 agtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||||| |||| ||||||||||||||| |||||||||    
T  1487 agtaattgatatatcttgtctagaatatagatcaaatacat 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 40159 - 40235
Alignment:
Q  184 tatttataagaaaaatttgactttttaaattcattgagtaattgatgtatcatgtctagaatatagaccaaatacat 260  Q
    |||||||||| |||| || ||| |||| |||||||  ||||||||||||||   | || ||||||||||||||||||    
T  40159 tatttataaggaaaaattaactctttagattcattatgtaattgatgtatctgatataaaatatagaccaaatacat 40235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University