View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17185_high_21 (Length: 295)
Name: NF17185_high_21
Description: NF17185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17185_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 14168807 - 14169070
Alignment:
| Q |
15 |
aatatagacggtcttctaagcaataaaaaagtgatatttgagtgaatgactccatcatcaagtaacatcttaacatttctaataaaatgaaaatgaccaa |
114 |
Q |
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| T |
14168807 |
aatatagacggtcttctaagcaataaaaaagtgatatttgagtgaatgactccatcatcaagtaacatcttaacatttctaataaaatgaaaatgaccaa |
14168906 |
T |
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| Q |
115 |
agaaatgtttacaatgaattatacgttcaataactttctcattagaaggaaggaacattcttaccgattcaaatgtagggattatactattctcaagact |
214 |
Q |
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| T |
14168907 |
agaaatgtttacaatgaagtatacgttcaataactttctcattagaaggaaggaacattcttaccgattcaaatgtagggattatactattctcaagact |
14169006 |
T |
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| Q |
215 |
agaaccaagaattctagggcttcttgtaactatctccacaatatcaatatttgaagcacctttt |
278 |
Q |
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| T |
14169007 |
agaaccaagaattctagggcttcttgtaactatctccacaatatcaatatttgaagcacctttt |
14169070 |
T |
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