View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17184_high_22 (Length: 255)
Name: NF17184_high_22
Description: NF17184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17184_high_22 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 4619915 - 4620164
Alignment:
| Q |
1 |
aatggcaggaaacatctctggtccaagtgtgagcaatgctgctaatattttgctgaatcatgacttctcaaatgacctgaactcttggcatctcaattgc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4619915 |
aatggcaggaaacatctctggtccaagtgtgagcaatgctgctaatattttgctgaatcatgacttctcaaatgacctgaactcttggcatctcaattgc |
4620014 |
T |
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| Q |
101 |
tgcaatggctatgtaatttcgtccaaagcaggtggtcaaggtgtaaatttgatggattcggattgtaattatgccgttatcaccgaccgaaacgaaggct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
4620015 |
tgcaatggctatgtaatttcgtccaaagcaggtggtcaaggtgtaaatttgatggattcggattgtaattatgctgttatcaccgaccgaaacgaaggct |
4620114 |
T |
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| Q |
201 |
ggcaaggtcttgagcaagatatcacagacagaatttccacaggttctgct |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
4620115 |
ggcaaggtcttgagcaagatatcacagacagaatttccattggttctgct |
4620164 |
T |
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