View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17182_low_9 (Length: 247)
Name: NF17182_low_9
Description: NF17182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17182_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 4411218 - 4411000
Alignment:
| Q |
13 |
caacttgctacactggacgtttatgtgcattctaagctttacttcgaaaattcaagagaggggaaatttctcaaaaatttcaaaaaatgtaaattatagt |
112 |
Q |
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| T |
4411218 |
caacttgctacactggacgtttgtgtgcattctaagctttacttcgaaaattcaagagaggggaaatttctcaaaaatttcaaaaaatgtaaattatagt |
4411119 |
T |
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| Q |
113 |
attacttctctttttatgcaaaagtaaatatgtttcaataatatgttgtatgtatctttttataagaagacttaagcaatgacaaaacataaaaatatat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4411118 |
attacttctctttttatgcaaaagtaaatatgtttcaataatatgttgtatgtatctttttataagaagacttaagcaatgacaaaacataaaaatatat |
4411019 |
T |
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| Q |
213 |
ttaatttcccatcagaaat |
231 |
Q |
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||||||||||||||||||| |
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| T |
4411018 |
ttaatttcccatcagaaat |
4411000 |
T |
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