View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1718-Insertion-2 (Length: 255)
Name: NF1718-Insertion-2
Description: NF1718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1718-Insertion-2 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 38348804 - 38348924
Alignment:
| Q |
76 |
catgccaacctggttttactgtttcttgttgactcttaatttctatgaatagtatatttttatattgtcctttactttggctttcttgacctagattgtt |
175 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
38348804 |
catgccaacctggttttactgtttcttgttgactcttaatttctatgaatagtatatttttatattgtcctttactttggttttcttgacctagattgtt |
38348903 |
T |
|
| Q |
176 |
attttaggtcttggttcattg |
196 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
38348904 |
attttaggtcttggttcattg |
38348924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University