View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17180_high_1 (Length: 508)

Name: NF17180_high_1
Description: NF17180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17180_high_1
NF17180_high_1
[»] scaffold0347 (2 HSPs)
scaffold0347 (98-348)||(14440-14691)
scaffold0347 (97-227)||(13610-13740)
[»] chr1 (84 HSPs)
chr1 (99-296)||(25065858-25066055)
chr1 (99-238)||(25064936-25065075)
chr1 (97-228)||(13295136-13295267)
chr1 (101-236)||(46282753-46282888)
chr1 (97-196)||(49093042-49093141)
chr1 (101-177)||(32619389-32619465)
chr1 (97-196)||(2828194-2828293)
chr1 (101-176)||(32238704-32238779)
chr1 (110-177)||(32622375-32622442)
chr1 (101-176)||(50062968-50063043)
chr1 (92-177)||(51935218-51935303)
chr1 (182-254)||(34850335-34850407)
chr1 (97-177)||(46282072-46282152)
chr1 (97-168)||(13295608-13295679)
chr1 (101-203)||(6345630-6345732)
chr1 (284-333)||(25065797-25065846)
chr1 (186-254)||(37578462-37578530)
chr1 (187-254)||(24009811-24009878)
chr1 (101-177)||(6344260-6344336)
chr1 (187-254)||(14879062-14879129)
chr1 (97-176)||(24701573-24701652)
chr1 (187-238)||(32917351-32917402)
chr1 (134-177)||(49093832-49093875)
chr1 (97-163)||(29042879-29042945)
chr1 (187-228)||(1841550-1841591)
chr1 (187-252)||(6367653-6367718)
chr1 (187-231)||(1103552-1103596)
chr1 (97-196)||(2829539-2829645)
chr1 (92-196)||(5183790-5183894)
chr1 (187-254)||(4960631-4960698)
chr1 (125-196)||(10019657-10019728)
chr1 (182-233)||(10304009-10304060)
chr1 (182-233)||(10304146-10304197)
chr1 (182-245)||(34849097-34849160)
chr1 (187-238)||(40210656-40210707)
chr1 (187-254)||(46163121-46163188)
chr1 (190-241)||(48691242-48691293)
chr1 (83-165)||(29043070-29043152)
chr1 (186-228)||(31514582-31514624)
chr1 (187-228)||(183487-183528)
chr1 (187-228)||(4716733-4716774)
chr1 (182-254)||(9443658-9443731)
chr1 (182-243)||(13245936-13245997)
chr1 (187-252)||(13914339-13914404)
chr1 (187-228)||(24905432-24905473)
chr1 (187-228)||(25647975-25648016)
chr1 (169-254)||(27999121-27999206)
chr1 (187-228)||(28011454-28011495)
chr1 (187-228)||(33442859-33442900)
chr1 (187-228)||(36694544-36694585)
chr1 (187-228)||(36710645-36710686)
chr1 (187-228)||(42248564-42248605)
chr1 (182-227)||(42267389-42267434)
chr1 (92-164)||(5926837-5926909)
chr1 (181-225)||(16970834-16970878)
chr1 (125-173)||(28534820-28534868)
chr1 (96-196)||(29980922-29981022)
chr1 (139-175)||(50062246-50062282)
chr1 (97-196)||(1040299-1040398)
chr1 (97-196)||(1047205-1047304)
chr1 (97-196)||(2953748-2953847)
chr1 (187-238)||(17662136-17662187)
chr1 (97-196)||(19755689-19755788)
chr1 (187-226)||(40772598-40772637)
chr1 (187-254)||(41098824-41098891)
chr1 (187-254)||(43758913-43758980)
chr1 (187-254)||(44523406-44523473)
chr1 (97-196)||(46849942-46850041)
chr1 (101-176)||(52563656-52563731)
chr1 (110-196)||(5926533-5926619)
chr1 (109-167)||(36381451-36381509)
chr1 (97-163)||(46849852-46849918)
chr1 (187-252)||(19017901-19017966)
chr1 (187-228)||(19515910-19515951)
chr1 (182-243)||(21444680-21444741)
chr1 (182-243)||(22103787-22103848)
chr1 (187-228)||(26024514-26024555)
chr1 (187-228)||(30711418-30711459)
chr1 (187-228)||(34464745-34464786)
chr1 (187-228)||(35152434-35152475)
chr1 (187-228)||(47999388-47999429)
chr1 (187-228)||(52134159-52134200)
chr1 (97-165)||(26953102-26953170)
chr1 (186-254)||(35152613-35152681)
[»] chr7 (56 HSPs)
chr7 (336-506)||(38644382-38644553)
chr7 (97-238)||(38643551-38643692)
chr7 (97-296)||(38644571-38644759)
chr7 (97-254)||(45915750-45915907)
chr7 (97-236)||(4227132-4227271)
chr7 (85-228)||(12644101-12644244)
chr7 (97-228)||(12643101-12643232)
chr7 (97-232)||(47558031-47558166)
chr7 (97-228)||(4226126-4226257)
chr7 (97-196)||(7158232-7158331)
chr7 (97-196)||(12929288-12929387)
chr7 (97-196)||(12930773-12930872)
chr7 (97-228)||(45914527-45914656)
chr7 (97-177)||(37284110-37284190)
chr7 (97-177)||(37289329-37289409)
chr7 (97-228)||(27479988-27480119)
chr7 (101-177)||(22661362-22661438)
chr7 (280-333)||(43123398-43123451)
chr7 (97-177)||(27480766-27480846)
chr7 (101-173)||(31695637-31695709)
chr7 (187-254)||(2640448-2640515)
chr7 (187-254)||(5457177-5457244)
chr7 (187-238)||(32053429-32053480)
chr7 (101-171)||(31694476-31694546)
chr7 (187-254)||(23181264-23181331)
chr7 (187-254)||(24388910-24388977)
chr7 (187-254)||(28469278-28469345)
chr7 (187-254)||(40379860-40379927)
chr7 (97-196)||(43937895-43937994)
chr7 (97-196)||(43938178-43938277)
chr7 (187-252)||(3914229-3914294)
chr7 (187-232)||(6571104-6571149)
chr7 (187-228)||(17102111-17102152)
chr7 (187-228)||(27396891-27396932)
chr7 (187-228)||(27991830-27991871)
chr7 (187-228)||(30948425-30948466)
chr7 (187-228)||(32680860-32680901)
chr7 (187-228)||(42731510-42731551)
chr7 (187-228)||(45010900-45010941)
chr7 (209-265)||(22539252-22539308)
chr7 (125-177)||(37563657-37563709)
chr7 (187-254)||(10935885-10935952)
chr7 (182-249)||(11397464-11397531)
chr7 (115-165)||(5280586-5280636)
chr7 (111-173)||(7159235-7159297)
chr7 (110-196)||(12931022-12931108)
chr7 (97-163)||(15827915-15827981)
chr7 (119-165)||(37563377-37563423)
chr7 (187-228)||(22871573-22871614)
chr7 (187-228)||(32299001-32299042)
chr7 (187-228)||(34928915-34928956)
chr7 (193-254)||(37656949-37657010)
chr7 (187-228)||(39686799-39686840)
chr7 (109-174)||(40022551-40022615)
chr7 (187-228)||(45010689-45010730)
chr7 (182-234)||(13311323-13311375)
[»] chr2 (57 HSPs)
chr2 (88-236)||(25624393-25624541)
chr2 (97-228)||(25623289-25623420)
chr2 (97-196)||(24387352-24387451)
chr2 (97-197)||(24388255-24388355)
chr2 (85-177)||(20101758-20101851)
chr2 (97-177)||(20982525-20982605)
chr2 (97-177)||(29957818-29957898)
chr2 (86-177)||(20983280-20983371)
chr2 (97-228)||(29958515-29958646)
chr2 (97-179)||(20103161-20103243)
chr2 (101-169)||(43236509-43236577)
chr2 (107-196)||(19620793-19620882)
chr2 (187-252)||(36755184-36755249)
chr2 (182-243)||(11721371-11721432)
chr2 (187-252)||(37895619-37895684)
chr2 (108-176)||(23206428-23206496)
chr2 (108-176)||(23678032-23678100)
chr2 (101-169)||(43237747-43237815)
chr2 (97-196)||(10446833-10446932)
chr2 (187-238)||(15848179-15848230)
chr2 (182-233)||(17266484-17266535)
chr2 (187-274)||(25893468-25893555)
chr2 (187-254)||(36382252-36382319)
chr2 (187-254)||(39423606-39423673)
chr2 (182-244)||(10840562-10840624)
chr2 (110-196)||(16367247-16367333)
chr2 (123-165)||(21103108-21103150)
chr2 (187-232)||(1696001-1696046)
chr2 (187-228)||(6657969-6658010)
chr2 (97-174)||(9694048-9694125)
chr2 (187-228)||(11163319-11163360)
chr2 (187-228)||(14900748-14900789)
chr2 (187-228)||(16099146-16099187)
chr2 (187-228)||(33739794-33739835)
chr2 (187-252)||(34447904-34447968)
chr2 (187-228)||(39498401-39498442)
chr2 (187-228)||(44714057-44714098)
chr2 (97-165)||(1149938-1150006)
chr2 (182-230)||(17266624-17266672)
chr2 (211-274)||(6573656-6573719)
chr2 (187-254)||(10712814-10712881)
chr2 (97-196)||(20911131-20911230)
chr2 (119-169)||(7981070-7981120)
chr2 (110-196)||(28599441-28599527)
chr2 (187-252)||(2318249-2318314)
chr2 (187-232)||(6573137-6573182)
chr2 (179-252)||(11349477-11349550)
chr2 (182-243)||(11689627-11689688)
chr2 (187-228)||(13995938-13995979)
chr2 (110-163)||(17580452-17580505)
chr2 (187-228)||(33062315-33062356)
chr2 (88-176)||(33882892-33882981)
chr2 (187-228)||(36479809-36479850)
chr2 (187-228)||(41248824-41248865)
chr2 (101-169)||(7983837-7983905)
chr2 (97-165)||(32519156-32519224)
chr2 (186-254)||(44044204-44044272)
[»] chr5 (65 HSPs)
chr5 (97-228)||(22870430-22870561)
chr5 (107-228)||(22869616-22869737)
chr5 (97-228)||(20856933-20857064)
chr5 (97-173)||(31107932-31108008)
chr5 (97-196)||(14744730-14744829)
chr5 (97-228)||(20857515-20857646)
chr5 (101-236)||(36476770-36476905)
chr5 (97-196)||(21978971-21979070)
chr5 (101-216)||(36477356-36477471)
chr5 (97-177)||(20072888-20072968)
chr5 (97-177)||(39181058-39181138)
chr5 (97-228)||(20072122-20072253)
chr5 (101-177)||(16532898-16532974)
chr5 (101-177)||(21978036-21978112)
chr5 (97-174)||(8654108-8654185)
chr5 (92-177)||(39181815-39181900)
chr5 (101-177)||(8673777-8673853)
chr5 (97-177)||(16533644-16533724)
chr5 (134-196)||(39402148-39402210)
chr5 (182-254)||(14848976-14849049)
chr5 (187-254)||(13962955-13963022)
chr5 (187-254)||(19892578-19892645)
chr5 (187-238)||(35512239-35512290)
chr5 (187-254)||(38442159-38442226)
chr5 (110-175)||(21972104-21972168)
chr5 (187-252)||(29646634-29646699)
chr5 (99-196)||(31108338-31108434)
chr5 (187-252)||(32242333-32242398)
chr5 (187-231)||(8322495-8322539)
chr5 (96-196)||(25253086-25253186)
chr5 (96-196)||(25316876-25316976)
chr5 (187-231)||(35920477-35920521)
chr5 (187-238)||(5024304-5024355)
chr5 (187-254)||(11047528-11047595)
chr5 (187-254)||(13362498-13362565)
chr5 (97-196)||(14745449-14745548)
chr5 (97-196)||(37944995-37945094)
chr5 (187-254)||(39453391-39453458)
chr5 (110-196)||(21260879-21260965)
chr5 (187-233)||(38475290-38475336)
chr5 (187-228)||(297279-297320)
chr5 (187-228)||(3529138-3529179)
chr5 (187-228)||(5993980-5994021)
chr5 (187-228)||(6758130-6758171)
chr5 (187-228)||(14194719-14194760)
chr5 (187-228)||(28269684-28269725)
chr5 (187-228)||(28771134-28771175)
chr5 (187-228)||(31482667-31482708)
chr5 (187-228)||(41930607-41930648)
chr5 (182-238)||(12904840-12904896)
chr5 (125-165)||(33735342-33735382)
chr5 (187-254)||(10684030-10684097)
chr5 (97-196)||(32052508-32052607)
chr5 (97-196)||(33735597-33735696)
chr5 (187-225)||(6150545-6150583)
chr5 (97-163)||(7015509-7015575)
chr5 (187-237)||(24547412-24547462)
chr5 (110-160)||(31118969-31119019)
chr5 (187-228)||(1506058-1506099)
chr5 (187-228)||(27587239-27587280)
chr5 (187-227)||(186510-186550)
chr5 (96-176)||(18934713-18934793)
chr5 (83-126)||(19892294-19892338)
chr5 (97-165)||(25253401-25253469)
chr5 (97-165)||(25317192-25317260)
[»] chr3 (57 HSPs)
chr3 (97-232)||(29192957-29193092)
chr3 (97-228)||(32717073-32717204)
chr3 (101-228)||(29192040-29192167)
chr3 (92-177)||(45279303-45279388)
chr3 (97-177)||(48189118-48189198)
chr3 (101-216)||(37249204-37249319)
chr3 (110-177)||(44476063-44476130)
chr3 (92-177)||(11026651-11026736)
chr3 (97-228)||(2943914-2944045)
chr3 (97-177)||(2944685-2944765)
chr3 (97-177)||(22736709-22736789)
chr3 (110-177)||(1756564-1756631)
chr3 (110-177)||(48188392-48188459)
chr3 (97-177)||(1757323-1757403)
chr3 (101-177)||(37249817-37249892)
chr3 (113-177)||(43105250-43105314)
chr3 (101-177)||(43105853-43105929)
chr3 (101-177)||(44481972-44482048)
chr3 (101-177)||(45278549-45278625)
chr3 (122-228)||(11025963-11026069)
chr3 (187-254)||(33156264-33156331)
chr3 (187-252)||(23458251-23458316)
chr3 (187-254)||(9294228-9294295)
chr3 (187-238)||(26463884-26463935)
chr3 (187-254)||(33689649-33689716)
chr3 (187-254)||(43384374-43384441)
chr3 (187-228)||(19741188-19741229)
chr3 (131-212)||(32716284-32716365)
chr3 (182-238)||(41988048-41988104)
chr3 (187-254)||(40758235-40758302)
chr3 (97-163)||(11312929-11312995)
chr3 (97-163)||(21300327-21300393)
chr3 (187-233)||(40033747-40033793)
chr3 (187-237)||(51994173-51994223)
chr3 (97-163)||(53037151-53037217)
chr3 (187-228)||(2796270-2796311)
chr3 (187-228)||(8041707-8041748)
chr3 (187-228)||(10770756-10770797)
chr3 (280-325)||(21783621-21783666)
chr3 (187-228)||(36314563-36314604)
chr3 (187-228)||(48322642-48322683)
chr3 (187-228)||(54466514-54466555)
chr3 (187-231)||(40506080-40506124)
chr3 (110-198)||(55036683-55036771)
chr3 (97-196)||(1741388-1741487)
chr3 (187-254)||(25108365-25108432)
chr3 (182-237)||(44654790-44654845)
chr3 (187-253)||(25107304-25107370)
chr3 (119-196)||(10998157-10998234)
chr3 (182-243)||(20704608-20704669)
chr3 (140-177)||(22735403-22735440)
chr3 (187-228)||(46474906-46474947)
chr3 (125-174)||(46670561-46670610)
chr3 (182-238)||(39399378-39399434)
chr3 (97-165)||(53037028-53037096)
chr3 (182-238)||(54317917-54317973)
chr3 (187-227)||(55052545-55052585)
[»] chr8 (70 HSPs)
chr8 (14-95)||(39030404-39030485)
chr8 (97-196)||(38598965-38599064)
chr8 (86-196)||(25288076-25288187)
chr8 (97-228)||(34213765-34213896)
chr8 (96-196)||(1231526-1231626)
chr8 (97-173)||(7393168-7393244)
chr8 (97-196)||(1232799-1232896)
chr8 (97-177)||(34665771-34665851)
chr8 (97-177)||(33497635-33497715)
chr8 (97-236)||(34214488-34214628)
chr8 (97-167)||(4463455-4463525)
chr8 (122-177)||(34666559-34666614)
chr8 (101-177)||(4970130-4970206)
chr8 (101-173)||(24377186-24377258)
chr8 (107-177)||(24379015-24379085)
chr8 (101-173)||(29574747-29574819)
chr8 (187-254)||(16388796-16388863)
chr8 (97-176)||(27437539-27437618)
chr8 (122-177)||(33497042-33497097)
chr8 (101-171)||(29575910-29575980)
chr8 (187-232)||(23698536-23698581)
chr8 (187-252)||(36928567-36928632)
chr8 (182-253)||(2693787-2693859)
chr8 (186-254)||(30711987-30712055)
chr8 (186-254)||(30719764-30719832)
chr8 (101-169)||(36574822-36574890)
chr8 (187-238)||(4405946-4405997)
chr8 (138-173)||(7392250-7392285)
chr8 (115-174)||(9632347-9632406)
chr8 (186-233)||(12199210-12199257)
chr8 (186-233)||(12443638-12443685)
chr8 (187-238)||(13186151-13186202)
chr8 (97-176)||(27436564-27436643)
chr8 (187-254)||(35756673-35756740)
chr8 (188-238)||(31608799-31608849)
chr8 (97-163)||(37342976-37343042)
chr8 (187-233)||(38862709-38862755)
chr8 (97-163)||(43866835-43866901)
chr8 (187-228)||(1425318-1425359)
chr8 (187-228)||(3041721-3041762)
chr8 (110-179)||(20096325-20096394)
chr8 (187-228)||(23663810-23663851)
chr8 (187-252)||(36186339-36186404)
chr8 (187-228)||(36325325-36325366)
chr8 (110-163)||(36623560-36623613)
chr8 (187-228)||(38845564-38845605)
chr8 (187-228)||(39071767-39071808)
chr8 (187-228)||(40775915-40775956)
chr8 (187-228)||(44407122-44407163)
chr8 (186-254)||(20385658-20385726)
chr8 (186-254)||(20386700-20386768)
chr8 (186-254)||(30710945-30711013)
chr8 (97-165)||(36623353-36623421)
chr8 (97-165)||(38600265-38600333)
chr8 (97-165)||(40422475-40422543)
chr8 (97-196)||(7677-7776)
chr8 (188-243)||(22890275-22890330)
chr8 (109-168)||(36576029-36576088)
chr8 (97-196)||(36623637-36623736)
chr8 (97-196)||(43866712-43866811)
chr8 (97-163)||(547629-547695)
chr8 (110-196)||(27857026-27857112)
chr8 (187-228)||(2266583-2266624)
chr8 (187-228)||(8316884-8316925)
chr8 (187-228)||(12273149-12273190)
chr8 (187-228)||(22915654-22915695)
chr8 (119-196)||(23424796-23424873)
chr8 (182-243)||(24085860-24085921)
chr8 (187-228)||(35449874-35449915)
chr8 (182-254)||(31873169-31873241)
[»] chr6 (39 HSPs)
chr6 (97-196)||(33401126-33401225)
chr6 (97-236)||(4117507-4117646)
chr6 (97-228)||(14656481-14656612)
chr6 (97-196)||(17784385-17784484)
chr6 (97-234)||(4116800-4116937)
chr6 (102-177)||(8427384-8427459)
chr6 (92-177)||(33399962-33400047)
chr6 (110-173)||(1661453-1661516)
chr6 (97-177)||(14657228-14657308)
chr6 (97-177)||(8427201-8427281)
chr6 (96-196)||(23291744-23291844)
chr6 (97-196)||(13480209-13480308)
chr6 (97-196)||(13480492-13480591)
chr6 (187-254)||(21627983-21628050)
chr6 (187-254)||(30803952-30804019)
chr6 (187-254)||(33517625-33517692)
chr6 (187-254)||(33647054-33647121)
chr6 (187-228)||(12080727-12080768)
chr6 (187-228)||(28000650-28000691)
chr6 (187-228)||(30337540-30337581)
chr6 (186-254)||(679956-680024)
chr6 (132-196)||(5064371-5064435)
chr6 (187-254)||(30725850-30725917)
chr6 (110-196)||(32337578-32337664)
chr6 (187-228)||(363095-363136)
chr6 (182-243)||(1215147-1215208)
chr6 (187-228)||(3059348-3059389)
chr6 (96-165)||(3299874-3299943)
chr6 (119-196)||(5064619-5064696)
chr6 (187-228)||(14196880-14196921)
chr6 (187-228)||(17734459-17734500)
chr6 (92-165)||(23292059-23292132)
chr6 (186-254)||(680998-681066)
chr6 (97-165)||(15819805-15819873)
chr6 (97-165)||(16704624-16704692)
chr6 (132-196)||(20994975-20995039)
chr6 (187-243)||(26463270-26463326)
chr6 (187-251)||(28498298-28498362)
chr6 (187-251)||(29810709-29810773)
[»] chr4 (73 HSPs)
chr4 (97-228)||(23455657-23455788)
chr4 (97-212)||(23454955-23455070)
chr4 (97-196)||(53477080-53477179)
chr4 (92-177)||(54591597-54591682)
chr4 (101-216)||(38982576-38982691)
chr4 (97-177)||(38813555-38813635)
chr4 (97-177)||(38814346-38814426)
chr4 (99-196)||(54590146-54590243)
chr4 (97-177)||(56556583-56556663)
chr4 (85-177)||(56557344-56557436)
chr4 (97-171)||(13336863-13336937)
chr4 (182-252)||(48528558-48528628)
chr4 (97-177)||(52815664-52815744)
chr4 (97-177)||(52816442-52816522)
chr4 (186-254)||(16605692-16605760)
chr4 (97-177)||(55013108-55013187)
chr4 (187-254)||(35028268-35028335)
chr4 (101-171)||(22882352-22882422)
chr4 (101-171)||(22934016-22934086)
chr4 (101-166)||(9254411-9254476)
chr4 (187-254)||(14801827-14801894)
chr4 (86-196)||(12691396-12691506)
chr4 (188-274)||(54435347-54435433)
chr4 (187-228)||(37976449-37976490)
chr4 (187-232)||(50418929-50418974)
chr4 (190-238)||(17356208-17356256)
chr4 (182-238)||(52298112-52298168)
chr4 (187-254)||(15507943-15508010)
chr4 (187-238)||(34765666-34765717)
chr4 (182-245)||(48529855-48529918)
chr4 (186-228)||(4982991-4983033)
chr4 (187-233)||(16005929-16005975)
chr4 (97-163)||(22249927-22249993)
chr4 (101-171)||(22881172-22881242)
chr4 (101-171)||(22932836-22932906)
chr4 (187-233)||(44967329-44967375)
chr4 (194-252)||(53129778-53129836)
chr4 (187-253)||(53701903-53701969)
chr4 (187-228)||(9145031-9145072)
chr4 (187-228)||(13058128-13058169)
chr4 (187-228)||(18831440-18831481)
chr4 (187-228)||(23613400-23613441)
chr4 (187-228)||(27934623-27934664)
chr4 (187-228)||(32950233-32950274)
chr4 (187-228)||(36009109-36009150)
chr4 (187-228)||(37248327-37248368)
chr4 (187-228)||(42738296-42738337)
chr4 (187-228)||(43155792-43155833)
chr4 (187-228)||(49879472-49879513)
chr4 (97-165)||(8287248-8287316)
chr4 (186-238)||(10781770-10781822)
chr4 (186-238)||(24349764-24349816)
chr4 (187-227)||(24711202-24711242)
chr4 (96-196)||(32846362-32846462)
chr4 (97-165)||(53475832-53475900)
chr4 (187-227)||(54086992-54087032)
chr4 (97-196)||(22250017-22250116)
chr4 (97-196)||(53559671-53559770)
chr4 (97-196)||(54961432-54961531)
chr4 (187-228)||(5369038-5369079)
chr4 (187-228)||(9400784-9400825)
chr4 (187-228)||(22566890-22566931)
chr4 (187-228)||(33247538-33247579)
chr4 (187-228)||(34837339-34837380)
chr4 (187-228)||(35508536-35508577)
chr4 (110-171)||(35730970-35731031)
chr4 (187-228)||(38012261-38012302)
chr4 (187-228)||(52909344-52909385)
chr4 (281-333)||(55866333-55866386)
chr4 (97-165)||(19740861-19740929)
chr4 (97-165)||(33294458-33294526)
chr4 (97-165)||(37677849-37677917)
chr4 (187-231)||(51692644-51692688)
[»] scaffold1493 (1 HSPs)
scaffold1493 (86-196)||(582-693)
[»] scaffold0009 (2 HSPs)
scaffold0009 (85-196)||(260990-261101)
scaffold0009 (97-198)||(262439-262540)
[»] scaffold0182 (2 HSPs)
scaffold0182 (97-173)||(14400-14476)
scaffold0182 (97-177)||(13135-13215)
[»] scaffold0018 (1 HSPs)
scaffold0018 (97-177)||(73110-73190)
[»] scaffold0008 (1 HSPs)
scaffold0008 (187-254)||(239821-239888)
[»] scaffold0005 (1 HSPs)
scaffold0005 (187-254)||(37833-37900)
[»] scaffold0031 (1 HSPs)
scaffold0031 (187-251)||(69056-69120)
[»] scaffold0220 (1 HSPs)
scaffold0220 (187-266)||(23322-23401)
[»] scaffold0020 (1 HSPs)
scaffold0020 (186-228)||(139762-139804)
[»] scaffold0559 (1 HSPs)
scaffold0559 (187-228)||(1324-1365)
[»] scaffold0027 (1 HSPs)
scaffold0027 (182-254)||(14060-14132)
[»] scaffold0024 (1 HSPs)
scaffold0024 (187-228)||(141859-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (187-228)||(1860-1901)
[»] scaffold0206 (1 HSPs)
scaffold0206 (97-196)||(10326-10425)
[»] scaffold0295 (1 HSPs)
scaffold0295 (187-228)||(2234-2275)
[»] scaffold0205 (1 HSPs)
scaffold0205 (187-228)||(21234-21275)
[»] scaffold0201 (1 HSPs)
scaffold0201 (132-196)||(14177-14241)


Alignment Details
Target: scaffold0347 (Bit Score: 196; Significance: 1e-106; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 98 - 348
Target Start/End: Complemental strand, 14691 - 14440
Alignment:
Q  98 cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattta 197  Q
    |||||||| ||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14691 cttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattta 14592  T
Q  198 agatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaaagaccattatacct 297  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14591 agatttcgtccctctccccacttaatcactgccacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaaagaccattataccc 14492  T
Q  298 ctgtgttcatcttctcaaaatcttccctccttcact-acttcacttctctgg 348  Q
    |||||| ||||||||||||||||||||||||||  | |||||||||||||||    
T  14491 ctgtgtccatcttctcaaaatcttccctccttccttcacttcacttctctgg 14440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 13610 - 13740
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  13610 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcattt 13709  T
Q  197 aagatttcgtcactctccccacttaatcact 227  Q
    ||||||||||| |||||||||||||||||||    
T  13710 aagatttcgtccctctccccacttaatcact 13740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 4e-67; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 99 - 296
Target Start/End: Complemental strand, 25066055 - 25065858
Alignment:
Q  99 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaa 198  Q
    ||||||| ||||||||||| |  ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||| | ||||||||||||||||||    
T  25066055 ttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcatttaa 25065956  T
Q  199 gatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaaagaccattatacc 296  Q
    ||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  25065955 gatttcgtccctctctccacttaatcactgccacctcactgattagctgacgtggctctatttatttgttaaatgagttgcgaaaaaaccattatacc 25065858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 25064936 - 25065075
Alignment:
Q  99 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaa 198  Q
    ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||| || || ||||||||||||||||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcatttaa 25065035  T
Q  199 gatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    ||||||||| |||||| ||||| ||||||| ||| |||||    
T  25065036 gatttcgtccctctcctcacttgatcactgccacgtcact 25065075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 13295136 - 13295267
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |||||||| || || ||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||| | ||||||||||||||||    
T  13295136 gcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcattt 13295235  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
    || || ||||| |||| |||  ||||||||||    
T  13295236 aaaatgtcgtccctcttcccggttaatcactg 13295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 46282888 - 46282753
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 200  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||  | ||||||||| | |    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  201 tttcgtcactctccccacttaatcactgtcacatca 236  Q
     |||||| |||| |||   ||||||||| |||||||    
T  46282788 gttcgtccctcttcccggataatcactgccacatca 46282753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 49093042 - 49093141
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||| | || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||  | |||||||||    
T  49093042 gcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcattt 49093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 32619389 - 32619465
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| || |||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgccc 32619465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 2828194 - 2828293
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||||||| | |||||||||||||| | ||||||||  |  ||| |||||||||||    
T  2828194 gcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcattt 2828293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 32238704 - 32238779
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||| ||||||||||| ||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  32238704 aaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcc 32238779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 32622442 - 32622375
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32622442 tttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgccc 32622375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 50063043 - 50062968
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcc 50062968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 51935303 - 51935218
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||| ||||||||| || |||||||| || ||||||| | ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  51935303 ttttggcttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgccc 51935218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 34850407 - 34850335
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||| |||||||||||| ||||| || |||||||||||||||||||| ||| |||||||||||||||||||||    
T  34850407 aaaatttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactgattagctgacgtggc 34850335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 46282072 - 46282152
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| |  |||||||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  46282072 gcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgccc 46282152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 13295679 - 13295608
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccc 168  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||| |||| |||||||| ||||||    
T  13295679 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 6345732 - 6345630
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 200  Q
    ||||| ||||||||||| ||||||||  || |||||||  ||||||||||||||||||||||||| ||||||||||| |  ||| ||||| ||||||| |    
T  6345732 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaa 6345633  T
Q  201 ttt 203  Q
    |||    
T  6345632 ttt 6345630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 25065846 - 25065797
Alignment:
Q  284 agaccattatacctctgtgttcatcttctcaaaatcttccctccttcact 333  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25065846 agaccattatacccctgtgttcatcttctcaaaatcttccctccttcact 25065797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 37578530 - 37578462
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  37578530 attaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggc 37578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 24009878 - 24009811
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||||    
T  24009878 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtggc 24009811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 6344260 - 6344336
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| ||||||||||| || |||||  || |||||||  |||||||| ||||||||||||||||||||||||||||    
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgccc 6344336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 14879062 - 14879129
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  14879062 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 14879129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 24701652 - 24701573
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||| ||||| |||||||| ||||||||||| ||||||||||    
T  24701652 gcttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgcc 24701573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 32917351 - 32917402
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  32917351 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcact 32917402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 49093875 - 49093832
Alignment:
Q  134 tttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgccc 49093832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 29042945 - 29042879
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||    
T  29042945 gcttaaataggtctttcatccttgcaaatataggtcatttgaattttcatccctgaagttactaatc 29042879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 1841550 - 1841591
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  1841550 ttaatcatttaaaatttcgtcactctccccacttaatcactg 1841591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 6367653 - 6367718
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  6367653 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 6367718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 1103552 - 1103596
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 231  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  1103552 ttaatcatttaaaatttcgtccctctccccacttaatcactgtca 1103596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 2829645 - 2829539
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgat-------ttttcatccctgaacttactaatcctcccattttgcccatataaaaatta 189  Q
    ||||||||| ||||||||||| | |||||||||| ||||||||       ||||||||| ||| |||||||||||||||||||| ||| |  ||| ||||    
T  2829645 gcttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatatta 2829546  T
Q  190 atcattt 196  Q
    |||||||    
T  2829545 atcattt 2829539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 5183894 - 5183790
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaat 191  Q
    |||| |||||||||||  |||  ||| ||||| |||||||||||||| ||||| |||||||| |||| |||||| ||| ||||||| |  ||| ||||||    
T  5183894 ttttggcttaaatacgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaat 5183795  T
Q  192 cattt 196  Q
    |||||    
T  5183794 cattt 5183790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 4960631 - 4960698
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||| ||||||||||||||| ||| ||||| ||| | |||||||||    
T  4960631 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatgacgtggc 4960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 10019728 - 10019657
Alignment:
Q  125 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||  |  ||| |||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcattt 10019657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 10304009 - 10304060
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  10304009 aaaatttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 10304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 10304197 - 10304146
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  10304197 aaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccaca 10304146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 34849097 - 34849160
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagc 245  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||| ||| |||| |||||||    
T  34849097 aaaatttaatcatttaaaatttcgtccctctcccctcttaatcactgccacgtcaccgattagc 34849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 40210707 - 40210656
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  40210707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 40210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 46163121 - 46163188
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||  ||||| ||| | |||||||||    
T  46163121 ttaatcatttaaaatttcgtctctctccccacttaattactgtcatgtcactaatttgatgacgtggc 46163188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 48691242 - 48691293
Alignment:
Q  190 atcatttaagatttcgtcactctccccacttaatcactgtcacatcactgat 241  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||||    
T  48691242 atcatttaaaattttgtcactctccccacttaatcactgccacgtcactgat 48691293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 29043152 - 29043070
Alignment:
Q  83 tttattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    |||||||||| || ||||||||| |  |||| ||  ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  29043152 tttattttatcttggcttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcct 29043070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 31514624 - 31514582
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  31514624 attaatcatttaaaatttcgtccctctccccacttaatcactg 31514582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 183528 - 183487
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  183528 ttaatcatttaaaatttcgtccctctccccacttaatcactg 183487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 4716774 - 4716733
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  4716774 ttaatcatttaaaatttcgtctctctccccacttaatcactg 4716733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 9443658 - 9443731
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtggc 254  Q
    |||| |||||||||||| |||| ||| ||| ||||||||||||| |||||  ||||| ||||||||||||||||    
T  9443658 aaaatttaatcatttaaaatttggtccctccccccacttaatcattgtcaagtcactagattagctgacgtggc 9443731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 13245936 - 13245997
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||| |||| |||| ||| |||||||||||||||||||||||| ||||| ||||    
T  13245936 aaaatttaatcacttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 13245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 13914404 - 13914339
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| ||||||||||| |||||||| ||| ||||| ||| | |||||||    
T  13914404 ttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcactaatttgatgacgtg 13914339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 24905473 - 24905432
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatcactg 24905432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 25647975 - 25648016
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  25647975 ttaatcatttaaaatttcgtccctctccccacttaatcactg 25648016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 27999206 - 27999121
Alignment:
Q  169 attttgcccatataaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||  || |||| |||||||||| | |||||||| |||| ||||||||||||||| ||| ||||| ||| ||||| |||||    
T  27999206 attttgccactacaaaatttaatcattttaaatttcgtctctcttcccacttaatcactgccacctcactaatttgctgatgtggc 27999121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 28011454 - 28011495
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28011495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 33442900 - 33442859
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactg 33442859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 36694585 - 36694544
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36694585 ttaatcatttaaaatttcgtctctctccccacttaatcactg 36694544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 36710686 - 36710645
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36710686 ttaatcatttaaaatttcgtctctctccccacttaatcactg 36710645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 42248564 - 42248605
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  42248564 ttaatcatttaaaatttcgtccctctccccacttaatcactg 42248605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 42267389 - 42267434
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcact 227  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||    
T  42267389 aaaatttaatcatttaatatttcgtctctctccccacttaatcact 42267434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 5926909 - 5926837
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcc 164  Q
    |||| ||||||||| |  |||| ||| ||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  5926909 ttttggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcatccctgaagttactaatcc 5926837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 16970878 - 16970834
Alignment:
Q  181 taaaaattaatcatttaagatttcgtcactctccccacttaatca 225  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||    
T  16970878 taaaatttaatcatttaaaatttcgtccctctccccacttaatca 16970834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 28534868 - 28534820
Alignment:
Q  125 tataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    |||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  28534868 tatagggcatttgaaatttcatccctgaacttactaatccttccatttt 28534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 29981022 - 29980922
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    |||||||||| |  |||| || |||||| |||||| ||||||| ||||| |||| ||| ||||||||||| ||| ||||||| |  ||| ||||||||||    
T  29981022 agcttaaataggtctttcgtctttgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatt 29980923  T
Q  196 t 196  Q
    |    
T  29980922 t 29980922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 50062246 - 50062282
Alignment:
Q  139 tttttcatccctgaacttactaatcctcccattttgc 175  Q
    ||||||||||||||||||||||||||| |||||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgc 50062282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 1040299 - 1040398
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||||||||| |||| ||||||||| ||||  |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  1040299 gcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 1040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 1047205 - 1047304
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||||||||| |||| ||||||||| ||||  |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  1047205 gcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 1047304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 2953847 - 2953748
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  2953847 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 2953748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 17662187 - 17662136
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||| ||||||||||||||| ||| |||||    
T  17662187 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcact 17662136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 19755788 - 19755689
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| |||| ||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  19755788 gcttaaataggtctttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 19755689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 40772598 - 40772637
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcac 226  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  40772598 ttaatcatttaaaatttcgtccctctccccacttaatcac 40772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 41098824 - 41098891
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||| ||| | |||||||||||||||||  ||||||||| ||| | |||||||||    
T  41098824 ttaatcatttaaaattttgtccccctccccacttaatcactaccacatcactaatttgatgacgtggc 41098891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 43758913 - 43758980
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||| |||||||||||||| ||  ||||| ||| | |||||||||    
T  43758913 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtggc 43758980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 44523473 - 44523406
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| ||||| || ||| |  ||||||||||||| ||| ||||| |||||||||||||||    
T  44523473 ttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaattagctgacgtggc 44523406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 46850041 - 46849942
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||| ||||| ||| ||||||| |  ||| |||||||||||    
T  46850041 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcattt 46849942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 52563656 - 52563731
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||| ||||||||||| ||||| ||||||  |||||   |||||||| |||  ||||||||||||||||||||||    
T  52563656 aaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgcc 52563731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 5926533 - 5926619
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  5926533 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcattt 5926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 36381509 - 36381451
Alignment:
Q  109 atttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcc 167  Q
    ||||||||| ||||| ||||||| ||||||  ||| |||| ||||||||||||||||||    
T  36381509 atttcatccctgcaaatataggctatttgaaattttatccttgaacttactaatcctcc 36381451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 46849852 - 46849918
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||||||||| |||| | ||||||| ||||| |||||||| |||||||||    
T  46849852 gcttaaataggtctttcatccttgcaaatatatgtcatttgaattttcgtccctgaagttactaatc 46849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 19017966 - 19017901
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||| ||| |||| ||||||||||||||| | ||||||| ||| | |||||||    
T  19017966 ttaatcatttaaaattttgtccctcttcccacttaatcactgccgcatcactaatttgatgacgtg 19017901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 19515910 - 19515951
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    ||||| |||||| |||||||| ||||||||||||||||||||    
T  19515910 ttaattatttaaaatttcgtccctctccccacttaatcactg 19515951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 21444680 - 21444741
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||| |||| ||||||||  ||||||||||||||||||| ||| ||||| ||||    
T  21444680 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 21444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 22103848 - 22103787
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||| |||| |||||||| ||||| |||||||||||||| ||| ||||| ||||    
T  22103848 aaaatttaatcacttaaaatttcgtccctctctccacttaatcactgccacgtcactaatta 22103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 26024514 - 26024555
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| | |||||| ||||||||||||||||||||    
T  26024514 ttaatcatttaaaagttcgtccctctccccacttaatcactg 26024555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 30711418 - 30711459
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||| ||||||||||||||||    
T  30711418 ttaatcatttaaaatttcgtccctcgccccacttaatcactg 30711459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 34464786 - 34464745
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  34464786 ttaatcatttaaaattttgtccctctccccacttaatcactg 34464745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 35152434 - 35152475
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  35152434 ttaatcatttaaaattttgtccctctccccacttaatcactg 35152475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 47999429 - 47999388
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| || ||||| ||||||||||||||||||||    
T  47999429 ttaatcatttaaaatatcgtccctctccccacttaatcactg 47999388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 52134159 - 52134200
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  52134159 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 52134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 26953102 - 26953170
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||||||||| ||||| | |||||| ||||| |||||||| |||||||||||    
T  26953102 gcttaaatatgtctttcgtccttgcaaatatagactatttgaattttcgtccctgaagttactaatcct 26953170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 35152681 - 35152613
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| ||||||||  |   || |||||||||||||||||||||| ||| | |||||||||    
T  35152681 attaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacatcactaattcgatgacgtggc 35152613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 8e-56; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 336 - 506
Target Start/End: Complemental strand, 38644553 - 38644382
Alignment:
Q  336 ttcacttctctggaacaccatttcctcccaaaagaacttnnnnnnnnc-ccttgtggttgtggatagaaccatacctacnnnnnnncacatggttttttc 434  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||       ||||||||||||||    
T  38644553 ttcacttctctggaacaccatttcctcccaaaagaacttaaaaaaaaaaccttgtggttgtggatagaaccatacctacaaaaaaacacatggttttttc 38644454  T
Q  435 gctgccattacccaaccctttttcaactacttctccttcaattgatttcctcatcaatatgcagtgcttcat 506  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38644453 gctgccactacccaaccctttttcaactacttctccttcaattgatttcctcatcaatatgcagtgcttcat 38644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 38643551 - 38643692
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| | | ||||||||||||||||    
T  38643551 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcattt 38643650  T
Q  197 aagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    ||||||||||| ||||||||||||||| |||||||| |||||    
T  38643651 aagatttcgtccctctccccacttaattactgtcacgtcact 38643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 97 - 296
Target Start/End: Complemental strand, 38644759 - 38644571
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||| |||||| | |||| ||||||| |||||||| || | ||||||||||||||||    
T  38644759 gcttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatcattt 38644660  T
Q  197 aagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaaagaccattatacc 296  Q
    |||||||| || ||||||||||||||||           ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  38644659 aagatttcatccctctccccacttaatc-----------actgattagctgacgtgactctgtttaatggttaaatgagttgcaaaaagaccattatacc 38644571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 45915907 - 45915750
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| | ||||||||||||||||    
T  45915907 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcattt 45915808  T
Q  197 aagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    || ||| |||| ||||  ||  |||||||||| ||| |||||||||||||||||||||    
T  45915807 aaaattccgtccctctttccgattaatcactgccacgtcactgattagctgacgtggc 45915750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 4227271 - 4227132
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||| |||||    
T  4227271 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccattt 4227172  T
Q  197 aagatttcgtcactctccccacttaatcactgtcacatca 236  Q
    || |||||||| ||||  ||  |||||||||| |||||||    
T  4227171 aaaatttcgtccctctttccggttaatcactgccacatca 4227132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 12644244 - 12644101
Alignment:
Q  85 tattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 184  Q
    |||||| ||| |||||||||| ||||||||||| |  ||||| ||||||||||||||||||||||||| |||||||||||||||||||| | | | ||||    
T  12644244 tattttttttaagcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaa 12644145  T
Q  185 aattaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||||| |||||||| |||| |||  ||||||||||    
T  12644144 aattaatcatttaaaatttcgtccctcttcccggttaatcactg 12644101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 12643101 - 12643232
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| |  ||||||||| |||||    
T  12643101 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaaccattt 12643200  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
    || |||||||| |||| |||  ||||||||||    
T  12643201 aaaatttcgtccctcttcccgattaatcactg 12643232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 47558031 - 47558166
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||  |  |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||| |||||    
T  47558031 gcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccattt 47558130  T
Q  197 aagatttcgtcactctccccacttaatcactgtcac 232  Q
    || |||||||| |||| |||  ||||||||||||||    
T  47558131 aaaatttcgtccctcttcccgattaatcactgtcac 47558166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 4226126 - 4226257
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||||||||||||| |||| || ||| |||||||||||| ||||||||||| | ||||||||||||||||    
T  4226126 gcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcattt 4226225  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
    || ||||||||  ||| |||  ||||||||||    
T  4226226 aaaatttcgtccttcttcccggttaatcactg 4226257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 7158232 - 7158331
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| | |||| |||||||||||    
T  7158232 gcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcattt 7158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 12929288 - 12929387
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  12929288 gcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 12929387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 12930773 - 12930872
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |  ||| |||||||||||    
T  12930773 gcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcattt 12930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 45914527 - 45914656
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||  || ||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||| | ||||||||||||||||    
T  45914527 gcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttgccc-tgtaaaaattaatcattt 45914624  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
    || |||||||| |||| |||  ||||||||||    
T  45914625 aaaatttcgtccctcttcccgattaatcactg 45914656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 37284110 - 37284190
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37284110 gcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 37284190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 37289409 - 37289329
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  37289409 gcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgccc 37289329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 27479988 - 27480119
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||| ||||||||||||||  |||||||||||||||||| |||||||||||||| ||||||||| | |||  | |||||||||    
T  27479988 gcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcattt 27480087  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | | |||||| |||| ||||  |||||||||    
T  27480088 gaaagttcgtccctcttcccagataatcactg 27480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 22661362 - 22661438
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| || |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgccc 22661438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 43123398 - 43123451
Alignment:
Q  280 gaaaagaccattatacctctgtgttcatcttctcaaaatcttccctccttcact 333  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  43123398 gaaaagaccattatacccatgtgttcatcttcttaaaatcttccctccttcact 43123451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 27480846 - 27480766
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||| |||  ||||||||||| |||||||||||    
T  27480846 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgccc 27480766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 31695709 - 31695637
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    ||||| ||||||||||| ||||| |||||| |||||||  |||||||||| |||||||||||||| |||||||    
T  31695709 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 31695637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 2640515 - 2640448
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  2640515 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 2640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 5457244 - 5457177
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||  |||| |||||||||| ||| |||||||||||||||||||||    
T  5457244 ttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagctgacgtggc 5457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 32053480 - 32053429
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  32053480 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 32053429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 31694476 - 31694546
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    ||||| ||||||||||| ||||| ||||| ||||||||  |||||||||| || |||||||||||||||||    
T  31694476 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 31694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 23181331 - 23181264
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||  ||||| ||| | |||||||||    
T  23181331 ttaatcatttaaaatttcgtccctctctccacttaatcactgtcatgtcactaatttgatgacgtggc 23181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 24388910 - 24388977
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||| |||| |||||||| |||||||||||||||||||| ||||||||  ||| | |||||||||    
T  24388910 ttaatcacttaaaatttcgtccctctccccacttaatcactgccacatcaccaatttgatgacgtggc 24388977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 28469345 - 28469278
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||  ||| ||||| ||| | |||||||||    
T  28469345 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 28469278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 40379860 - 40379927
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||||||||||||||| || ||| ||||| ||| | |||||||||    
T  40379860 ttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaatttgatgacgtggc 40379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 43937895 - 43937994
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| |||||| || |||||| ||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  43937895 gcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 43937994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 43938277 - 43938178
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||||||||| |||| ||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  43938277 gcttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 43938178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 3914229 - 3914294
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||| || |||||||||||| ||||||||| ||| | |||||||    
T  3914229 ttaatcatttaaaatttcgtccctcttccaacttaatcactgccacatcactaatttgatgacgtg 3914294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 6571104 - 6571149
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 232  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  6571104 ttaatcatttaaaattttgtccctctccccacttaatcactgtcac 6571149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 17102111 - 17102152
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  17102111 ttaatcatttaaaatttcgtccctctccccacttaatcactg 17102152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 27396932 - 27396891
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  27396932 ttaatcatttaaaatttcgtccctctccccacttaatcactg 27396891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 27991830 - 27991871
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  27991830 ttaatcatttaaaatttcgtccctctccccacttaatcactg 27991871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 30948466 - 30948425
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactg 30948425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 32680901 - 32680860
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatcactg 32680860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 42731510 - 42731551
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  42731510 ttaatcatttaaaatttcgtccctctccccacttaatcactg 42731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 45010941 - 45010900
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  45010941 ttaatcatttaaaatttcgtctctctccccacttaatcactg 45010900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 22539308 - 22539252
Alignment:
Q  209 ctctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattg 265  Q
    ||||||||||||||||||| |||| ||||| |||||||||||| || ||||| ||||    
T  22539308 ctctccccacttaatcactctcacgtcacttattagctgacgtagcactgttgattg 22539252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 37563709 - 37563657
Alignment:
Q  125 tataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||    
T  37563709 tataggccatttgaattttcgtccctgaagttactaatccttccaatttgccc 37563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 10935885 - 10935952
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||| |||||||||||||| ||  ||||| ||| | |||||||||    
T  10935885 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtggc 10935952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 11397464 - 11397531
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgac 249  Q
    |||| |||||||||||| |||| ||| |||  |||| |||||||||||||| ||||| ||||||||||    
T  11397464 aaaatttaatcatttaaaatttagtctctcatcccaattaatcactgtcacgtcactaattagctgac 11397531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 5280636 - 5280586
Alignment:
Q  115 tccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  5280636 tccttgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 5280586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 7159297 - 7159235
Alignment:
Q  111 ttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    ||||||| ||||| |||||  ||||||| ||||| | |||||| |||||||||||||||||||    
T  7159297 ttcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccatttt 7159235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 12931108 - 12931022
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||| ||| ||||| ||| || ||||||| ||||| |||||||| ||||||||||| ||| | |||||||  ||| |||||||||||    
T  12931108 tttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcattt 12931022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 15827915 - 15827981
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||||    
T  15827915 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 15827981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 37563377 - 37563423
Alignment:
Q  119 tgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  37563377 tgcaaatataggccatttgaattttcgtccctgaatttactaatcct 37563423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 22871614 - 22871573
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  22871614 ttaatcatttaaaatttcttccctctccccacttaatcactg 22871573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 32299042 - 32299001
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    ||||||||| || |||||||| ||||||||||||||||||||    
T  32299042 ttaatcattgaaaatttcgtccctctccccacttaatcactg 32299001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 34928956 - 34928915
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  34928956 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 34928915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 37656949 - 37657010
Alignment:
Q  193 atttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||| |||||||| |||||||||||||||||| | ||| ||||| ||| | |||||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatcaccggcacgtcactaatttgatgacgtggc 37657010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 39686840 - 39686799
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  39686840 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 39686799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 40022615 - 40022551
Alignment:
Q  109 atttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 174  Q
    ||||||||| ||||| ||||| | ||||||  |||||||||||| |||||||||||| ||||||||    
T  40022615 atttcatccctgcaaatatagtc-atttgaaatttcatccctgatcttactaatccttccattttg 40022551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 45010689 - 45010730
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  45010689 ttaatcatttaaaatttcgtccatctccccacttaatcactg 45010730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 13311375 - 13311323
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacat 234  Q
    |||| ||||| |||||| |||||||| ||||||| |||||||||||| |||||    
T  13311375 aaaatttaataatttaaaatttcgtccctctcccgacttaatcactgccacat 13311323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 88 - 236
Target Start/End: Complemental strand, 25624541 - 25624393
Alignment:
Q  88 tttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaat 187  Q
    |||||||| ||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||    
T  25624541 tttattttggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaat 25624442  T
Q  188 taatcatttaagatttcgtcactctccccacttaatcactgtcacatca 236  Q
    ||||||||||| |||||||| |||| |||  |||||||||| |||||||    
T  25624441 taatcatttaaaatttcgtccctctacccggttaatcactgccacatca 25624393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 25623289 - 25623420
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  25623289 gcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 25623388  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
    || |||||||| |||| |||  ||||||||||    
T  25623389 aaaatttcgtccctctacccggttaatcactg 25623420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 24387352 - 24387451
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  24387352 gcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcattt 24387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 24388355 - 24388255
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||| ||||||||||  | ||||||||||||||||    
T  24388355 gcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcattt 24388256  T
Q  197 a 197  Q
    |    
T  24388255 a 24388255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 20101758 - 20101851
Alignment:
Q  85 tattttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| ||||||| |||||||| || |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20101758 tatttaattttaggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 20101851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 20982525 - 20982605
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  20982525 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 20982605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 29957818 - 29957898
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  29957818 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 29957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 20983371 - 20983280
Alignment:
Q  86 attttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| |||| ||||||||| || |||||||| || |||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  20983371 atttttttttggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgccc 20983280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 29958646 - 29958515
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||||||| || ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||  | |||||||||    
T  29958646 gcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatcattt 29958547  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | | |||||| |||| |||  ||||||||||    
T  29958546 gaaagttcgtctctcttcccggttaatcactg 29958515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 20103243 - 20103161
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccat 179  Q
    ||||||||| || ||| |||| || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  20103243 gcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccat 20103161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 43236509 - 43236577
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 169  Q
    ||||| |||||| |||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  43236509 aaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctccca 43236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 19620882 - 19620793
Alignment:
Q  107 gcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||| ||| | ||| |||||| |||||||  ||||||||||||||||||||||||| ||||||||||| |  ||| |||||||||||    
T  19620882 gcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcattt 19620793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 36755184 - 36755249
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||| | |||||||    
T  36755184 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatttgatgacgtg 36755249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 11721432 - 11721371
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||| |||| |||||||| |||||||||||||||||||||||| ||||| ||||    
T  11721432 aaaatttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatta 11721371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 37895684 - 37895619
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  37895684 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 37895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 23206496 - 23206428
Alignment:
Q  108 catttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||||||| |||||| |||||| |||||||  |||||||| |||| |||||||||||| |||||||||    
T  23206496 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgcc 23206428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 23678100 - 23678032
Alignment:
Q  108 catttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||||||| |||||| |||||| |||||||  |||||||| |||| |||||||||||| |||||||||    
T  23678100 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgcc 23678032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 43237815 - 43237747
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 169  Q
    ||||| ||||||  ||| ||||| ||||||||||||||  ||| |||||||||||||||||||||||||    
T  43237815 aaatatgcattttgtccctgcaaatataggccatttgaaattttatccctgaacttactaatcctccca 43237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 10446833 - 10446932
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  10446833 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 15848179 - 15848230
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  15848179 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 15848230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 17266484 - 17266535
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||| |||||||||||| |||| ||| |||||||||||||||||||||||||    
T  17266484 aaaatttaatcatttaaaatttggtccctctccccacttaatcactgtcaca 17266535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 25893555 - 25893468
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatga 274  Q
    |||||||||||| | |||||  |||||||| ||||||||||| ||| || || ||||||||||||||| ||||| ||| || ||||||    
T  25893555 ttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattagctgacgtggcgctgttaattagtcaaatga 25893468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 36382252 - 36382319
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  36382252 ttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 36382319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 39423606 - 39423673
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  39423606 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggc 39423673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 10840562 - 10840624
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattag 244  Q
    |||| ||||||||||||  ||||||| |||| ||||||||||||||||||| ||||| |||||    
T  10840562 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtcactaattag 10840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 16367333 - 16367247
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  16367333 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 16367247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 21103108 - 21103150
Alignment:
Q  123 attataggccatttgatttttcatccctgaacttactaatcct 165  Q
    |||||||||| |||| |||||||||||||||||||||||||||    
T  21103108 attataggccgtttggtttttcatccctgaacttactaatcct 21103150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 1696046 - 1696001
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 232  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  1696046 ttaatcgtttaaaatttcgtccctctccccacttaatcactgtcac 1696001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 6657969 - 6658010
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  6657969 ttaatcatttaaaatttcgtccctctccccacttaatcactg 6658010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 9694125 - 9694048
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 174  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||||||    
T  9694125 gcttaaataggtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttg 9694048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 11163360 - 11163319
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  11163360 ttaatcatttaaaatttcgtccctctccccacttaatcactg 11163319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 14900789 - 14900748
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatcactg 14900748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 16099146 - 16099187
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  16099146 ttaatcatttaaaatttcgtccctctccccacttaatcactg 16099187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 33739794 - 33739835
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactg 33739835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 34447904 - 34447968
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    ||||| |||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||    
T  34447904 ttaataatttaa-atttcgtctctctccccacttaatcactgccacatcactaatttgatgacgtg 34447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 39498401 - 39498442
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  39498401 ttaatcatttaaaatttcgtccctctccccacttaatcactg 39498442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 44714098 - 44714057
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  44714098 ttaatcatttaaaatttcgtccctctccccacttaatcactg 44714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 1149938 - 1150006
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| | ||||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  1149938 gcttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 1150006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 17266672 - 17266624
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtc 230  Q
    |||| |||||||||||| ||||||||| |||||||||||||||| ||||    
T  17266672 aaaatttaatcatttaaaatttcgtcattctccccacttaatcattgtc 17266624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 6573656 - 6573719
Alignment:
Q  211 ctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatga 274  Q
    |||||| ||||||||||| ||| || || ||||||||||||||| ||||| |||||| ||||||    
T  6573656 ctccccccttaatcactgccacgtccctaattagctgacgtggcgctgttaattggtcaaatga 6573719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 10712814 - 10712881
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| ||||| || |||||||||||||||||||  ||| ||||| ||| | |||||||||    
T  10712814 ttaatcatttaaaatttcatccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 10712881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 20911131 - 20911230
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  20911131 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 20911230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 7981070 - 7981120
Alignment:
Q  119 tgcaattataggccatttgatttttcatccctgaacttactaatcctccca 169  Q
    ||||| |||||| |||||||  ||||||||| |||||||||||||||||||    
T  7981070 tgcaactataggtcatttgaaatttcatccccgaacttactaatcctccca 7981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 28599441 - 28599527
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||| ||||||||| |||||  ||||||| ||||| ||| |||| ||||||||||| ||||||||||  |  ||| |||||||||||    
T  28599441 tttcgtccttgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcattt 28599527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 2318249 - 2318314
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| ||||||||||||||| | || ||| ||||| ||| | |||||||    
T  2318249 ttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcactaatttgatgacgtg 2318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 6573137 - 6573182
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 232  Q
    |||||||||||| | |||||| |||||||| |||||||||||||||    
T  6573137 ttaatcatttaaaaattcgtccctctccccccttaatcactgtcac 6573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 11349550 - 11349477
Alignment:
Q  179 tataaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    ||||||| |||||||||||| |||||||| |||  |||| ||||||| || ||| ||  |||||||||||||||    
T  11349550 tataaaatttaatcatttaaaatttcgtccctcaacccagttaatcagtgccacgtctttgattagctgacgtg 11349477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 11689627 - 11689688
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||| |||| ||||||||  ||||||||||||||||||| ||| ||||| ||||    
T  11689627 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 11689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 13995979 - 13995938
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  13995979 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 13995938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 17580505 - 17580452
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    |||||||||||||| |||||  ||||||| ||||| |||||||| |||||||||    
T  17580505 tttcatccttgcaaatatagatcatttgaattttcgtccctgaagttactaatc 17580452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 33062356 - 33062315
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  33062356 ttaatcatttataatttcgtccctctccccacttaatcactg 33062315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 33882981 - 33882892
Alignment:
Q  88 tttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    |||||||||| || ||||| ||||||||||| ||||| |||| | |||||||  ||||||   |||  ||||||||||||||||||||||    
T  33882981 tttattttagactaaaatatgcatttcatccctgcaaatataaggcatttgaaatttcatatatgaggttactaatcctcccattttgcc 33882892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 36479809 - 36479850
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  36479809 ttaatcatttaaaatttcgtccatctccccacttaatcactg 36479850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 41248865 - 41248824
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  41248865 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 41248824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 7983905 - 7983837
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 169  Q
    ||||| ||||||||||   |||| |||||| |||||||  |||||||  ||||||||||||||||||||    
T  7983905 aaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 32519156 - 32519224
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  32519156 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatcct 32519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 44044204 - 44044272
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| ||| |||||||||||||||| ||||    
T  44044204 attaatcatttaaaatttcgtccctgagcccaattaattactgccacgtcactgattagctgacatggc 44044272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 22870561 - 22870430
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  22870561 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 22870462  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
    || |||||||| |||| |||  ||||||||||    
T  22870461 aaaatttcgtctctcttcccgattaatcactg 22870430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 22869616 - 22869737
Alignment:
Q  107 gcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaagatttcgt 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||| |||||||    
T  22869616 gcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatttcgt 22869715  T
Q  207 cactctccccacttaatcactg 228  Q
    | |||| |||  ||||||||||    
T  22869716 ccctcttcccggttaatcactg 22869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 20856933 - 20857064
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  20856933 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcattt 20857032  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | |||||||| |||| |||  ||||||||||    
T  20857033 gaaatttcgtccctcttcccggttaatcactg 20857064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 31107932 - 31108008
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31107932 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 31108008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 14744829 - 14744730
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  14744829 gcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 14744730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 20857646 - 20857515
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||| || ||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||| | ||||| ||||||||||    
T  20857646 gcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcattt 20857547  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | |||||||| |||| |||  ||||||||||    
T  20857546 gaaatttcgtccctcttcccggttaatcactg 20857515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 36476770 - 36476905
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 200  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||  | ||||||||| | |    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  201 tttcgtcactctccccacttaatcactgtcacatca 236  Q
     |||||| |||| ||||  ||||||||| |||||||    
T  36476870 gttcgtccctcttcccagataatcactgccacatca 36476905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 21979070 - 21978971
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||| |||||  || | ||||||||||| ||||    
T  21979070 gcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaataattt 21978971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 36477471 - 36477356
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 200  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| | |||  | ||||||||| | |    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  201 tttcgtcactctcccc 216  Q
     |||||| ||||||||    
T  36477371 gttcgtccctctcccc 36477356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 20072968 - 20072888
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  20072968 gcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgccc 20072888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 39181058 - 39181138
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  39181058 gcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgccc 39181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 20072122 - 20072253
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||  || ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||| | |||  | |||||||||    
T  20072122 gcttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcattt 20072221  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | | |||||| |||| ||||  |||||||||    
T  20072222 gaaagttcgtccctcttcccagataatcactg 20072253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 16532898 - 16532974
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgccc 16532974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 21978112 - 21978036
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| || |||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgccc 21978036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 8654108 - 8654185
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 174  Q
    ||||||||| |  |||||||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  8654108 gcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttg 8654185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 39181900 - 39181815
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||| ||||||||| |  ||| |||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  39181900 ttttggcttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgccc 39181815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 8673853 - 8673777
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| ||||||||||| ||||| ||||||||||||||  |||||||| ||||||| ||||| ||||||||||||||    
T  8673853 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgccc 8673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 16533724 - 16533644
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| |  ||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||||    
T  16533724 gcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgccc 16533644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 39402210 - 39402148
Alignment:
Q  134 tttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |  ||| |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcattt 39402148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 14849049 - 14848976
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtggc 254  Q
    |||| |||||||||||| |||| ||| ||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  14849049 aaaatttaatcatttaaaatttggtccctcaccccacttaatcactgccacatcactagattagctgacgtggc 14848976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 13962955 - 13963022
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||| ||||| ||| | |||||||||    
T  13962955 ttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaatttgatgacgtggc 13963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 19892645 - 19892578
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  19892645 ttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcactaatttgatgacgtggc 19892578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 35512239 - 35512290
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  35512239 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcact 35512290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 38442159 - 38442226
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||| ||| ||| | |||||||||    
T  38442159 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacataactaatttgatgacgtggc 38442226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 21972104 - 21972168
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgc 175  Q
    |||||||| || |||||| |||||||||||||||||| ||| | ||||||||||||||||||||||    
T  21972104 tttcatccctgtaattatgggccatttgatttttcat-cctcagcttactaatcctcccattttgc 21972168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 29646699 - 29646634
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||    
T  29646699 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtg 29646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 31108434 - 31108338
Alignment:
Q  99 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||| | ||||||||| ||||| ||||| | |||||||||||||||| |||||||||||||| | |||||||  || | |||| |||||||||||    
T  31108434 ttaaatatgtatttcatccctgcaaatatagac-atttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcattt 31108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 32242333 - 32242398
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  32242333 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 32242398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 8322495 - 8322539
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 231  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  8322495 ttaatcatttaaaatttcgtccctctccccacttaatcactgtca 8322539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 25253086 - 25253186
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    |||||||||| |  |||||||| ||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| ||||||||||    
T  25253086 agcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 25253185  T
Q  196 t 196  Q
    |    
T  25253186 t 25253186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 25316876 - 25316976
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    |||||||||| |  |||||||| ||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| ||||||||||    
T  25316876 agcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 25316975  T
Q  196 t 196  Q
    |    
T  25316976 t 25316976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 35920521 - 35920477
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 231  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  35920521 ttaatcatttaaaatttcgtccctctccccacttaatcactgtca 35920477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 5024355 - 5024304
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||||||    
T  5024355 ttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcact 5024304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 11047528 - 11047595
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  11047528 ttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtcactaatttgatgacgtggc 11047595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 13362565 - 13362498
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||| ||| ||||||||||||||||||||  |||||||| ||| | |||||||||    
T  13362565 ttaatcatttaaaatttagtctctctccccacttaatcactgctacatcactaatttgatgacgtggc 13362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 14745449 - 14745548
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  14745449 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 14745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 37944995 - 37945094
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| |||||||||||    
T  37944995 gcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 37945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 39453391 - 39453458
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  39453391 ttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcactaatttgatgacgtggc 39453458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 21260879 - 21260965
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||||||||  |  ||| |||||||||||    
T  21260879 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcattt 21260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 38475336 - 38475290
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  38475336 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 38475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 297320 - 297279
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactg 297279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 3529179 - 3529138
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  3529179 ttaatcatttaaaatttcgtccctctccccacttaatcactg 3529138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 5993980 - 5994021
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  5993980 ttaatcatttaaaatttcgtccctctccccacttaatcactg 5994021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 6758171 - 6758130
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatcactg 6758130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 14194760 - 14194719
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  14194760 ttaatcatttaaaatttcgtccctctccccacttaatcactg 14194719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 28269725 - 28269684
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28269725 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28269684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 28771175 - 28771134
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28771175 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28771134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 31482708 - 31482667
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactg 31482667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 41930607 - 41930648
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatcactg 41930648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 12904840 - 12904896
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||| ||||| |||||| |||||||| ||||||||||||||||| |||||| |||||    
T  12904840 aaaatttaataatttaaaatttcgtccctctccccacttaatcaatgtcacgtcact 12904896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 33735342 - 33735382
Alignment:
Q  125 tataggccatttgatttttcatccctgaacttactaatcct 165  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  33735342 tataggccatttgatttttcgtccctgaaattactaatcct 33735382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 10684030 - 10684097
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||| |||||| ||| ||||||||||||||||  ||||| ||| | |||||||||    
T  10684030 ttaatcatttaaaattttgtcactttcctcacttaatcactgtcatgtcactaatttgatgacgtggc 10684097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 32052607 - 32052508
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  32052607 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 32052508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 33735696 - 33735597
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  33735696 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 33735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 6150545 - 6150583
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatca 225  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  6150545 ttaatcatttaaaatttcgtccctctccccacttaatca 6150583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 7015509 - 7015575
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||||||| |||| |||||||||    
T  7015509 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatc 7015575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 24547462 - 24547412
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcac 237  Q
    |||||||||||| |||||||| |||||||||||||| ||||| ||| ||||    
T  24547462 ttaatcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 31118969 - 31119019
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttacta 160  Q
    |||| ||| ||||| |||||||||||||| |||||||||||||| ||||||    
T  31118969 tttcgtccctgcaaatataggccatttgaattttcatccctgaagttacta 31119019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 1506058 - 1506099
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  1506058 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 1506099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 27587239 - 27587280
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||| ||||||||||    
T  27587239 ttaatcatttaaaatttcgtccctctccccatttaatcactg 27587280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 186510 - 186550
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcact 227  Q
    |||||||||||| |||||||| ||| |||||||||||||||    
T  186510 ttaatcatttaaaatttcgtccctccccccacttaatcact 186550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 18934713 - 18934793
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    |||||||||| |  |||||||| ||||| |||| | ||||||| ||||| ||| |||| |||||||||||  |||||||||    
T  18934713 agcttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgcc 18934793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 19892294 - 19892338
Alignment:
Q  83 tttattttattttag-cttaaatacgcatttcatccttgcaatta 126  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||    
T  19892294 tttattttattttagacttaaatatgtatttcatccttgcaatta 19892338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 25253469 - 25253401
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  25253469 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 25253401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 25317260 - 25317192
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  25317260 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 25317192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 29193092 - 29192957
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||| ||||    
T  29193092 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaattattt 29192993  T
Q  197 aagatttcgtcactctccccacttaatcactgtcac 232  Q
    || |||| ||| |||| |||  ||||||||||||||    
T  29192992 aaaattttgtccctcttcccgattaatcactgtcac 29192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 32717204 - 32717073
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||    
T  32717204 gcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcattt 32717105  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
    || |||||||| |||| |||| ||||| ||||    
T  32717104 aaaatttcgtccctcttcccaattaattactg 32717073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 29192040 - 29192167
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 200  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||| || |||||||| | |||||||||||||||||| |    
T  29192040 aaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaa 29192139  T
Q  201 tttcgtcactctccccacttaatcactg 228  Q
    ||||||| |||| |||  ||||||||||    
T  29192140 tttcgtccctcttcccgattaatcactg 29192167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 45279388 - 45279303
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||| ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  45279388 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 45279303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 48189198 - 48189118
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  48189198 gcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgccc 48189118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 37249204 - 37249319
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 200  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| | |||  | ||||||||| | |    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  201 tttcgtcactctcccc 216  Q
     |||||| ||||||||    
T  37249304 gttcgtccctctcccc 37249319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 44476063 - 44476130
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44476063 tttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgccc 44476130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 11026736 - 11026651
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||| ||||||||| || |||||||| || ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  11026736 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgccc 11026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 2943914 - 2944045
Alignment:
Q  97 gcttaaatacgcatttc-atccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    ||||||||| || |||| |||| |||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||| | ||||| |||||||||    
T  2943914 gcttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcc-tgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 2944012  T
Q  196 taagatttcgtcactctccccacttaatcactg 228  Q
    | | | |||||| |||| |||  ||||||||||    
T  2944013 tgaaagttcgtccctcttcccggttaatcactg 2944045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 2944765 - 2944685
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  2944765 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgccc 2944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 22736789 - 22736709
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| |  |||||||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  22736789 gcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgccc 22736709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 1756564 - 1756631
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  1756564 tttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 1756631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 48188392 - 48188459
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  48188392 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 48188459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 1757403 - 1757323
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  1757403 gcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 1757323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 37249892 - 37249817
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  37249892 aaatatgcttttcatcct-gcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgccc 37249817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 43105250 - 43105314
Alignment:
Q  113 catccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  43105250 catccttgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgccc 43105314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 43105929 - 43105853
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||||  |||||||| || ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  43105929 aaatacgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgccc 43105853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 44482048 - 44481972
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| || |||||||| || |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgccc 44481972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 45278549 - 45278625
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgccc 45278625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 11025963 - 11026069
Alignment:
Q  122 aattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaagatttcgtcactctccccactta 221  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||  |||||  | ||||||||| | | |||||| |||| |||  |||    
T  11025963 aattataagccgtttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtccctcttcccggtta 11026062  T
Q  222 atcactg 228  Q
    |||||||    
T  11026063 atcactg 11026069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 33156331 - 33156264
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||| |||||||||||||||| ||| ||||| |||||||||||||||    
T  33156331 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggc 33156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 23458316 - 23458251
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||    
T  23458316 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 23458251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 9294295 - 9294228
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  9294295 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 9294228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 26463935 - 26463884
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  26463935 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 26463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 33689716 - 33689649
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  33689716 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaattcgatgacgtggc 33689649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 43384374 - 43384441
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  43384374 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 43384441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 19741229 - 19741188
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  19741229 ttaatcatttaaaatttcgtcactctccccacttaatcactg 19741188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 32716284 - 32716365
Alignment:
Q  131 ccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaagatttcgtcactct 212  Q
    ||||||||||||| |||| |||  |||||||||||| |||||| ||| | |||||||||| ||||||| |||||||| ||||    
T  32716284 ccatttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttcgtccctct 32716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 41988048 - 41988104
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||| |||||||||||| |||||||| |||||| ||||||||||||| |||||||||    
T  41988048 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacatcact 41988104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 40758235 - 40758302
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||  ||| ||||| ||| | |||||||||    
T  40758235 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 40758302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 11312929 - 11312995
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  11312929 gcttaaataagtctttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 11312995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 21300327 - 21300393
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  21300327 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 40033793 - 40033747
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||||    
T  40033793 ttaatcatttaaaattttgtccctctccccacttaatcactgtcaca 40033747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 51994223 - 51994173
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcac 237  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||    
T  51994223 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 53037217 - 53037151
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  53037217 gcttaaataggtctttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 53037151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 2796270 - 2796311
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  2796270 ttaatcatttaaaatttcgtccctctccccacttaatcactg 2796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 8041707 - 8041748
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactg 8041748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 10770797 - 10770756
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatcactg 10770756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 21783621 - 21783666
Alignment:
Q  280 gaaaagaccattatacctctgtgttcatcttctcaaaatcttccct 325  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||    
T  21783621 gaaaagaccattatacccatgtgttcatcttcttaaaatcttccct 21783666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 36314604 - 36314563
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36314563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 48322683 - 48322642
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatcactg 48322642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 54466514 - 54466555
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactg 54466555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 40506124 - 40506080
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 231  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||    
T  40506124 ttaatcatttaaaatttcgtctctctccgcacttaatcactgtca 40506080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 55036683 - 55036771
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaa 198  Q
    |||| ||| ||||| |||||| ||||||| ||||||| |||||| ||||||||||| ||| | ||||| |  ||| |||||||||||||    
T  55036683 tttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaa 55036771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 1741388 - 1741487
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  1741388 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcattt 1741487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 25108432 - 25108365
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| ||||||||  ||  | || |||||||||| ||| |||||||||||||||||||||    
T  25108432 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgattagctgacgtggc 25108365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 44654845 - 44654790
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcac 237  Q
    |||| ||||||| |||| |||||||| ||||||||| |||||||||||||| ||||    
T  44654845 aaaatttaatcacttaaaatttcgtccctctccccatttaatcactgtcacgtcac 44654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 25107304 - 25107370
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtgg 253  Q
    |||||||||||| |||||||| |||  | || |||||||||| ||| ||| ||||||||||||||||    
T  25107304 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcagtgattagctgacgtgg 25107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 10998234 - 10998157
Alignment:
Q  119 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  10998234 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10998157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 20704669 - 20704608
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||| |||| |||||||| |||| ||||||||||||| ||||| ||||| ||||    
T  20704669 aaaatttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaatta 20704608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 22735403 - 22735440
Alignment:
Q  140 ttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgccc 22735440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 46474906 - 46474947
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  46474906 ttaatcatttaaaattttgtccctctccccacttaatcactg 46474947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 46670610 - 46670561
Alignment:
Q  125 tataggccatttgatttttcatccctgaacttactaatcctcccattttg 174  Q
    |||||| ||||||| |||||||||||||| |||||||| || ||||||||    
T  46670610 tataggtcatttgaattttcatccctgaagttactaattcttccattttg 46670561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 39399434 - 39399378
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||| |||||||||||| ||||| || ||||||||| |||||||||| ||| |||||    
T  39399434 aaaatttaatcatttaaaatttcatctctctccccagttaatcactgccacgtcact 39399378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 53037028 - 53037096
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||||||| || || |||||| ||||||| ||||| |||||||| |||||||||||    
T  53037028 gcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcct 53037096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 54317973 - 54317917
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||| |||||||||||| |||||||| ||||||| | |||||||||| ||| |||||    
T  54317973 aaaatttaatcatttaaaatttcgtctctctccctaattaatcactgccacgtcact 54317917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 55052585 - 55052545
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcact 227  Q
    |||||||||||| |||||||| ||||||||| |||||||||    
T  55052585 ttaatcatttaaaatttcgtccctctccccatttaatcact 55052545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 39030404 - 39030485
Alignment:
Q  14 gacatcatcctaaataatcaaactaatgtgacccggtcaaaaatatgagaaaacaaattgtgatgtatttttattttatttt 95  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030404 gacaacatcctaaataatcaaactaatgtgacccggtcaaaaatatgagaaaacaaattgtgatgtatttttattttatttt 39030485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 38598965 - 38599064
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||| |||||||||||    
T  38598965 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcattt 38599064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 25288187 - 25288076
Alignment:
Q  86 attttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 184  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |  |||    
T  25288187 attttattttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaa 25288088  T
Q  185 aattaatcattt 196  Q
     |||||||||||    
T  25288087 tattaatcattt 25288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 34213765 - 34213896
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| ||||||||||    
T  34213765 gcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcattt 34213864  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | | |||||| |||| |||  ||||||||||    
T  34213865 gaaagttcgtccctcttcccggttaatcactg 34213896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 1231526 - 1231626
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    |||||||||| ||||||||||| | |||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||| | |||||||||||||||    
T  1231526 agcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcatt 1231625  T
Q  196 t 196  Q
    |    
T  1231626 t 1231626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 7393244 - 7393168
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    |||||||||  |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7393244 gcttaaatagacatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccatttt 7393168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 1232896 - 1232799
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||    ||||||||||||||||| | ||||||||||||||||    
T  1232896 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcattt 1232799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 34665771 - 34665851
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34665771 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 34665851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 33497715 - 33497635
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  33497715 gcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgccc 33497635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 34214628 - 34214488
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttca-tccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| | |||  | ||||||||    
T  34214628 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 34214529  T
Q  196 taagatttcgtcactctccccacttaatcactgtcacatca 236  Q
    | | | |||||| |||| |||   ||||||||| |||||||    
T  34214528 tgaaagttcgtccctcttcccgaataatcactgccacatca 34214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 4463525 - 4463455
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcc 167  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  4463525 gcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcc 4463455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 34666614 - 34666559
Alignment:
Q  122 aattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34666614 aattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 34666559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 4970130 - 4970206
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||| ||||||||||| ||||||||  || |||||||  ||||||||||||||||||||||||| |||||||||||    
T  4970130 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgccc 4970206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 24377186 - 24377258
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    ||||| ||||||||| ||||||||||  || |||||||  |||||||||||||||||||||||||||||||||    
T  24377186 aaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttt 24377258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 24379085 - 24379015
Alignment:
Q  107 gcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||||| ||||||||  || |||||||| |||||||| |||||||||||||||||| |||||||||    
T  24379085 gcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgccc 24379015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 29574747 - 29574819
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    ||||| ||||||||||| ||||| |||||| |||||||  |||||||||| |||||||||||||| |||||||    
T  29574747 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 29574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 16388863 - 16388796
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  16388863 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 16388796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 27437618 - 27437539
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||||||| ||||||||||| ||||| |||||||| ||||| ||||| |||||||| ||||||||| |  |||||||||    
T  27437618 gcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27437539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 33497042 - 33497097
Alignment:
Q  122 aattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||    
T  33497042 aattataggtcatttgatttttcattcttgaacttactaatccttccattttgccc 33497097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 29575980 - 29575910
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    ||||| ||||||||||| ||||| ||||| ||||||||  |||||||||| || |||||||||||||||||    
T  29575980 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 29575910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 23698581 - 23698536
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 232  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  23698581 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcac 23698536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 36928567 - 36928632
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  36928567 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 36928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 2693859 - 2693787
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtgg 253  Q
    |||| |||||||||||| |||| || |||| |||||||||||||||||||| ||||| |||||| ||||||||    
T  2693859 aaaatttaatcatttaaaatttggttactccccccacttaatcactgtcacgtcactagattagatgacgtgg 2693787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 30712055 - 30711987
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| |||||||||||||||||||||||||    
T  30712055 attaatcatttaaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggc 30711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 30719832 - 30719764
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| |||||||||||||||||||||||||    
T  30719832 attaatcatttaaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggc 30719764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 36574822 - 36574890
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 169  Q
    ||||| ||||||||||  ||||  |||||| |||||||  |||||||||||||||||||||||||||||    
T  36574822 aaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctccca 36574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 4405997 - 4405946
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||| |||||    
T  4405997 ttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcact 4405946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 173
Target Start/End: Original strand, 7392250 - 7392285
Alignment:
Q  138 atttttcatccctgaacttactaatcctcccatttt 173  Q
    ||||||||||||||||||||||||||||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccatttt 7392285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 9632347 - 9632406
Alignment:
Q  115 tccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 174  Q
    ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||||||    
T  9632347 tccttgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttg 9632406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 12199257 - 12199210
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  12199257 attaatcatttaaaatttcgtctctctccccacttaatcactgccaca 12199210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 12443685 - 12443638
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  12443685 attaatcatttaaaatttcgtctctctccccacttaatcactgccaca 12443638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 13186151 - 13186202
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  13186151 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 13186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 27436564 - 27436643
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 176  Q
    ||||||||| ||||||||||| ||||| |||||| | ||||| ||||| |||||||| ||||||||| |  |||||||||    
T  27436564 gcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27436643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 35756673 - 35756740
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  35756673 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggc 35756740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 31608849 - 31608799
Alignment:
Q  188 taatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 31608799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 37342976 - 37343042
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  37342976 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 38862709 - 38862755
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  38862709 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 38862755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 43866901 - 43866835
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  43866901 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 1425359 - 1425318
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  1425359 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1425318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 3041762 - 3041721
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactg 3041721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 20096394 - 20096325
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccat 179  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||    
T  20096394 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccat 20096325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 23663851 - 23663810
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  23663851 ttaatcatttaaaatttcgtccctctccccacttaatcactg 23663810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 36186404 - 36186339
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||||||||||| |||||||| ||||||| |||||||||||| ||||| ||| ||| | |||||||    
T  36186404 ttaatcatttaaaatttcgtccctctccctacttaatcactgccacattactaatttgatgacgtg 36186339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 36325325 - 36325366
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36325366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 38845605 - 38845564
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactg 38845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 39071767 - 39071808
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  39071767 ttaatcatttaaaatttcgtccctctccccacttaatcactg 39071808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 40775956 - 40775915
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactg 40775915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 44407163 - 44407122
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatcactg 44407122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 20385658 - 20385726
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| ||| |||||||||||||||||||||    
T  20385658 attaatcatttaaaatttcgtccctgagcccagttaattactgccacgtcactgattagctgacgtggc 20385726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 20386768 - 20386700
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| |||||||| ||   |||| ||||  |||| |||||||||||||||||||||||||    
T  20386768 attaatcatttaaaatttcgtccctgagcccagttaactactgccacatcactgattagctgacgtggc 20386700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 30710945 - 30711013
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||||||| ||||||||||| |||||||||    
T  30710945 attaatcatttaaaatttcgtccctgagcccagttaattactgtcacgtcactgattagttgacgtggc 30711013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 36623353 - 36623421
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  36623353 gcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcct 36623421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 38600333 - 38600265
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| ||||||| ||| ||||| |||||| |||||||  |||| |||||||| |||||||||||    
T  38600333 gcttaaataggcatttcgtccctgcaaatataggtcatttgaaatttcgtccctgaagttactaatcct 38600265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 40422543 - 40422475
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  40422543 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 40422475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 7776 - 7677
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| ||| |||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  7776 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatcattt 7677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 22890330 - 22890275
Alignment:
Q  188 taatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||||| |||| |||| ||| |||| ||||||||||||||||||||||||| ||||    
T  22890330 taatcacttaaaattttgtccctcttcccacttaatcactgtcacatcactaatta 22890275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 36576088 - 36576029
Alignment:
Q  109 atttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccc 168  Q
    ||||||||| || || |||| |||||||||  |||||||||||||||||| |||||||||    
T  36576088 atttcatccctgtaaatataagccatttgaaatttcatccctgaacttaccaatcctccc 36576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 36623736 - 36623637
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | ||||| |  ||| |||||||||||    
T  36623736 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 36623637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 43866712 - 43866811
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | ||||| |  ||| |||||||||||    
T  43866712 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 43866811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 547629 - 547695
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||| |||||||||||| ||||||| ||||| ||| |||| |||||||||    
T  547629 gcttaaataggtctttcatccctgcaattataggtcatttgaattttcgtccttgaagttactaatc 547695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 27857112 - 27857026
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||| |  ||| |||||||||||    
T  27857112 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcattt 27857026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 2266583 - 2266624
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  2266583 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 2266624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 8316925 - 8316884
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  8316925 ttaatcatttaaaatttcgtccatctccccacttaatcactg 8316884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 12273190 - 12273149
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| |||| |||||||||||||||    
T  12273190 ttaatcatttaaaatttcgtccctcttcccacttaatcactg 12273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 22915695 - 22915654
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||| |||| ||||||||||||||||||||    
T  22915695 ttaatcatttaaaattccgtccctctccccacttaatcactg 22915654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 23424873 - 23424796
Alignment:
Q  119 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||| |  ||| |||||||||||    
T  23424873 tgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcattt 23424796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 24085860 - 24085921
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||  |||| |||| ||| |||||||||||||||||||||||| ||||| ||||    
T  24085860 aaaatttaatcgcttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 24085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 35449915 - 35449874
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||| ||||||||||    
T  35449915 ttaatcatttaaaatttcgtccctctccccatttaatcactg 35449874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 31873241 - 31873169
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||| |||||||||||| |||| ||  |||| |||||||||||||||  |||||||| ||| | |||||||||    
T  31873241 aaaatttaatcatttaaaattttgttcctcttcccacttaatcactgctacatcactaatttgatgacgtggc 31873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 33401225 - 33401126
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  33401225 gcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcattt 33401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 4117646 - 4117507
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  4117646 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcattt 4117547  T
Q  197 aagatttcgtcactctccccacttaatcactgtcacatca 236  Q
     | | |||||| |||| | |  |||||||||| |||||||    
T  4117546 gaaaattcgtccctcttctcggttaatcactgccacatca 4117507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 14656481 - 14656612
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| ||||||||||    
T  14656481 gcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcattt 14656580  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | | |||||| |||| |||  ||||||||||    
T  14656581 gaaagttcgtccctcttcccggttaatcactg 14656612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 17784484 - 17784385
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| || |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||| |||||||||||    
T  17784484 gcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcattt 17784385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 4116800 - 4116937
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  4116800 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcattt 4116899  T
Q  197 aagatttcgtcactctccccacttaatcactgtcacat 234  Q
     | | |||||| |||| | |  |||||||||| |||||    
T  4116900 gaaaattcgtccctcttctcggttaatcactgccacat 4116937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 8427459 - 8427384
Alignment:
Q  102 aatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgccc 8427384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 33399962 - 33400047
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||| ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  33399962 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 33400047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 1661516 - 1661453
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  1661516 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccatttt 1661453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 14657308 - 14657228
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| |  ||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||    
T  14657308 gcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgccc 14657228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 8427201 - 8427281
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| ||||| || || || |||||||||||||||||||||||    
T  8427201 gcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgccc 8427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 23291744 - 23291844
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    |||||||||| |  |||| ||| | ||| |||||||||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| ||||||||||    
T  23291744 agcttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 23291843  T
Q  196 t 196  Q
    |    
T  23291844 t 23291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 13480209 - 13480308
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  13480209 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 13480308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 13480591 - 13480492
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| || ||| |||||||||||    
T  13480591 gcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcattt 13480492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 21628050 - 21627983
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  21628050 ttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 21627983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 30803952 - 30804019
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  30803952 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatctcactaatttgatgacgtggc 30804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 33517625 - 33517692
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||||||||||||||||||  || ||||| ||| | |||||||||    
T  33517625 ttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcactaatttgatgacgtggc 33517692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 33647054 - 33647121
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||||||| |||||||||| ||| ||||| ||| | |||||||||    
T  33647054 ttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatttgatgacgtggc 33647121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 12080727 - 12080768
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  12080727 ttaatcatttaaaatttcgtccctctccccacttaatcactg 12080768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 28000691 - 28000650
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28000650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 30337540 - 30337581
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatcactg 30337581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 679956 - 680024
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| ||||||||  |   |||| ||||| |||| |||||||||||||||||||||||||    
T  679956 attaatcatttaaaatttcgtccatgagcccagttaattactgccacatcactgattagctgacgtggc 680024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 5064371 - 5064435
Alignment:
Q  132 catttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||||||| |  ||| |||||||||||    
T  5064371 catttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcattt 5064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 30725850 - 30725917
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||||||||| |||||||||| ||  ||||| ||| | |||||||||    
T  30725850 ttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcactaatttgatgacgtggc 30725917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 32337578 - 32337664
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    |||| ||| ||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  32337578 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 32337664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 363136 - 363095
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  363136 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 363095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 1215208 - 1215147
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||| ||||||| |||| |||||||| || ||||||||||||||||| ||| ||||| ||||    
T  1215208 aaaatttaatcacttaaaatttcgtccctatccccacttaatcactgccacgtcactaatta 1215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 3059348 - 3059389
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| |||||| |||||||||||||    
T  3059348 ttaatcatttaaaatttcgtccctctcctcacttaatcactg 3059389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 3299943 - 3299874
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    |||||||||| | ||||| ||| ||||| |||||| ||||||| ||||| ||| |||| |||||||||||    
T  3299943 agcttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcct 3299874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 5064696 - 5064619
Alignment:
Q  119 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  5064696 tgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcattt 5064619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 14196921 - 14196880
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||| | ||||||||||||||||||||    
T  14196921 ttaatcatttaaaatttcgcccctctccccacttaatcactg 14196880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 17734500 - 17734459
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  17734500 ttaatcatttaaaattttgtccctctccccacttaatcactg 17734459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 23292132 - 23292059
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    |||| ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  23292132 ttttggcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 23292059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 681066 - 680998
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| ||||||||  |   |||| ||||| |||| ||| |||||||||||||||||||||    
T  681066 attaatcatttaaaatttcgtccatgagcccagttaattactgccacgtcactgattagctgacgtggc 680998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 15819873 - 15819805
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  15819873 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 15819805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 16704692 - 16704624
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| ||| |||| |||||||||||    
T  16704692 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccttgaagttactaatcct 16704624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 20995039 - 20994975
Alignment:
Q  132 catttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  20995039 catttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 20994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 26463270 - 26463326
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 243  Q
    |||||||||||| |||||||| |||  |||| |||||||||| ||| ||||||||||    
T  26463270 ttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgatta 26463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 28498362 - 28498298
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgt 251  Q
    |||||||||||| |||| ||| ||   |||| |||||||||| ||| ||||||||||||||||||    
T  28498362 ttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 28498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 29810773 - 29810709
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgt 251  Q
    |||||||||||| |||| ||| ||   |||| |||||||||| ||| ||||||||||||||||||    
T  29810773 ttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 29810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 23455788 - 23455657
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||  | ||||||||||||||||    
T  23455788 gcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcattt 23455689  T
Q  197 aagatttcgtcactctccccacttaatcactg 228  Q
     | |||||||| |||| |||  ||||||||||    
T  23455688 caaatttcgtccctcttcccgattaatcactg 23455657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 23454955 - 23455070
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||  |||||    
T  23454955 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaaaaattacccattt 23455054  T
Q  197 aagatttcgtcactct 212  Q
    || ||| |||| ||||    
T  23455055 aaaattccgtccctct 23455070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 53477179 - 53477080
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  53477179 gcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 53477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 54591682 - 54591597
Alignment:
Q  92 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||| ||||||||| ||||||||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  54591682 ttttggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgccc 54591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 38982691 - 38982576
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 200  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||  | ||||||||| | |    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  201 tttcgtcactctcccc 216  Q
     |||||| ||||||||    
T  38982591 gttcgtccctctcccc 38982576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 38813555 - 38813635
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  38813555 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 38813635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 38814426 - 38814346
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  38814426 gcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgccc 38814346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 54590146 - 54590243
Alignment:
Q  99 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||| || ||||||||||  || ||| |||||||||||    
T  54590146 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcattt 54590243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 56556583 - 56556663
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  56556583 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 56556663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 56557436 - 56557344
Alignment:
Q  85 tattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    |||||| ||| |||||||||| || |||||||| |  ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  56557436 tattttttttaagcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 56557344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 13336937 - 13336863
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    ||||||||| ||||||||||| ||||| |||||| |||||||  |||||||||||||||||||||||||||||||    
T  13336937 gcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccatt 13336863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 48528558 - 48528628
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    |||| |||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  48528558 aaaatttaatcatttaaaatttcgttcctatccccacttaatcactgtcacatcactgattagctgacgtg 48528628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 52815664 - 52815744
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||    
T  52815664 gcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgccc 52815744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 52816522 - 52816442
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| |  |||||||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  52816522 gcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgccc 52816442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 16605692 - 16605760
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    ||||||||||||| |||||||| ||| |||||||||||||||| ||| ||||| |||||||||||||||    
T  16605692 attaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggc 16605760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 55013187 - 55013108
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || |||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||    
T  55013187 gcttaaatatgcttttcatccatgtaattataggctatttgatttttcat-cctgagcttactaatcctcccagtttgccc 55013108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 35028335 - 35028268
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  35028335 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggc 35028268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 22882422 - 22882352
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    ||||| ||||||||||| ||||| |||||| |||||||  ||||||||||||||||| |||||||||||||    
T  22882422 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 22934086 - 22934016
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    ||||| ||||||||||| ||||| |||||| |||||||  ||||||||||||||||| |||||||||||||    
T  22934086 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 9254411 - 9254476
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctc 166  Q
    ||||| ||||||||||| ||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9254411 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctc 9254476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 14801827 - 14801894
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  14801827 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 14801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 12691396 - 12691506
Alignment:
Q  86 attttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaa 185  Q
    |||||||| | ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | || || || |||     
T  12691396 attttattatggcttaaataggtctttcgtccatgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaat 12691495  T
Q  186 attaatcattt 196  Q
    |||||||||||    
T  12691496 attaatcattt 12691506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 54435433 - 54435347
Alignment:
Q  188 taatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatga 274  Q
    |||| |||||| |||||||| |||| ||| ||||||||||  ||||||||| |||||||||||| || ||||| |||||| ||||||    
T  54435433 taattatttaaaatttcgtccctcttcccccttaatcactaacacatcactaattagctgacgtcgcactgttaattggtcaaatga 54435347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 37976490 - 37976449
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  37976490 ttaatcatttaaaatttcgtcactctccccacttaatcactg 37976449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 50418974 - 50418929
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 232  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  50418974 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcac 50418929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 17356256 - 17356208
Alignment:
Q  190 atcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 17356208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 52298112 - 52298168
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  52298112 aaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 52298168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 15508010 - 15507943
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| | | ||||| ||| | |||||||||    
T  15508010 ttaatcatttaaaatttcgtctctctccccacttaatcactgccgcgtcactaatttgatgacgtggc 15507943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 34765717 - 34765666
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  34765717 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 34765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 48529918 - 48529855
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagc 245  Q
    |||| |||||||||||| |||| ||| ||||| |||||||||||||| ||| ||||||||||||    
T  48529918 aaaatttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcactgattagc 48529855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 4983033 - 4982991
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  4983033 attaatcatttaaaatttcgtccctctccccacttaatcactg 4982991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 16005929 - 16005975
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||||    
T  16005929 ttaatcatttaaaatttcgtccctctccctacttaatcactgtcaca 16005975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 22249927 - 22249993
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 163  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  22249927 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 22881172 - 22881242
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    ||||| ||||||||||| || || ||||||||||||||  ||||||| ||| | |||||||||||||||||    
T  22881172 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22881242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 22932836 - 22932906
Alignment:
Q  101 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    ||||| ||||||||||| || || ||||||||||||||  ||||||| ||| | |||||||||||||||||    
T  22932836 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 44967375 - 44967329
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 233  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  44967375 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 44967329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 53129836 - 53129778
Alignment:
Q  194 tttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 252  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||    
T  53129836 tttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 53129778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 53701903 - 53701969
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtgg 253  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||| ||||| ||| | ||||||||    
T  53701903 ttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 53701969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 9145072 - 9145031
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactg 9145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 13058128 - 13058169
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  13058128 ttaatcatttaaaatttcgtccctctccccacttaatcactg 13058169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 18831440 - 18831481
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  18831440 ttaatcatttaaaatttcgtctctctccccacttaatcactg 18831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 23613400 - 23613441
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  23613400 ttaatcatttaaaatttcgtccctctccccacttaatcactg 23613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 27934623 - 27934664
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatcactg 27934664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 32950233 - 32950274
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  32950233 ttaatcatttaaaatttcgtctctctccccacttaatcactg 32950274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 36009150 - 36009109
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36009150 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36009109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 37248327 - 37248368
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  37248327 ttaatcatttaaaatttcgtcgctctccccacttaatcactg 37248368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 42738337 - 42738296
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactg 42738296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 43155833 - 43155792
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  43155833 ttaatcatttaaaatttcgtccctctccccacttaatcactg 43155792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 49879513 - 49879472
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  49879513 ttaatcatttaaaatttcgtccctctccccacttaatcactg 49879472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 8287316 - 8287248
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  8287316 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcct 8287248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 10781822 - 10781770
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    ||||||||||||| |||||||| ||||||||| |||| ||||||||| |||||    
T  10781822 attaatcatttaaaatttcgtccctctccccagttaaccactgtcacgtcact 10781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 24349764 - 24349816
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 238  Q
    ||||||||||||| |||||||| ||||||||| |||||||||| ||| |||||    
T  24349764 attaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcact 24349816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 24711202 - 24711242
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcact 227  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  24711202 ttaatcatttaaaatttcgtccctctccccacttaatcact 24711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 32846362 - 32846462
Alignment:
Q  96 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 195  Q
    |||||||||| |  |||| | ||||||| |||||||||||||| ||||| | |||||| ||| ||||||| ||||||||||  |  ||| ||||||||||    
T  32846362 agcttaaataggtctttcgtgcttgcaaatataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatt 32846461  T
Q  196 t 196  Q
    |    
T  32846462 t 32846462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 53475832 - 53475900
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  ||||||| |||||| ||||| |||||||| ||||||||||| || |||||||||||    
T  53475832 gcttaaatatgtctttcatctttgcaaatatagaccatttgagttttcatccctaaagttactaatcct 53475900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 54087032 - 54086992
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcact 227  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  54087032 ttaatcatttaaaatttcgtctctctccccacttaatcact 54086992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 22250116 - 22250017
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | ||||| |  ||| |||||||||||    
T  22250116 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 22250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 53559770 - 53559671
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||| |  ||| |||||||||||    
T  53559770 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatcattt 53559671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 54961432 - 54961531
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  54961432 gcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 54961531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 5369038 - 5369079
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  5369038 ttaatcatttaaaattttgtccctctccccacttaatcactg 5369079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 9400825 - 9400784
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  9400825 ttaatcatttaaaatttcatccctctccccacttaatcactg 9400784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 22566890 - 22566931
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  22566890 ttaatcatttaaaatttcatccctctccccacttaatcactg 22566931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 33247579 - 33247538
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  33247579 ttaatcatttaaaatttcatccctctccccacttaatcactg 33247538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 34837380 - 34837339
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  34837380 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 34837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 35508577 - 35508536
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||  ||||||||||||||||||||    
T  35508577 ttaatcatttaaaatttcgtatctctccccacttaatcactg 35508536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 35731031 - 35730970
Alignment:
Q  110 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 171  Q
    |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| |||||    
T  35731031 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccatt 35730970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 38012261 - 38012302
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  38012261 ttaatcgtttaaaatttcgtctctctccccacttaatcactg 38012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 52909344 - 52909385
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  52909344 ttaatcatttaaaatttcgtccatctccccacttaatcactg 52909385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 55866333 - 55866386
Alignment:
Q  281 aaaagaccattatacctctgtgttca-tcttctcaaaatcttccctccttcact 333  Q
    |||||||||| |||||  |||||||| |||||| ||||||||||||||||||||    
T  55866333 aaaagaccatcatacccatgtgttcaatcttcttaaaatcttccctccttcact 55866386  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 19740861 - 19740929
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||||||||| |||| | ||||||| ||||| |||||||| |||||||||||    
T  19740861 gcttaaataggtctttcgtccttgcaaatatatgtcatttgaattttcgtccctgaagttactaatcct 19740929  T

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Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 33294526 - 33294458
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| ||||||| |||||| ||||| |||||||| |||||||||||    
T  33294526 gcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatcct 33294458  T

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Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 37677849 - 37677917
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 165  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  37677849 gcttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 37677917  T

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Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 51692644 - 51692688
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 231  Q
    ||||||| |||| |||||||| |||||||||||| ||||||||||    
T  51692644 ttaatcacttaaaatttcgtccctctccccacttgatcactgtca 51692688  T

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Target: scaffold1493 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 582 - 693
Alignment:
Q  86 attttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 184  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |  |||    
T  582 attttattttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaa 681  T
Q  185 aattaatcattt 196  Q
     |||||||||||    
T  682 tattaatcattt 693  T

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Target: scaffold0009 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 260990 - 261101
Alignment:
Q  85 tattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 184  Q
    ||||||||||  ||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |  |||    
T  260990 tattttatttaggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaa 261089  T
Q  185 aattaatcattt 196  Q
     |||||||||||    
T  261090 tattaatcattt 261101  T

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Target: scaffold0009; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 262540 - 262439
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |  ||| |||||||||||    
T  262540 gcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcattt 262441  T
Q  197 aa 198  Q
    ||    
T  262440 aa 262439  T

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Target: scaffold0182 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 14476 - 14400
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 173  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14476 gcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttt 14400  T

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Target: scaffold0182; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 13135 - 13215
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || || ||||| ||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  13135 gcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgccc 13215  T

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Target: scaffold0018 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 73110 - 73190
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 177  Q
    ||||||||| || |||||||| || |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  73110 gcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgccc 73190  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 239888 - 239821
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| ||   |||||||||| |||| |||||||||||||||||||||||||    
T  239888 ttaatcatttaaaatttcgtccctacacccacttaattactgccacatcactgattagctgacgtggc 239821  T

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Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 37900 - 37833
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 254  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  37900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 37833  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 69056 - 69120
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgt 251  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | ||||||    
T  69056 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgt 69120  T

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Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 23322 - 23401
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattgg 266  Q
    |||||||||||| |||| ||  ||| |||||||||||||||| ||| ||| | ||| ||||||||||||||||| |||||    
T  23322 ttaatcatttaaaatttggtttctccccccacttaatcactgccacgtcagtaatttgctgacgtggctctgttaattgg 23401  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 139762 - 139804
Alignment:
Q  186 attaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  139762 attaatcatttaaaatttcgtccctctccccacttaatcactg 139804  T

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Target: scaffold0559 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 1324 - 1365
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1365  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 14132 - 14060
Alignment:
Q  182 aaaaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtggc 254  Q
    |||| |||||||||||| |||| ||| ||| ||||||||||||| |||||| ||||| ||||||||||||||||    
T  14132 aaaatttaatcatttaaaatttggtccctc-ccccacttaatcattgtcacgtcactagattagctgacgtggc 14060  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 141900 - 141859
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatcactg 141859  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 1860 - 1901
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  1860 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1901  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 10326 - 10425
Alignment:
Q  97 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||||| |  |||| ||| ||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| |||||||||||    
T  10326 gcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 10425  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 2234 - 2275
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  2234 ttaatcatttaaaattttgtccctctccccacttaatcactg 2275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 21275 - 21234
Alignment:
Q  187 ttaatcatttaagatttcgtcactctccccacttaatcactg 228  Q
    |||||||||||| ||| |||| ||||||||||||||||||||    
T  21275 ttaatcatttaaaattccgtccctctccccacttaatcactg 21234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 14241 - 14177
Alignment:
Q  132 catttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 196  Q
    ||||||| |||||||| ||||| ||||||||||| ||| | ||||| || ||| |||||||||||    
T  14241 catttgaattttcatcactgaagttactaatccttccaatctgcccctacaaatattaatcattt 14177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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