View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17185_low_8 (Length: 443)
Name: NF17185_low_8
Description: NF17185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17185_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 134 - 434
Target Start/End: Complemental strand, 46904302 - 46904002
Alignment:
| Q |
134 |
catgattgaattattctcagtactcctgaatcatccaagcnnnnnnnnnntcaagacattattgaatcatccaaggccaagcaaaaatggggctagttta |
233 |
Q |
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| T |
46904302 |
catgattgaattattctcggtactcctgaatcatccaagtaaaaaaaaaatcaagacattattgaatcatccaaggccaagcaaaaatggggctagttta |
46904203 |
T |
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| Q |
234 |
gcatttgtcttgaaaaatcgcgacaacacaaaatgagctatacctaatgttgtagttgctactattaacacctcatttatttcctaacaagttcctactt |
333 |
Q |
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| T |
46904202 |
gcatttgtcttgaaaaatcgcgacaacacaaaatgagctatagctaatgttgtagttgctactattaacacctcatttatttcctaacaagttcctactt |
46904103 |
T |
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| Q |
334 |
atattttcttccgtaaatttagttttagatgacataaaatacttcaggaactaaattttgaaaggnnnnnnntatacaaaaagttgcatgttgaacctat |
433 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
46904102 |
atattttcttccataaatttagttttagatgacataaaatacttcaggaactaaattttgaaaggaaaaaaatatacaaaaagttgcatgttgaacctat |
46904003 |
T |
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| Q |
434 |
g |
434 |
Q |
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| T |
46904002 |
g |
46904002 |
T |
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