View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17182_low_4 (Length: 445)

Name: NF17182_low_4
Description: NF17182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17182_low_4
NF17182_low_4
[»] chr8 (47 HSPs)
chr8 (19-432)||(35151605-35152056)
chr8 (176-324)||(1977181-1977329)
chr8 (171-321)||(17499244-17499394)
chr8 (175-325)||(16983417-16983567)
chr8 (175-310)||(32072120-32072255)
chr8 (175-325)||(24055932-24056082)
chr8 (200-307)||(17741552-17741659)
chr8 (190-325)||(34861199-34861329)
chr8 (195-325)||(5979923-5980052)
chr8 (187-310)||(8914806-8914929)
chr8 (199-314)||(9952775-9952890)
chr8 (199-318)||(28413884-28414002)
chr8 (175-325)||(36804846-36804996)
chr8 (200-285)||(8903900-8903985)
chr8 (177-325)||(13407330-13407479)
chr8 (199-315)||(13214542-13214658)
chr8 (175-318)||(11962696-11962838)
chr8 (213-315)||(34952504-34952606)
chr8 (179-325)||(4674937-4675079)
chr8 (185-270)||(17716884-17716969)
chr8 (197-325)||(9193427-9193555)
chr8 (163-325)||(6098784-6098944)
chr8 (176-318)||(7493356-7493503)
chr8 (177-318)||(23685156-23685293)
chr8 (187-316)||(6387596-6387726)
chr8 (163-277)||(9192012-9192126)
chr8 (187-325)||(17915851-17915985)
chr8 (190-318)||(35689518-35689647)
chr8 (199-304)||(43506582-43506687)
chr8 (176-310)||(36629683-36629816)
chr8 (195-285)||(35797438-35797528)
chr8 (177-327)||(45246459-45246609)
chr8 (218-287)||(35819198-35819267)
chr8 (190-270)||(1961320-1961400)
chr8 (243-310)||(14236429-14236496)
chr8 (190-285)||(31301153-31301247)
chr8 (193-315)||(4319750-4319872)
chr8 (176-310)||(41727454-41727588)
chr8 (190-255)||(10868029-10868094)
chr8 (266-318)||(8671063-8671115)
chr8 (266-317)||(5727346-5727397)
chr8 (195-261)||(1423789-1423855)
chr8 (176-222)||(7599532-7599578)
chr8 (175-221)||(13856506-13856552)
chr8 (181-235)||(37489431-37489485)
chr8 (211-315)||(25915088-25915195)
chr8 (175-310)||(45524897-45525033)
[»] chr3 (52 HSPs)
chr3 (175-325)||(20493452-20493602)
chr3 (204-325)||(52123963-52124084)
chr3 (163-321)||(18427161-18427321)
chr3 (175-325)||(28529276-28529424)
chr3 (195-325)||(41451902-41452032)
chr3 (195-325)||(24734748-24734878)
chr3 (190-325)||(37776710-37776845)
chr3 (177-318)||(20791321-20791462)
chr3 (175-325)||(5452069-5452217)
chr3 (177-325)||(14236044-14236192)
chr3 (175-283)||(26310495-26310603)
chr3 (172-318)||(29588747-29588895)
chr3 (190-310)||(46450103-46450224)
chr3 (191-317)||(50156675-50156801)
chr3 (198-315)||(8824996-8825113)
chr3 (186-287)||(19345045-19345146)
chr3 (176-325)||(27243069-27243219)
chr3 (179-279)||(22604587-22604687)
chr3 (190-318)||(46160985-46161113)
chr3 (195-310)||(55452037-55452152)
chr3 (175-325)||(15790377-15790526)
chr3 (176-318)||(48351460-48351602)
chr3 (175-324)||(29755523-29755672)
chr3 (200-315)||(2419481-2419596)
chr3 (232-307)||(24429050-24429125)
chr3 (197-318)||(44844026-44844148)
chr3 (190-310)||(41387599-41387719)
chr3 (213-320)||(38414708-38414815)
chr3 (200-287)||(41607459-41607546)
chr3 (190-310)||(138801-138921)
chr3 (243-315)||(29388611-29388683)
chr3 (243-304)||(10948588-10948649)
chr3 (247-304)||(37285378-37285435)
chr3 (178-315)||(41707457-41707593)
chr3 (176-287)||(50661566-50661678)
chr3 (195-318)||(2009038-2009160)
chr3 (187-325)||(24748916-24749055)
chr3 (175-321)||(46575971-46576118)
chr3 (246-284)||(22856282-22856320)
chr3 (247-318)||(30355142-30355215)
chr3 (247-285)||(49072100-49072138)
chr3 (195-285)||(13809124-13809215)
chr3 (178-221)||(24748933-24748976)
chr3 (195-226)||(46237152-46237183)
chr3 (279-325)||(27243054-27243100)
chr3 (176-222)||(55283167-55283213)
chr3 (176-269)||(7419241-7419334)
chr3 (200-237)||(18722535-18722572)
chr3 (250-327)||(38138587-38138664)
chr3 (233-285)||(742037-742089)
chr3 (247-327)||(39186059-39186139)
chr3 (175-215)||(46156741-46156781)
[»] chr6 (32 HSPs)
chr6 (175-325)||(34905359-34905509)
chr6 (175-327)||(10133163-10133315)
chr6 (186-325)||(16851980-16852119)
chr6 (175-310)||(32122818-32122953)
chr6 (187-325)||(5106333-5106471)
chr6 (177-318)||(21987317-21987458)
chr6 (183-310)||(2675926-2676053)
chr6 (176-310)||(31116146-31116280)
chr6 (199-324)||(32112725-32112850)
chr6 (190-310)||(445856-445976)
chr6 (199-325)||(1392675-1392800)
chr6 (175-325)||(31443982-31444132)
chr6 (190-321)||(17144682-17144813)
chr6 (233-315)||(8441866-8441948)
chr6 (233-315)||(8450670-8450752)
chr6 (194-319)||(12780772-12780897)
chr6 (176-325)||(12753767-12753916)
chr6 (243-325)||(16187441-16187521)
chr6 (243-325)||(16187659-16187739)
chr6 (176-325)||(10060883-10061033)
chr6 (195-325)||(19090221-19090352)
chr6 (195-318)||(32598962-32599085)
chr6 (199-285)||(12784986-12785072)
chr6 (202-287)||(899943-900028)
chr6 (200-251)||(2931609-2931660)
chr6 (171-221)||(373513-373563)
chr6 (172-238)||(12327299-12327365)
chr6 (176-285)||(12690276-12690386)
chr6 (195-285)||(16436108-16436197)
chr6 (195-261)||(35128794-35128860)
chr6 (190-231)||(6531399-6531440)
chr6 (175-220)||(12488156-12488201)
[»] chr4 (54 HSPs)
chr4 (175-325)||(8108979-8109129)
chr4 (176-317)||(50164419-50164560)
chr4 (195-318)||(43771169-43771292)
chr4 (199-325)||(24834625-24834751)
chr4 (179-325)||(39471184-39471330)
chr4 (175-317)||(722180-722322)
chr4 (195-325)||(26361315-26361445)
chr4 (189-317)||(24938430-24938558)
chr4 (195-310)||(33653511-33653626)
chr4 (187-317)||(754595-754725)
chr4 (175-318)||(47009212-47009355)
chr4 (175-318)||(20454563-20454704)
chr4 (190-298)||(46287479-46287587)
chr4 (190-325)||(34129407-34129542)
chr4 (182-304)||(5044568-5044690)
chr4 (175-285)||(50481592-50481702)
chr4 (178-315)||(48339357-48339494)
chr4 (202-318)||(45310962-45311078)
chr4 (194-317)||(22542423-22542546)
chr4 (200-287)||(31250928-31251015)
chr4 (176-325)||(49242194-49242343)
chr4 (176-315)||(45081759-45081898)
chr4 (195-285)||(10169692-10169782)
chr4 (176-325)||(39016687-39016837)
chr4 (175-285)||(49077272-49077382)
chr4 (254-315)||(40991606-40991667)
chr4 (187-318)||(37451027-37451156)
chr4 (194-317)||(38537528-38537654)
chr4 (175-270)||(50571887-50571982)
chr4 (176-286)||(49769850-49769960)
chr4 (190-285)||(20225388-20225483)
chr4 (188-318)||(25719126-25719257)
chr4 (198-276)||(46242000-46242078)
chr4 (199-317)||(52671877-52671995)
chr4 (200-285)||(4138913-4138998)
chr4 (179-291)||(41153239-41153351)
chr4 (247-325)||(5545673-5545752)
chr4 (195-325)||(19447174-19447305)
chr4 (199-289)||(49682834-49682924)
chr4 (172-221)||(16178697-16178746)
chr4 (203-324)||(19937180-19937301)
chr4 (190-318)||(30866945-30867074)
chr4 (265-318)||(37050642-37050695)
chr4 (181-325)||(44832492-44832637)
chr4 (177-229)||(21776948-21777000)
chr4 (190-314)||(29699527-29699650)
chr4 (187-262)||(2088735-2088810)
chr4 (175-226)||(6212734-6212785)
chr4 (190-285)||(38636375-38636470)
chr4 (240-315)||(52279276-52279351)
chr4 (198-292)||(50652376-50652470)
chr4 (249-325)||(11895134-11895211)
chr4 (190-259)||(42862494-42862563)
chr4 (253-325)||(19933483-19933555)
[»] chr7 (57 HSPs)
chr7 (175-317)||(6442188-6442330)
chr7 (175-325)||(22189962-22190112)
chr7 (176-325)||(27949297-27949446)
chr7 (190-325)||(11824109-11824242)
chr7 (178-325)||(27888308-27888455)
chr7 (190-325)||(46517329-46517464)
chr7 (195-325)||(11692222-11692352)
chr7 (199-325)||(25686842-25686968)
chr7 (187-285)||(31502511-31502609)
chr7 (195-317)||(32205119-32205241)
chr7 (190-325)||(33008142-33008274)
chr7 (175-318)||(7775023-7775165)
chr7 (195-310)||(12263458-12263573)
chr7 (214-325)||(6580009-6580120)
chr7 (199-321)||(14795178-14795300)
chr7 (199-321)||(15242170-15242292)
chr7 (197-325)||(32212877-32213004)
chr7 (195-289)||(25092704-25092798)
chr7 (243-325)||(44350809-44350891)
chr7 (243-318)||(27320465-27320540)
chr7 (175-278)||(32605355-32605457)
chr7 (175-316)||(19422850-19422991)
chr7 (177-325)||(24539129-24539278)
chr7 (190-318)||(39254121-39254249)
chr7 (195-285)||(36845569-36845658)
chr7 (247-325)||(48374446-48374524)
chr7 (177-325)||(17749719-17749868)
chr7 (244-314)||(7459435-7459505)
chr7 (178-325)||(25428485-25428633)
chr7 (178-261)||(17354598-17354681)
chr7 (195-262)||(19494409-19494476)
chr7 (162-325)||(19840891-19841057)
chr7 (190-313)||(32178823-32178945)
chr7 (199-325)||(45909503-45909630)
chr7 (247-325)||(46994369-46994448)
chr7 (260-310)||(12167315-12167365)
chr7 (200-325)||(13919828-13919954)
chr7 (183-225)||(45206042-45206084)
chr7 (176-225)||(42274656-42274705)
chr7 (190-325)||(26703446-26703582)
chr7 (185-225)||(28713049-28713089)
chr7 (195-262)||(12271029-12271095)
chr7 (251-317)||(7774944-7775009)
chr7 (175-225)||(44511043-44511093)
chr7 (272-317)||(2911882-2911927)
chr7 (197-318)||(10933979-10934100)
chr7 (272-325)||(20954800-20954853)
chr7 (190-231)||(31874069-31874110)
chr7 (253-310)||(31874117-31874174)
chr7 (272-325)||(38065333-38065386)
chr7 (243-287)||(3855855-3855899)
chr7 (175-223)||(4090086-4090134)
chr7 (190-226)||(8073394-8073430)
chr7 (176-260)||(9111406-9111490)
chr7 (257-325)||(30742547-30742615)
chr7 (257-325)||(36845498-36845566)
chr7 (182-222)||(41508385-41508425)
[»] chr5 (36 HSPs)
chr5 (161-325)||(41105577-41105741)
chr5 (195-325)||(5413741-5413874)
chr5 (199-325)||(28490729-28490855)
chr5 (185-318)||(34384705-34384838)
chr5 (185-325)||(28223783-28223923)
chr5 (177-323)||(30325883-30326029)
chr5 (175-327)||(36337892-36338047)
chr5 (190-310)||(10141998-10142118)
chr5 (162-310)||(25710494-25710642)
chr5 (163-304)||(28434846-28434985)
chr5 (187-325)||(34368395-34368533)
chr5 (195-321)||(41330404-41330530)
chr5 (195-325)||(37455392-37455525)
chr5 (207-318)||(25919266-25919377)
chr5 (175-285)||(10950109-10950219)
chr5 (175-292)||(25630830-25630947)
chr5 (177-327)||(27592457-27592607)
chr5 (200-286)||(31885877-31885963)
chr5 (180-325)||(4714777-4714922)
chr5 (201-285)||(39246657-39246741)
chr5 (175-310)||(17537124-17537259)
chr5 (213-305)||(14553573-14553665)
chr5 (198-325)||(17434857-17434983)
chr5 (247-325)||(28611785-28611863)
chr5 (190-263)||(28155769-28155842)
chr5 (190-310)||(28090251-28090371)
chr5 (195-261)||(13456236-13456302)
chr5 (204-278)||(34480005-34480079)
chr5 (172-260)||(24990906-24990994)
chr5 (246-289)||(4427336-4427379)
chr5 (272-318)||(2935449-2935495)
chr5 (279-325)||(4959287-4959333)
chr5 (175-225)||(43541874-43541924)
chr5 (247-323)||(25002014-25002091)
chr5 (172-260)||(24915075-24915163)
chr5 (190-325)||(42224597-42224733)
[»] chr1 (56 HSPs)
chr1 (166-310)||(29673489-29673633)
chr1 (190-310)||(41958121-41958241)
chr1 (200-314)||(33193098-33193212)
chr1 (177-318)||(19101615-19101756)
chr1 (199-325)||(8741230-8741356)
chr1 (175-325)||(26980269-26980419)
chr1 (176-318)||(41948160-41948302)
chr1 (176-310)||(44271942-44272076)
chr1 (195-325)||(28218053-28218185)
chr1 (172-325)||(32211791-32211944)
chr1 (198-325)||(6133632-6133758)
chr1 (187-318)||(8899049-8899180)
chr1 (199-317)||(10659784-10659901)
chr1 (175-325)||(11987649-11987799)
chr1 (195-325)||(30678918-30679048)
chr1 (195-324)||(2225267-2225396)
chr1 (175-283)||(49730887-49730995)
chr1 (188-318)||(15468256-15468386)
chr1 (197-307)||(31866361-31866470)
chr1 (176-324)||(25543364-25543511)
chr1 (177-318)||(15523235-15523372)
chr1 (177-318)||(15531229-15531366)
chr1 (177-318)||(22540393-22540530)
chr1 (211-316)||(33114030-33114135)
chr1 (195-310)||(931417-931532)
chr1 (195-325)||(15928598-15928726)
chr1 (171-287)||(50539141-50539259)
chr1 (185-318)||(36566929-36567056)
chr1 (200-308)||(45179270-45179378)
chr1 (199-303)||(51732324-51732428)
chr1 (247-318)||(12767342-12767413)
chr1 (190-261)||(41918033-41918104)
chr1 (176-318)||(27570249-27570391)
chr1 (256-310)||(29673678-29673732)
chr1 (176-325)||(32848589-32848739)
chr1 (177-325)||(13114676-13114825)
chr1 (187-300)||(31074751-31074863)
chr1 (178-325)||(11430467-11430614)
chr1 (190-325)||(41095615-41095751)
chr1 (176-318)||(37552965-37553105)
chr1 (175-217)||(39039470-39039512)
chr1 (180-325)||(13388343-13388491)
chr1 (185-318)||(33059907-33060039)
chr1 (243-287)||(3872679-3872723)
chr1 (190-325)||(11135777-11135913)
chr1 (190-229)||(9165340-9165379)
chr1 (271-318)||(21466634-21466681)
chr1 (190-324)||(28109906-28110040)
chr1 (266-325)||(39974207-39974266)
chr1 (199-310)||(35336911-35337018)
chr1 (195-285)||(37525572-37525662)
chr1 (175-220)||(27464656-27464701)
chr1 (197-278)||(46335142-46335223)
chr1 (175-216)||(46792996-46793037)
chr1 (279-323)||(18157049-18157093)
chr1 (200-292)||(39499442-39499534)
[»] chr2 (47 HSPs)
chr2 (190-317)||(26767776-26767903)
chr2 (175-325)||(12989214-12989364)
chr2 (175-325)||(6980127-6980277)
chr2 (187-325)||(9470116-9470253)
chr2 (175-325)||(45554590-45554732)
chr2 (175-318)||(38464186-38464329)
chr2 (195-318)||(30718341-30718463)
chr2 (177-318)||(15884458-15884595)
chr2 (178-325)||(44274260-44274407)
chr2 (190-285)||(18511256-18511351)
chr2 (176-321)||(10981542-10981687)
chr2 (175-307)||(36471863-36471995)
chr2 (175-314)||(37652263-37652402)
chr2 (176-318)||(11539447-11539592)
chr2 (195-324)||(35316409-35316538)
chr2 (175-299)||(16719463-16719587)
chr2 (247-325)||(25238284-25238362)
chr2 (175-310)||(3804607-3804743)
chr2 (176-262)||(15508938-15509024)
chr2 (176-310)||(33678138-33678271)
chr2 (199-285)||(34142186-34142272)
chr2 (194-288)||(45270600-45270694)
chr2 (220-285)||(7919317-7919382)
chr2 (190-287)||(17188103-17188200)
chr2 (190-325)||(32856142-32856277)
chr2 (190-263)||(2476572-2476645)
chr2 (245-318)||(14489553-14489626)
chr2 (191-282)||(43414394-43414485)
chr2 (247-325)||(4552847-4552925)
chr2 (250-296)||(14489676-14489722)
chr2 (178-304)||(24497218-24497344)
chr2 (172-317)||(472178-472323)
chr2 (190-318)||(4964686-4964815)
chr2 (185-226)||(41805882-41805923)
chr2 (195-318)||(24895280-24895404)
chr2 (176-292)||(25730479-25730595)
chr2 (190-325)||(28898043-28898179)
chr2 (178-221)||(37719860-37719903)
chr2 (190-261)||(42182927-42182998)
chr2 (243-285)||(19639184-19639226)
chr2 (243-285)||(19837777-19837819)
chr2 (179-221)||(28898061-28898103)
chr2 (172-218)||(42579771-42579817)
chr2 (266-307)||(80403-80444)
chr2 (175-220)||(11729715-11729760)
chr2 (178-310)||(31395466-31395599)
chr2 (199-299)||(30849284-30849384)
[»] scaffold0018 (1 HSPs)
scaffold0018 (185-325)||(27845-27985)
[»] scaffold0543 (1 HSPs)
scaffold0543 (163-285)||(9675-9797)
[»] scaffold0492 (1 HSPs)
scaffold0492 (163-285)||(11221-11343)
[»] scaffold0204 (1 HSPs)
scaffold0204 (178-315)||(26879-27016)
[»] scaffold0016 (1 HSPs)
scaffold0016 (244-325)||(204715-204796)
[»] scaffold0194 (2 HSPs)
scaffold0194 (249-325)||(8418-8494)
scaffold0194 (185-225)||(8522-8562)
[»] scaffold0886 (1 HSPs)
scaffold0886 (247-304)||(3340-3397)
[»] scaffold0176 (1 HSPs)
scaffold0176 (177-226)||(14972-15021)


Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 19 - 432
Target Start/End: Complemental strand, 35152056 - 35151605
Alignment:
Q  19 gataagcctataatacaatcactgatcactaataattagcagcaataagcaaagtgttataaaagacaagttgaatttcggaattttacaaggattgtga 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35152056 gataaacctataatacaatcactgatcactaataattagcagcaataagcaaagtgttataaaagacaagttgaatttcggaattttacaaggattgtga 35151957  T
Q  119 ccacctttaaagtttagaaaacactaacaaagatgtttatagatgaggaatattagcaacact--ctttttaacac------------ttactcttttat 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||            ||||||||||||    
T  35151956 ccacctttaaagtttagaaaacactaacaaagatgtttatagatgaggaatactagcaacactcactttttaacactctttttagcatttactcttttat 35151857  T
Q  205 tggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagag 304  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| ||||||  ||||| | ||    
T  35151856 tggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgtagacccacaataattcaaactaataagaaagtgaatattaaatag 35151757  T
Q  305 agtgttcaaaagagtgtgttg-------------attatccactaa-----------cgagaattgaattcagactcttatggaaacactaaatttgacc 380  Q
    |||||||||||||| ||||||             |||||||| |||           ||| ||||||||||||||||||||||| |||||||||||||||    
T  35151756 agtgttcaaaagagagtgttgctagcatttataaattatccagtaaagagtttataacgataattgaattcagactcttatggatacactaaatttgacc 35151657  T
Q  381 atttattattgtacgtgtatatatcattatcaaggctctatagatgatgtcc 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35151656 atttattattgtacgtgtatatatcattatcaaggctctatagatgatgtcc 35151605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 1977329 - 1977181
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | || |||| |||||| | ||||||||||||||||||||||| || | |||||| || |||||||||||||||||||| ||||||| ||||    
T  1977329 aacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatccacaatgattt 1977230  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgtt 324  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  1977229 aaaccaataaaagagtgagtattagagagtgtgttcaaaagagtgtgtt 1977181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 171 - 321
Target Start/End: Complemental strand, 17499394 - 17499244
Alignment:
Q  171 ttagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 270  Q
    ||||||||||||| | || ||||   |||||||||||||||||||||| ||||||| || ||||||||  | |||||||||||||||||||| |||||||    
T  17499394 ttagcaacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaat 17499295  T
Q  271 tatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 321  Q
     |||||||||||||| | |||| ||||||||||||||  ||||||||||||    
T  17499294 gatttaaaccaataagagagtgagtattagagagagttgtcaaaagagtgt 17499244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 16983417 - 16983567
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| |||  |||||||||| |||||| | ||||||| |  | ||||||||| ||||||||||||||||||||| |||||| |||    
T  16983417 caacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaattttcaaagtgtagactcacaatgatt 16983516  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| | |||| ||||||||||||||||||||||||| ||||||    
T  16983517 taaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 16983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 310
Target Start/End: Original strand, 32072120 - 32072255
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| |||||||||||||||||||| ||||||||||| || | |||||| || ||||||||| ||||||||||||||||||||||    
T  32072120 caacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaattatt 32072219  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    |||| |||||| | | || | |||||||||||||||    
T  32072220 taaatcaataagagaatgggcattagagagagtgtt 32072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 24056082 - 24055932
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    |||| |||| |||| ||||  |||||||||  |||||||| ||||||||||| || | ||||||    ||||||||||||||||||||||||||||||||    
T  24056082 caacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgtagacccacaattatt 24055983  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| | |||| || ||||||| |||||||||||||| ||||||    
T  24055982 taaaccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 17741659 - 17741552
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 299  Q
    ||||||||||||||||||||||||||| || |||||||| |  |||||||||||||||||||||| | |||  |||||||||||||| || || ||||||    
T  17741659 tttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaagaaatgagtatta 17741560  T
Q  300 gagagagt 307  Q
    ||||||||    
T  17741559 gagagagt 17741552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 34861329 - 34861199
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||||||||||||||||||||||||||||||| || | ||||||  | |||||||||||||||     |||||||| |||||||||||||| | |    
T  34861329 cactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagt-----cccacaataatttaaaccaataagaga 34861235  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||| ||||||| ||| ||||||||||||| ||||||    
T  34861234 gtgagtattagggagggtgttcaaaagagagtgttg 34861199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 5979923 - 5980052
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||| |||||||||| |||||||||||||| || | |||||| || |||||||||||||||||  || ||||||  ||| ||||||||| | |||| |    
T  5979923 actcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtgaactcacaatggttt-aaccaataagagagtgag 5980021  T
Q  295 tattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||||||||||| ||||||    
T  5980022 tattagagagagtgttcaaaagagagtgttg 5980052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 187 - 310
Target Start/End: Original strand, 8914806 - 8914929
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||||| ||||||| ||||||| ||| |||||||||||| || | |||||| || |||| ||||||||||||||||||||||| ||||||||||||||     
T  8914806 taacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataag 8914905  T
Q  287 aaagtgtgtattagagagagtgtt 310  Q
    | |||| ||   ||||||||||||    
T  8914906 agagtgggtgacagagagagtgtt 8914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 199 - 314
Target Start/End: Complemental strand, 9952890 - 9952775
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    ||||||||||||||||||||| |||||| || | |||||| |  |||||||||||||||||| ||||||||| |||||||||||||| | | || |||||    
T  9952890 ttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgatttaaaccaataagataatgagtatt 9952791  T
Q  299 agagagagtgttcaaa 314  Q
      ||||||||||||||    
T  9952790 taagagagtgttcaaa 9952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 28414002 - 28413884
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    ||||||| |||||||||||||||||||| || | |||||| |  ||||||||||||||| |||||||| ||| |||||||||||||||| | || |||||    
T  28414002 ttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtatagacccataatgatttaaaccaataaaagaatgagtatt 28413903  T
Q  299 agagagagtgttcaaaagag 318  Q
    || | |||||||||||||||    
T  28413902 ag-gcgagtgttcaaaagag 28413884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 36804996 - 36804846
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | ||| ||| ||| | |||||||||| ||||||||||||||| || |||||||| || ||||||||||||| | || | ||||||| |||    
T  36804996 caacactctctctaatactaactatattattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatt 36804897  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| |||||| | |||  |||||||||||| |||| ||||||| ||||||    
T  36804896 taaatcaataagagagtaagtattagagagaatgttgaaaagagagtgttg 36804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 8903900 - 8903985
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||| |||||||||||||||||||| || | ||||||  | |||||||||||||||||||||||||||| ||||||||||||||    
T  8903900 tttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgtagacccacaatgatttaaaccaataa 8903985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 177 - 325
Target Start/End: Complemental strand, 13407479 - 13407330
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 275  Q
    ||||||| | ||||||| ||| ||||||||||| |||||||||||||||| || |||||  | || ||| |||||||||||||| |||||||| | ||||    
T  13407479 acactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgattt 13407380  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    || ||||| | | | || || |||||||||||||||||||||| ||||||    
T  13407379 aacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttg 13407330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 13214542 - 13214658
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||| ||| ||||||||||| |  ||||||||  ||||||||||||||||||||||||||||||  | ||||| ||||| | || | |||||    
T  13214542 ttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtatt 13214641  T
Q  299 agagagagtgttcaaaa 315  Q
    || ||||||||||||||    
T  13214642 agggagagtgttcaaaa 13214658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 11962838 - 11962696
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    |||||| || ||||| ||| |||||||||||| || ||||||| |||| ||| || ||||| ||  | |||||||||||||||||||| ||| ||| |||    
T  11962838 caacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgtagatcca-aatgatt 11962740  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||||||||||||| | ||||||   ||||||||||||||||    
T  11962739 taaaccaataaaaaagcgagtattaacaagagtgttcaaaagag 11962696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 34952504 - 34952606
Alignment:
Q  213 atcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttca 312  Q
    |||||||||||||| || ||||||||||  ||||||||||||  ||||||||| |||| ||||||||||| | |||| |  |||||||||||||||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgttca 34952603  T
Q  313 aaa 315  Q
    |||    
T  34952604 aaa 34952606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 4674937 - 4675079
Alignment:
Q  179 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 278  Q
    ||||| ||||| ||| ||||||||||| ||||||||||||||    ||||  | |||||| |  || |||||||||||||||| | |||||| |||||||    
T  4674937 actctctttaaaactcactcttttattagatgaaatcaatgt----cctatcactttgtgtgagtttaattttcaaagtgtagtcacacaatgatttaaa 4675032  T
Q  279 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| ||  ||||||| ||||||||||||| || ||||||    
T  4675033 ccaataaaaaaatgaatattagaaagagtgttcaaaatagagtgttg 4675079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 17716884 - 17716969
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 270  Q
    ||||||||| ||  |||||||||||||||||||| ||||||| |||||||| || || || |||||||||||||||||||||||||    
T  17716884 tttaacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgtagacccacaat 17716969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 9193427 - 9193555
Alignment:
Q  197 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 296  Q
    ||||||||| |||||||| | ||||||||  |||| ||||||    |||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||    
T  9193427 tcttttatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataaaaaaatgtgta 9193526  T
Q  297 ttagagagagtgttcaaaagagtgtgttg 325  Q
    |||  ||  |||| |||||||| ||||||    
T  9193527 ttaatgatcgtgtacaaaagagagtgttg 9193555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 325
Target Start/End: Complemental strand, 6098944 - 6098784
Alignment:
Q  163 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    ||||||| |||| |||||||| | ||||||| ||  |||||| ||||||||| |  |||| ||| || | ||||||    ||||||||||||||||||||    
T  6098944 gaggaatgttagtaacactctctctaacactcacatttttataggatgaaatta--gtatatcccaccactttgtgcatgttcaattttcaaagtgtaga 6098847  T
Q  263 cccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
     ||||||| ||||||| |||||| | |||| |||||||||||| |||| ||||||| ||||||    
T  6098846 tccacaataatttaaatcaataagagagtgagtattagagagaatgtttaaaagagagtgttg 6098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 318
Target Start/End: Complemental strand, 7493503 - 7493356
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaa----tgtatgtcctactattttgtgg-ggattcaattttcaaagtgtagacccacaat 270  Q
    |||||||| | ||||||||| | ||||||||||||||||||     ||| |||| ||| | ||||||  || ||| ||||||||||||||||| ||||||    
T  7493503 aacactctctctaacacttatttttttattggatgaaatcatatattgtgtgtcttaccactttgtgttgggttctattttcaaagtgtagactcacaat 7493404  T
Q  271 tatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
     |||||||||||||| | |||| |||||||| |||||||||| |||||    
T  7493403 gatttaaaccaataagagagtgagtattagaaagagtgttcataagag 7493356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 23685156 - 23685293
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| || | |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||| |||||||||||  | |||| |||||    
T  23685156 acactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcgcaatgattta 23685255  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||||||    ||  |||||||||||||||||||||||||    
T  23685256 aaccaataa----gttagtattagagagagtgttcaaaagag 23685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 316
Target Start/End: Original strand, 6387596 - 6387726
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataa 285  Q
    ||||||| ||||||||||||||| |||||||||||||||| || ||||| || || ||| |||| |||||| || |||||||| |  ||||| |||||||    
T  6387596 taacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatacgacccacattgttttaacccaataa 6387695  T
Q  286 aaaagtgtgtattagagagagtgttcaaaag 316  Q
     | | || || ||||||||||||| ||||||    
T  6387696 gagaatgagtgttagagagagtgtccaaaag 6387726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 9192012 - 9192126
Alignment:
Q  163 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    |||||||  |||||||||||  ||||| ||||||||||| || |||| |||||||||||| ||| || | |||||| || ||||||||| ||| ||||||    
T  9192012 gaggaatgctagcaacactcactttaatacttactctttcatcggataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtaga 9192111  T
Q  263 cccacaattatttaa 277  Q
    | |||||| ||||||    
T  9192112 ctcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 17915851 - 17915985
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||||||||||||||||| ||| |||  || | ||||||||| ||||||||  | || ||||||||||||    ||  ||||| |||||||| |||||     
T  17915851 taacacttactcttttattagataaaaataacgaatgtcctaccattttgtgttggtttaattttcaaagt----acttacaatgatttaaactaataat 17915946  T
Q  287 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||| ||||||||||||||||| |||| || ||||||    
T  17915947 aaagtgagtattagagagagtgtttaaaaaagagtgttg 17915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 35689518 - 35689647
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt-agacccacaattatttaaaccaataaaaa 288  Q
    |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| ||||||||||||| || |||||| |  ||| | ||||||||||    
T  35689518 cactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaagtcccacattgttttcacccaataaaaa 35689617  T
Q  289 agtgtgtattagagagagtgttcaaaagag 318  Q
    |||| ||  ||||||||||| |||||||||    
T  35689618 agtgagtgctagagagagtgctcaaaagag 35689647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 43506582 - 43506687
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||  ||||||||||||| | || | |||||| || ||| | |||||| ||||||||||||||| |||||| ||||||| | |||| |||||    
T  43506582 ttttattggatataatcaatgtatgttccaccactttgtgtgggttctactttcaatgtgtagacccacaatgatttaagccaataagagagtgagtatt 43506681  T
Q  299 agagag 304  Q
    ||||||    
T  43506682 agagag 43506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 36629683 - 36629816
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||| | |||| |||||||||||||||| |||||||| |||||||||  ||  | | ||||||  ||| |||| ||| |||||||||| |||| || |    
T  36629683 aacactatctttagcacttactcttttattagatgaaataaatgtatgtattatcactgtgtggg--ttctatttccaatgtgtagacccgcaatgatct 36629780  T
Q  276 aaaccaat-aaaaaagtgtgtattagagagagtgtt 310  Q
    |||||||| |||||| || |||||||||||||||||    
T  36629781 aaaccaataaaaaaaatgagtattagagagagtgtt 36629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 35797438 - 35797528
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||||||||||| |||||||||||||| | || | |||||| |  ||||||||| |||||||| | ||||||| ||||||| ||||||    
T  35797438 actcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaataa 35797528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 327
Target Start/End: Original strand, 45246459 - 45246609
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| ||||||||||| |||||||||||||||  || | ||| || |  ||| |||| ||||||||||| |  |||| |||||    
T  45246459 acactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgattta 45246558  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 327  Q
    || |||||| | || | ||||  |||||||| |||||||||| ||||||||    
T  45246559 aatcaataagagagggggtataggagagagtattcaaaagagagtgttgat 45246609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 35819198 - 35819267
Alignment:
Q  218 tgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    ||||||||| || |||||||| ||  |||||||||||||| |||||||||||| |||||||| |||||||    
T  35819198 tgtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataaaa 35819267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 1961320 - 1961400
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 270  Q
    |||||| ||||||||||||| ||||||| ||| |||| || | |||| | || |||||||||||||||||||||| |||||    
T  1961320 cacttaatcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtagaccaacaat 1961400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 14236429 - 14236496
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||||| ||||||||| | |||||| ||||||||||| || | |||| |||||||||||||||||    
T  14236429 ttcaattttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagtattagagagagtgtt 14236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 31301153 - 31301247
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||| |||||||||||||||||||||||||||||| | || | |||||| |  ||| |||||||| |||||||  || ||| ||||||||||||||    
T  31301153 cactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtaga-tcataataatttaaaccaataa 31301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 4319872 - 4319750
Alignment:
Q  193 ttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtg 292  Q
    ||||| ||||||| ||| ||||||||| |||||  |  | |||||| | ||| ||||||||||||||||||| ||| | ||||||| |||||||||| ||    
T  4319872 ttacttttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaagtgtagacctacactaatttaaatcaataaaaaaatg 4319773  T
Q  293 tgtattagagagagtgttcaaaa 315  Q
      | ||||||||| |||| ||||    
T  4319772 aatgttagagagaatgttaaaaa 4319750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 41727454 - 41727588
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| |||| || | |||||||| || ||| |||||||||||||||| ||   ||||||  | |||  |||| || |||||||| || ||| ||||    
T  41727454 aacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgtagactcataatgattt 41727553  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||| || | |||| |||||||||||||||||    
T  41727554 aaaccaacaagagagtgagtattagagagagtgtt 41727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 10868029 - 10868094
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaa 255  Q
    |||||| | |||||||||||||| |||||||||||   || |||||||| ||||||||||||||||    
T  10868029 cacttatttttttattggatgaactcaatgtatgtttcaccattttgtgtggattcaattttcaaa 10868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 8671063 - 8671115
Alignment:
Q  266 acaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||| ||||||| ||||||| |||| ||||||||||||| |||||||||||    
T  8671063 acaattctttaaactaataaaatagtgagtattagagagagcgttcaaaagag 8671115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 5727346 - 5727397
Alignment:
Q  266 acaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 317  Q
    ||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||    
T  5727346 acaatgatttaaaccaataaaaaagtgagtactagagagggtgtttaaaaga 5727397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 1423789 - 1423855
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 261  Q
    ||||||||||| ||| |||||||||||||||| || | |||||  |  |||||||||||||||||||    
T  1423789 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 1423855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 7599578 - 7599532
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtat 222  Q
    |||||||| | || ||| |||||||||||||||||||||||||||||    
T  7599578 aacactctctctagcacctactcttttattggatgaaatcaatgtat 7599532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 13856552 - 13856506
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgta 221  Q
    ||||||||| | ||||||  |||||||||||||||||||||||||||    
T  13856552 caacactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 37489485 - 37489431
Alignment:
Q  181 tctttttaacacttactcttttattggatgaaatcaatgtatgtcctactatttt 235  Q
    ||||| ||||| ||| | |||||||||||||||||| |||||||||||| |||||    
T  37489485 tctttctaacatttatttttttattggatgaaatcattgtatgtcctacaatttt 37489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 315
Target Start/End: Original strand, 25915088 - 25915195
Alignment:
Q  211 aaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga---cccacaattatttaaaccaataaaaaagtgtgtattagagagagt 307  Q
    ||||||||||||||||||||| ||| |  || ||| ||||||||||||||||    ||||| | |||| | ||||||||| |||| ||| ||| ||||||    
T  25915088 aaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagtactagggagagt 25915187  T
Q  308 gttcaaaa 315  Q
    ||| ||||    
T  25915188 gttaaaaa 25915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 310
Target Start/End: Complemental strand, 45525033 - 45524897
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt-agacccacaattat 273  Q
    ||||||||| || |||||| | | | ||||||||| ||||||||||||| || || | |||| | |||  | |||| |||||||| | |||||| || ||    
T  45525033 caacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttgagtggaacccatttccaaagtgtgaaacccaccatgat 45524934  T
Q  274 ttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    |||| ||||| |||||||| || || |||||||||||    
T  45524933 ttaagccaattaaaaagtgagtgttggagagagtgtt 45524897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 3e-46; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 20493602 - 20493452
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | ||||||| |||| |||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||||||||||||||||| |||    
T  20493602 caacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatattcaaagtgtagacccacaatgatt 20493503  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| | |||| ||| ||||||||||||||||||||| ||||||    
T  20493502 taaaccaataagagagtgagtaatagagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 204 - 325
Target Start/End: Complemental strand, 52124084 - 52123963
Alignment:
Q  204 ttggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagaga 303  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  52124084 ttggatgaaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagaga 52123985  T
Q  304 gagtgttcaaaagagtgtgttg 325  Q
    ||||||||||||||| ||||||    
T  52123984 gagtgttcaaaagagagtgttg 52123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 18427321 - 18427161
Alignment:
Q  163 gaggaatattagcaacactcttttt--aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 260  Q
    |||||||  ||||||||||| ||||  |||||| |||| ||||||||||||||||||||||||||| || |||||||| || ||| ||||||||||||||    
T  18427321 gaggaatgctagcaacactcatttttcaacactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgta 18427222  T
Q  261 gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 321  Q
    |||||||||| |||||||||||||| | |||| ||||||||||| |||||||| |||||||    
T  18427221 gacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaagagagtgt 18427161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 28529276 - 28529424
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| |||||||||||||||||||||||||||||||| || | | ||||||  |||||||||||||||||||||||||||| |||    
T  28529276 caacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactgtgtggg--ttcaattttcaaagtgtagacccacaatgatt 28529373  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| | |||| ||||||||||| ||||||||||||| ||||||    
T  28529374 taaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 28529424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 41452032 - 41451902
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||||||||||||||| |||||||| || | |||||| || |||||||||||||| ||||||||||||| |||||||||||||| | |||| |    
T  41452032 actcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtagacccacaatgatttaaaccaataagagagtgag 41451933  T
Q  295 tattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||||||||||| ||||||    
T  41451932 tattagagagagtgttcaaaagagagtgttg 41451902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 24734748 - 24734878
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||||||||||||||| |||||||| || | |||||| || |||||||||||||| |||| |||||||| |||||||||||||| | |||| |    
T  24734748 actcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtaggcccacaatgatttaaaccaataagagagtgag 24734847  T
Q  295 tattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||||||||||| ||||||    
T  24734848 tattagagagagtgttcaaaagagagtgttg 24734878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 37776845 - 37776710
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| ||||||||||| ||||||||||||||||||||||| | |||||| || |||||||||||||||||||||| ||||| |||||||||| ||| | |    
T  37776845 cactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacctacaatgatttaaaccactaagaga 37776746  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||| ||||||||||| ||||||| || || ||||||    
T  37776745 gtgagtattagagagggtgttcataaaagagtgttg 37776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 20791321 - 20791462
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||| ||||||||||| || |||| |||||    
T  20791321 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 20791420  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  20791421 aaccaataagaaagtgagtattagagagagtgttcaaaagag 20791462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 5452217 - 5452069
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||| ||| || | |||||| ||||||||||||| |||||||||||  |||  |||    
T  5452217 caacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaattttctaagtgtagacc--caaggatt 5452120  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| |||||| | || | ||||| ||||||||||||||||||| ||||||    
T  5452119 taaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttg 5452069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 14236044 - 14236192
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||| ||||||| || | ||| || |  ||| |||| ||||||||||| ||||||| |||||    
T  14236044 acactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataattta 14236143  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
     ||||||||||||||| |||||||| ||||||||||||| || ||||||    
T  14236144 gaccaataaaaaagtgagtattagaaagagtgttcaaaacagagtgttg 14236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 26310603 - 26310495
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || ||||||||||||||||||||||||||||||||||||| || ||||| ||  | |||||||||||||||||||||||| ||| |||    
T  26310603 caacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgatt 26310504  T
Q  275 taaaccaat 283  Q
    |||||||||    
T  26310503 taaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 318
Target Start/End: Complemental strand, 29588895 - 29588747
Alignment:
Q  172 tagcaacactc--tttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaa 269  Q
    |||||||||||  |||| ||||| | |||||||||||||| |||||||||||||||||   | ||| || |  |||||||||||||||||||||||||||    
T  29588895 tagcaacactcacttttcaacacctgctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaa 29588796  T
Q  270 ttatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    | ||||||| |||||| | |||| || ||| ||||||||||||||||||    
T  29588795 tgatttaaatcaataagagagtgagtgttatagagagtgttcaaaagag 29588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 46450103 - 46450224
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctacta-ttttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaa 288  Q
    |||| ||||||||||| |||| ||||||||||||||| || | ||||||| || ||| |||| ||||||||||||||||||| |||||||||||||| |     
T  46450103 cactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatttgcaaagtgtagacccacaatgatttaaaccaataagag 46450202  T
Q  289 agtgtgtattagagagagtgtt 310  Q
    |||| |||||||||||||||||    
T  46450203 agtgagtattagagagagtgtt 46450224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 191 - 317
Target Start/End: Complemental strand, 50156801 - 50156675
Alignment:
Q  191 acttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaag 290  Q
    |||||||  ||||||| ||||||| ||||||||| | || | |||| |||| ||||||||| |||||||||||||||||| |||||||||||||| | ||    
T  50156801 acttacttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtgtagacccacaatgatttaaaccaataagagag 50156702  T
Q  291 tgtgtattagagagagtgttcaaaaga 317  Q
    || |||||| | |||||||||||||||    
T  50156701 tgagtattacaaagagtgttcaaaaga 50156675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 198 - 315
Target Start/End: Complemental strand, 8825113 - 8824996
Alignment:
Q  198 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtat 297  Q
    |||||||| |||||||||||| ||||||| || ||||| || || ||||||||||||||| || || |||||| |||||||||||||| | |||| ||||    
T  8825113 cttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctacactcacaataatttaaaccaataagagagtgagtat 8825014  T
Q  298 tagagagagtgttcaaaa 315  Q
    || |||||||||||||||    
T  8825013 taaagagagtgttcaaaa 8824996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 19345146 - 19345045
Alignment:
Q  186 ttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||||||| |  ||||||||||||||||||||||||||| || | ||||| ||| ||||||||||||| ||||||| |||||| ||||||||||||||    
T  19345146 ttaacacttatttatttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataa 19345047  T
Q  286 aa 287  Q
    ||    
T  19345046 aa 19345045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 325
Target Start/End: Original strand, 27243069 - 27243219
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatt 274  Q
    |||||||| | ||||||| ||||||||||||||| ||||||||| |||||| || | ||| || || ||| |||| ||||||||| |||||||| | |||    
T  27243069 aacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatgacccacattgatt 27243168  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||| ||||| | | |||| |||||||| |||||||||||||||| ||||||    
T  27243169 taacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttg 27243219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 22604587 - 22604687
Alignment:
Q  179 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 278  Q
    ||||| ||||||||| |||| |||||||||| |||| ||||||||||| || ||||||||||  ||||||||||||| ||||||| |||||| |||||||    
T  22604587 actctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaa 22604686  T
Q  279 c 279  Q
    |    
T  22604687 c 22604687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 46160985 - 46161113
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| ||||||||||||||||||||||||  |||||| || | ||||||  | ||| |||| ||||||||||| ||| ||| |||||||||||||| | |    
T  46160985 cactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttccaaagtgtagatccataatgatttaaaccaataagaga 46161084  T
Q  290 gtgtgtattagagagagtgttcaaaagag 318  Q
    ||| |||||||||||||||| ||| ||||    
T  46161085 gtgagtattagagagagtgtccaagagag 46161113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 55452152 - 55452037
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||||||| |||  |||||||||| || | |||||| || ||| |||| |||||||||||| || ||| |||||||||||| ||| |||| |    
T  55452152 actcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagactcataatgatttaaaccaatgaaagagtgag 55452053  T
Q  295 tattagagagagtgtt 310  Q
    ||||||||||||||||    
T  55452052 tattagagagagtgtt 55452037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 15790526 - 15790377
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||| ||| |||||||||||  |||||||||| |||||||||||||||  || ||||| ||| |   |||||||||||||||||  ||| ||| |||    
T  15790526 caacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtag-gccataatgatt 15790428  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| | |||| |||||||||||| | ||||||| || ||||||    
T  15790427 taaaccaataagagagtgagtattagagagattattcaaaaaagagtgttg 15790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 318
Target Start/End: Original strand, 48351460 - 48351602
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| ||||| ||  ||||||||||||||| |||||||| ||||||  |||| |||||| || |||||||||||||||||| | ||| ||| ||||    
T  48351460 aacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgtatatccataatgattt 48351559  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||| |||||| | |  | |||||||||| | ||||||||||||    
T  48351560 aaatcaataagagaaagagtattagagaaaatgttcaaaagag 48351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 324
Target Start/End: Original strand, 29755523 - 29755672
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||| ||| ||||||||  |||||||||| | ||  ||||||| |||||   |||| |||||| || |||||||||||||||||||| | ||||| |||    
T  29755523 caacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaattttcaaagtgtagatcaacaatgatt 29755622  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgtt 324  Q
    ||||||||||| |  ||  ||||||||| ||||||||||||||| |||||    
T  29755623 taaaccaataagagggtaggtattagagggagtgttcaaaagagagtgtt 29755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 315
Target Start/End: Complemental strand, 2419596 - 2419481
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 299  Q
    ||||||||||| |||||||| ||||||||| | ||||   |  ||| |||| ||| ||||||||||||||| |||||||||||||| |||||| ||||||    
T  2419596 tttattggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtatta 2419497  T
Q  300 gagagagtgttcaaaa 315  Q
     ||| |||||||||||    
T  2419496 aagaaagtgttcaaaa 2419481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 24429125 - 24429050
Alignment:
Q  232 ttttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagt 307  Q
    ||||||| || ||||||||| |||||||||| ||||||| |||||||||||||||| |||| ||||||||||||||    
T  24429125 ttttgtgagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagagagt 24429050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 44844026 - 44844148
Alignment:
Q  197 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgt 295  Q
    |||||||||| || |||| ||||||||||| || ||||  || |  ||||||||| |||||||| |||||||||| |||||| |||||||||||||| ||    
T  44844026 tcttttattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagt 44844125  T
Q  296 attagagagagtgttcaaaagag 318  Q
     |||||||||||||  |||||||    
T  44844126 gttagagagagtgtcaaaaagag 44844148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 41387599 - 41387719
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||| |||||||||| ||||| |||||| ||  ||||||||||| || || ||||||||||||| ||||||||||| |||||| | ||||| | |    
T  41387599 cactcactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttcaaagtgcagacccacaatgatttaatcaaataagaga 41387698  T
Q  290 gtgtgtattagagagagtgtt 310  Q
     || ||||| |||||||||||    
T  41387699 ttgagtattggagagagtgtt 41387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 213 - 320
Target Start/End: Original strand, 38414708 - 38414815
Alignment:
Q  213 atcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttca 312  Q
    |||||||||||||| || |||||||| || || |||||| |||||||||| |||| || |||||||||||||| | |||| || ||| ||||| || |||    
T  38414708 atcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtgagtgttaaagagaatgctca 38414807  T
Q  313 aaagagtg 320  Q
    ||||||||    
T  38414808 aaagagtg 38414815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 41607459 - 41607546
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    ||||||||||| ||||||| ||||||  ||||||||||| |  || ||||||||||||||||| ||||| ||||||||| ||||||||    
T  41607459 tttattggatgtaatcaatatatgtctcactattttgtgtgagtttaattttcaaagtgtagatccacagttatttaaatcaataaaa 41607546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 138801 - 138921
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||||||||||| ||||||||||||||||||  || |||||||  | |||||||||| ||| |||| ||  ||||| ||||||| |||||||| |    
T  138801 cactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatcaataaaaga 138900  T
Q  290 gtgtgtattagagagagtgtt 310  Q
    ||  |||||| |||| |||||    
T  138901 gtaagtattaaagagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 29388683 - 29388611
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    ||||||||||||||||||||| |||||| ||||||  |||||| | |||| || |||||||||||||||||||    
T  29388683 ttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgttcaaaa 29388611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 10948649 - 10948588
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagag 304  Q
    ||||||||| |||||||| ||||||||| |||||||||||||||| |||| |||||| ||||    
T  10948649 ttcaatttttaaagtgtaaacccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 37285378 - 37285435
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagag 304  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||  |||||||||||    
T  37285378 atttttaaagtgcagacccacaataatttaaaccaataaaaaagtaagtattagagag 37285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 315
Target Start/End: Complemental strand, 41707593 - 41707457
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 277  Q
    |||||| | ||||||| ||||| | ||||||| ||||||||||||||   |  | |||||| || ||||||||| ||||| |||||||||||| ||||||    
T  41707593 cactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatagacccacaataatttaa 41707494  T
Q  278 accaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    ||| |||| ||| |  || ||| |||||||||||||||    
T  41707493 acc-ataagaaaataagtgttaaagagagtgttcaaaa 41707457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 287
Target Start/End: Complemental strand, 50661678 - 50661566
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatt 274  Q
    |||||||| | ||||||||||||||||||| ||| ||||||||| |||||| || | ||| || || ||| |||| |||| |||| |||||||| | |||    
T  50661678 aacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccacattgatt 50661579  T
Q  275 taaaccaataaaa 287  Q
    ||| |||||||||    
T  50661578 taacccaataaaa 50661566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 318
Target Start/End: Original strand, 2009038 - 2009160
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||  |||||||| ||||||||||| || | ||| ||  | |||| |||| ||||||||||| |||||| ||||||| |||||||||| ||      
T  2009038 actcttttatcagatgaaattaatgtatgtcc-accactttatgtagtttcagtttttaaagtgtagactcacaataatttaaatcaataaaaaaatgaa 2009136  T
Q  295 tattagagagagtgttcaaaagag 318  Q
    ||||||||||  |||| |||||||    
T  2009137 tattagagaggatgtttaaaagag 2009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 325
Target Start/End: Complemental strand, 24749055 - 24748916
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataa 285  Q
    ||||||| | |||||||| || ||| |||||||||||||| || ||||| || || ||| ||||  |||||||||  || ||| | |||| | |||||||    
T  24749055 taacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcatccaataa 24748956  T
Q  286 aaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    || |||| || |||||||||||| ||||||||| ||||||    
T  24748955 aagagtgagtgttagagagagtgctcaaaagagagtgttg 24748916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 46575971 - 46576118
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattat 273  Q
    ||||||||| |  |||||| ||||| ||||||| ||||| |||||||||||| || | ||| || || ||| ||||||||| |||| | |||||| | ||    
T  46575971 caacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttcaaaatgtacgccccacattgat 46576070  T
Q  274 ttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 321  Q
    |||| || || | | |||| |||||| |||||||||| ||||||||||    
T  46576071 ttaaccctattagagagtgagtattaaagagagtgttgaaaagagtgt 46576118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 22856320 - 22856282
Alignment:
Q  246 aattttcaaagtgtagacccacaattatttaaaccaata 284  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  22856320 aattttcaaagtgtagatccacaattatttaaaccaata 22856282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 30355215 - 30355142
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt--gtattagagagagtgttcaaaagag 318  Q
    ||||||||| |||| |  |||||| |||||||| |||||||||||||  |||||||||||| ||||||||||||    
T  30355215 attttcaaaatgtatattcacaatgatttaaactaataaaaaagtgtgagtattagagagaatgttcaaaagag 30355142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 49072100 - 49072138
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  49072100 attttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 13809124 - 13809215
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataa 285  Q
    ||||||||||||||| |||||||||||||||| || ||||| || || ||| |||| |||||| || |||||||| |  ||||| |||||||    
T  13809124 actcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatatgacccacattgttttaacccaataa 13809215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 24748933 - 24748976
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgta 221  Q
    |||||| | ||||||| |||||||||||||||||||||||||||    
T  24748933 cactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 226
Target Start/End: Complemental strand, 46237183 - 46237152
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcc 226  Q
    ||||||||||||||||||||||||||||||||    
T  46237183 actcttttattggatgaaatcaatgtatgtcc 46237152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 27243100 - 27243054
Alignment:
Q  279 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||| |||| || |||||||||||||||||||||| ||||||    
T  27243100 ccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttg 27243054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 55283213 - 55283167
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtat 222  Q
    |||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  55283213 aacactctctttaacacttattctattattggataaaatcaatgtat 55283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 7419334 - 7419241
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaa 269  Q
    |||||||| | || |||| ||||||||||| ||| |||| ||| |||||||  |||||||||| |  ||| |||| ||||||||||| ||||||    
T  7419334 aacactctatgtagcactcactcttttattagataaaataaatatatgtccctctattttgtgtgagttctatttccaaagtgtagatccacaa 7419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 18722572 - 18722535
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgt 237  Q
    ||||||||||||||||||||||||||| || |||||||    
T  18722572 tttattggatgaaatcaatgtatgtcccaccattttgt 18722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 38138664 - 38138587
Alignment:
Q  250 ttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 327  Q
    |||||||| |||| ||||||| |||||||||||||| | |||  |||||| | | |||| ||||||||| ||||||||    
T  38138664 ttcaaagtatagatccacaatgatttaaaccaataagagagtaagtattaaataaagtgatcaaaagagagtgttgat 38138587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 742037 - 742089
Alignment:
Q  233 tttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||| |||||| ||||  |||||||||||||||||| |||||||| |||||    
T  742037 tttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataa 742089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 39186059 - 39186139
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 327  Q
    |||| ||||||||||| |  |||| ||||||| |||||| | || | ||||| |||||||| |||||||||| ||||||||    
T  39186059 atttccaaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagtattcaaaagagagtgttgat 39186139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 46156781 - 46156741
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatc 215  Q
    ||||||||| ||||||||| ||||||||||||| |||||||    
T  46156781 caacactctctttaacactcactcttttattgggtgaaatc 46156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 6e-44; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 34905359 - 34905509
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||| || | |||||  || |||||||||||||||||||||||||||| |||    
T  34905359 caacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatt 34905458  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| | |||| ||||||||||| ||||||||||||| ||||||    
T  34905459 taaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 34905509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 327
Target Start/End: Complemental strand, 10133315 - 10133163
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | ||||||| |||| ||||||||||||||| | ||||||||| || | ||| ||||| |||||||||||||||||||| ||||||| |||    
T  10133315 caacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtagaaccacaatgatt 10133216  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 327  Q
    ||||||||||||| |||| |||||| || |||| |||||||||| ||||||||    
T  10133215 taaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttgat 10133163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 325
Target Start/End: Complemental strand, 16852119 - 16851980
Alignment:
Q  186 ttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||||||| |  |||||| |||||||| ||||||||||| || | ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  16852119 ttaacacttatttatttattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataa 16852020  T
Q  286 aaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
     | |||| ||||||| |||  |||||||||||| ||||||    
T  16852019 gagagtgggtattagggaggatgttcaaaagagagtgttg 16851980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 310
Target Start/End: Original strand, 32122818 - 32122953
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    |||||||||||  | |||| |||  ||||||||||||||||||| ||||||| || ||||||||||  |||||||||||||||||||||||||||| |||    
T  32122818 caacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatt 32122917  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||| ||||||||||||||  || |||||| ||||||    
T  32122918 taagccaataaaaaagtgaataatagagatagtgtt 32122953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 5106333 - 5106471
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||||| ||| ||||||||||| |||||||||||||||| || | |||||| ||  ||||||||||||||||| ||||||||  ||||||||||||||     
T  5106333 taacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacacccacaaggatttaaaccaataat 5106432  T
Q  287 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | ||||  |||||||||| ||||||||||||| ||||||    
T  5106433 agagtgaatattagagagtgtgttcaaaagagggtgttg 5106471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 21987317 - 21987458
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||| ||| || | ||| || |  ||| |||| ||||||||||| || |||| |||||    
T  21987317 acactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 21987416  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  21987417 aaccaataagaaagtgagtattagagagagtgttcaaaagag 21987458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 183 - 310
Target Start/End: Original strand, 2675926 - 2676053
Alignment:
Q  183 tttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaa 282  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||| || | |||||   | || |||||||||| ||||||||||||||  ||||||||||    
T  2675926 tttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaa 2676025  T
Q  283 taaaaaagtgtgtattagagagagtgtt 310  Q
    |||||||||| |||||||||||||||||    
T  2676026 taaaaaagtgagtattagagagagtgtt 2676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 310
Target Start/End: Complemental strand, 31116280 - 31116146
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | ||||| | |||||| ||||||||||||||||||||||||| |||| |||||| |  ||| |||| ||| ||||| ||||||||| ||||    
T  31116280 aacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgattt 31116181  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    |||||||||| | |||| |||||||||||||||||    
T  31116180 aaaccaataagagagtgagtattagagagagtgtt 31116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 199 - 324
Target Start/End: Complemental strand, 32112850 - 32112725
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    ||||||||||||||||||||| |||||  || |||||||| || ||  |||||||||||||||| ||||||| ||||||| |||||| | ||||  ||||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatt 32112751  T
Q  299 agagagagtgttcaaaagagtgtgtt 324  Q
    ||||||| |||||||||||| |||||    
T  32112750 agagagaatgttcaaaagagagtgtt 32112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 445856 - 445976
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| ||| |||||||||||||||||||||||||||  || | |||||| || ||||||||||||||| ||||  |||||| |||||||||||||| | |    
T  445856 cactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagtctagagtcacaatgatttaaaccaataagaga 445955  T
Q  290 gtgtgtattagagagagtgtt 310  Q
     || |||||||||||||||||    
T  445956 atgagtattagagagagtgtt 445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 325
Target Start/End: Original strand, 1392675 - 1392800
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||||||||||||||||||  |||| |||||  |  ||||||||| ||| ||||| |||||||| |||||||||||||| | |||| |||||    
T  1392675 ttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtatt 1392773  T
Q  299 agagagagtgttcaaaagagtgtgttg 325  Q
    ||| || ||||||||||||| ||||||    
T  1392774 agatagggtgttcaaaagagagtgttg 1392800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 31443982 - 31444132
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||||||||||||| | |||||||||||||||||| ||| ||||| | || ||||||||  | ||||||||||||||||| ||| |||||  |||    
T  31443982 caacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaattttcaaagtgttgactcacaaggatt 31444081  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||  ||| || | |||  ||||||||||| ||||||| |||| ||||||    
T  31444082 taaattaatgaacacgtgaatattagagagaatgttcaagagagagtgttg 31444132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 17144813 - 17144682
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||||||| |||||||| ||||||||||| ||||| | ||  |||||||  | || ||||||||||||||||||||||||| |||||||| ||||||  |    
T  17144813 cacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaactaataaagga 17144714  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgt 321  Q
    ||  |||||| |||||||| | ||||||||||    
T  17144713 gtaagtattaaagagagtggttaaaagagtgt 17144682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 8441948 - 8441866
Alignment:
Q  233 tttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    ||||||||  ||||||||||||||||||||||  |||| || ||||||||||||| |||| ||||||||||||||||||||||    
T  8441948 tttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaa 8441866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 8450752 - 8450670
Alignment:
Q  233 tttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    ||||||||  ||||||||||||||||||||||  |||| || ||||||||||||| |||| ||||||||||||||||||||||    
T  8450752 tttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaa 8450670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 12780897 - 12780772
Alignment:
Q  194 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt 293  Q
    |||| ||||||| | || ||||||||||||||  |||| ||||||  | |||||||||||||||||||| ||||||| ||||||||||||||   | ||     
T  12780897 tacttttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatga 12780798  T
Q  294 gtattagagagagtgttcaaaagagt 319  Q
     |||||||||| ||||||||||||||    
T  12780797 atattagagagggtgttcaaaagagt 12780772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 325
Target Start/End: Complemental strand, 12753916 - 12753767
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||||| || || | ||||||| ||||||| ||||  ||| |||||| || | |||||| || ||| |||||||  ||||| || |||||| ||||    
T  12753916 aacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctattttcagggtgtacactcacaatgattt 12753817  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||||||| || | ||||||||||||||||| ||||||| ||||||    
T  12753816 aaactaataaaagagcgagtattagagagagtgttgaaaagagagtgttg 12753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 16187521 - 16187441
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||||||||| ||||||||||||||||||||   |||| |||||||  |||||||| ||||||| ||||||    
T  16187521 ttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--agagtgttgaaaagagagtgttg 16187441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 16187739 - 16187659
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||||||||| ||||||||||||||||||||   |||| |||||||  |||||||| ||||||| ||||||    
T  16187739 ttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--agagtgttgaaaagagagtgttg 16187659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 325
Target Start/End: Original strand, 10060883 - 10061033
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatt 274  Q
    |||||||||| ||||| | |||||||||||   ||||||||||||||||||  | | ||| || || ||| |||||||||||||||  || ||| | ||     
T  10060883 aacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccattttcaaagtgtaggtcctacattgatc 10060982  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | | |||||||||||||| || |||||||||||| ||||||||| ||||||    
T  10060983 tcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttg 10061033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 19090352 - 19090221
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataaaaaagtgt 293  Q
    ||||||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||||  || ||| | | || ||||||||||| ||||     
T  19090352 actcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtga 19090253  T
Q  294 gtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||  ||||||||||| ||||||||| ||||||    
T  19090252 gtgctagagagagtgctcaaaagagagtgttg 19090221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 318
Target Start/End: Complemental strand, 32599085 - 32598962
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||||||| |||  ||||||||||  | | |||||| || | | |||| |||||||||||  |||||| ||||||| |||||||| |||| |    
T  32599085 actcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtgag 32598986  T
Q  295 tattagagagagtgttcaaaagag 318  Q
    ||||| ||||| |||| |||||||    
T  32598985 tattaaagagaatgtttaaaagag 32598962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 12785072 - 12784986
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||||| || |||||||||||||| ||||| ||| ||    |||||||||||||||||||| ||| ||| ||||||||||||||    
T  12785072 ttttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataa 12784986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 899943 - 900028
Alignment:
Q  202 tattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    ||||||||||||||||  ||||| | ||||||||  |||| ||||||||||| | | |||||||||||| | ||||||||||||||    
T  899943 tattggatgaaatcaacatatgttccactattttacgggggttcaattttcataatatagacccacaatgaattaaaccaataaaa 900028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 2931609 - 2931660
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaatttt 251  Q
    |||||| ||||||||||||||||||||||| ||||||||| | |||||||||    
T  2931609 tttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 373563 - 373513
Alignment:
Q  171 ttagcaacactctttttaacacttactcttttattggatgaaatcaatgta 221  Q
    ||||||||||||| | ||||||||||| ||||||||||| |||||||||||    
T  373563 ttagcaacactctctctaacacttactattttattggataaaatcaatgta 373513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 12327365 - 12327299
Alignment:
Q  172 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtg 238  Q
    |||||||||||| | || || | |||||||||||||||  |||||||||||||||||| ||||||||    
T  12327365 tagcaacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtg 12327299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 12690276 - 12690386
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt-agacccacaattatt 274  Q
    |||||||| | |||||||| ||||||||||||||||||| |||| |||||  || | |||  | ||| || |||| |||||||| ||||||||  | |||    
T  12690276 aacactctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccactttaagtggaatctatttccaaagtgtgagacccaccttgatt 12690375  T
Q  275 taaaccaataa 285  Q
    |||||||||||    
T  12690376 taaaccaataa 12690386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 16436108 - 16436197
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||| |||  |||||||||||||||| || || |||||||| || ||| ||||  |||||||||||||| ||  ||||||||||||||    
T  16436108 actctttcattatatgaaatcaatgtatgccc-accattttgtgtgggttctatttctaaagtgtagacccaaaaagatttaaaccaataa 16436197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 35128860 - 35128794
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 261  Q
    ||||||||||||| | |||||||||||||||| || | ||| || || ||| |||||||||||||||    
T  35128860 actcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 6531440 - 6531399
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctacta 231  Q
    |||| ||||||||||||| |||||||||||||||||| ||||    
T  6531440 cactcactcttttattgggtgaaatcaatgtatgtcccacta 6531399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 12488201 - 12488156
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgt 220  Q
    ||||||| ||| ||| ||| ||||||||||||||||||||||||||    
T  12488201 caacactttttctaatactcactcttttattggatgaaatcaatgt 12488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 6e-44; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 8108979 - 8109129
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| ||||||||||||| |||||||||||||||||| |||| ||||||    |||||||||||||||||||||||||||| |||    
T  8108979 caacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgtagacccacaatgatt 8109078  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  8109079 taaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttg 8109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 50164419 - 50164560
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | || |||| |||| |||||||||| |||||||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  50164419 aacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtagactcacaatgattt 50164518  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 317  Q
    |||||||||| |||||| | ||||||||||||||||||||||    
T  50164519 aaaccaataagaaagtgagcattagagagagtgttcaaaaga 50164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 195 - 318
Target Start/End: Original strand, 43771169 - 43771292
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||||||||||||||||||||||| || | | |||| || |||||||||||||||||||||||||||| |||||||||||||| | |||| |    
T  43771169 actcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgag 43771268  T
Q  295 tattagagagagtgttcaaaagag 318  Q
    ||||| |||| |||||||||||||    
T  43771269 tattaaagagggtgttcaaaagag 43771292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 325
Target Start/End: Original strand, 24834625 - 24834751
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||| ||||||||||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||||||| | ||||  ||||    
T  24834625 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgactatt 24834724  T
Q  299 agagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| ||| ||||||| ||||||    
T  24834725 agagagagagtttaaaagagagtgttg 24834751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 39471184 - 39471330
Alignment:
Q  179 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 278  Q
    ||||| ||||||||  ||||||||||| |||||||||||||||||||| || | ||||||  | |||||| ||||||||||||||||||||| |||||||    
T  39471184 actctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtagacccacaatgatttaaa 39471283  T
Q  279 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||| | |||| |||||||||||| |||| ||||||| ||||||    
T  39471284 ccaataagagagtgagtattagagagaatgtttaaaagagagtgttg 39471330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 722180 - 722322
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| ||| ||||||||||||||||||| |||||||| || | ||||||    ||||||||| |||||||||||||||||| |||    
T  722180 caacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatt 722279  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 317  Q
    ||||||||||| | |||| ||||||||||||||||||||||||    
T  722280 taaaccaataagagagtgagtattagagagagtgttcaaaaga 722322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 26361445 - 26361315
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||||||||| |||||||||| || || |||||||| || |||||| ||||||||||||||||| ||| ||||||||||||||   |||| |    
T  26361445 actcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataagtgagtgag 26361346  T
Q  295 tattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||| ||||||||||||| ||||||    
T  26361345 tattagagagggtgttcaaaagagagtgttg 26361315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 24938558 - 24938430
Alignment:
Q  189 acacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaa 288  Q
    ||||| |||||||||||||||| ||||||||||||||| || |||||||  |||||||||||| |||||||||||| ||||| |||||||||||||| |     
T  24938558 acactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagag 24938459  T
Q  289 agtgtgtattagagagagtgttcaaaaga 317  Q
    |||  |||||||||| |||||| ||||||    
T  24938458 agtaagtattagagaaagtgttgaaaaga 24938430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 33653626 - 33653511
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||| |||||| |||||||||||||||||||| || ||||||||||| ||||||||||||| | | || ||||||| |||||||||||||| |||||| |    
T  33653626 actcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattttcaaaatattgatccacaatgatttaaaccaataagaaagtgag 33653527  T
Q  295 tattagagagagtgtt 310  Q
    ||||||||||||||||    
T  33653526 tattagagagagtgtt 33653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 754725 - 754595
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||||| ||| |||||||||||||| |||| |||||||| || | ||||||    ||||||||| |||||||||||||||||| ||||||||||||||     
T  754725 taacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataag 754626  T
Q  287 aaagtgtgtattagagagagtgttcaaaaga 317  Q
    | |||| ||||||||||||||||||||||||    
T  754625 agagtgagtattagagagagtgttcaaaaga 754595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 47009212 - 47009355
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||||| || |||| ||||||||||||||| |||| ||||| ||||  ||   |||||| |  ||||||||||||||||||||  |||||| |||    
T  47009212 caacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacacaatgatt 47009311  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||    
T  47009312 taaaccaataagaaagtgagtattagagagggtgttcaaaagag 47009355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 20454563 - 20454704
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| ||||||||||| ||| |||||||||||||||| || | ||||||  | |||||||||||||||||||| ||||||| |||    
T  20454563 caacactctctctagcactcactcttttattagataaaatcaatgtatgtcc-ac-actttgtgttggttcaattttcaaagtgtagatccacaatgatt 20454660  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||| |||||| | |||| || ||||||||||||||||||||||    
T  20454661 taaatcaataacagagtgagtgttagagagagtgttcaaaagag 20454704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 46287479 - 46287587
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||||||| |||||||||||||||| ||| |||||| ||||| |||||| | |||||||||||||||||| ||| |||||| |||||||||||||  |||    
T  46287479 cacttactattttattggatgaaattaatatatgtcttactactttgtgtgtattcaattttcaaagtgttgactcacaatgatttaaaccaatacgaaa 46287578  T
Q  290 gtgtgtatt 298  Q
    ||| |||||    
T  46287579 gtgggtatt 46287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 34129542 - 34129407
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||||| |||||||||| |||||||||| ||| || | |||||| |  ||||||||||||||||| ||| ||||||  ||||||||||||||| |    
T  34129542 cactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaaccaataaaaga 34129443  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||| ||||||||||  ||||||| ||||| ||||||    
T  34129442 gtgagtattagagattgtgttcagaagagagtgttg 34129407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 5044690 - 5044568
Alignment:
Q  182 ctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaacca 281  Q
    |||||||||| | ||| |||||||||||||||||||| ||||||  ||||||||||| |  ||||||||| ||| |||||||||||||  ||||||||||    
T  5044690 ctttttaacattcacttttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaacca 5044591  T
Q  282 ataaaaaagtgtgtattagagag 304  Q
    |||||| | ||  ||||||||||    
T  5044590 ataaaagaatgaatattagagag 5044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 50481702 - 50481592
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    |||||||||||||  |||| ||||||||||||||||||||||| |||||||  || | |||||  || ||| ||||||||||||||||| |||||| |||    
T  50481702 caacactctttttctcactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatt 50481603  T
Q  275 taaaccaataa 285  Q
    |||||||||||    
T  50481602 taaaccaataa 50481592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 178 - 315
Target Start/End: Complemental strand, 48339494 - 48339357
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 277  Q
    |||||| ||||||||| ||||| ||||||||  |||||||||||||| | || | |||||| || |||||||||||||| ||||||||| |||  |||||    
T  48339494 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaa 48339395  T
Q  278 accaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    |||||||||| ||||  | ||||||| |||| ||||||    
T  48339394 accaataaaagagtggatgttagagaaagtgctcaaaa 48339357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 45311078 - 45310962
Alignment:
Q  202 tattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattaga 301  Q
    ||||||||||||||||| ||||||| || | |||||||||||||||||||||||||| ||||  ||||| ||||||| |||||| | |||  ||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattaga 45310979  T
Q  302 gagagtgttcaaaagag 318  Q
    |||   |||||||||||    
T  45310978 gagtcagttcaaaagag 45310962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 22542423 - 22542546
Alignment:
Q  194 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt 293  Q
    ||||||||||||| |||||||||| |||||| | || | |||||| || ||||||||||||||  ||| |||||||| |||||||| ||||| | ||||     
T  22542423 tactcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtga 22542522  T
Q  294 gtattagagagagtgttcaaaaga 317  Q
    |||||| | |||||||||||||||    
T  22542523 gtattaaaaagagtgttcaaaaga 22542546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 31251015 - 31250928
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    ||||||||||||||||||||||||||| || ||||| |||   ||||||||||||| |||||||||||||| ||||||| ||||||||    
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaa 31250928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 325
Target Start/End: Original strand, 49242194 - 49242343
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | ||||| | ||| ||| |||||||||||||||| ||||||| |  | |||||| || |||||||||||| |||||||  |||||| ||||    
T  49242194 aacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgattt 49242293  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||| | | || |||| | |||||||||| ||||||| ||||||    
T  49242294 aaaccaataagagaatgagtatcatagagagtgtttaaaagagagtgttg 49242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 315
Target Start/End: Complemental strand, 45081898 - 45081759
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||| |||||||| |||||| ||||||||| |||| |||  ||| |||| |||| |||||||| || | | |||| ||||||||| || |||||| ||||    
T  45081898 aacattctttttagcacttattcttttatttgatggaatacatgcatgttctaccattttgtgtgggtcctatttccaaagtgtacactcacaataattt 45081799  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    |||||||||||| |||| |||||||| ||| | |||||||    
T  45081798 aaaccaataaaagagtgagtattagaaagaattttcaaaa 45081759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 10169782 - 10169692
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||| |||||||||||||||||| |||||||||| | |||||| |  |||||||||||||   |||| ||||||||||||||||||||||    
T  10169782 actctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacatagatccacaattatttaaaccaataa 10169692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 325
Target Start/End: Original strand, 39016687 - 39016837
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag-acccacaattatt 274  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||||||| || |||||  | || ||| |||| |||||||||| | | ||| | |||    
T  39016687 aacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttccaaagtgtagtatctacattgatt 39016786  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | | | ||||||| |||  ||  ||||||||||||||||||||| ||||||    
T  39016787 ttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttg 39016837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 49077272 - 49077382
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||| ||| |||| |||| | ||||||||| ||| |||| ||| ||||||| || | |||||| || ||||||||| |||||||||||||||||| |||    
T  49077272 caacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatt 49077371  T
Q  275 taaaccaataa 285  Q
    |||||||||||    
T  49077372 taaaccaataa 49077382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 40991667 - 40991606
Alignment:
Q  254 aagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    ||||||||||||||||| |||||||||||||||| |||| |||| |||||||||||||||||    
T  40991667 aagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaa 40991606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 37451156 - 37451027
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||||| |||||||||||||||  |||| |||||  || ||| | |||||| |  ||| ||||||||||||||||| | |||| |||||||||||||||    
T  37451156 taacactcactcttttattggatagaatccatgtacatcttaccaatttgtgag--ttctattttcaaagtgtagactcgcaatgatttaaaccaataaa 37451059  T
Q  287 aaagtgtgtattagagagagtgttcaaaagag 318  Q
    | |||| ||||||||||  ||||| |||||||    
T  37451058 agagtgagtattagagaaggtgtttaaaagag 37451027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 38537654 - 38537528
Alignment:
Q  194 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaa---agtgtagacccacaattatttaaaccaataaaaaag 290  Q
    |||| ||||||| ||||||||||||||||||| ||||| |||||  |  ||||||||||||   ||||||||  || ||| ||||||| |||||||| |     
T  38537654 tactattttatttgatgaaatcaatgtatgtcttactactttgtatgagttcaattttcaacaaagtgtagattcataatgatttaaatcaataaaagaa 38537555  T
Q  291 tgtgtattagagagagtgttcaaaaga 317  Q
    ||  |||||||||||||||||||||||    
T  38537554 tgattattagagagagtgttcaaaaga 38537528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 50571887 - 50571982
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 270  Q
    ||||||||| | || |||||||||||||||| ||||||||||||||||| || |  | ||| || || ||||||||||||||||||||||| ||||    
T  50571887 caacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttcaaagtgtagacccgcaat 50571982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 286
Target Start/End: Complemental strand, 49769960 - 49769850
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||| |||||||||||| ||||||||||||||||||||||||  ||| ||| |||||||| || |  ||  ||||||||||| || ||| ||||| ||||    
T  49769960 aacattctttttaacacatactcttttattggatgaaatcaaaatatatcccactattttatgtgagttttattttcaaagtataaacctacaatgattt 49769861  T
Q  276 aaaccaataaa 286  Q
    |||| ||||||    
T  49769860 aaactaataaa 49769850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 20225483 - 20225388
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||| |||||||||||||||| |||| ||| |||||| || | ||| || || ||| |||| |||||||||||| |||||| ||||||||||||||    
T  20225483 cactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttccaaagtgtagactcacaatgatttaaaccaataa 20225388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 318
Target Start/End: Complemental strand, 25719257 - 25719126
Alignment:
Q  188 aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaa 286  Q
    |||||| ||||| ||||||| |||||||||||||||||| || | ||| || || ||  |||| |||| |||| |||||||||| |||||| ||||| |     
T  25719257 aacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcag 25719158  T
Q  287 aaagtgtgtattagagagagtgttcaaaagag 318  Q
    | |||| |||||||||| | ||||||||||||    
T  25719157 agagtgagtattagagaaattgttcaaaagag 25719126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 198 - 276
Target Start/End: Complemental strand, 46242078 - 46242000
Alignment:
Q  198 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| ||||||||||| ||||||||| || ||||||||  | ||||||||||||| | |||||||||||| |||||    
T  46242078 cttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatatagacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 52671877 - 52671995
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||||||| ||||||||||| || ||||| ||    ||||||||| |||||||| |  | |||| |||||||| ||||| | |||| |||||    
T  52671877 ttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatagtgagtatt 52671976  T
Q  299 agagagagtgttcaaaaga 317  Q
    | |||||||||| ||||||    
T  52671977 aaagagagtgtttaaaaga 52671995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 4138913 - 4138998
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||||||||||||||||||||||| || || || |  |||||| |||| |||||||||||| | |||| ||||||| ||||||    
T  4138913 tttattggatgaaatcaatgtatgtcccaccatattttatggattctatttccaaagtgtagactcgcaataatttaaatcaataa 4138998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 41153351 - 41153239
Alignment:
Q  179 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 278  Q
    ||||| |||| |||||||||||||||||||||||||  ||| |||||| || | ||||||  | ||| ||||  |||||||| |  |||||| ||||| |    
T  41153351 actctctttatcacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgatttaga 41153252  T
Q  279 ccaataaaaaagt 291  Q
    |||||||||||||    
T  41153251 ccaataaaaaagt 41153239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 325
Target Start/End: Original strand, 5545673 - 5545752
Alignment:
Q  247 attttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||| |||| |||||||| | |||||| | ||| |||||||  ||||||||||||||||||||||||| ||||||    
T  5545673 attttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaaagagagtgttg 5545752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 19447174 - 19447305
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag-acccacaattatttaaaccaataaaaaagtgt 293  Q
    ||||| ||||||| ||||| |||||||||||| || | ||| || || ||| ||||||||| || || ||| ||||| ||||||  |||| | | ||||     
T  19447174 actctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtga 19447273  T
Q  294 gtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||| |||||||||||||||||| ||||||    
T  19447274 gtattaaagagagtgttcaaaagagagtgttg 19447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 49682924 - 49682834
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||||| ||||||||||||||||| ||  || | ||| |  | ||||||||||||||||||||| |||||   ||||||||||||||||||    
T  49682924 ttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgtagagccacatcgatttaaaccaataaaaaa 49682834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 16178746 - 16178697
Alignment:
Q  172 tagcaacactctttttaacacttactcttttattggatgaaatcaatgta 221  Q
    |||||||||||| | |||| || |||||||||||||||||||||||||||    
T  16178746 tagcaacactctctctaactctcactcttttattggatgaaatcaatgta 16178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 19937301 - 19937180
Alignment:
Q  203 attggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagag 302  Q
    |||||||  ||||||||||||||| || ||| | || |  ||| ||||||||||| |||| | ||||| ||| ||||||| |||| |||| | |||| ||    
T  19937301 attggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatagatcgacaatgattcaaaccaacaaaagagtgagaattaaag 19937202  T
Q  303 agagtgttcaaaagagtgtgtt 324  Q
    |||||||| ||||||| |||||    
T  19937201 agagtgtttaaaagagagtgtt 19937180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 30867074 - 30866945
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga-cccacaattatttaaaccaataaaaa 288  Q
    |||| ||| ||||||||||| |||| ||||||||||| || | ||| || || ||| |||||||||||||||| |||||| |  ||| | | ||||||||    
T  30867074 cactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccacattgttttcacctaataaaaa 30866975  T
Q  289 agtgtgtattagagagagtgttcaaaagag 318  Q
    | || ||  ||||||||||||| |||||||    
T  30866974 aatgagtgctagagagagtgtttaaaagag 30866945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 37050695 - 37050642
Alignment:
Q  265 cacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||| |||||||||||||||||| || |||||| ||||||| ||||||||||    
T  37050695 cacaatgatttaaaccaataaaaaaatgagtattaaagagagtattcaaaagag 37050642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 325
Target Start/End: Original strand, 44832492 - 44832637
Alignment:
Q  181 tctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaac 279  Q
    ||||| || |||| ||| ||||||||| |||||| ||||||||||| || ||||| || |||||| |||| ||||||| | | || ||| | |||| | |    
T  44832492 tctttctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtggattccatttccaaagtgcaggtcctacattgatttcacc 44832591  T
Q  280 caataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||| || ||  | ||||||||| ||||||||| ||||||    
T  44832592 caataaaaaaatgagtgctggagagagtgctcaaaagagagtgttg 44832637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 21777000 - 21776948
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctac 229  Q
    ||||||| | ||||| | ||||||||||||||| |||||||||||||||||||    
T  21777000 acactctctctaacattcactcttttattggataaaatcaatgtatgtcctac 21776948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 29699527 - 29699650
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| ||||||||||||||||||||||||  |||||| || | ||||||  | ||| | ||||||||| ||| || ||||| ||||||| |||||| | |    
T  29699527 cactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttcta-tttcaaagtatagcccgacaatgatttaaaacaataagaga 29699625  T
Q  290 gtgtgtattagagagagtgttcaaa 314  Q
    |||  ||||||| ||||||| ||||    
T  29699626 gtgaatattagatagagtgtacaaa 29699650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 2088810 - 2088735
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    ||||||| ||||||| ||||  |||||||||||||||||| || | ||| || |||||| |||| |||||||||||    
T  2088810 taacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagtgtaga 2088735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 6212734 - 6212785
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcc 226  Q
    ||||||| |||||| |||||||| ||||||| |||||||| |||||||||||    
T  6212734 caacactgtttttatcacttactattttattcgatgaaattaatgtatgtcc 6212785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 38636375 - 38636470
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||| ||||||||||| ||| |||||||||||||||  |||| ||| || || |  |||||| |||||||||| ||||||| ||||| | ||||||    
T  38636375 cactcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatatcaataa 38636470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 52279351 - 52279276
Alignment:
Q  240 ggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    |||||||||||||||||| |||||||||||| ||||| | |||||  | ||||  ||||||| |||||||| ||||    
T  52279351 ggattcaattttcaaagtttagacccacaatgatttagatcaataggagagtgaatattagatagagtgtttaaaa 52279276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 292
Target Start/End: Complemental strand, 50652470 - 50652376
Alignment:
Q  198 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtg 292  Q
    ||||||||| || |||||||||||| ||  || | ||||||  | ||||||||||||| |||||||  ||||| ||||||| |||||| ||||||    
T  50652470 cttttattgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaagtg 50652376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 11895134 - 11895211
Alignment:
Q  249 tttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattag-agagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||||||||| |||| ||| ||||| | |||| ||| ||| | | |||||||||||||| ||||||    
T  11895134 tttcaaagtgtagacccacaatgatttgaacgaataagagagtgagtaatagaaaaaagtgttcaaaagagagtgttg 11895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 42862563 - 42862494
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt 259  Q
    |||| ||| ||||||||| |||||||||||||||||| || | ||| || || ||| |||||||||||||    
T  42862563 cactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgt 42862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 19933555 - 19933483
Alignment:
Q  253 aaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||  ||||| |||||||| ||||||  |||  |||||| ||||||||||||||| || ||||||    
T  19933555 aaagtgtagactaacaatgatttaaactaataaatgagttggtattaaagagagtgttcaaaatagagtgttg 19933483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 6442188 - 6442330
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| | || ||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| |||    
T  6442188 caacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgatt 6442287  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 317  Q
    ||||||||||||| |||| |||||| ||| |||||||||||||    
T  6442288 taaaccaataaaagagtgagtattaaagatagtgttcaaaaga 6442330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 22189962 - 22190112
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| ||||||||||||||||||||||||||||| || || | |||||| || ||||||||||||||||||||||| |||| |||    
T  22189962 caacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgtagacccgcaatgatt 22190061  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||||  |||| ||||||||||| ||||||||||||| ||||||    
T  22190062 taaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttg 22190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 325
Target Start/End: Original strand, 27949297 - 27949446
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | ||||||| |||||| ||||||||||||||||  |||||||||| |||||||| |  ||||| |||||||||||||||||||||| ||||    
T  27949297 aacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgtagacccacaatgattt 27949396  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||||| | |||| ||||||||||||||||||||||||| ||||||    
T  27949397 aaactaataagagagtgagtattagagagagtgttcaaaagagagtgttg 27949446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 190 - 325
Target Start/End: Original strand, 11824109 - 11824242
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||  | |||||||||||||||||| ||||||||| ||||||| |||||| |||    
T  11824109 cactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatcaataagaaa 11824208  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||| |||||  |||||||||||||||||| ||||||    
T  11824209 gtgagtatt--agagagtgttcaaaagagagtgttg 11824242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 27888308 - 27888455
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 277  Q
    |||||| | ||||||| || || | ||||||| |||||||||||||||| || | |||||| || ||||||||| |||||||||||||||||| ||||||    
T  27888308 cactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaa 27888407  T
Q  278 accaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| | |||| || |||||||||||| ||||||||| ||||||    
T  27888408 accaataagagagtgagtgttagagagagtgctcaaaagagagtgttg 27888455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 325
Target Start/End: Original strand, 46517329 - 46517464
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||| |||||||||| |||||||||||| ||| || ||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||| | |    
T  46517329 cactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaga 46517428  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
     || |||||||||||  |||||||||||| ||||||    
T  46517429 atgagtattagagaggctgttcaaaagagagtgttg 46517464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 11692222 - 11692352
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||||||||||||||||||||||||||| | ||||||  | |||||||||||||||||| || |||| | |||||||| ||||  | |||| |    
T  11692222 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtgag 11692321  T
Q  295 tattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||| ||||||||||||| ||||||    
T  11692322 tattagagagtgtgttcaaaagagagtgttg 11692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 199 - 325
Target Start/End: Complemental strand, 25686968 - 25686842
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    ||||||| ||||||||||||||||||| ||| | ||| |  || |||||||||||||||||||||||||||| |||||||||||||| | | || |||||    
T  25686968 ttttatttgatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtatt 25686869  T
Q  299 agagagagtgttcaaaagagtgtgttg 325  Q
    ||| ||| |||||||||||| ||||||    
T  25686868 agaaagaatgttcaaaagagagtgttg 25686842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 31502609 - 31502511
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||| ||||||||||||||||||||||| |||||||| || |||||||| |  ||||||||||||||||||||| |||||| ||||||||||||||    
T  31502609 taacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaattttcaaagtgtagactcacaatgatttaaaccaataa 31502511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 32205119 - 32205241
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||| |||  | ||||| |||||||| ||||| | |||| |    
T  32205119 actcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttttaaagtataggtctacaatgatttaaactaataagagagtgag 32205218  T
Q  295 tattagagagagtgttcaaaaga 317  Q
    ||||||||||  |||||||||||    
T  32205219 tattagagaggatgttcaaaaga 32205241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 325
Target Start/End: Original strand, 33008142 - 33008274
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||||||||||||||||||||| ||||||||| || | |||||| || ||| |||| ||| ||||||||||||||| |||||||||||||||| |    
T  33008142 cactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataaaaga 33008241  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | | ||||||   |||||||||||||||| ||||||    
T  33008242 gagagtatta---agagtgttcaaaagagagtgttg 33008274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 7775023 - 7775165
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| |||||||||||||||||||||||||||||||| || | |||||| |  ||||||||||||||||| || ||| ||| |||    
T  7775023 caacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaatgatt 7775121  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||| |||||   ||||  ||||||||||||||||||||||||    
T  7775122 taaacaaataagtgagtgaatattagagagagtgttcaaaagag 7775165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 12263573 - 12263458
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||| ||||| ||||||||||||||| |  | ||||||  |  ||||||||||||||||||||||||||| |||||||||||||| | |||| |    
T  12263573 actcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgtagacccacaatgatttaaaccaataagatagtgag 12263474  T
Q  295 tattagagagagtgtt 310  Q
    ||||||||||||||||    
T  12263473 tattagagagagtgtt 12263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 325
Target Start/End: Complemental strand, 6580120 - 6580009
Alignment:
Q  214 tcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaa 313  Q
    ||||||||||||  |||| ||||||  | ||||||||||||| | | |||||||||| |||||||||||||| | |||| ||||||||||||||||||||    
T  6580120 tcaatgtatgtctcactactttgtgtaggttcaattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaa 6580021  T
Q  314 aagagtgtgttg 325  Q
    ||||| ||||||    
T  6580020 aagagagtgttg 6580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 14795178 - 14795300
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||||||||||||||||||| || | ||| ||  | ||||||||| |||||||| | ||| ||| |||||||| ||||| | |||| ||||     
T  14795178 ttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtata 14795277  T
Q  299 agagagagtgttcaaaagagtgt 321  Q
    |||||||||||||||||||||||    
T  14795278 agagagagtgttcaaaagagtgt 14795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 15242170 - 15242292
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||||||||||||||||||| || | ||| ||  | ||||||||| |||||||| | ||| ||| |||||||| ||||| | |||| ||||     
T  15242170 ttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtata 15242269  T
Q  299 agagagagtgttcaaaagagtgt 321  Q
    |||||||||||||||||||||||    
T  15242270 agagagagtgttcaaaagagtgt 15242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 32213004 - 32212877
Alignment:
Q  197 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 296  Q
    |||||||||||||||||||||||||||||  |||| |||||  |  ||||||||| ||| ||||| |||||||| |||||||||||||| | |||| |||    
T  32213004 tcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagta 32212906  T
Q  297 ttagagagagtgttcaaaagagtgtgttg 325  Q
    ||| | || ||||||||||||| ||||||    
T  32212905 ttatatagggtgttcaaaagagagtgttg 32212877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 25092798 - 25092704
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    ||||||| ||| |||| |||||||||||||||||||| |||||| |  |||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  25092798 actctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttctaagtatagacacacaataatttaaaccaataaaaaa 25092704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 44350891 - 44350809
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||| |||| ||||||||||  ||||||||||||| ||||||    
T  44350891 ttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttg 44350809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 27320465 - 27320540
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||| ||||||||||||||||||||||||||  ||||| |||||| ||| |||||||||| ||||||||||    
T  27320465 ttcaatttttaaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagtattcaaaagag 27320540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 32605355 - 32605457
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||||||  | || |||||| |||||||||||| ||||||||| | |||||| |||    
T  32605355 caacactctttttagcactcattcttttat-ggatgaaatcaatgtatgtctcattactttgtgtggattcaatttttaaagtgtaggctcacaatgatt 32605453  T
Q  275 taaa 278  Q
    ||||    
T  32605454 taaa 32605457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 316
Target Start/End: Complemental strand, 19422991 - 19422850
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| ||||||| |||||||||||||||||||||||| ||    ||||   |   | |||||| ||||||||| ||||||| |||    
T  19422991 caacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactattttcgaagtgtagatccacaatgatt 19422892  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaag 316  Q
    ||||||||||||| |||| |||| ||||| ||||||||||||    
T  19422891 taaaccaataaaagagtgagtatcagagatagtgttcaaaag 19422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 325
Target Start/End: Complemental strand, 24539278 - 24539129
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 275  Q
    ||||||| | ||||||| ||||||||||||||| |||||||| ||||||| || | ||| |  |||||| |||| |||| |||| |||||||| | ||||    
T  24539278 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgattt 24539179  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    || ||||| | | |||| || ||||||||||||| |||||||| ||||||    
T  24539178 aacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttg 24539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 39254121 - 39254249
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||||||||||| || |||| |||||||||   || | ||||||  | ||||||||| ||| |||||||||||||| ||||||| |||||| | |    
T  39254121 cactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaatgtagacccacaataatttaaatcaataagaga 39254220  T
Q  290 gtgtgtattagagagagtgttcaaaagag 318  Q
    ||| || ||| ||||||||||||||||||    
T  39254221 gtgagtgttaaagagagtgttcaaaagag 39254249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 36845658 - 36845569
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||||||||| ||||||||||| ||| ||  || | |||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  36845658 actcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaattttcaaagtatagacccacaatgatttaaaccaataa 36845569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 48374524 - 48374446
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||||||||| || |||||| ||||||||||| || | |||| ||||||||||||||||||||||||| ||||||    
T  48374524 atttccaaagtgtatactcacaataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttg 48374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 17749719 - 17749868
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 275  Q
    ||||||| | ||||||| ||||||||||||||| |||||||| ||||||| || | ||| |  |||||  |||| |||| |||| |||||||| | ||||    
T  17749719 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgattt 17749818  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    || ||||| | | |||| || ||||||||||||| |||||||| ||||||    
T  17749819 aacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttg 17749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 7459435 - 7459505
Alignment:
Q  244 tcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaa 314  Q
    |||||||||||| | |||| ||||||| |||||||||||||||| |||| |||||| ||||||| ||||||    
T  7459435 tcaattttcaaaatatagatccacaataatttaaaccaataaaagagtgagtattaaagagagtattcaaa 7459505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 25428633 - 25428485
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga-cccacaattattta 276  Q
    |||||||||||  ||| ||||||||||||  |||||||||||||||||| || | ||| || || ||  |||| ||||||||||| || ||| | ||||     
T  25428633 cactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttccaaagtgtagatcctacattgatttt 25428534  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | ||||||||| |||| ||  || |||||||| ||||||||| ||||||    
T  25428533 atccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttg 25428485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 17354681 - 17354598
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 261  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||||| || | ||| || || ||| |||| ||||||||||    
T  17354681 cactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaagtgtag 17354598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 19494476 - 19494409
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    ||||||||||||| |||||||||||||||||| || | ||| || || ||| ||||||||||||||||    
T  19494476 actcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaga 19494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 325
Target Start/End: Complemental strand, 19841057 - 19840891
Alignment:
Q  162 tgaggaatattagcaacactct--ttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt 259  Q
    ||||||||  ||||||||||||  ||||| || | ||||||||||||| ||||||||||||||||| ||| | ||| || || ||| |||| ||||||||    
T  19841057 tgaggaatgctagcaacactctctttttagcattcactcttttattggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgt 19840958  T
Q  260 a-gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | | || | | | |||| | ||||||||| |||| ||  ||||||||||| |||||| || ||||||    
T  19840957 aggtcctatattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttg 19840891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 32178945 - 32178823
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||||||| |||||||||||||||| ||||||||| | || | | |||    ||||||||||||||||||| || |||||| ||||||| |||||| | |    
T  32178945 cacttactattttattggatgaaattaatgtatgttccaccactctgtttt-attcaattttcaaagtgtatacacacaatgatttaaatcaataagaga 32178847  T
Q  290 gtgtgtattagagagagtgttcaa 313  Q
    |||  ||| ||||||| |||||||    
T  32178846 gtgattatcagagagattgttcaa 32178823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 325
Target Start/End: Original strand, 45909503 - 45909630
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataaaaaagtgtgtat 297  Q
    ||||||||| |||||||||||||||||| || | ||| || || ||| |||| |||| |||||  || ||| | |||| | ||||||||| |||| || |    
T  45909503 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgt 45909602  T
Q  298 tagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||| |||||||||| ||||||    
T  45909603 tagagagagtattcaaaagagagtgttg 45909630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 46994448 - 46994369
Alignment:
Q  247 attttcaaagtgt-agacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| |||||||| |||||||| || |||||| |||||||||||||| || |||||||||| ||| ||||||| ||||||    
T  46994448 atttccaaagtgtgagacccaccatgatttaagccaataaaaaagtgagtgttagagagagcgttaaaaagagagtgttg 46994369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 12167315 - 12167365
Alignment:
Q  260 agacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||||||| |||||||||||||| |||||| |||||| ||||||||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgtt 12167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 13919828 - 13919954
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||| |||||||||||||||||| || | ||| || || ||| |||||||||||||| | || ||| | |||| | ||||||||  |||| ||  |    
T  13919828 tttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagtgct 13919927  T
Q  299 agagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||| ||||||||| ||||||    
T  13919928 agagagagtgctcaaaagagagtgttg 13919954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 45206084 - 45206042
Alignment:
Q  183 tttttaacacttactcttttattggatgaaatcaatgtatgtc 225  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  45206084 tttttaacacttactctttcatcggatgaaatcaatgtatgtc 45206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 42274705 - 42274656
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtc 225  Q
    |||||||| ||| ||| ||||||||||||| |||||||||||||||||||    
T  42274705 aacactctatttgacagttactcttttatttgatgaaatcaatgtatgtc 42274656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 26703582 - 26703446
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 288  Q
    |||| ||||||||||||| |||||||||||||||||  || | ||| || || ||| ||||  |||||||| | || ||| |||||| | |||||||||     
T  26703582 cactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccatttctaaagtgtaggtcctacatttatttcacccaataaaag 26703483  T
Q  289 agtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||  ||||||||||| ||| ||||| ||||||    
T  26703482 agtgagtgctagagagagtgctcagaagagagtgttg 26703446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 28713049 - 28713089
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtc 225  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  28713049 tttaacacttactcttttattgaatgaaatcaatatatgtc 28713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 12271029 - 12271095
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    ||||||||||  |||||||||||||||||||| || | |||||| || ||| ||||||||||||||||    
T  12271029 actcttttatcagatgaaatcaatgtatgtcccaccactttgtgtgg-ttctattttcaaagtgtaga 12271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 7774944 - 7775009
Alignment:
Q  251 tcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 317  Q
    ||||||||| |||| ||||| |||||||||||||| | |||   |||||||||||||||||||||||    
T  7774944 tcaaagtgtggacc-acaatgatttaaaccaataagagagtaaatattagagagagtgttcaaaaga 7775009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 44511093 - 44511043
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtc 225  Q
    ||||||||| | || |||| ||| |||||||||||||||||||||||||||    
T  44511093 caacactctctctagcactcacttttttattggatgaaatcaatgtatgtc 44511043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 2911882 - 2911927
Alignment:
Q  272 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 317  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  2911882 atttaagccaataaaaaagtgagtattggagagagtgttgaaaaga 2911927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 10934100 - 10933979
Alignment:
Q  197 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 296  Q
    ||||||||||||| |||| ||| ||||||  || | |||||  || ||| |||| |||||| || ||||||||| |||||||| ||||| | | || |||    
T  10934100 tcttttattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaacccacaatgatttaaactaataagagattgagta 10934001  T
Q  297 ttagagagagtgttcaaaagag 318  Q
    ||| | |||| |||||||||||    
T  10934000 ttaaaaagagcgttcaaaagag 10933979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 20954800 - 20954853
Alignment:
Q  272 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||| |||||||||||||| || || ||||||||||| ||||||| ||||||    
T  20954800 atttaagccaataaaaaagtgagtgtttgagagagtgttgaaaagagagtgttg 20954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 31874069 - 31874110
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctacta 231  Q
    |||| ||| |||||||||||||||||||||||||||| ||||    
T  31874069 cactcacttttttattggatgaaatcaatgtatgtccaacta 31874110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 31874117 - 31874174
Alignment:
Q  253 aaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||||||| |||||| ||||||||| |||| | |||| ||||| |||||||||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgtt 31874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 38065386 - 38065333
Alignment:
Q  272 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||| |||||| ||||| ||||||||||| || |||| ||||||    
T  38065386 atttaaaccaataagaaagtgagtatttgagagagtgttgaagagagagtgttg 38065333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 3855899 - 3855855
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    |||||||||||||||  ||||| ||||| ||||||||||||||||    
T  3855899 ttcaattttcaaagttcagacctacaatgatttaaaccaataaaa 3855855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 4090134 - 4090086
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatg 223  Q
    ||||| ||| ||||||||||| | |||||||||||||||||||| ||||    
T  4090134 caacattctctttaacacttatttttttattggatgaaatcaatctatg 4090086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 8073430 - 8073394
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcc 226  Q
    |||| |||||||||| |||||||||||||||||||||    
T  8073430 cactcactcttttatcggatgaaatcaatgtatgtcc 8073394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 9111490 - 9111406
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 260  Q
    |||||||| |||| || | ||||||||||| |||||||||||| ||| |||||| | ||| |  |||||||||||| ||| ||||    
T  9111490 aacactctatttagcattcactcttttattagatgaaatcaatctatatcctaccactttatttggattcaatttttaaaatgta 9111406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 30742615 - 30742547
Alignment:
Q  257 tgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| ||||| ||||||| |||||| ||| ||  |||||||| |||||||||||| || ||||||    
T  30742615 tgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgttcaaaatagagtgttg 30742547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 36845566 - 36845498
Alignment:
Q  257 tgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||| |||||||||||||| | ||||  ||||  ||||||| ||||||| || ||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagtattcaaaatagagtgttg 36845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 41508425 - 41508385
Alignment:
Q  182 ctttttaacacttactcttttattggatgaaatcaatgtat 222  Q
    ||||||| |||| ||| ||||||||||||||||||||||||    
T  41508425 ctttttagcactcacttttttattggatgaaatcaatgtat 41508385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 161 - 325
Target Start/End: Complemental strand, 41105741 - 41105577
Alignment:
Q  161 atgaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 260  Q
    |||||||||  |||||||||||| | ||| ||||||||||||||||||||||||||| | |||||| |||| |||||| || |||||||||||||||| |    
T  41105741 atgaggaatgctagcaacactctctataaaacttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgca 41105642  T
Q  261 gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
     ||||||| | |||||||||||||| | || | ||||||||||||||| ||||||||| ||||||    
T  41105641 tacccacagtgatttaaaccaataagagagcgagtattagagagagtgctcaaaagagagtgttg 41105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 5413874 - 5413741
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||||||||||||||||||||||| || | |||||| || |||||||| ||||||||||||||| ||| ||||||||||||||||||||| |    
T  5413874 actcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaagtgag 5413775  T
Q  295 tatta---gagagagtgttcaaaagagtgtgttg 325  Q
    |||||    |||||||||||||||||| ||||||    
T  5413774 tattatagtagagagtgttcaaaagagagtgttg 5413741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 325
Target Start/End: Complemental strand, 28490855 - 28490729
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    ||||||||||||||||||| |||||||| || | ||||||    ||||||||| |||||||||||||||||| |||||||||||||| | |||| |||||    
T  28490855 ttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 28490756  T
Q  299 agagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||||||| ||||||    
T  28490755 agagagagtgttcaaaagagagtgttg 28490729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 318
Target Start/End: Complemental strand, 34384838 - 34384705
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 284  Q
    ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||| |  ||||||||||||| | ||||| |||||| ||||| ||| |||    
T  34384838 tttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgata 34384739  T
Q  285 aaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||| |||| |||||| ||||||||||||||||||    
T  34384738 aaagagtgagtattaaagagagtgttcaaaagag 34384705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 28223923 - 28223783
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 284  Q
    ||||||||||| |||||||||| ||||||| | ||||||| |  | |||||||| ||  |||||||||||||| |||||||| ||| |||||||||||||    
T  28223923 tttaacacttattcttttattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttcaaagtatagacccataatgatttaaaccaata 28223824  T
Q  285 aaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||| |||| |||||||||||  |||||||||||| ||||||    
T  28223823 aaagagtgagtattagagaggatgttcaaaagagggtgttg 28223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 323
Target Start/End: Complemental strand, 30326029 - 30325883
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||  || | ||| || |  ||| || | ||||||||||| || |||| |||||    
T  30326029 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgattta 30325930  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgt 323  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  30325929 aaccaataagaaagtgagtattagagagagtgttcaaaagagagtgt 30325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 327
Target Start/End: Complemental strand, 36338047 - 36337892
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    |||||||| ||||| |||| | | ||||||| |||||||| ||||||||||| |  ||||||||    |||||||| ||||||||||||||||||| |||    
T  36338047 caacactcattttagcactcattattttatttgatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatgatt 36337948  T
Q  275 taaaccaataaaaaagt---gtgtattagagagagtgttcaaaagagtgtgttgat 327  Q
    |||||||||||||||     ||||||||||||||||||||||||||  ||||||||    
T  36337947 taaaccaataaaaaaaataagtgtattagagagagtgttcaaaagatagtgttgat 36337892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 10142118 - 10141998
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| ||||||||||||||| |||||||||||||||| || | ||||||  | ||| |||||||||||||||||| ||||||||||||| |||||| | |    
T  10142118 cactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtagaccaacaattatttaaatcaataagaga 10142019  T
Q  290 gtgtgtattagagagagtgtt 310  Q
    ||| || ||||||||||||||    
T  10142018 gtgagtgttagagagagtgtt 10141998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 310
Target Start/End: Complemental strand, 25710642 - 25710494
Alignment:
Q  162 tgaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 261  Q
    ||||||||  |||||||||||| |||| |||| ||||||||||||  ||||||||||||||||||||| | || ||  |  ||| |||||||||||||||    
T  25710642 tgaggaatgctagcaacactctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtag 25710543  T
Q  262 acccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||||| |||||||||||||| | | ||  ||||| ||||||||||    
T  25710542 acccacaataatttaaaccaataagagaatgaatattaaagagagtgtt 25710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 163 - 304
Target Start/End: Complemental strand, 28434985 - 28434846
Alignment:
Q  163 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    |||||||  |||||||||||| | ||||||| | ||||||||||||| |||||||| ||||||| || | | ||| ||  ||||||||||||||| ||||    
T  28434985 gaggaatgctagcaacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccactgtgttgg--ttcaattttcaaagtttaga 28434888  T
Q  263 cccacaattatttaaaccaataaaaaagtgtgtattagagag 304  Q
    |||||||| |||||||||||||| ||| || |||||||||||    
T  28434887 cccacaatgatttaaaccaataagaaaatgagtattagagag 28434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 34368395 - 34368533
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||||| ||||||| ||||||| ||| |||||||||| | || | |||||| || |||| ||||||||||||||||||||||| ||||||||||||||     
T  34368395 taacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataag 34368494  T
Q  287 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | |||| ||   |||||||||| ||||||||| ||||||    
T  34368495 agagtgggtgacagagagagtgctcaaaagagagtgttg 34368533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 41330530 - 41330404
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt- 293  Q
    ||||||||||| |||||||| ||||||||||| |  | ||||||  | ||||||||||||||||||||| |||||| |||||||||||||| ||| |||     
T  41330530 actcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaa-tgta 41330432  T
Q  294 gtattagagagagtgttcaaaagagtgt 321  Q
    |||||| |||| ||||||||||||||||    
T  41330431 gtattaaagagtgtgttcaaaagagtgt 41330404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 37455392 - 37455525
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||| |||||| ||| |||||||||||||| | || ||||||||||| ||||||||||||||||||||| |||||| ||| |||||||||| | |||| |    
T  37455392 actcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaataatt-aaaccaataagagagtgag 37455490  T
Q  295 tattagagagag----tgttcaaaagagtgtgttg 325  Q
    |||||||||| |    |||||||||||| ||||||    
T  37455491 tattagagagggagggtgttcaaaagagagtgttg 37455525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 318
Target Start/End: Original strand, 25919266 - 25919377
Alignment:
Q  207 gatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagag 306  Q
    |||||||||||| ||||||  || |||||||| ||  |||||||||||||||||||| |||||| |||||||||||||||||| ||  ||||| ||| ||    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataaaaaaatgaatattaaagaaag 25919365  T
Q  307 tgttcaaaagag 318  Q
    | ||||||||||    
T  25919366 tattcaaaagag 25919377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 10950109 - 10950219
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| |||  |||||||||||| |||| ||||||||||||||||||| || |||||||  |||||| ||||||||||| ||||| || ||| |||    
T  10950109 caacactctctttctcacttactctttcattgaatgaaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatt 10950208  T
Q  275 taaaccaataa 285  Q
    ||||| |||||    
T  10950209 taaactaataa 10950219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 25630830 - 25630947
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| ||||||| ||||| |||||||  || |||| ||||||| ||| ||||||||||   | ||||||||||||||||||||||||| || |||    
T  25630830 caacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttcaaagtgtagacccacgatgatt 25630929  T
Q  275 taaaccaataaaaaagtg 292  Q
    ||||||||| | ||||||    
T  25630930 taaaccaattagaaagtg 25630947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 327
Target Start/End: Complemental strand, 27592607 - 27592457
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||  || | ||| || |  ||| |||| ||||||||||| |  |||| |||||    
T  27592607 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgattta 27592508  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 327  Q
    ||||||||| | |||| |||   |||||||| |||||||||| ||||||||    
T  27592507 aaccaataagagagtgggtacaggagagagtattcaaaagagagtgttgat 27592457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 286
Target Start/End: Complemental strand, 31885963 - 31885877
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    |||||||||||||| ||||| |||||| || ||||| ||| | |||||||||||||||||||| | ||||| |||||||||||||||    
T  31885963 tttattggatgaaaacaatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaaccaataaa 31885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 4714777 - 4714922
Alignment:
Q  180 ctctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaac 279  Q
    |||||||||||| | ||| ||||||||||| |||| | ||| ||||| |  |||||||| || ||| ||||||||| ||||||  |||||| ||||| ||    
T  4714777 ctctttttaacattcacttttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagatacacaatgatttatac 4714876  T
Q  280 caataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| ||    ||||||||||| |||||||||||| ||||||    
T  4714877 caataaaagagaacatattagagagaatgttcaaaagagagtgttg 4714922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 39246657 - 39246741
Alignment:
Q  201 ttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||||| |||||||||||||||| || | |||||| |  |||| |||||||||||||||||||||||  |||||||||||||    
T  39246657 ttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaaccaataa 39246741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 310
Target Start/End: Complemental strand, 17537259 - 17537124
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| ||||||||||| ||| |||||||||||||||| || | ||| ||  | || ||||||||||||||||| ||| ||| |||    
T  17537259 caacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgatt 17537160  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||||||| | ||||  ||| ||||||| ||||    
T  17537159 taaaccaataagagagtgaatataagagagattgtt 17537124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 14553573 - 14553665
Alignment:
Q  213 atcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagaga 305  Q
    ||||||||||||||||| |||||  |  | ||||||||| |||||||||||||||||| | ||||||||| || | |||| ||||||||||||    
T  14553573 atcaatgtatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagaga 14553665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 17434983 - 17434857
Alignment:
Q  198 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtat 297  Q
    |||||||||||| |||  ||| ||||| ||||||||||||  |  ||| ||||  |||||||||||||||| | |||||||||||||||| ||||   ||    
T  17434983 cttttattggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgtagacccacattgatttaaaccaataaaagagtgaacat 17434884  T
Q  298 tagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| |||| ||||||| ||||||    
T  17434883 tagagaga-tgtttaaaagagagtgttg 17434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 28611863 - 28611785
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||| ||||||||||| |||||| ||||||| |||||||| |||  || |||||||||||| ||||||||| ||||||    
T  28611863 atttttaaagtgtagacgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttg 28611785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 28155842 - 28155769
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagac 263  Q
    ||||||||||||||||| ||||||||||||||||| | || ||||| |  || || ||||||||||||||||||    
T  28155842 cacttactcttttattgaatgaaatcaatgtatgttcaaccattttttatgggtttaattttcaaagtgtagac 28155769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 28090371 - 28090251
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||||||| || ||||  |||||||||||  |||||| || | |||||| |  ||||||||||||||| |||| | ||||| |||||||||||||||| |    
T  28090371 cacttactattatattatatgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatgatttaaaccaataaaaga 28090272  T
Q  290 gtgtgtattagagagagtgtt 310  Q
    |||  ||||| | ||||||||    
T  28090271 gtgaatattacatagagtgtt 28090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 13456302 - 13456236
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 261  Q
    |||||||||| ||||||||||||||||| ||| || ||||| || || ||| |||||||||||||||    
T  13456302 actcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccattttcaaagtgtag 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 34480079 - 34480005
Alignment:
Q  204 ttggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 278  Q
    ||||||||||||||| ||| ||  || |||||||| | |||||||||| |||||| ||||||||||| |||||||    
T  34480079 ttggatgaaatcaatatatatctcaccattttgtgtgaattcaatttttaaagtgcagacccacaataatttaaa 34480005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 24990906 - 24990994
Alignment:
Q  172 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 260  Q
    |||||||| |||||| ||||||  |||||||||||| |||||||||| ||||||| || | ||| ||  | ||| ||||||||||||||    
T  24990906 tagcaacaatcttttgaacactcgctcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgta 24990994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 4427336 - 4427379
Alignment:
Q  246 aattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||||||||||||||||| |||||| |||||||| |||||||||    
T  4427336 aattttcaaagtgtagactcacaatgatttaaacaaataaaaaa 4427379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 318
Target Start/End: Original strand, 2935449 - 2935495
Alignment:
Q  272 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||||||||||||| |||| |||||||||| | ||||||||||||    
T  2935449 atttaaaccaataaaagagtgagtattagagaaattgttcaaaagag 2935495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 4959333 - 4959287
Alignment:
Q  279 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||| |||| ||||||||||||||| ||||||||| ||||||    
T  4959333 ccaataaaagagtgggtattagagagagtgctcaaaagagagtgttg 4959287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 43541874 - 43541924
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtc 225  Q
    ||||||||| ||||| |||| ||||||||||| || |||||||||||||||    
T  43541874 caacactctctttaatacttcctcttttattgaataaaatcaatgtatgtc 43541924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 25002091 - 25002014
Alignment:
Q  247 attttcaaagtgt-agacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgt 323  Q
    |||| |||||||| |||||||| || |||||||||||| | |||||| || || ||||||||||| ||||||| ||||    
T  25002091 atttccaaagtgtgagacccactatgatttaaaccaattagaaagtgagtgttggagagagtgttgaaaagagagtgt 25002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 24915075 - 24915163
Alignment:
Q  172 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 260  Q
    |||||||| |||||| | ||||  |||||||||| | |||||||||| ||||||| || | ||| || || ||| ||||||||||||||    
T  24915075 tagcaacaatcttttgagcactcgctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgta 24915163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 42224733 - 42224597
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 288  Q
    |||| ||||||||||| | |||||||||||||||||| || | ||| || || ||| |||| ||||||||| | || ||| | |||| | |||||||||     
T  42224733 cactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaag 42224634  T
Q  289 agtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||  | ||||||||  ||||||||| ||||||    
T  42224633 agtgagtgctggagagagttctcaaaagagagtgttg 42224597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 6e-38; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 166 - 310
Target Start/End: Original strand, 29673489 - 29673633
Alignment:
Q  166 gaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc 265  Q
    ||||| |||||||||||| | ||||||| | | ||||||||||| |||||||| ||||||| || ||||||||  | |||||||||||||||||||| |     
T  29673489 gaatactagcaacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaact 29673588  T
Q  266 acaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  29673589 acaattatttaaaccaataaaaaagtgagtattagagagagtgtt 29673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 41958121 - 41958241
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| | |||||||||||||| | |    
T  41958121 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgtagacccacagtgatttaaaccaataagaga 41958220  T
Q  290 gtgtgtattagagagagtgtt 310  Q
    ||| |||||||| ||||||||    
T  41958221 gtgagtattagaaagagtgtt 41958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 33193098 - 33193212
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 299  Q
    ||||||||||||||||||||||||| | || |||||||| || |||||||||||||||||||||||||||| |||||||||||||| | | || ||||||    
T  33193098 tttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtatta 33193197  T
Q  300 gagagagtgttcaaa 314  Q
    |||| ||||||||||    
T  33193198 gagaaagtgttcaaa 33193212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 177 - 318
Target Start/End: Complemental strand, 19101756 - 19101615
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||||||||||||||| |  |||| |||||    
T  19101756 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgattta 19101657  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  19101656 aaccaataagaaagtgagtattagagagagtgttcaaaagag 19101615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 199 - 325
Target Start/End: Complemental strand, 8741356 - 8741230
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||||||||||||||||||  |||| |||||| || ||||||||||||||| || || |||||| |||||||| ||||| | |||| |||||    
T  8741356 ttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagtataaacacacaatgatttaaactaataagagagtgagtatt 8741257  T
Q  299 agagagagtgttcaaaagagtgtgttg 325  Q
    ||||| | |||||||||||| ||||||    
T  8741256 agagaaattgttcaaaagagagtgttg 8741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 26980419 - 26980269
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | ||| ||| ||||| |||||||||||||||||||||||||| || |||||||| |  ||||||||||||| | || | ||||||| |||    
T  26980419 caacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatatacatccacaatgatt 26980320  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| |||||| | |||| |||||| |||||||||| ||||||| ||||||    
T  26980319 taaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttg 26980269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 318
Target Start/End: Complemental strand, 41948302 - 41948160
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||| ||| ||| ||| ||||||||||||||| |||||||||||| | |||| | ||||||  | |||||||||||||||||| | ||||||| ||||    
T  41948302 aacactatttctaatactcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgattt 41948203  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||| |||||| | |||| || ||||||||||||||||||||||    
T  41948202 aaatcaataagagagtgagtgttagagagagtgttcaaaagag 41948160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 44271942 - 44272076
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| |||| |||||||| |||||||| ||||||||||||||||| | || ||||| ||  | |||||||||||||||||||| | ||||| ||||    
T  44271942 aacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgtagaacaacaatgattt 44272041  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||| |||||||||| || |||||||| ||||||||    
T  44272042 aaatcaataaaaaaatgagtattagaaagagtgtt 44272076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 28218185 - 28218053
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||||||||||||||||||||||  || | |||||| ||||||||||||||||||||||| ||||| | |||||||  ||||| | |||| |    
T  28218185 actcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgtagaaccacagtaatttaaattaataagatagtgag 28218086  T
Q  295 tattaga--gagagtgttcaaaagagtgtgttg 325  Q
    |||||||  | ||||||||||||||| ||||||    
T  28218085 tattagagcgggagtgttcaaaagagagtgttg 28218053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 325
Target Start/End: Complemental strand, 32211944 - 32211791
Alignment:
Q  172 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaatt 271  Q
    |||||||||||| |  | |||| ||||||||||| |||||||||||||||||||| |||| |||||| |  ||||||||| || |||||||||||||||     
T  32211944 tagcaacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatg 32211845  T
Q  272 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||| | ||||   |||| ||| |||||| ||||||| ||||||    
T  32211844 atttaaaccaataagagagtgatcattaaagaaagtgttgaaaagagagtgttg 32211791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 6133758 - 6133632
Alignment:
Q  198 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtat 297  Q
    ||||||||||||||||||||| ||||||| || || ||||| || ||||||||||||||| || ||||||||| | |||||||||||| | |||| ||||    
T  6133758 cttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaattttcaaagtctacacccacaatga-ttaaaccaataagagagtgagtat 6133660  T
Q  298 tagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||  |||||||||||| ||||||    
T  6133659 tagagaggatgttcaaaagagagtgttg 6133632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 8899049 - 8899180
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    |||||||| || ||| ||| |||||||| || |||||||| ||   |||||| || |||||||||||||||||||  ||||||| ||||||||||||||     
T  8899049 taacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgtaggtccacaataatttaaaccaataag 8899148  T
Q  287 aaagtgtgtattagagagagtgttcaaaagag 318  Q
    | |||| |||||||||||||||||||||||||    
T  8899149 agagtgagtattagagagagtgttcaaaagag 8899180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 10659901 - 10659784
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||| |||||||||||||| |||||| || | ||||||  | ||||||||||||||||||||||||| || |||||||||||||| | |||| |||||    
T  10659901 ttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtagacccacgatgatttaaaccaataagagagtg-gtatt 10659803  T
Q  299 agagagagtgttcaaaaga 317  Q
    ||||| |||||||||||||    
T  10659802 agagaaagtgttcaaaaga 10659784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 11987649 - 11987799
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| |  |||| ||| || ||||||||||||||| ||||||||| | || | || ||| || |||||||||||||||||||||||||||| |||    
T  11987649 caacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgtagacccacaatgatt 11987748  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||| ||| | ||||  ||||||| |||||||| ||||||| ||||||    
T  11987749 taaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttg 11987799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 30679048 - 30678918
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||| | ||||| |||||||||||||||| || | |||||| || ||||||||||||||||||||| |||||| |||||| ||||||| | |||| |    
T  30679048 actctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtgag 30678949  T
Q  295 tattagagagagtgttcaaaagagtgtgttg 325  Q
    | |||||||||||| |||||| || ||||||    
T  30678948 tgttagagagagtgctcaaaaaagagtgttg 30678918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 2225267 - 2225396
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||||||||||||||||||||||| || | |||||| || |||  ||| ||||||||||||| ||| | |||||||||||||| |||||| |    
T  2225267 actcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgtagaccgacagtgatttaaaccaataagaaagtgag 2225366  T
Q  295 tattagagagagtgttcaaaagagtgtgtt 324  Q
    ||| | | || ||||||||||||| |||||    
T  2225367 tatcacaaagcgtgttcaaaagagagtgtt 2225396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 283
Target Start/End: Original strand, 49730887 - 49730995
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | ||||||| ||||||||||| ||| |||  ||| ||||||  |||| |||||| || |||||||||||||||||||||||||||| |||    
T  49730887 caacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatgatt 49730986  T
Q  275 taaaccaat 283  Q
    |||||||||    
T  49730987 taaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 188 - 318
Target Start/End: Original strand, 15468256 - 15468386
Alignment:
Q  188 aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    |||||| |||||||||||  ||  ||||||||||||||  | || |||||| || ||||||||||| |||||||||||||||| |||||||  |||||||    
T  15468256 aacactcactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaa 15468355  T
Q  288 aagtgtgtattagagagagtgttcaaaagag 318  Q
     |||  ||||| |||| ||||||||||||||    
T  15468356 gagtaagtatttgagatagtgttcaaaagag 15468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 31866361 - 31866470
Alignment:
Q  197 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 296  Q
    |||||| ||||||||||||||||||||||| |||||||| ||  | ||||||||| |||||||| | ||||||| |||||||| ||||| |||||| |||    
T  31866361 tcttttgttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagta 31866459  T
Q  297 ttagagagagt 307  Q
    ||| |||||||    
T  31866460 ttaaagagagt 31866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 25543364 - 25543511
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtg--gggattcaattttcaaagtgtagacccacaattat 273  Q
    |||||||| | ||||||||||||||||||| |||||||||||| ||||||| || | ||||||  || ||   |||  ||| ||| || | |||||| ||    
T  25543364 aacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgtaggtat---attcccaatgtgcagcctcacaatgat 25543460  T
Q  274 ttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgtt 324  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| |||||    
T  25543461 ttaaaccaataagatagtgagtattagagagagtgttcaaaagagagtgtt 25543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 15523235 - 15523372
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| ||||  |||||||||| || |||| |||||    
T  15523235 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgattta 15523334  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||||||    ||  |||||||||||||||||||||||||    
T  15523335 aaccaataa----gttagtattagagagagtgttcaaaagag 15523372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 15531229 - 15531366
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| ||||  |||||||||| || |||| |||||    
T  15531229 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgattta 15531328  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||||||    ||  |||||||||||||||||||||||||    
T  15531329 aaccaataa----gttagtattagagagagtgttcaaaagag 15531366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 22540393 - 22540530
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||| ||||||||||| || |||| |||||    
T  22540393 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 22540492  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||||||    ||  |||||| ||||||||||||||||||    
T  22540493 aaccaataa----gttagtattaaagagagtgttcaaaagag 22540530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 316
Target Start/End: Original strand, 33114030 - 33114135
Alignment:
Q  211 aaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    |||||| ||||||||| || ||||| ||  | |||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||  || ||||||||||    
T  33114030 aaatcattgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtt 33114129  T
Q  311 caaaag 316  Q
     |||||    
T  33114130 taaaag 33114135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 310
Target Start/End: Original strand, 931417 - 931532
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    |||||||||||| ||| || |||||||||||| |  ||||| || || ||||||||||||| | || ||||||||| |||||||||||||||| ||||      
T  931417 actcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaattttcaaaatatacacccacaatgatttaaaccaataaaagagtgaa 931516  T
Q  295 tattagagagagtgtt 310  Q
    ||||||| | ||||||    
T  931517 tattagaaaaagtgtt 931532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 15928598 - 15928726
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||| |||| |||  |||||||||  || |||||||| |  ||| |||||||| ||||||||  ||| | |||||||||||||||| |||| |    
T  15928598 actcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaaccaataaaagagtgag 15928697  T
Q  295 tattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||  |||||||||||||||||| ||||||    
T  15928698 tatt--agagagtgttcaaaagagagtgttg 15928726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 50539141 - 50539259
Alignment:
Q  171 ttagcaacactcttttt--aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccaca 268  Q
    |||||||||||| ||||  |||||| ||||||||||||||||||||||| |||||| | || | ||| || || ||||||||||  ||||||||| | ||    
T  50539141 ttagcaacactcatttttcaacactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgca 50539240  T
Q  269 attatttaaaccaataaaa 287  Q
    || |||||||| |||||||    
T  50539241 atgatttaaactaataaaa 50539259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 318
Target Start/End: Original strand, 36566929 - 36567056
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 284  Q
    ||||||||||||| |||||||||||||||||||||||||||  |  | ||| |  || ||| |||||||||||||||| ||| |||||||      ||||    
T  36566929 tttaacacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgtagatccagaattatt------aata 36567022  T
Q  285 aaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    | | |||| ||||||||||| |||||||||||||    
T  36567023 atagagtgagtattagagagtgtgttcaaaagag 36567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 308
Target Start/End: Complemental strand, 45179378 - 45179270
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 299  Q
    ||||||| || |||||||||||||| | |  | |||||| || |||||||||||||||||| ||||||||| | |||||  ||||| ||| || ||||||    
T  45179378 tttattgaataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataagaaaatgagtatta 45179279  T
Q  300 gagagagtg 308  Q
    |||||||||    
T  45179278 gagagagtg 45179270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 303
Target Start/End: Original strand, 51732324 - 51732428
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    ||||||| |||||||| ||||||| | | |||| ||| || |  || |||||||||||| || ||||||||| |||||||||||||||| |||| |||||    
T  51732324 ttttatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataaacccacaataatttaaaccaataaaagagtgagtatt 51732423  T
Q  299 agaga 303  Q
    |||||    
T  51732424 agaga 51732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 12767413 - 12767342
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||| ||||||||||| || ||| |||||||||||||||| |||| ||||||||||| || ||||||||||    
T  12767413 atttttaaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagagggttttcaaaagag 12767342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 41918033 - 41918104
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 261  Q
    |||| ||||||||||||| |||||||||||||||||| || | ||| || |||||| |||||||||||||||    
T  41918033 cactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttcaaagtgtag 41918104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 318
Target Start/End: Original strand, 27570249 - 27570391
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | | ||||| | ||||||||||| |||||| ||  ||||||| || | |||||| |  || |||||| |||||||| ||||||||| ||||    
T  27570249 aacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaacccacaatgattt 27570348  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
     ||| ||||| ||||||  | | ||||||||||||||||||||    
T  27570349 gaactaataagaaagtgaatttgagagagagtgttcaaaagag 27570391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 29673678 - 29673732
Alignment:
Q  256 gtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    ||||||| | |||||||||||||||||||||||||||  ||||||||||||||||    
T  29673678 gtgtagaactacaattatttaaaccaataaaaaagtgaatattagagagagtgtt 29673732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 325
Target Start/End: Complemental strand, 32848739 - 32848589
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatt 274  Q
    |||||||| | || |||| ||||||||||||| |||||||| ||||||||| || | ||| || |||||| |||||||||||||||  || ||| | | |    
T  32848739 aacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccattttcaaagtgtaggtcctacattgaat 32848640  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | ||||||||||| |||  ||  |||||| |||| ||||||||| ||||||    
T  32848639 tcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttg 32848589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 325
Target Start/End: Complemental strand, 13114825 - 13114676
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 275  Q
    ||||||| | ||||||| ||||||||||| ||| |||||||| ||||||| || | ||| |  |||||| |||| |||| ||||  ||||||| | ||||    
T  13114825 acactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgattt 13114726  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    || ||||| | | |||| || ||||||||||||| |||||||| ||||||    
T  13114725 aacccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttg 13114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 300
Target Start/End: Original strand, 31074751 - 31074863
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||  | ||| ||  ||||| ||||||||| |||||||||||||| | ||| ||||||||     
T  31074751 taacatttactcttttatttgatgaaatcaatacatgtcctaacactttatgttgattctattttcaaaatgtagacccacaatga-ttagaccaataag 31074849  T
Q  287 aaagtgtgtattag 300  Q
    | |||| |||||||    
T  31074850 agagtgggtattag 31074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 11430467 - 11430614
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattta 276  Q
    |||||||| || |||| ||||||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||| | || ||| | | ||     
T  11430467 cactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaatt- 11430565  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
     |||||||||| |||| ||  ||||||||||| ||||||||| ||||||    
T  11430566 caccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttg 11430614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 41095751 - 41095615
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 288  Q
    |||| |||| |||||||| |||||||||||||||||| |  | | |||| || ||| |||||||||||||| | || ||| | |||| | |||||||| |    
T  41095751 cactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttcaaagtgtaggtcctacattgatttcacccaataaata 41095652  T
Q  289 agtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||  ||||||||||| ||||||||| ||||||    
T  41095651 agtgagtgctagagagagtgctcaaaagagagtgttg 41095615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 318
Target Start/End: Complemental strand, 37553105 - 37552965
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | || |||||||| | |||||||||||||| ||||| ||||| |  | |||  | || ||  |||||||||||||||| ||||||| ||||    
T  37553105 aacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaatgattt 37553006  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||| |||||| | |||| |||||  | ||||||||||||||||    
T  37553005 aaatcaataagagagtgagtatt--aaagagtgttcaaaagag 37552965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 39039512 - 39039470
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaa 217  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  39039512 caacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 325
Target Start/End: Complemental strand, 13388491 - 13388343
Alignment:
Q  180 ctctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgt--ggggattcaattttcaaagtgtagaccc-acaattattta 276  Q
    ||||||| | |||| ||||||||||||| |||||||||||||||||  || | ||| |  | || ||  |||||||||||||||   | ||| | ||||     
T  13388491 ctcttttgagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttc 13388392  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | |||||||||||||| || ||||||||||| |||||||||| ||||||    
T  13388391 atccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttg 13388343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 318
Target Start/End: Complemental strand, 33060039 - 33059907
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 284  Q
    ||||||| | |||||||||||||||||||| || | |||||| || | | | || || || |||||| |||||||| || ||||||  ||||||||||||    
T  33060039 tttaacagtcactcttttattggatgaaattaaagcatgtcc-accactctctgtgggtttaatttttaaagtgtacactcacaatgttttaaaccaata 33059941  T
Q  285 aaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    | | |||| ||| |||| | ||||||||||||||    
T  33059940 agagagtgggtactagaaaaagtgttcaaaagag 33059907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 3872723 - 3872679
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||    
T  3872723 ttcaatttccaaagtgtagacccacaatgattcaaaccaataaaa 3872679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 325
Target Start/End: Original strand, 11135777 - 11135913
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 288  Q
    |||| ||| ||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||| | || ||| | |||| | |||||||||     
T  11135777 cactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaag 11135876  T
Q  289 agtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||  ||||||||||  ||||||||| ||||||    
T  11135877 agtgagtgctagagagagtcctcaaaagagagtgttg 11135913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 9165340 - 9165379
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctac 229  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  9165340 cactcactcttttattgggtgaaatcaatgtatgtcctac 9165379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 21466681 - 21466634
Alignment:
Q  271 tatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    |||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  21466681 tatttaaatcaataagaaagtgaatattagagagagtgttcaaaagag 21466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 28109906 - 28110040
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataaaaa 288  Q
    |||| ||| ||||||||| ||||||||||| |||| | || ||||| || || ||| |||| ||||||||||| || | ||| |||| | ||||||||||    
T  28109906 cactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccattt-caaagtgtagatcctagaatgatttcatccaataaaaa 28110004  T
Q  289 agtgtgtattagagagagtgttcaaaagagtgtgtt 324  Q
    |||| |||||||||| |||  | ||||||| |||||    
T  28110005 agtgagtattagagaaagtacttaaaagagagtgtt 28110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 39974266 - 39974207
Alignment:
Q  266 acaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||| |||||||||||||| | |||| |||||||| ||| |||||||||||| ||||||    
T  39974266 acaatgatttaaaccaataagagagtgagtattagaaagaatgttcaaaagagagtgttg 39974207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 35336911 - 35337018
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    |||||||||||||||||||||| |  ||    | |||||| || ||||||||||  | ||||||| |||||| |||||||||||||| | |  | |||||    
T  35336911 ttttattggatgaaatcaatgtctcacc----actttgtgtgggttcaattttcttaatgtagacacacaatgatttaaaccaataagagaacgagtatt 35337006  T
Q  299 agagagagtgtt 310  Q
    ||||||||||||    
T  35337007 agagagagtgtt 35337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 37525572 - 37525662
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||| ||||||| ||| | |||||||| | || ||||| || || ||||||||||||||| |||| | ||||| |||||||| |||||    
T  37525572 actctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaataa 37525662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 27464656 - 27464701
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgt 220  Q
    ||||||| ||||||| ||| ||||||| ||||||||||||||||||    
T  27464656 caacactatttttaatactcactctttgattggatgaaatcaatgt 27464701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 46335142 - 46335223
Alignment:
Q  197 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 278  Q
    |||||||||||||||||||||| ||| |||||| | |||||  |  ||  |||||||| || |||||||||||| |||||||    
T  46335142 tcttttattggatgaaatcaatctatatcctaccactttgtcagagttatattttcaatgtatagacccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 46793037 - 46792996
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatca 216  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  46793037 caacactctttttaacacttacttttttattggcttaaatca 46792996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 18157093 - 18157049
Alignment:
Q  279 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgt 323  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||    
T  18157093 ccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgt 18157049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 39499442 - 39499534
Alignment:
Q  200 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtg 292  Q
    |||||| ||| ||||||||||||||| ||  | ||| || |  ||||||||||||| |||||| ||||||| ||||||  |||||| ||||||    
T  39499442 tttattagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataagaaagtg 39499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 26767903 - 26767776
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||||||||||||| |||||||||||||||||||||| || | |||||| || ||||||||||||| ||||||| |||||| |||||||||||||||| |    
T  26767903 cacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaattttcaaattgtagactcacaatgatttaaaccaataaaaga 26767804  T
Q  290 gtgtgtattagagagagtgttcaaaaga 317  Q
    ||| |||||||| |||||||||||||||    
T  26767803 gtgagtattagatagagtgttcaaaaga 26767776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 12989214 - 12989364
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| |||  |||| ||||||| |||||||||||||||||||||||| || | |||||  |||||| |||| | ||||||||||||||||| |||    
T  12989214 caacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctatttccgaagtgtagacccacaatgatt 12989313  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| | |||| ||||||||||||||||||||||||| ||||||    
T  12989314 taaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 12989364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 6980277 - 6980127
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| ||||||||||||||||||||||| |||||| |||| | |||||| |  ||||||||||||||| |||||||||||| |||    
T  6980277 caacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtatagacccacaatgatt 6980178  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | ||| ||||| | |||| |||||||||| |||||||||||||| ||||||    
T  6980177 tcaactaataagagagtgagtattagagaaagtgttcaaaagagagtgttg 6980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 9470116 - 9470253
Alignment:
Q  187 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 286  Q
    ||||||| |||||||||||||||||||||||||||||||| || | |||||  || |||||||||||||||||||||||||||| ||||||||||||||     
T  9470116 taacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataag 9470215  T
Q  287 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | ||||  |||||||||| || |||| ||||| ||||||    
T  9470216 agagtgaatattagagagggt-ttcagaagagagtgttg 9470253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 45554590 - 45554732
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | || |||| |||||||||||||||||||||||||||||||| || | ||||        |||||||| ||||||||||||||||| |||    
T  45554590 caacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caattttccaagtgtagacccacaatgatt 45554681  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| ||||||    
T  45554682 taaaccaataagaaagtgagtattagagagaatgttcaaaagagagtgttg 45554732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 38464186 - 38464329
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | | ||| ||||| |||||||| ||||||||||||||||||  |  | |||| | || |||||||||||||||||||||||||||| |||    
T  38464186 caacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgatt 38464285  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||||| | |||  |||||||||||||||||||||||||    
T  38464286 taaaccaataagagagtaagtattagagagagtgttcaaaagag 38464329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 195 - 318
Target Start/End: Complemental strand, 30718463 - 30718341
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||||||||||||| || |||||||  | |||||||| |||||  ||||||||||||||||| |||||| |||||||||||||||||||||      
T  30718463 actcttttattggatgaaatcgatatatgtccatc-attttgtgtggattgtattttcaaagtgtagactcacaatgatttaaaccaataaaaaagtgaa 30718365  T
Q  295 tattagagagagtgttcaaaagag 318  Q
    |||||||||||||||  |||||||    
T  30718364 tattagagagagtgtctaaaagag 30718341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 15884458 - 15884595
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 276  Q
    ||||||| || ||||||||||||||||||||| |||||||||||    || || | |||||| || ||||||||||||| ||||||||||||||||||||    
T  15884458 acactctcttcaacacttactcttttattggacgaaatcaatgt----cccaccactttgtgtgggttcaattttcaaaatgtagacccacaattattta 15884553  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||| | | || ||||||||||  ||| |||||||||    
T  15884554 aaccaataagataatgagtattagagattgtggtcaaaagag 15884595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 44274260 - 44274407
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 277  Q
    |||||| | ||||| | ||||||| ||||||| |||||||||||||||| || | |||||| || ||||| |||||||||||||| ||||||| ||||||    
T  44274260 cactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaa 44274359  T
Q  278 accaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| | |||| || ||||||||| | || ||||||| ||||||    
T  44274360 accaataacagagtgagtgttagagagaatatttaaaagagagtgttg 44274407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 18511351 - 18511256
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||| || || |||||||||||||||| ||||| |||||  |||||||||||||    
T  18511351 cactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaattttcaaagtgaagacctacaatgttttaaaccaataa 18511256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 10981542 - 10981687
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||| | ||||||| ||| || ||||| ||||||  ||||||||||| || | |||||| || ||| |||| ||| ||||||||||||||| ||||    
T  10981542 aacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgattt 10981641  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 321  Q
    |||||||||| | |||| ||||||||| |||||||| | |||||||    
T  10981642 aaaccaataagagagtgagtattagagggagtgttctagagagtgt 10981687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 36471995 - 36471863
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||||| | | ||||| | ||| ||||||||||||||||| |||||||  || | ||| |  |||||||||||||||| |||| || |||||| |||    
T  36471995 caacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaaactcacaatgatt 36471896  T
Q  275 taaaccaataaaaaagtgtgtattagagagagt 307  Q
    ||||||||||||| |||| ||||||||||||||    
T  36471895 taaaccaataaaagagtgagtattagagagagt 36471863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 37652402 - 37652263
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||| |||||| |||||||| ||||||| |||||||||||||||||| | ||   ||||||    |||||||| ||| |||||||  |||||| |||    
T  37652402 caacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtagattcacaatgatt 37652303  T
Q  275 taaaccaataaaaaagtgtgtattagagagagtgttcaaa 314  Q
    ||||||||||||||||||  ||| ||||||| ||||||||    
T  37652302 taaaccaataaaaaagtgaatataagagagaatgttcaaa 37652263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 318
Target Start/End: Original strand, 11539447 - 11539592
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaat--gtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaatt-a 272  Q
    |||||||||| || |||| ||||||||||||||||||||||||  |||||| | |  | |||||| |  ||| |||||||||||||||| ||| |||| |    
T  11539447 aacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccagaattga 11539546  T
Q  273 tttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||||||||| | |||| ||||||||||||||||  |||||||    
T  11539547 tttaaaccaataagagagtgagtattagagagagtgtgtaaaagag 11539592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 35316538 - 35316409
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 294  Q
    ||||||||||| ||| |||| ||||||||||| || ||||| ||  ||||||||||| ||| |||||||||||||| ||||||| |||||| | |||| |    
T  35316538 actcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagagtgag 35316439  T
Q  295 tattagagagagtgttcaaaagagtgtgtt 324  Q
    ||| | | |||||| ||||||||| |||||    
T  35316438 tatcataaagagtgctcaaaagagagtgtt 35316409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 16719587 - 16719463
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 274  Q
    ||||||| | |||| ||| |||||||||||| |||||||||||||||| ||| || ||||  ||  | ||||||||||||| ||||||||| |||| |||    
T  16719587 caacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaatgtagacccgcaatgatt 16719488  T
Q  275 taaaccaataaaaaagtgtgtatta 299  Q
    |||||||||| |||| || ||||||    
T  16719487 taaaccaatacaaaaatgagtatta 16719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 25238362 - 25238284
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||  |||||| |||||| ||||||| ||||||    
T  25238362 attttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgctagagaaagtgtttaaaagagagtgttg 25238284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 310
Target Start/End: Original strand, 3804607 - 3804743
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgtatgt-cctactattttgtggggattcaattttcaaagtgtagacccacaattat 273  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||| || |  | ||| ||  | || ||||||||||||||| ||||||||| ||    
T  3804607 caacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaattttcaaagtgtacacccacaataat 3804706  T
Q  274 ttaaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    |||||  ||||||| |||  |||||| | ||||||||    
T  3804707 ttaaattaataaaatagtaagtattataaagagtgtt 3804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 15508938 - 15509024
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    |||||||||| ||||||| ||||||||||||  |||||||||||||||||| || ||||| || || ||| |||| |||||||||||    
T  15508938 aacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccatttccaaagtgtaga 15509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 310
Target Start/End: Complemental strand, 33678271 - 33678138
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||||| ||||||||| ||||| |||| |||||||||||||||| || || |  | | | || ||| ||||  || |||||||| |||||| ||||    
T  33678271 aacactctttataacacttattctttaattgaatgaaatcaatgtatgcccaaccacat-gcgtgggttctatttcaaatgtgtagactcacaataattt 33678173  T
Q  276 aaaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    |||||||||||||||||  |||||||||| |||||    
T  33678172 aaaccaataaaaaagtgaatattagagagtgtgtt 33678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 34142272 - 34142186
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||||||||||||  |||||||||  |||| |||||| || ||||||||||||||||||||  ||||||  |||||||||||||    
T  34142272 ttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgtagagtcacaatggtttaaaccaataa 34142186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 45270694 - 45270600
Alignment:
Q  194 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaa 288  Q
    |||| ||||||||||| |||| |||||||||   ||||||||||| | |||| ||||| |||||||| || |||||| |||||||||||||||||    
T  45270694 tacttttttattggataaaattaatgtatgtatcactattttgtgtgaattcgattttgaaagtgtaaactcacaatgatttaaaccaataaaaa 45270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 7919382 - 7919317
Alignment:
Q  220 tatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    ||||||| || | |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataa 7919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 17188103 - 17188200
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 287  Q
    |||| ||| |||||||||||||||||||||| | ||  || | |||||| | | |||||||||||||||||| |||| ||| ||||||||||||||||    
T  17188103 cactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgtaggcccagaatgatttaaaccaataaaa 17188200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 32856277 - 32856142
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 289  Q
    |||| |||||||||| ||||||||| ||| |||||   || | |||||| || || ||||||||||||||||| ||| | | |||||||||||||| | |    
T  32856277 cactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggttgaattttcaaagtgtagatccatagtgatttaaaccaataagaga 32856178  T
Q  290 gtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
     || |||||||| || |||||||||| || ||||||    
T  32856177 ttgagtattagaaagggtgttcaaaatagagtgttg 32856142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 2476572 - 2476645
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagac 263  Q
    |||||||||||||||| ||| |||||||||||||||| |||| ||||||    ||||||||||||| |||||||    
T  2476572 cacttactcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaattttcaaaatgtagac 2476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 14489626 - 14489553
Alignment:
Q  245 caattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 318  Q
    ||||||| |||||||||| ||||||| |||||||||||||||| | || |||||||||| | | ||||||||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagagaaaattttcaaaagag 14489553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 43414394 - 43414485
Alignment:
Q  191 acttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaa 282  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||| |    | | ||||||| ||| |||| ||||||| |||||||||||    
T  43414394 acttacttttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaa 43414485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 4552925 - 4552847
Alignment:
Q  247 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| ||||||||||||||| |||||||||||||| | |||| |||| ||| | | |||||||||| | ||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtatcagaaaaaatgttcaaaagtgagtgttg 4552847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 14489676 - 14489722
Alignment:
Q  250 ttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 296  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||    
T  14489676 ttcaaagtgtagactcacaataatttaaatcaataaaaaagtgtgta 14489722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 24497218 - 24497344
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 277  Q
    |||||| ||||||| |  || |||||||||||||||  ||||||||| | |  |||||||| |||||  |||||||||||||||||| | | | ||||||    
T  24497218 cactctctttaacagtcgcttttttattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgtagaccaagagtgatttaa 24497317  T
Q  278 accaataaaaaagtgtgtattagagag 304  Q
    || ||||  | |||| |||||||||||    
T  24497318 actaataggagagtgagtattagagag 24497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 317
Target Start/End: Complemental strand, 472323 - 472178
Alignment:
Q  172 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaatt 271  Q
    |||||||| ||||| ||| ||||| | ||| ||||||| ||||||   ||||||  | || |||||| |  ||||||||||||| | || | |||||||     
T  472323 tagcaacattctttctaatacttattttttaattggatcaaatcagcatatgtctcattactttgtgtgagttcaattttcaaaatatatatccacaatg 472224  T
Q  272 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 317  Q
    |||||||||||||| | || | |||||| |||||||| ||||||||    
T  472223 atttaaaccaataagagagcgagtattaaagagagtgctcaaaaga 472178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 4964815 - 4964686
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 288  Q
    |||| ||| ||||||||| |||||||||||||||||| || | ||| || |||||  |||||||||||||| | || ||| | || | | |||||||||     
T  4964815 cactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcattttcaaagtgtaggtcctacattgatcttatccaataaaag 4964716  T
Q  289 agtgtgtattagagagagtgttcaaaagag 318  Q
    |||| ||  |||||||||| ||||||||||    
T  4964715 agtgagtgctagagagagtattcaaaagag 4964686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 41805923 - 41805882
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtcc 226  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  41805923 tttaacactcactcttttattggataaaatcaatgtatgtcc 41805882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 318
Target Start/End: Complemental strand, 24895404 - 24895280
Alignment:
Q  195 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgt 293  Q
    ||||||||| ||||| |||||||||||| | | || ||||| || |  ||| |||| ||||||||| |||||||| | |||||| ||||| ||| ||||     
T  24895404 actcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaaagtgtatgacccacattgatttaacccaatgaaagagtga 24895305  T
Q  294 gtattagagagagtgttcaaaagag 318  Q
    || ||||||||||| | ||||||||    
T  24895304 gtgttagagagagtatccaaaagag 24895280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 25730595 - 25730479
Alignment:
Q  176 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 275  Q
    |||||||||| ||||||| ||| |||||||||||| |||  |||||||||  || || || || || ||| ||||| || ||||| || |||| | ||||    
T  25730595 aacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcacagtgattt 25730496  T
Q  276 aaaccaataaaaaagtg 292  Q
    |||||||||||| ||||    
T  25730495 aaaccaataaaagagtg 25730479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 28898179 - 28898043
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga-cccacaattatttaaaccaataaaaa 288  Q
    |||| ||||||||||||| |||||||||||||||||| || | ||| || || ||  |||| ||||||||||| || ||| | |||| | |||||||||     
T  28898179 cactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttcatccaataaaag 28898080  T
Q  289 agtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| ||  || |||||||  ||||||||| ||||||    
T  28898079 agtgagtgctaaagagagtactcaaaagagagtgttg 28898043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 37719860 - 37719903
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgta 221  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  37719860 cactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 42182927 - 42182998
Alignment:
Q  190 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 261  Q
    |||| ||||||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||||    
T  42182927 cactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtag 42182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 19639184 - 19639226
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  19639184 ttcaattttcaaagtgcagacctacaatgatttaaaccaataa 19639226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 19837777 - 19837819
Alignment:
Q  243 ttcaattttcaaagtgtagacccacaattatttaaaccaataa 285  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  19837777 ttcaattttcaaagtgcagacctacaatgatttaaaccaataa 19837819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 28898061 - 28898103
Alignment:
Q  179 actctttttaacacttactcttttattggatgaaatcaatgta 221  Q
    ||||| |||| |||| |||||||||||||||||||||||||||    
T  28898061 actctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 42579817 - 42579771
Alignment:
Q  172 tagcaacactctttttaacacttactcttttattggatgaaatcaat 218  Q
    |||||||||||| |  |||||| ||||||||||||||||||||||||    
T  42579817 tagcaacactctctcaaacactcactcttttattggatgaaatcaat 42579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 80444 - 80403
Alignment:
Q  266 acaattatttaaaccaataaaaaagtgtgtattagagagagt 307  Q
    ||||| |||||||||||||||||| || ||||||||||||||    
T  80444 acaataatttaaaccaataaaaaaatgagtattagagagagt 80403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 11729760 - 11729715
Alignment:
Q  175 caacactctttttaacacttactcttttattggatgaaatcaatgt 220  Q
    ||||||||||| ||||| ||| |||||||||| |||||||||||||    
T  11729760 caacactctttctaacatttattcttttattgaatgaaatcaatgt 11729715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 310
Target Start/End: Complemental strand, 31395599 - 31395466
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattta 276  Q
    |||||| |||| |||| |||| |||||||| ||||||||||||||||||  | | ||| || |||||| |||| || |||||| | || ||| ||||||     
T  31395599 cactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtggattccatttccatagtgtaggtcctacatttatttc 31395500  T
Q  277 aaccaataaaaaagtgtgtattagagagagtgtt 310  Q
    | ||||||||| | || ||  |||||||||||||    
T  31395499 acccaataaaagattgagtgctagagagagtgtt 31395466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 299
Target Start/End: Original strand, 30849284 - 30849384
Alignment:
Q  199 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 298  Q
    ||||||| ||||||||||||||| |||| || | |||||  || ||| ||||| ||||  || | ||||||| ||||||| |||||| |||||| |||||    
T  30849284 ttttattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtatt 30849383  T
Q  299 a 299  Q
    |    
T  30849384 a 30849384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 27845 - 27985
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 284  Q
    |||| |||| || ||||||||||||| ||||||||||||||| || | |||||| || ||| |||| ||||||||||||||||||| |||||||||||||    
T  27845 tttagcactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaata 27944  T
Q  285 aaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    | | |||| |||||| |||||||||||||||||| ||||||    
T  27945 agagagtgagtattaaagagagtgttcaaaagagggtgttg 27985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 9675 - 9797
Alignment:
Q  163 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    |||||||  |||||||||||| | ||||||| ||| |||||||||||||||||||||||| ||| || |||||||| || ||||||||| ||||||||||    
T  9675 gaggaatgctagcaacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtaga 9774  T
Q  263 cccacaattatttaaaccaataa 285  Q
    | |||||| |||||||| |||||    
T  9775 ctcacaataatttaaacgaataa 9797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 11221 - 11343
Alignment:
Q  163 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 262  Q
    |||||||  |||||||||||| | ||||||| ||| |||||||||||||||||||||||| ||| || |||||||| || ||||||||| ||||||||||    
T  11221 gaggaatgctagcaacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtaga 11320  T
Q  263 cccacaattatttaaaccaataa 285  Q
    | |||||| |||||||| |||||    
T  11321 ctcacaataatttaaacgaataa 11343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 178 - 315
Target Start/End: Complemental strand, 27016 - 26879
Alignment:
Q  178 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 277  Q
    |||||| ||||||||| ||||| ||||||||  |||||||||||||| | || | |||||| || |||||||||||||| ||||||||| |||  |||||    
T  27016 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaa 26917  T
Q  278 accaataaaaaagtgtgtattagagagagtgttcaaaa 315  Q
    |||||||||| ||||  | ||||||| |||| ||||||    
T  26916 accaataaaagagtggatgttagagaaagtgctcaaaa 26879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 204796 - 204715
Alignment:
Q  244 tcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||||||| ||| |||||||  |||||||| ||||||||||||| |||| ||| |||||||| ||||||||| || ||||||    
T  204796 tcaatttttaaattgtagacttacaattatataaaccaataaaagagtgagtactagagagaatgttcaaaaaagagtgttg 204715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 8494 - 8418
Alignment:
Q  249 tttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 325  Q
    |||| |||||||||| || ||| |||||||||||||||| | |  |||||| ||||||| |||||||||| ||||||    
T  8494 tttcgaagtgtagactcataatgatttaaaccaataaaagaattagtattaaagagagtattcaaaagagagtgttg 8418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 8562 - 8522
Alignment:
Q  185 tttaacacttactcttttattggatgaaatcaatgtatgtc 225  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  8562 tttaacatttactcttttatgggatgaaatcaatatatgtc 8522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 3340 - 3397
Alignment:
Q  247 attttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgtattagagag 304  Q
    |||||||||||||| |||||||||| ||||||| ||||||| |||||||| ||||||||    
T  3340 attttcaaagtgtaagacccacaatgatttaaa-caataaacaagtgtgtgttagagag 3397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15021 - 14972
Alignment:
Q  177 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcc 226  Q
    ||||||| ||||| ||||||||||||||||  |||||| |||||||||||    
T  15021 acactctctttaatacttactcttttattgagtgaaattaatgtatgtcc 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University