View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17186_low_4 (Length: 493)

Name: NF17186_low_4
Description: NF17186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17186_low_4
NF17186_low_4
[»] chr6 (56 HSPs)
chr6 (320-477)||(639397-639556)
chr6 (299-459)||(639210-639372)
chr6 (270-477)||(638663-638872)
chr6 (30-169)||(638423-638562)
chr6 (301-477)||(1578063-1578241)
chr6 (298-477)||(1578226-1578407)
chr6 (301-477)||(7655421-7655601)
chr6 (301-462)||(34961899-34962064)
chr6 (301-477)||(639710-639888)
chr6 (350-477)||(1577949-1578075)
chr6 (298-462)||(2190815-2190981)
chr6 (301-458)||(30405493-30405654)
chr6 (305-477)||(29616496-29616672)
chr6 (300-477)||(12600759-12600938)
chr6 (301-477)||(1577741-1577919)
chr6 (298-477)||(639541-639722)
chr6 (298-458)||(34961370-34961534)
chr6 (302-462)||(30404955-30405119)
chr6 (312-462)||(34961724-34961878)
chr6 (322-462)||(640082-640224)
chr6 (334-477)||(1577608-1577753)
chr6 (301-454)||(639026-639183)
chr6 (298-462)||(24037032-24037198)
chr6 (298-462)||(34961204-34961370)
chr6 (298-462)||(12600923-12601092)
chr6 (298-460)||(34962082-34962248)
chr6 (312-420)||(30405690-30405800)
chr6 (355-477)||(638916-639038)
chr6 (298-390)||(29616118-29616212)
chr6 (302-401)||(30404769-30404870)
chr6 (301-462)||(7655622-7655786)
chr6 (332-422)||(34967725-34967817)
chr6 (411-474)||(34961153-34961216)
chr6 (298-477)||(34964620-34964798)
chr6 (298-462)||(639873-640040)
chr6 (298-373)||(29616657-29616734)
chr6 (360-462)||(34961608-34961710)
chr6 (301-462)||(24036091-24036253)
chr6 (312-417)||(30405133-30405240)
chr6 (312-384)||(2190543-2190617)
chr6 (298-462)||(2190631-2190797)
chr6 (312-420)||(30401570-30401680)
chr6 (301-477)||(7655774-7655954)
chr6 (301-404)||(30405308-30405412)
chr6 (408-471)||(24036034-24036097)
chr6 (409-471)||(2191845-2191907)
chr6 (301-404)||(2192076-2192181)
chr6 (336-462)||(7655975-7656104)
chr6 (301-404)||(24035761-24035866)
chr6 (301-420)||(29616307-29616427)
chr6 (301-391)||(7655341-7655433)
chr6 (312-350)||(24037396-24037434)
chr6 (373-462)||(2191689-2191778)
chr6 (361-422)||(29615978-29616039)
chr6 (407-460)||(29616045-29616098)
chr6 (363-437)||(24035952-24036023)
[»] chr1 (15 HSPs)
chr1 (306-477)||(24665670-24665843)
chr1 (320-462)||(48739610-48739756)
chr1 (298-477)||(24665338-24665519)
chr1 (301-477)||(24665504-24665682)
chr1 (298-462)||(24665850-24666016)
chr1 (298-462)||(48739420-48739588)
chr1 (298-462)||(24666202-24666368)
chr1 (350-462)||(48234384-48234498)
chr1 (301-420)||(41468435-41468556)
chr1 (301-477)||(24666353-24666531)
chr1 (301-404)||(41468255-41468360)
chr1 (301-398)||(41468015-41468114)
chr1 (411-484)||(24665994-24666067)
chr1 (350-415)||(24666083-24666148)
chr1 (301-374)||(48739777-48739852)
[»] chr7 (33 HSPs)
chr7 (298-457)||(35466796-35466957)
chr7 (313-475)||(13930366-13930530)
chr7 (301-477)||(15738134-15738312)
chr7 (298-477)||(15737968-15738149)
chr7 (298-477)||(35466630-35466811)
chr7 (298-463)||(8948290-8948457)
chr7 (334-462)||(8948160-8948290)
chr7 (350-477)||(15738300-15738426)
chr7 (335-462)||(8947295-8947424)
chr7 (298-477)||(8947090-8947273)
chr7 (309-462)||(13910254-13910409)
chr7 (320-477)||(44213590-44213749)
chr7 (301-477)||(15738456-15738634)
chr7 (298-457)||(35466962-35467123)
chr7 (334-477)||(15738622-15738767)
chr7 (298-415)||(8947442-8947560)
chr7 (301-462)||(13914341-13914503)
chr7 (298-462)||(13910070-13910236)
chr7 (301-457)||(35467131-35467289)
chr7 (298-436)||(8947607-8947747)
chr7 (298-462)||(8947793-8947959)
chr7 (301-477)||(35467297-35467475)
chr7 (302-384)||(13909982-13910066)
chr7 (409-477)||(8947740-8947808)
chr7 (298-474)||(13914494-13914672)
chr7 (298-477)||(8947959-8948140)
chr7 (407-477)||(13914657-13914727)
chr7 (312-437)||(13914737-13914861)
chr7 (298-366)||(13930517-13930587)
chr7 (105-159)||(8946329-8946383)
chr7 (334-420)||(13930241-13930329)
chr7 (301-404)||(13914913-13915018)
chr7 (429-462)||(13930318-13930351)
[»] chr8 (30 HSPs)
chr8 (324-474)||(123992-124144)
chr8 (298-462)||(34907375-34907541)
chr8 (298-460)||(23484295-23484461)
chr8 (298-460)||(23484481-23484647)
chr8 (298-456)||(23484667-23484829)
chr8 (298-477)||(23483757-23483938)
chr8 (313-458)||(32058698-32058845)
chr8 (313-462)||(32058860-32059011)
chr8 (298-462)||(124578-124744)
chr8 (322-462)||(32059026-32059168)
chr8 (298-421)||(124435-124560)
chr8 (298-423)||(23484109-23484236)
chr8 (298-422)||(34907541-34907666)
chr8 (302-477)||(23484857-23485034)
chr8 (301-457)||(32059290-32059448)
chr8 (298-422)||(34907196-34907322)
chr8 (302-462)||(124762-124926)
chr8 (302-477)||(23480035-23480212)
chr8 (298-460)||(16534956-16535120)
chr8 (301-460)||(23483926-23484089)
chr8 (298-462)||(16535467-16535632)
chr8 (324-477)||(32059436-32059591)
chr8 (312-384)||(16534682-16534756)
chr8 (298-399)||(124995-125098)
chr8 (350-460)||(32059194-32059304)
chr8 (350-470)||(9873456-9873575)
chr8 (312-351)||(9874262-9874301)
chr8 (409-471)||(16535623-16535685)
chr8 (298-351)||(16534883-16534936)
chr8 (301-404)||(16535854-16535959)
[»] chr2 (17 HSPs)
chr2 (350-475)||(18454154-18454279)
chr2 (298-422)||(15571581-15571707)
chr2 (313-458)||(12522776-12522923)
chr2 (312-462)||(18454351-18454505)
chr2 (301-471)||(18453326-18453498)
chr2 (298-477)||(18453986-18454167)
chr2 (350-462)||(18454519-18454631)
chr2 (298-477)||(18453486-18453667)
chr2 (298-455)||(18453176-18453335)
chr2 (360-476)||(18453653-18453769)
chr2 (303-459)||(14493111-14493269)
chr2 (319-389)||(6988644-6988716)
chr2 (366-462)||(15571725-15571821)
chr2 (382-477)||(14493259-14493354)
chr2 (322-420)||(12522960-12523060)
chr2 (334-418)||(14493350-14493436)
chr2 (429-462)||(12522938-12522971)
[»] chr5 (12 HSPs)
chr5 (301-477)||(11234665-11234843)
chr5 (312-477)||(11234831-11235000)
chr5 (298-477)||(11235167-11235348)
chr5 (301-477)||(11234499-11234677)
chr5 (298-462)||(22256537-22256703)
chr5 (301-462)||(11235014-11235179)
chr5 (298-462)||(22259521-22259686)
chr5 (408-471)||(22259677-22259740)
chr5 (298-417)||(11234393-11234514)
chr5 (298-351)||(22256466-22256519)
chr5 (312-350)||(22256301-22256339)
chr5 (301-404)||(22259908-22260013)
[»] chr4 (40 HSPs)
chr4 (301-471)||(47325055-47325227)
chr4 (301-471)||(47339851-47340023)
chr4 (298-477)||(43265686-43265867)
chr4 (298-422)||(13739940-13740066)
chr4 (298-462)||(13743213-13743381)
chr4 (298-476)||(43265852-43266032)
chr4 (350-475)||(47324274-47324399)
chr4 (350-475)||(47339070-47339195)
chr4 (298-422)||(13742850-13742976)
chr4 (301-477)||(15781294-15781471)
chr4 (301-462)||(47324555-47324720)
chr4 (301-462)||(47339351-47339516)
chr4 (350-476)||(47324108-47324234)
chr4 (298-477)||(47324386-47324567)
chr4 (350-476)||(47338904-47339030)
chr4 (298-477)||(47339182-47339363)
chr4 (298-447)||(43264720-43264871)
chr4 (301-418)||(43265174-43265293)
chr4 (298-437)||(43265337-43265475)
chr4 (298-462)||(13743029-13743195)
chr4 (298-477)||(47324886-47325067)
chr4 (298-477)||(47339682-47339863)
chr4 (334-476)||(47324756-47324900)
chr4 (334-476)||(47339552-47339696)
chr4 (301-426)||(15780759-15780886)
chr4 (298-437)||(15780922-15781060)
chr4 (298-422)||(13743399-13743525)
chr4 (298-404)||(43265017-43265125)
chr4 (366-462)||(13739826-13739922)
chr4 (312-399)||(15780561-15780650)
chr4 (365-455)||(47325283-47325373)
chr4 (365-455)||(47340079-47340169)
chr4 (408-477)||(15781071-15781140)
chr4 (108-152)||(36392991-36393035)
chr4 (298-474)||(15781125-15781303)
chr4 (298-418)||(43265520-43265642)
chr4 (302-462)||(43264538-43264702)
chr4 (104-164)||(36227496-36227557)
chr4 (111-162)||(43263809-43263860)
chr4 (407-477)||(43265465-43265535)
[»] chr3 (21 HSPs)
chr3 (301-462)||(11762942-11763105)
chr3 (335-462)||(51858080-51858209)
chr3 (312-477)||(49791182-49791349)
chr3 (303-459)||(49791818-49791976)
chr3 (298-477)||(11763457-11763638)
chr3 (298-394)||(51858227-51858324)
chr3 (334-437)||(11763141-11763246)
chr3 (334-477)||(11763825-11763970)
chr3 (298-462)||(51857856-51858024)
chr3 (298-472)||(11763623-11763799)
chr3 (298-418)||(49791002-49791124)
chr3 (298-477)||(11762773-11762954)
chr3 (298-437)||(49790819-49790957)
chr3 (334-477)||(11763327-11763472)
chr3 (362-475)||(11762651-11762764)
chr3 (407-484)||(11763236-11763313)
chr3 (334-418)||(49791651-49791737)
chr3 (382-477)||(49791733-49791828)
chr3 (407-477)||(49790947-49791017)
chr3 (114-166)||(51857242-51857295)
chr3 (429-477)||(51857823-51857871)
[»] scaffold0049 (9 HSPs)
scaffold0049 (298-462)||(5034-5200)
scaffold0049 (298-462)||(4848-5016)
scaffold0049 (298-462)||(5218-5386)
scaffold0049 (299-422)||(5742-5867)
scaffold0049 (298-399)||(5404-5507)
scaffold0049 (312-417)||(5604-5711)
scaffold0049 (329-418)||(5939-6030)
scaffold0049 (298-462)||(29091-29256)
scaffold0049 (314-477)||(4696-4863)
[»] scaffold0031 (6 HSPs)
scaffold0031 (298-460)||(82169-82333)
scaffold0031 (324-426)||(83987-84091)
scaffold0031 (362-462)||(84377-84476)
scaffold0031 (408-471)||(84257-84320)
scaffold0031 (298-351)||(82096-82149)
scaffold0031 (312-350)||(81931-81969)
[»] scaffold0268 (4 HSPs)
scaffold0268 (298-459)||(5253-5416)
scaffold0268 (298-470)||(5937-6110)
scaffold0268 (298-351)||(5179-5232)
scaffold0268 (312-384)||(4978-5052)


Alignment Details
Target: chr6 (Bit Score: 121; Significance: 9e-62; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 320 - 477
Target Start/End: Original strand, 639397 - 639556
Alignment:
Q  320 ttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaa 417  Q
    |||||||||||||||||||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  639397 ttcaaagatttcaaaacgactgttcaaacttacaactcttaccctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaa 639496  T
Q  418 actctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  639497 actctctattgactaatcaagcttacaactttcaccctaatgacaagattcttcgaccta 639556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 299 - 459
Target Start/End: Original strand, 639210 - 639372
Alignment:
Q  299 agattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaat 396  Q
    |||||||| ||| ||  ||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  639210 agattctttgacctagcctaattcaaagatttcaaaacgactgatcaaactcataactcttaccctaactgaaagaatcttgtagtcaaagtacttgaat 639309  T
Q  397 gaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatg 459  Q
    |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  639310 gaatgttcaacgactaatcaaactctctatcgactaatcaagcgtacaactctcaccctaatg 639372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 270 - 477
Target Start/End: Original strand, 638663 - 638872
Alignment:
Q  270 gcattacagttaacatggaatccactgaaagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactg 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| ||||||  ||||||||||||  ||||||| |||| |||    
T  638663 gcattacagttaacatggaatccactgaaagattcttcgacataaactacttccaaaattttaaaacgggtgatcaaactcacaactcttaccctatctg 638762  T
Q  368 aaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtatt 467  Q
    |||||||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| |||| ||||||||||||||||||||||||||  ||||||  |||    
T  638763 aaagaatcgtgtagtcaaagtagttggatgaatgttcaacgactgatcaaaatctttatcgactaatcaagcttacaactctcacccagatgacaagatt 638862  T
Q  468 cttcgaccta 477  Q
     |||||||||    
T  638863 attcgaccta 638872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 638423 - 638562
Alignment:
Q  30 gaggaaagggagttgtgttttgttgatttgtgagaaaagagagggtnnnnnnntggg-gggagactgnnnnnnnngagcgcgttgataatttttgggaag 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||        |||||||||||||||||||||||||    
T  638423 gaggaaagggagttgtgttttgttgatttgtgagaaaagagagggtaaaaaaatgggagggagactgaaaaaaa-gagcgcgttgataatttttgggaag 638521  T
Q  129 agggaaacgaaaatgtgaaaattatagggggaaaatgtgaa 169  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  638522 agggaaacgaaaatgtgaaaattatagggggaaaatgtgaa 638562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 477
Target Start/End: Original strand, 1578063 - 1578241
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| | ||||||| |||||||  ||||| |||  ||||||| || ||||||||||||||||||||||||||||||| ||||    
T  1578063 attcttcgacctaaactacttccatgatttcataacgactcttcaaagtcacaactcttaccccaactgaaagaatcttgtagtcaaagtacttggatga 1578162  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| | ||||||||||| ||| || | |||||||||||||| |||||| |||||||| |||  |||||||||||||    
T  1578163 atgttcaatgactaatcaaattctttaccgactaatcaagcttaaaactctaaccctaataacaagattcttcgaccta 1578241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 1578226 - 1578407
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||||| | || ||||  |||||||||  |||||||||| ||||||||||||| ||||||||||||||||| |    
T  1578226 aagattcttcgacctaaactacttccaagattttagaatgactcttcaaactcacaactcttatcccaactgaaagaatcatgtagtcaaagtacttgga 1578325  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| | ||||||||||||||| || | |||||||||||||| ||  ||  ||||||||||   |||||||||||||    
T  1578326 tgaatgttcaatgactaatcaaactctttaccgactaatcaagcttaaaatgctgcccctaatgaccaaattcttcgaccta 1578407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 7655601 - 7655421
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||| | | |||| ||||||  |||||||||||||||||  ||||||  |||| |||||||||||||| |||||||||||||| ||||    
T  7655601 attcttcgacctaaacgaatacaaatatttcatcacgactgatcaaactcacaactcttgccctagctgaaagaatcttggagtcaaagtacttggatga 7655502  T
Q  399 atgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | |||||| || ||||||||||||   |||| ||||| ||||||||||||||| ||||||||||||  |||||||||||||    
T  7655501 acgttcgatgagtaatcaaactcttgttatcgactaaccaagcttacaactctaaccctaatgacaacattcttcgaccta 7655421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 301 - 462
Target Start/End: Original strand, 34961899 - 34962064
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||| ||| ||||||| ||||||||| |||  |||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||  ||||    
T  34961899 attctttgacttaaactaattcaaagatgtcagcacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtactttgatga 34961998  T
Q  399 atgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    | |||| | |||||||||||||||   |||| ||||| ||| |||||||||||||||||| |||||    
T  34961999 acgttcaatgactaatcaaactcttgttatcgactaaccaaacttacaactctcaccctactgaca 34962064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 477
Target Start/End: Original strand, 639710 - 639888
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaactcttat--cctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| || |||  ||| ||||| ||  ||| ||||||||||||||  ||| ||  ||||||||||||||||||| |||||||||||||| ||||    
T  639710 attcttcgacctagactgcttctaagatgtcggaaccactgatcaaactcacatctcattccctaactgaaagaatcttggagtcaaagtacttggatga 639809  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | |||| | ||||||||||||| | |||  |||||| |||||||||||||||||||||||||||  |||||| ||||||    
T  639810 acgttcaatgactaatcaaactttttattgactaattaagcttacaactctcaccctaatgacaagattctttgaccta 639888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 350 - 477
Target Start/End: Original strand, 1577949 - 1578075
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||  ||| ||||||||||||||||||| ||||||||  ||||||||||| | ||||||||||| ||| |||| |||||||||||||| ||||||    
T  1577949 caactctttccctcactgaaagaatcttgtagtgaaagtactcaaatgaatgttcaatgactaatcaaattctttatcgactaatcaagctta-aactct 1578047  T
Q  450 caccctaatgacagtattcttcgaccta 477  Q
     |||||||||||| ||||||||||||||    
T  1578048 aaccctaatgacaatattcttcgaccta 1578075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 2190981 - 2190815
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||| ||||||||||| |  |    
T  2190981 aagattcttcgacctaaactacttctaagatttcaaaacgactgatcaaactcgcaactcttaccctaacttaaagaatattggagtcaaagtacgttca 2190882  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |  | |||||||||||||  || |||| | |||||| |||||||| | ||||||||||||||    
T  2190881 tgaacggccaacgactaatcaaagactttatcgattaatcaggcttacaagtatcaccctaatgaca 2190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 458
Target Start/End: Original strand, 30405493 - 30405654
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||| ||| ||||||| ||||||||||  ||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  30405493 attcttcgacctaaactaattcgaagatgtcacaacgactaatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttggatga 30405592  T
Q  399 atgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaat 458  Q
    | |||| | ||||||||||||| |   |||| ||||| ||||||||||| ||| ||||||||    
T  30405593 acgttcaatgactaatcaaactattgttatcgactaaccaagcttacaaatctaaccctaat 30405654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 305 - 477
Target Start/End: Original strand, 29616496 - 29616672
Alignment:
Q  305 ttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgt 402  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||| ||||| |||||||| ||||| ||    
T  29616496 ttcgacctaaactacttccaagatttcaaaacgactgatcaaactcacaactcttaccctaactaaaagaatcttggagtcagagtacttggatgaacgt 29616595  T
Q  403 tcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    || | ||| |||||||||||   |||| | ||| ||| ||||||| ||| ||||||||||||  ||| |||||||||    
T  29616596 tcaatgaccaatcaaactcttgttatcgaataaccaaacttacaaatctaaccctaatgacaagatttttcgaccta 29616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 477
Target Start/End: Original strand, 12600759 - 12600938
Alignment:
Q  300 gattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaa--ctcttatcctaactgaaagaatcttgtagtcaaagtacttgaatg 397  Q
    ||||||| ||| ||||||| ||| ||||| ||| || |||||||||||||||   |||||| | ||||||||||||||||||||||||||||||||||||    
T  12600759 gattctttgacctaaactacttccaagatgtcataatgactgatcaaactcacagctcttaccataactgaaagaatcttgtagtcaaagtacttgaatg 12600858  T
Q  398 aatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||| | ||||||||||| | |  | | |||| ||||  ||||||||||||  |||||||||  |||||| ||||||    
T  12600859 aatgttcaatgactaatcaaatttttcaccgactattcaaatttacaactctcaagctaatgacaagattctttgaccta 12600938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 301 - 477
Target Start/End: Original strand, 1577741 - 1577919
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||||||||| ||| |||||||  | |||||||  |||||||   ||||||||||||||||| ||| ||||| ||  |||||    
T  1577741 attcttcaacctaaactacttcaaagatgtcagaacgactcttgaaactcacaactcttactttaactgaaagaatcttgcagtgaaagtgctcaaatga 1577840  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| | ||||||||||||||| || | |||||||||||||| || ||| ||||||||||||  |||||||||||||    
T  1577841 atgttcaatgactaatcaaactctttaccgactaatcaagcttaaaaatctaaccctaatgacaacattcttcgaccta 1577919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 639541 - 639722
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||  ||||| ||| |||||  ||| |||||||  || |||| |||||||||||||||| || ||| |||||||||  |    
T  639541 aagattcttcgacctaaactacttacaagatgtcagaacgatcgattaaactcacaacgcttaccctaactgaaagaatcctgcagttaaagtactttga 639640  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | ||||||| | ||||||| | | | |  ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  639641 ttaatgttcaatgactaataacaattttaatcgactaatcaatcttacaactctcaccctaatgacagtattcttcgaccta 639722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 458
Target Start/End: Original strand, 34961370 - 34961534
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||  ||||||| | |||||| || | ||||||||||||||||||  ||||||| ||||||| ||||||||||| | |||||||||||| |    
T  34961370 aagattctttgaactaaactactacaaagactttagaacgactgatcaaactcacaactcttaccctaactaaaagaatcttggaatcaaagtacttgga 34961469  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaat 458  Q
    |||| |||| | |||||||||||||||   |||| ||||| |||||||||| |||||||||||||    
T  34961470 tgaacgttcaatgactaatcaaactcttgttatcgactaaccaagcttacacctctcaccctaat 34961534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 462
Target Start/End: Original strand, 30404955 - 30405119
Alignment:
Q  302 ttcttcgacataaactatttcaaagatttcaa-aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||| ||| |||||||  |||||||| |||| ||||||| |||| |||||  ||||||| |||||||||||||||| || |||||||||| ||| || |    
T  30404955 ttcttagacctaaactaaatcaaagatgtcaataacgacttatcagactcacaactcttaccctaactgaaagaatcatggagtcaaagtagttggatca 30405054  T
Q  399 atgttcgacgactaatcaaactctct-atcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||| |||| ||||||||||||||| | ||| |||||||||||||  |||||||||||||||||||    
T  30405055 atgatcgatgactaatcaaactctttaatcgactaatcaagcttgtaactctcaccctaatgaca 30405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 312 - 462
Target Start/End: Original strand, 34961724 - 34961878
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| |||||| || ||| |||| |||||||||||  ||||| ||| ||||||| ||||||||||| |||||||||||||| | |||||||  | ||    
T  34961724 taaactacttcaaatatgtcataacggctgatcaaacttacaactattaccctaactaaaagaatcttggagtcaaagtacttggaggaatgttaaatga 34961823  T
Q  410 ctaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||||||||||||   |||| ||||| || |||||||||||||||||||||||||    
T  34961824 ctaatcaaactcttgttatcgactaaccacgcttacaactctcaccctaatgaca 34961878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 322 - 462
Target Start/End: Original strand, 640082 - 640224
Alignment:
Q  322 caaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaac 419  Q
    ||||||||||||||||||| ||||||||||  ||||||| | ||| || |||||||||| |||||||||||||| | |||||||| | ||||||||||||    
T  640082 caaagatttcaaaacgactcatcaaactcacaactcttaccttaattggaagaatcttgaagtcaaagtacttggacgaatgttcaatgactaatcaaac 640181  T
Q  420 tctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||| || | ||||||||||| |  |||||| ||||||| ||||    
T  640182 tctttaacgactaatcaagcctgtaactctaaccctaacgaca 640224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 334 - 477
Target Start/End: Original strand, 1577608 - 1577753
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    |||||||||||| |||||  ||||||| |||||||||||||||||| |||| ||||||||  ||  ||||||| | ||||||||||||||| || | |||    
T  1577608 aacgactgatcagactcacaactcttaccctaactgaaagaatcttatagtgaaagtactcaaacaaatgttcaatgactaatcaaactctttaccgact 1577707  T
Q  432 aatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||||| ||||||  || |||||||| |||||||| |||||    
T  1577708 aatcaagcttaaaactctagccataatgacaatattcttcaaccta 1577753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 454
Target Start/End: Original strand, 639026 - 639183
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| || |||| ||| ||||| ||| ||| ||||||||| ||  ||||||||| |||||||||||||| | || ||||| |||||||| ||||    
T  639026 attcttcgacctagactacttctaagatgtcagaaccactgatcaatcttacaactcttaccctaactgaaagaaacatggagtcagagtacttggatga 639125  T
Q  399 atgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccc 454  Q
    | |||| |||||||||||||||||   |||| ||||| ||||||||||||| ||||||    
T  639126 acgttcaacgactaatcaaactcttgttatcgactaaccaagcttacaactatcaccc 639183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 24037032 - 24037198
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| || |||| ||| |||||||||||||||||||| |||||  ||||||||| || |||| ||||||| ||| ||||||||||| |  |    
T  24037032 aagattcttcgacctagactacttctaagatttcaaaacgactgattaaactcgcaactcttaccccaacttaaagaatattggagtcaaagtacgttca 24037131  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |  | |||||||||||||  || |||| | |||||| |||||||| | ||||||||||||||    
T  24037132 tgaacgaccaacgactaatcaaagactttatcgattaatcaggcttacaagtatcaccctaatgaca 24037198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 34961204 - 34961370
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||| ||| || ||||| | |||||||  ||||||| | | | |||||| |||||| |||||||||||||| |    
T  34961204 aagattcttcgacttaaactacttccaagatgtcataatgactggtgaaactcacaactcttaccattaatgaaagtatcttggagtcaaagtacttgga 34961303  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||  ||| | ||||||||||||| | |||| ||||| ||||||||||| ||| ||||||||||||    
T  34961304 tgaacattctatgactaatcaaactatttatcgactaaccaagcttacaattctaaccctaatgaca 34961370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 12600923 - 12601092
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatctt---gtagtcaaagtactt 392  Q
    ||||||||| ||| ||||||| ||| ||||| | | ||||||||||||||||||  |||||||  |||||||||||||| ||   ||| | |||||||||    
T  12600923 aagattctttgacctaaactacttccaagatgttataacgactgatcaaactcacaactcttactctaactgaaagaatattattgtattgaaagtactt 12601022  T
Q  393 gaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    | |||||||||| | || |||||||| | |  | | ||||||||||| ||||||||||||||||||||||    
T  12601023 ggatgaatgttcaatgaataatcaaattgttcaccgactaatcaagcatacaactctcaccctaatgaca 12601092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 460
Target Start/End: Original strand, 34962082 - 34962248
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| ||| ||||||| | |||||| |||||||||  ||||||||| |||||| |||||||| | | |||||||||||||| |    
T  34962082 aagattctttgacttaaactacttctaagattttagaacgaccgatcaaacttacaactcttaccctaaccgaaagaatttgggagtcaaagtacttgga 34962181  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatga 460  Q
    |||| |||  |  ||||||||||||||   |||||| ||| ||||||||||| ||| ||||||||||    
T  34962182 tgaacgtttaattactaatcaaactcttgttatcaaataaccaagcttacaaatctaaccctaatga 34962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 312 - 420
Target Start/End: Original strand, 30405690 - 30405800
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| ||| ||||| ||| ||||||| ||||||||  ||||||||| ||||||||||||||||||| || ||||||||||| ||||| |||| | ||    
T  30405690 taaactaattcgaagatgtcacaacgactaatcaaactgacaactcttaccctaactgaaagaatcttggaggcaaagtacttggatgaacgttcaatga 30405789  T
Q  410 ctaatcaaact 420  Q
    |||||||||||    
T  30405790 ctaatcaaact 30405800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 477
Target Start/End: Original strand, 638916 - 639038
Alignment:
Q  355 cttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccc 454  Q
    |||| ||||||| ||| ||||||| |||||||||||||  ||| ||||||  |||||| | | | | |  ||| ||||||||| ||||||||||||||||    
T  638916 cttaccctaactaaaataatcttgcagtcaaagtactttgatggatgttcagcgactagtaacaattttaatcgactaatcaatcttacaactctcaccc 639015  T
Q  455 taatgacagtattcttcgaccta 477  Q
    |||||||||||||||||||||||    
T  639016 taatgacagtattcttcgaccta 639038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 29616118 - 29616212
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtac 390  Q
    |||| |||| ||| ||||||| |||||| |||||||||||||| ||||||||  ||||||||| ||||||| ||||||||||| |||||||||||    
T  29616118 aagaatctttgacctaaactaattcaaatatttcaaaacgacttatcaaactcacaactcttaccctaactaaaagaatcttggagtcaaagtac 29616212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 401
Target Start/End: Original strand, 30404769 - 30404870
Alignment:
Q  302 ttcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaa 399  Q
    ||||| ||| ||||||| |||||| |||||||||| ||| ||||||||||  ||||||| ||||||||||||||||||| || || |||||||| |||||    
T  30404769 ttcttagacctaaactaattcaaatatttcaaaacaacttatcaaactcacaactcttaccctaactgaaagaatcttggaggcagagtacttggatgaa 30404868  T
Q  400 tg 401  Q
    ||    
T  30404869 tg 30404870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 462
Target Start/End: Complemental strand, 7655786 - 7655622
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||| ||||| ||||||| | |||| ||||||   ||||||||||||||||  ||||||  |||| |||||||||||||| ||| |||||||||| ||||    
T  7655786 attcatcgacctaaactaatacaaatatttcatctcgactgatcaaactcacaactcttgccctagctgaaagaatcttggagtgaaagtacttggatga 7655687  T
Q  399 atgttcgacgactaatcaaactc-tctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    | ||||   || ||||||||||| | |||| ||||| ||||||||||||||  ||||| ||||||    
T  7655686 acgttcactgagtaatcaaactcttttatcgactaaacaagcttacaactccaaccctgatgaca 7655622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 34967725 - 34967817
Alignment:
Q  332 aaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactct 422  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||||| |||||||||||||  ||||| |||| | || ||||||||||||    
T  34967725 aaaacgactgatcaaacttacaactattaacctaactgaaagaatcttggagtcaaagtacttacatgaacgttcaatgaataatcaaactct 34967817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 411 - 474
Target Start/End: Original strand, 34961153 - 34961216
Alignment:
Q  411 taatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgac 474  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| |||  ||||||||||    
T  34961153 taatcaaactctttatcgactaatcaagcttacaactctcaccctaattacaagattcttcgac 34961216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 34964620 - 34964798
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatg 397  Q
    ||||||||| ||| ||||||| | |||||| ||||| || ||||||||||| || |||||| ||||||| ||| ||| ||  ||| |||||||||| |||    
T  34964620 aagattctttgacctaaactactacaaagacttcaacacaactgatcaaacaca-ctcttaacctaactaaaataattttagagttaaagtacttggatg 34964718  T
Q  398 aatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    || ||||   ||||||||||||| | |||  ||||| ||||||| | ||||| |||||| |||||  |||||| ||||||    
T  34964719 aacgttcactgactaatcaaactatttattgactaaccaagcttgctactctaaccctactgacaagattctttgaccta 34964798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 639873 - 640040
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| |||  || |||||||||||| ||||||||||||||||||  |||||||| || ||||||||||||| |  || || |||||||| |    
T  639873 aagattctttgacctaacttacttcaaagatttcgaaacgactgatcaaactcaaaactctta-cccaactgaaagaatcctagagacagagtacttgga 639971  T
Q  396 tgaatgttcgacgactaatcaaactctc--tatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| | ||    |||||||||||||||  |||| ||||| |||||||||| |||| ||||||| ||||    
T  639972 tgaacgatcacttactaatcaaactctcgttatcgactaaccaagcttacacctctgaccctaacgaca 640040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 29616657 - 29616734
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaa 373  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||| |||||  ||||||||| ||||||||||||||    
T  29616657 aagatttttcgacctaaactacttccaagatttcaaaacgactgatgaaactcacaactcttaccctaactgaaagaa 29616734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 360 - 462
Target Start/End: Original strand, 34961608 - 34961710
Alignment:
Q  360 cctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatg 459  Q
    ||||||| ||||||||||| ||| |||||||||| || ||||||| | |||||||| |||| | |||  ||||||||| |||| |||||| |||||||||    
T  34961608 cctaactaaaagaatcttggagtgaaagtacttggataaatgttcaatgactaatccaactatttattgactaatcaatcttagaactcttaccctaatg 34961707  T
Q  460 aca 462  Q
    |||    
T  34961708 aca 34961710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 462
Target Start/End: Original strand, 24036091 - 24036253
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| |||||||| | ||| ||||| ||| ||| ||| |||||| |||  |||||||   ||||||||||| |||||||| ||||||||||| ||||    
T  24036091 attcttcaacataaacaacttccaagatgtcataacaactaatcaaattcacaactcttactataactgaaaga-tcttgtagacaaagtacttggatga 24036189  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||||| | ||||||||||| | |  | | |||||||||  | |||||||||| ||||||||||    
T  24036190 atgttcaatgactaatcaaatttttcaccgactaatcaaattaacaactctcaacctaatgaca 24036253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 312 - 417
Target Start/End: Original strand, 30405133 - 30405240
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| | |||||| |||| ||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||| || ||||| ||||   ||    
T  30405133 taaactactacaaagacttcagaacgactaatcaaactcacaactcttaccctaactaaaagaatcttggagtcaaagtacatggatgaacgttcattga 30405232  T
Q  410 ctaatcaa 417  Q
    ||||||||    
T  30405233 ctaatcaa 30405240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 2190617 - 2190543
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtca 384  Q
    ||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| ||||||| ||| |||||    
T  2190617 taaactaattcaaagattttaaaacgactgatcaaactcacaactcttaccctaacttaaagaatattggagtca 2190543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 2190797 - 2190631
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||||  |||||||   | |||||  |||||||||  ||||| | || ||| |    
T  2190797 aagattctttcacctaaactacttcaaagatttcaaaacgactgatcaaactcacaactctagccttaacttcaagaatcttcgagtcagactaattgga 2190698  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| | ||   ||||||||||| ||| |||| ||||| ||||| | ||||| | ||||||||||||    
T  2190697 tgaacgatcactgactaatcaaagtctttatcgactaaccaagccttcaactataaccctaatgaca 2190631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 420
Target Start/End: Original strand, 30401570 - 30401680
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| ||| ||||| ||| ||||||| |||||| |||  ||||||| || |||||||||||| ||| |||||||||| ||| |||||||||| |  |    
T  30401570 taaactaattcgaagatgtcacaacgactaatcaaaatcacaactcttaccccaactgaaagaatgttggagtcaaagtatttggatgaatgttcaatca 30401669  T
Q  410 ctaatcaaact 420  Q
    |||||||||||    
T  30401670 ctaatcaaact 30401680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 7655954 - 7655774
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| |||| || | |||| ||||||  ||||||  |||||||||  |||||   |||| || || |||||||| |||||||||||||| ||||    
T  7655954 attcttcgacctaaaataatacaaatatttcatcacgacttgtcaaactcacaactctggccctagctaaaggaatcttggagtcaaagtacttggatga 7655855  T
Q  399 atgttcgacgactaatcaaactctc--tatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | ||||   || ||||||||||||   |||| ||||| ||||||||||||||| ||||||||| ||  |||| ||||||||    
T  7655854 acgttcactgagtaatcaaactcttgttatcgactaaccaagcttacaactctaaccctaatggcaacattcatcgaccta 7655774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 30405308 - 30405412
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||  | ||||| |||||  ||| |||||||||||||  ||||||| ||||||||||||||||||| ||||||||||| || ||||    
T  30405308 attcttcgacctaaacttatacaaag-tttcatcacggctgatcaaactcacaactcttagcctaactgaaagaatcttggagtcaaagtacctggatga 30405406  T
Q  399 atgttc 404  Q
    | ||||    
T  30405407 aggttc 30405412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 471
Target Start/End: Original strand, 24036034 - 24036097
Alignment:
Q  408 gactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    ||||||||||||||| || | |||||||||||||||| |||||| |||||| ||| ||||||||    
T  24036034 gactaatcaaactctttaccgactaatcaagcttacagctctcaacctaataacaatattcttc 24036097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 471
Target Start/End: Complemental strand, 2191907 - 2191845
Alignment:
Q  409 actaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    |||||||||||||| || | ||||||||||||||||||||||| |||||| |||  |||||||    
T  2191907 actaatcaaactctttaccgactaatcaagcttacaactctcaacctaataacaagattcttc 2191845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 2192181 - 2192076
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||| ||||||||||||||| | |||||||||  || ||||  ||||||||||||||| ||| ||||||| ||| || ||||    
T  2192181 attcttccacctaaactacttcgaagatttcaaaacgaataatcaaactcaaaattcttgccctaactgaaagaatattggagtcaaactacctgcatga 2192082  T
Q  399 atgttc 404  Q
    | ||||    
T  2192081 acgttc 2192076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 462
Target Start/End: Complemental strand, 7656104 - 7655975
Alignment:
Q  336 cgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactc-tctatcaacta 432  Q
    ||||||||||||||||  ||||||  |||| ||||||||| |||| |||||||||||||| ||||| ||||   || ||||||||||| | |||  ||||    
T  7656104 cgactgatcaaactcacaactcttgccctagctgaaagaaccttggagtcaaagtacttggatgaacgttcactgagtaatcaaactcttttattgacta 7656005  T
Q  433 atcaagcttacaactctcaccctaatgaca 462  Q
    | ||||||||||| |   ||||||||||||    
T  7656004 aacaagcttacaaatacaaccctaatgaca 7655975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 24035761 - 24035866
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||| ||||||||||||||| | |||||||||  || ||||  ||||||||||||||| ||| ||||||| ||| || ||||    
T  24035761 attcttccacctaaactacttcgaagatttcaaaacgaataatcaaactcaaaattcttgacctaactgaaagaatattggagtcaaactacctgcatga 24035860  T
Q  399 atgttc 404  Q
    | ||||    
T  24035861 acgttc 24035866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 420
Target Start/End: Original strand, 29616307 - 29616427
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||  |||||||||||||||||| |||||||||  |||||||  | | ||| |||||| ||| ||| |||||||||||| ||    
T  29616307 attcttcgacctaaactacttacaagatttcaaaacgactggtcaaactcacaactcttactc-agctggaagaatattggagttaaagtacttgaacga 29616405  T
Q  399 atgttcgacgactaatcaaact 420  Q
    | | || | |||||||||||||    
T  29616406 acgctcaatgactaatcaaact 29616427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 391
Target Start/End: Complemental strand, 7655433 - 7655341
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtact 391  Q
    |||||||||| ||||||| | |||| ||||||  |||||||||||||||  ||||||||   ||| || ||||||||||| ||||||||||||    
T  7655433 attcttcgacctaaactaatacaaatatttcatcacgactgatcaaactcacaactcttgctctagcttaaagaatcttggagtcaaagtact 7655341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 24037396 - 24037434
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactc 350  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  24037396 taaactaattcaaagatttcaaaacgactgatcacactc 24037434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 462
Target Start/End: Complemental strand, 2191778 - 2191689
Alignment:
Q  373 atcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||| |||||||||||  ||||||||| | ||||||||||| | |  | | |||||||||  | |||||||||| ||||||||||    
T  2191778 atcttgtagacaaagtacttgggtgaatgttcaatgactaatcaaatttttcaccgactaatcaaattaacaactctcaacctaatgaca 2191689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 29615978 - 29616039
Alignment:
Q  361 ctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactct 422  Q
    |||||||||||||||||| | |||||||| ||| || |||| | || |||||||||||||||    
T  29615978 ctaactgaaagaatcttggactcaaagtagttggatcaatgattgatgactaatcaaactct 29616039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 29616045 - 29616098
Alignment:
Q  407 cgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatga 460  Q
    ||||||||| |||| |||||| ||||| ||||||||||| ||| ||||||||||    
T  29616045 cgactaatccaactatctatcgactaaccaagcttacaaatctaaccctaatga 29616098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 24035952 - 24036023
Alignment:
Q  363 aactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaa 437  Q
    |||||||| ||||||| ||  ||||||||||   ||| |||| | ||||||||||||||| ||||||||||||||    
T  24035952 aactgaaataatcttgcagcgaaagtacttg---gaacgttcaatgactaatcaaactctttatcaactaatcaa 24036023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 7e-44; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 306 - 477
Target Start/End: Complemental strand, 24665843 - 24665670
Alignment:
Q  306 tcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgtt 403  Q
    ||||| ||||||| ||||||||||||| ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||||| || |||||     
T  24665843 tcgacctaaactacttcaaagatttcagaacgactcatcaaactcacaactcttagcctaactgaaagaatcttgtagtcaaagtacttggataaatgta 24665744  T
Q  404 cgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
      | ||||||||||||||| |||| ||||||||| |||| |||||| ||||||||||||  |||||||||||||    
T  24665743 taatgactaatcaaactctttatcgactaatcaaacttaaaactctaaccctaatgacaaaattcttcgaccta 24665670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 320 - 462
Target Start/End: Original strand, 48739610 - 48739756
Alignment:
Q  320 ttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaa 417  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||| |||||||||||||| ||||| ||||   ||||||||||    
T  48739610 ttcaaagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagagtcttggagtcaaagtacttggatgaacgttcactgactaatcaa 48739709  T
Q  418 actct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||||   |||| ||||| ||||||||||||||| ||||||||||||    
T  48739710 actcttgttatcgactaaccaagcttacaactctaaccctaatgaca 48739756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 298 - 477
Target Start/End: Complemental strand, 24665519 - 24665338
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||||||| ||| | |   ||||||  ||||||||| ||  ||| ||||||||||| ||| |||||||||| |    
T  24665519 aagattcttcgacctaaactacttccaagatttcagaacaaatccacaaactcacaactcttaccccgactaaaagaatcttgcagtgaaagtacttgga 24665420  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||||||| |||||| ||||||||||||  |||||||||||||    
T  24665419 tgaatgttcaacgactaatcaaattctttatcgactaatcaagcttaaaactctaaccctaatgacaagattcttcgaccta 24665338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 24665682 - 24665504
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||||||| ||| | | | ||||||||  ||||||| || |||| ||||||||||| ||| ||| |||||| ||||    
T  24665682 attcttcgacctaaactacttctaagatttcagaacaaatcaacaaactcacaactcttacccaaactaaaagaatcttgcagtgaaaatacttggatga 24665583  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| ||||||||||||| ||| |||| |||||||||||||| |||||| ||||| ||||||  |||||||||||||    
T  24665582 atgttcaacgactaatcaaattctttatcgactaatcaagcttaaaactctaaccctgatgacaagattcttcgaccta 24665504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 24666016 - 24665850
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||| ||| ||| ||||||||| ||||||||||||||||||  ||||||| | ||| ||||||||||| ||||| ||||||||||      
T  24666016 aagattcttcaacctaagctacttctaagatttcagaacgactgatcaaactcataactcttaccgtaattgaaagaatctagtagtgaaagtacttggg 24665917  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |||| | ||||||| ||||| | |||| |||||||||| |||||||||||||||||||||||    
T  24665916 tgaacgttcaatgactaatgaaactatttatcgactaatcaagattacaactctcaccctaatgaca 24665850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 48739420 - 48739588
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| || ||| ||| ||| ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||  |||||||||||||| |    
T  48739420 aagattttttgacctaacctaattcaaagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttcgagtcaaagtacttgga 48739519  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||  ||| | |||||||||||||||   || | ||||| ||||||||||| ||| ||||||| ||||    
T  48739520 tgaacattcaatgactaatcaaactcttgttagcgactaaccaagcttacaaatctaaccctaacgaca 48739588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 24666368 - 24666202
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||||||| ||||||| ||||||||||  ||||||| | ||||||| ||||||||| |||||||||||||| |    
T  24666368 aagattcttcgacctaaactacttccaagatttcagaacgactcatcaaactcacaactcttaccttaactgatagaatcttgcagtcaaagtacttgga 24666269  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |||| | |||||||| || | |  ||  ||||||||| |||  |||||| ||||||||||||    
T  24666268 tgaacgttcaatgactaatccaatttttaattgactaatcaaccttgaaactctaaccctaatgaca 24666202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 462
Target Start/End: Original strand, 48234384 - 48234498
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaac--tctctatcaactaatcaagcttacaact 447  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||||| |||| | ||||||||||||  | | |||| || || ||||||||||| |    
T  48234384 caactcttactctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaactttttttatccaccaaccaagcttacaagt 48234483  T
Q  448 ctcaccctaatgaca 462  Q
    |||||||||||||||    
T  48234484 ctcaccctaatgaca 48234498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 420
Target Start/End: Original strand, 41468435 - 41468556
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| | |||||||||||  |||||||||||||||  ||||||||  ||||||| ||||||||||| ||| |||||| ||| ||||    
T  41468435 attcttcgacctaaactaatacaaagatttcatcacgactgatcaaactcacaactcttgccctaactaaaagaatcttggagttaaagtaattggatga 41468534  T
Q  399 atgttcgacgactaatcaaact 420  Q
    ||||||   |||||||||||||    
T  41468535 atgttcattgactaatcaaact 41468556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 24666531 - 24666353
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||| ||||||||| ||||||| ||||||||||  ||||| | | ||||| ||| ||||||  |||||||||||||| ||||    
T  24666531 attcttcaacctaaactacttccaagatttcagaacgactcatcaaactcacaactctaaccttaactaaaaaaatcttagagtcaaagtacttggatga 24666432  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |  ||| | | |||||| || | |  ||| |||||||||||||||||||| ||||| ||| |||  |||||||||||||    
T  24666431 acattcaatgtctaatccaatttttaatcgactaatcaagcttacaactcccacccaaattacaagattcttcgaccta 24666353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 41468255 - 41468360
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| | |||||||||||  ||||||||| | |||||  ||||||  ||||||| ||||||||||| |||||||||||||| ||||    
T  41468255 attcttcgacctaaactaatacaaagatttcatcacgactgatgatactcacaactcttgccctaactaaaagaatcttggagtcaaagtacttggatga 41468354  T
Q  399 atgttc 404  Q
    | ||||    
T  41468355 acgttc 41468360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 398
Target Start/End: Original strand, 41468015 - 41468114
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||  ||||||| | |||||||||||  ||||||||| |||||||  ||||||  ||||||| ||||||||||| |||||||||||||| ||||    
T  41468015 attcttcgatctaaactaatacaaagatttcatcacgactgatgaaactcacaactcttgccctaactaaaagaatcttggagtcaaagtacttggatga 41468114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 24666067 - 24665994
Alignment:
Q  411 taatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgacctatgctact 484  Q
    |||||||| ||| |||| |||||||||||||| |||| | ||||||||||||  ||||||| ||||| ||||||    
T  24666067 taatcaaattctttatcgactaatcaagcttaaaactttaaccctaatgacaagattcttcaacctaagctact 24665994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 24666148 - 24666083
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatc 415  Q
    ||||||||| || |||||||||||||||  |||||||||||||| ||||| |||| | ||||||||    
T  24666148 caactcttaccccaactgaaagaatcttagagtcaaagtacttggatgaacgttcaatgactaatc 24666083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 48739777 - 48739852
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaat 374  Q
    |||||||||| ||||||| ||||||||| |||  ||||||||||||||||  || ||||| | |||||||||||||    
T  48739777 attcttcgacctaaactaattcaaagatgtcagcacgactgatcaaactcataattcttaccataactgaaagaat 48739852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 298 - 457
Target Start/End: Original strand, 35466796 - 35466957
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||| ||| ||||||| |||| |||||  ||||||| |||||||||||||||| || |||||||||||||| |    
T  35466796 aagattcttcgacctaaactacttccaagatgtcagaacgactcatcagactcagaactcttaccctaactgaaagaatcctgcagtcaaagtacttgga 35466895  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaa 457  Q
    ||||||||| | ||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  35466896 tgaatgttcaatgactaatcaaactttttatcgactaatcaagcttacaactctcaccctaa 35466957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 313 - 475
Target Start/End: Original strand, 13930366 - 13930530
Alignment:
Q  313 aaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgac 410  Q
    |||||| ||| ||||||||| ||||||| ||||||||||  ||||||| ||||||||||||||||||| |||||||||| ||  | |||||||| | |||    
T  13930366 aaactaattccaagatttcataacgactaatcaaactcagaactcttaccctaactgaaagaatcttggagtcaaagtatttagacgaatgttcaatgac 13930465  T
Q  411 taatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgacc 475  Q
    |||||||||| | ||||||||||||||||||||||||||||||| |||||||  |||||| ||||    
T  13930466 taatcaaactatttatcaactaatcaagcttacaactctcacccaaatgacaagattctttgacc 13930530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 15738312 - 15738134
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| | ||||||| |||||||  ||||| |||  ||||||| || ||||||||||||||||||||||||||||||| ||||    
T  15738312 attcttcgacctaaactacttccatgatttcataacgactcttcaaagtcacaactcttaccccaactgaaagaatcttgtagtcaaagtacttggatga 15738213  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| | ||||||||||| ||| || | |||||||||||||| |||||| |||||||| |||  |||||||||||||    
T  15738212 atgttcaatgactaatcaaattctttaccgactaatcaagcttaaaactctaaccctaataacaagattcttcgaccta 15738134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 298 - 477
Target Start/End: Complemental strand, 15738149 - 15737968
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||||| | || ||||  |||||||||  |||||||||| ||||||||||||| ||||||||||||||||| |    
T  15738149 aagattcttcgacctaaactacttccaagattttagaatgactcttcaaactcacaactcttatcccaactgaaagaatcatgtagtcaaagtacttgga 15738050  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| | ||||||||||||||| || | |||||||||||||| ||  ||  ||||||||||   |||||||||||||    
T  15738049 tgaatgttcaatgactaatcaaactctttaccgactaatcaagcttaaaatgctgcccctaatgaccaaattcttcgaccta 15737968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 35466630 - 35466811
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||||||||| ||| ||| ||| |||| |||||  ||||||| ||||||||||  || |||||||| |||||| ||| |    
T  35466630 aagattcttcgacctaaactacttcaaagatgtcataactactcatcagactcacaactcttaccctaactgaacaaaccttgtagtgaaagtatttgga 35466729  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||| |||| | ||||||||||||| | |||| ||||||||||||| |||||||| |||||||||||  |||||||||||||    
T  35466730 tgaacgttcaatgactaatcaaactatttatcgactaatcaagcttgcaactctcgccctaatgacaagattcttcgaccta 35466811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 298 - 463
Target Start/End: Original strand, 8948290 - 8948457
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| || |||||||||||  || ||||| |||  |||||||||||||||||  ||||||| ||||||||||||||| ||||| | |||||||||| |    
T  8948290 aagattttttgacataaactacatctaagatgtcatgacgactgatcaaactcacaactcttaccctaactgaaagaatattgtattgaaagtacttgga 8948389  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacag 463  Q
    ||||||||| | ||| ||||||||| |  | | ||||||||||| |||||||||||||||||||||||    
T  8948390 tgaatgttcaatgaccaatcaaactgttcaccgactaatcaagcatacaactctcaccctaatgacag 8948457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 334 - 462
Target Start/End: Original strand, 8948160 - 8948290
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    ||||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||||| | ||||||||||| | |  | | |||    
T  8948160 aacgactgatcaaactcacaactcttaccctaattgaaagaatcttgtagtcaaagtacttggatgaatgttcaatgactaatcaaatttttcaccgact 8948259  T
Q  432 aatcaagcttacaactctcaccctaatgaca 462  Q
    |||||| ||||||||||||| ||||||||||    
T  8948260 aatcaaacttacaactctcaacctaatgaca 8948290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 350 - 477
Target Start/End: Complemental strand, 15738426 - 15738300
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||  ||| ||||||||||||||||||| ||||||||  ||||||||||| | ||||||||||| ||| |||| |||||||||||||| ||||||    
T  15738426 caactctttccctcactgaaagaatcttgtagtgaaagtactcaaatgaatgttcaatgactaatcaaattctttatcgactaatcaagctta-aactct 15738328  T
Q  450 caccctaatgacagtattcttcgaccta 477  Q
     |||||||||||| ||||||||||||||    
T  15738327 aaccctaatgacaatattcttcgaccta 15738300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 8947295 - 8947424
Alignment:
Q  335 acgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaacta 432  Q
    |||||||||||||||||  ||||||| |||| ||||| |||||||| ||| |||||||||| ||||| |||| ||||||||| ||||| | |||||||||    
T  8947295 acgactgatcaaactcacaactcttaccctatctgaacgaatcttggagtgaaagtacttggatgaacgttcaacgactaataaaactatttatcaacta 8947394  T
Q  433 atcaagcttacaactctcaccctaatgaca 462  Q
    |||||||||| |||||||||| ||||||||    
T  8947395 atcaagcttaaaactctcaccttaatgaca 8947424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 8947090 - 8947273
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||| | ||||||| ||| || |||||| |||||||  |||||||||  ||||||||||||||||||||||||||| ||| |||||||||| |    
T  8947090 aagattcttcgtcctaaactacttccaaaatttcagaacgactcttcaaactcacgactcttatcctaactgaaagaatcttggagtaaaagtacttgga 8947189  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||| |||  | || ||||||||||||   |||||||||||||||| |  |||||| |||||||||||| |||| || ||||||    
T  8947190 tgaacgttaaatgattaatcaaactcttgttatcaactaatcaagcctgtaactctaaccctaatgacaatattttttgaccta 8947273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 462
Target Start/End: Complemental strand, 13910409 - 13910254
Alignment:
Q  309 acataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcga 406  Q
    |||||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||| ||||||||||| |  ||||| |  | |    
T  13910409 acataaactacttctaagatttcaaaacgactgatcaaactcacaactcttaccctaacttaaagaatattggagtcaaagtacgttgatgaacggccaa 13910310  T
Q  407 cgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||||||||||| ||| |||| | |||||| |||||||| | ||||||||||||||    
T  13910309 cgactaatcaaagtctttatcgattaatcaggcttacaagtatcaccctaatgaca 13910254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 320 - 477
Target Start/End: Original strand, 44213590 - 44213749
Alignment:
Q  320 ttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaa 417  Q
    ||||||||||||||||||||| ||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||| ||||| |||| | || |||||||    
T  44213590 ttcaaagatttcaaaacgactcatcaaactcataactcttaccctaactggaagaatcttgaggtcaaagtacttggatgaacgttcaatgattaatcaa 44213689  T
Q  418 actctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||| || | | ||||||||| |  |||||| ||||||| |||| || |||||||||||    
T  44213690 actctttaacgattaatcaagcctgtaactctaaccctaacgacaatagtcttcgaccta 44213749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 15738634 - 15738456
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||||||||| ||| |||||||  | |||||||  |||||||   ||||||||||||||||| ||| ||||| ||  |||||    
T  15738634 attcttcaacctaaactacttcaaagatgtcagaacgactcttgaaactcacaactcttactttaactgaaagaatcttgcagtgaaagtgctcaaatga 15738535  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| | ||||||||||||||| || | |||||||||||||| || ||| ||||||||||||  |||||||||||||    
T  15738534 atgttcaatgactaatcaaactctttaccgactaatcaagcttaaaaatctaaccctaatgacaacattcttcgaccta 15738456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 457
Target Start/End: Original strand, 35466962 - 35467123
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||| |||||| | ||||||| |||||| || | | ||||||| |||||||||  |||||||| |||||||||||||||||||||||||||||||||| |    
T  35466962 aagactcttcggcctaaactacttcaaacatgttagaacgactaatcaaactcgcaactcttaccctaactgaaagaatcttgtagtcaaagtacttgga 35467061  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaa 457  Q
    |||| |||| | || |||||||| | |  | | ||||||||||||||| |||||||||||||    
T  35467062 tgaacgttcaatgaataatcaaattgttcaccgactaatcaagcttaccactctcaccctaa 35467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 334 - 477
Target Start/End: Complemental strand, 15738767 - 15738622
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    |||||||||||| |||||  ||||||| |||||||||||||||||| |||| ||||||||  ||  ||||||| | ||||||||||||||| || | |||    
T  15738767 aacgactgatcagactcacaactcttaccctaactgaaagaatcttatagtgaaagtactcaaacaaatgttcaatgactaatcaaactctttaccgact 15738668  T
Q  432 aatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||||| ||||||  || |||||||| |||||||| |||||    
T  15738667 aatcaagcttaaaactctagccataatgacaatattcttcaaccta 15738622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 415
Target Start/End: Original strand, 8947442 - 8947560
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| || ||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| | | |||||||||| |    
T  8947442 aagattatttgacctaaactatttccaagatttcaaaacgactgatcaaactcacaactcttatcctaactgaaaaaatcttggactgaaagtacttg-a 8947540  T
Q  396 tgaatgttcgacgactaatc 415  Q
    |||| |||| | ||||||||    
T  8947541 tgaacgttcaatgactaatc 8947560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 462
Target Start/End: Complemental strand, 13914503 - 13914341
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||| ||||| ||||| | ||| ||||| ||| ||||||||||||||||||  ||||||| | ||||||||||| ||||||||| |||||||||| ||||    
T  13914503 attcatcgacttaaacaacttccaagatgtcataacgactgatcaaactcacaactcttaccataactgaaaga-tcttgtagttaaagtacttggatga 13914405  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||||| | ||||||||||| | |  | |||||||||||  | |||||||||| ||||||||||    
T  13914404 atgttcaatgactaatcaaatttttcaccaactaatcaaattaacaactctcaacctaatgaca 13914341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 13910236 - 13910070
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||  || ||||||| ||||||||||||||||||||| ||||||||  ||||||||| | ||||| ||||||||||| ||||| |||| ||| |    
T  13910236 aagattctttcacctaaactacttcaaagatttcaaaacgactaatcaaactcacaactcttaccttaacttaaagaatcttggagtcagagtaattgga 13910137  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| | ||   ||||||||||| ||| |||| ||||| ||||| | ||||| | ||||||||||||    
T  13910136 tgaacgatcactgactaatcaaagtctttatcgactaaccaagccttcaactataaccctaatgaca 13910070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 457
Target Start/End: Original strand, 35467131 - 35467289
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||  ||||||||| ||||||  | ||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||  ||||    
T  35467131 attcttcagcataaactacttcaaacgtgtcagaacgactgatcaaactcacaactcttatcctaactgaaagaatcttgcagtgaaagtacttagatga 35467230  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaa 457  Q
    | ||||   || |||||||| | |  | | ||||||||||||||| |||||||||||||    
T  35467231 aagttcattgaataatcaaattgttcaccgactaatcaagcttaccactctcaccctaa 35467289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 436
Target Start/End: Original strand, 8947607 - 8947747
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||||||||| | | |||||| || | |||||||||| ||||||||   || || ||||||| ||||||||||| ||| |||||||||| |    
T  8947607 aagattctttgacataaacaaatacaaagacttgagaacgactgattaaactcaaaattcgtaccctaactaaaagaatcttggagttaaagtacttgga 8947706  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatca 436  Q
    |||| |||| ||||||||||||||||| ||| |||||||||    
T  8947707 tgaacgttcaacgactaatcaaactctttattaactaatca 8947747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 8947793 - 8947959
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| |||   ||| ||  ||||||||||||||||||  ||||||| | |||||||||||||||| ||||||||||||||  |    
T  8947793 aagattcttcgacctaaactacttcctggatgtcgtaacgactgatcaaactcacaactcttaccttaactgaaagaatcttatagtcaaagtactttga 8947892  T
Q  396 tgaatgttcgacgactaatcaaa-ctctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||  | ||||| ||||| || || | | |||||| |||||||||| ||||| ||||||||||    
T  8947893 tgaatgtttaaagactagtcaaatctttc-accgactaataaagcttacaaatctcaacctaatgaca 8947959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 477
Target Start/End: Original strand, 35467297 - 35467475
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||  ||||||||| ||||||  | ||| ||||||||||||||||||  ||||||| ||||||||||||||||||  ||| |||||||||  ||||    
T  35467297 attcttcagcataaactacttcaaatgtgtcagaacgactgatcaaactcacaactcttaccctaactgaaagaatcttacagtgaaagtacttagatga 35467396  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | ||||   || |||||||| | |  |  |||||||||||||||| ||||| | ||||| ||||  |||||||||||||    
T  35467397 aagttcattgaataatcaaattgttcacaaactaatcaagcttaccactctaaacctaaagacaagattcttcgaccta 35467475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 384
Target Start/End: Complemental strand, 13910066 - 13909982
Alignment:
Q  302 ttcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtca 384  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||| ||| |||||    
T  13910066 ttctttgacctaaactaattcaaagatttcaaaacgactgatcaaactcataactcttaccctaacttaaagaatattggagtca 13909982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 8947740 - 8947808
Alignment:
Q  409 actaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||||| ||||| |||| ||||||||||||||||| ||||| ||||||||||  |||||||||||||    
T  8947740 actaatcatactctttatcgactaatcaagcttacaaatctcatcctaatgacaagattcttcgaccta 8947808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 474
Target Start/End: Complemental strand, 13914672 - 13914494
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||| ||||| ||| ||| ||| ||||||||||  ||||||| | |||| |||||||||||| |||||||||||||       
T  13914672 aagattcttcaacctaaactacttccaagatgtcataacaacttatcaaactcacaactcttaccttaaccgaaagaatcttggagtcaaagtacttagg 13914573  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgac 474  Q
    |||||||||   ||||||||| | | |  |   |||||| ||||||||||||| |  |||||||||| ||||| |||||    
T  13914572 tgaatgttcattgactaatcatatttttcacagactaataaagcttacaactcccgacctaatgacaatattcatcgac 13914494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 8947959 - 8948140
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| ||| || ||||||| ||| ||||| ||| ||||| ||||||||||||  ||| ||| |||||| |||| ||  ||||||| |||||||||  |    
T  8947959 aagattattcaacttaaactacttccaagatgtcataacgaatgatcaaactcacaacttttaccctaaccgaaaaaacattgtagttaaagtacttaga 8948058  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | || |||| | ||||||||||| | |  | | |||||| || ||||||||||||| ||||||||||  |||| ||||||||    
T  8948059 tcaacgttcaatgactaatcaaatttttcaccgactaataaaacttacaactctcaacctaatgacaagattcatcgaccta 8948140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 13914727 - 13914657
Alignment:
Q  407 cgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||||||||||||| || | ||||||||||||||||||||||| ||||| ||||  ||||||| |||||    
T  13914727 cgactaatcaaactctttaccgactaatcaagcttacaactctcaacctaaagacaagattcttcaaccta 13914657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 437
Target Start/End: Complemental strand, 13914861 - 13914737
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| ||||||||| | | ||  ||| ||||||||||  ||| ||| ||||||||||||||||||| ||| ||||||||||   ||| |||| | ||    
T  13914861 taaactacttcaaagatgttagaataactaatcaaactcacaacttttaccctaactgaaagaatcttgcagtaaaagtacttg---gaacgttcaatga 13914765  T
Q  410 ctaatcaaactctctatcaactaatcaa 437  Q
    ||||||||||||| |||| |||||||||    
T  13914764 ctaatcaaactctttatcgactaatcaa 13914737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 366
Target Start/End: Original strand, 13930517 - 13930587
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaact 366  Q
    ||||||||| |||  |||||| ||||||||| ||||||||||||||||||||  ||||||||| |||||||    
T  13930517 aagattctttgacccaaactacttcaaagatgtcaaaacgactgatcaaactcacaactcttaccctaact 13930587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 8946329 - 8946383
Alignment:
Q  105 agcgcgttgataatttttgggaagagggaaacgaaaatgtgaaaattataggggg 159  Q
    ||||| ||||||||||||| || ||||||||| ||||||||||||||||| ||||    
T  8946329 agcgctttgataatttttgagaggagggaaaccaaaatgtgaaaattatatgggg 8946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 420
Target Start/End: Original strand, 13930241 - 13930329
Alignment:
Q  334 aacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaact 420  Q
    |||||||||||||||||||   ||||| ||||||||| ||||  ||| ||| |||||||||| ||||| |||| | |||||||||||||    
T  13930241 aacgactgatcaaactcaaaattcttaccctaactgacagaactttggagtgaaagtacttggatgaacgttcaatgactaatcaaact 13930329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 13915018 - 13914913
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||  ||| ||||||||||||||| | |||||||||  || ||||  ||||||||||||||| ||| ||||||| ||| || ||||    
T  13915018 attcttccacctaaactccttccaagatttcaaaacgaataatcaaactcaaaattcttgccctaactgaaagaatattggagtcaaactacctgcatga 13914919  T
Q  399 atgttc 404  Q
    | ||||    
T  13914918 acgttc 13914913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Original strand, 13930318 - 13930351
Alignment:
Q  429 actaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  13930318 actaatcaaacttacaactctcaccctaatgaca 13930351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 324 - 474
Target Start/End: Complemental strand, 124144 - 123992
Alignment:
Q  324 aagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactc 421  Q
    ||||||||| ||||||||||||||||||  ||||||| ||| ||||||||||||||| ||| |||||||||| |||||||||| ||||||||||||| ||    
T  124144 aagatttcagaacgactgatcaaactcataactcttaccctgactgaaagaatcttgcagtgaaagtacttggatgaatgttcaacgactaatcaaattc 124045  T
Q  422 tctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgac 474  Q
    | |||| |||||||||||||| |||||| |||| |||||||  ||||||||||    
T  124044 tttatcgactaatcaagcttaaaactctaaccccaatgacaagattcttcgac 123992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 34907375 - 34907541
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||  ||||||||||||| | |||||||||||||   ||||  |||| |||||||||||||| |||||||||||||| |    
T  34907375 aagattcttccacctaaactacttacaagatttcaaaacaattgatcaaactcaaaattcttgccctacctgaaagaatcttggagtcaaagtacttgga 34907474  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||| | ||||||| ||||| | |||| ||||||||||||||||||||| ||||||||||||    
T  34907475 tgaatgttcaatgactaatgaaactatttatcgactaatcaagcttacaactctaaccctaatgaca 34907541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 298 - 460
Target Start/End: Original strand, 23484295 - 23484461
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||| | |||||| |    
T  23484295 aagattctttgacctaaactacttccaagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagtcagattacttgga 23484394  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatga 460  Q
    |||| | || | |||||||||||||||   |||||| ||| ||||||||||| ||| ||||||||||    
T  23484395 tgaacgctcaatgactaatcaaactcttgttatcaaataaccaagcttacaaatctaaccctaatga 23484461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 298 - 460
Target Start/End: Original strand, 23484481 - 23484647
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||| ||||| | |||||| |    
T  23484481 aagattcttcaacctaaactacttcaaagatttcaaaacgactgatctaactcacaactcttaccctaactgaaagaatcttggagtcagattacttgga 23484580  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatga 460  Q
    |||| | || | |||||||||||||||   |||||| ||| ||||||||||| ||| ||||||||||    
T  23484581 tgaacgctcaatgactaatcaaactcttgttatcaaataaccaagcttacaaatctaaccctaatga 23484647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 298 - 456
Target Start/End: Original strand, 23484667 - 23484829
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| || ||||||||||| |    
T  23484667 aagattcttcgacctaaactacttctaagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagacaaagtacttgga 23484766  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcacccta 456  Q
    |||| | ||    ||||||||||||||   |||| ||||| |||||||||| |||| ||||||    
T  23484767 tgaacgatcacttactaatcaaactcttgttatcgactaaccaagcttacacctctaacccta 23484829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 23483757 - 23483938
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||| ||||||| | ||| ||| ||||||||||  ||||||| ||||||| ||||||||||||||| |||||||||| |    
T  23483757 aagattcttcaacctaaactacttccaagattttagaacaactcatcaaactcataactcttaccctaactaaaagaatcttgtagttaaagtacttgga 23483856  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||| |||| | ||||||| |||   |  | | |||||||||||||| |||||||||||||||||||  |||||||||||||    
T  23483857 tgaaagttcaatgactaataaaaaattgaaccgactaatcaagcttaaaactctcaccctaatgacaaaattcttcgaccta 23483938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 32058845 - 32058698
Alignment:
Q  313 aaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgac 410  Q
    |||||| ||||||||| ||||||||||||||||||||||  ||||| | || |||||||||||||||| ||| |||||||||  ||||| |||| |  ||    
T  32058845 aaactacttcaaagatgtcaaaacgactgatcaaactcacaactctaaccccaactgaaagaatcttggagtaaaagtacttagatgaacgttcaattac 32058746  T
Q  411 taatcaaactctctatcaactaatcaagcttacaactctcaccctaat 458  Q
    ||||| |||| | |||| ||||| ||||||||||||||||||||||||    
T  32058745 taatccaactatttatcgactaaccaagcttacaactctcaccctaat 32058698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 462
Target Start/End: Complemental strand, 32059011 - 32058860
Alignment:
Q  313 aaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgac 410  Q
    |||||| ||| ||||||||| ||||||| | ||||||||  ||||||| ||||||||||||||||||  |||||||||||||  |  ||||||| | |||    
T  32059011 aaactaattccaagatttcataacgactaaacaaactcagaactcttaccctaactgaaagaatctttgagtcaaagtacttagacaaatgttcaatgac 32058912  T
Q  411 taatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||||||||| | |||| |||||||||||||||||||||| ||| |||||||    
T  32058911 taatcaaactatttatcgactaatcaagcttacaactctcgcccaaatgaca 32058860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 124744 - 124578
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||  || ||||||| ||| ||||||||| ||||||||||||||||||  ||||||| |||||||||||||| | || ||||||||||| |  |    
T  124744 aagattctttcacctaaactacttccaagatttcagaacgactgatcaaactcacaactcttaccctaactgaaagaaccctggagtcaaagtacctcga 124645  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| ||||   ||||||||||| | | |||| ||||| ||||||||||||| ||||||||||||||    
T  124644 tgaacgttcactgactaatcaaaatatttatcgactaaccaagcttacaactttcaccctaatgaca 124578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 322 - 462
Target Start/End: Complemental strand, 32059168 - 32059026
Alignment:
Q  322 caaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaac 419  Q
    |||||| |||| |||||||||||||||||||   ||||| ||||||||| ||||  ||| ||| |||||||||| ||||| |||| | |||||||||| |    
T  32059168 caaagacttcagaacgactgatcaaactcaaaattcttaccctaactgacagaactttggagtgaaagtacttggatgaacgttcaatgactaatcaacc 32059069  T
Q  420 tctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||| |||| ||||||||| ||||||||||||||||||||||||    
T  32059068 tctttatcgactaatcaaacttacaactctcaccctaatgaca 32059026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 421
Target Start/End: Complemental strand, 124560 - 124435
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| ||| || ||||||| ||| ||||||||||||| ||||||||||||||  ||||||| ||||||||||| ||||||| |||||||||||||| |    
T  124560 aagattattcaacctaaactacttccaagatttcaaaacaactgatcaaactcacaactcttaccctaactgaaataatcttggagtcaaagtacttgga 124461  T
Q  396 tgaatgttcgacgactaatcaaactc 421  Q
    |||| |||| | ||||||||||||||    
T  124460 tgaacgttcaatgactaatcaaactc 124435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 298 - 423
Target Start/End: Original strand, 23484109 - 23484236
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| || ||||  || || |||||||||||||||||||||||||  ||||||| | ||| ||||||||||||| |||||||||||||| |    
T  23484109 aagattcttcgacctatactacctccaaaatttcaaaacgactgatcaaactcacaactcttaccataattgaaagaatcttggagtcaaagtacttgga 23484208  T
Q  396 tgaatgttcgacgactaatcaaactctc 423  Q
    |||| |||| | ||||||||||||||||    
T  23484209 tgaacgttcaatgactaatcaaactctc 23484236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 422
Target Start/End: Original strand, 34907541 - 34907666
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||  || ||||||| ||| ||||||||||||||||| ||||||||  ||||||||| |||||||||||| |||||| |||||||||||||| |    
T  34907541 aagattctttaacctaaactacttccaagatttcaaaacgactaatcaaactcacaactcttaccctaactgaaag-atcttggagtcaaagtacttgga 34907639  T
Q  396 tgaatgttcgacgactaatcaaactct 422  Q
    |||| |||| | |||||||||||||||    
T  34907640 tgaacgttcaatgactaatcaaactct 34907666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 302 - 477
Target Start/End: Original strand, 23484857 - 23485034
Alignment:
Q  302 ttcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaa 399  Q
    ||||| ||| ||| ||| ||||||||||||||| ||||| ||||||||||  ||||||| ||| |||  |||||||||| |||||||||||||| |||||    
T  23484857 ttcttagacctaacctacttcaaagatttcaaagcgactcatcaaactcacaactcttaccctcactagaagaatcttggagtcaaagtacttggatgaa 23484956  T
Q  400 tgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
     |||| | || |||| ||||||| || | ||||||||||| |  |||||| ||||||| |||| || |||||||||||    
T  23484957 cgttcaatgaataatgaaactctttaacgactaatcaagcatgtaactctaaccctaacgacaatagtcttcgaccta 23485034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 457
Target Start/End: Complemental strand, 32059448 - 32059290
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||| ||| ||||||||||||||||| | | |||| || ||||||||||  ||||||| | ||||||||||||||||| ||||||| |||||  ||||    
T  32059448 attctttgacctaaactatttcaaagatgtaagaacgtcttatcaaactcacaactcttaccttaactgaaagaatcttggagtcaaaatacttagatga 32059349  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaa 457  Q
    | |||| | ||||||||||||| | |||| ||||||| | || |||||||| |||||||    
T  32059348 acgttcaatgactaatcaaactatttatcgactaatcgaactcacaactcttaccctaa 32059290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 422
Target Start/End: Original strand, 34907196 - 34907322
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| ||| ||||||||| | ||| ||||||||||||  ||||||| ||||||||||||||||||| ||||||||||| || |    
T  34907196 aagattctttgacctaaactacttctaagatttcacagcgattgatcaaactcacaactcttaacctaactgaaagaatcttggagtcaaagtacctgga 34907295  T
Q  396 tgaatgttcgacgactaatcaaactct 422  Q
    |||||||||   ||||||| |||||||    
T  34907296 tgaatgttcactgactaataaaactct 34907322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 462
Target Start/End: Complemental strand, 124926 - 124762
Alignment:
Q  302 ttcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaa 399  Q
    ||||| ||| ||||||| ||||||||| ||| ||| ||| ||||||||||  ||||||  |||||| |||||||||||| |||||| ||||||| |||||    
T  124926 ttcttagacctaaactaattcaaagatgtcataacaacttatcaaactcacaactcttgccctaacagaaagaatcttggagtcaatgtacttggatgaa 124827  T
Q  400 tgttcgacgactaatcaaactctc--tatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
     | ||   |||||||||||||||   |||| ||||||||||||||||||| |||||||| |||||    
T  124826 cgatcactgactaatcaaactcttgttatcgactaatcaagcttacaactatcaccctattgaca 124762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 477
Target Start/End: Original strand, 23480035 - 23480212
Alignment:
Q  302 ttcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaa 399  Q
    ||||| ||| ||| ||| ||||||||||||||| ||||| ||||||||||  ||| ||| ||| |||  |||||||||| |||||||||||||| |||||    
T  23480035 ttcttagacctaacctacttcaaagatttcaaagcgactcatcaaactcacaacttttacccttactagaagaatcttggagtcaaagtacttggatgaa 23480134  T
Q  400 tgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
     |||| | || |||| ||||||| || | ||||||||||| |  |||||| ||||||| |||| || |||||||||||    
T  23480135 cgttcaatgaataatgaaactctttaacgactaatcaagcatgtaactctaaccctaacgacaatagtcttcgaccta 23480212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 460
Target Start/End: Complemental strand, 16535120 - 16534956
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| || |||| ||| ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| ||  ||||||||||| |  |    
T  16535120 aagattcttcgacctagactacttctaagatttcaaaacgactaatcaaactcgcaactcttaccctaacttaaagaatattagagtcaaagtacgttca 16535021  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatga 460  Q
    |||| |  | |||||||||||||  || |||| | |||||| |||||||| | ||||||||||||    
T  16535020 tgaacggccaacgactaatcaaagactttatcgattaatcaggcttacaagtatcaccctaatga 16534956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 460
Target Start/End: Original strand, 23483926 - 23484089
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||||||| ||  |   ||||||||||  ||||||| ||| | | |||||||||||||||||||||||||| ||||    
T  23483926 attcttcgacctaaactacttccaagatttcagaaaaatccatcaaactcacaactcttacccttattaaaagaatcttgtagtcaaagtacttggatga 23484025  T
Q  399 atgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatga 460  Q
    | |||| | |||||||||||||||   |||| ||||| ||||||||||| ||| || |||||||    
T  23484026 acgttcaatgactaatcaaactcttgttatcgactaaccaagcttacaaatctaactctaatga 23484089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 16535632 - 16535467
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| |||||||| | ||| ||||| ||| ||| ||| |||||| |||  ||||||| | ||||||||||| |||||||| ||||||||||| |    
T  16535632 aagattcttcaacataaacaacttccaagatgtcataacaactaatcaaattcacaactcttaccataactgaaaga-tcttgtagacaaagtacttgga 16535534  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||| | ||||||||||| | |  | | |||||||||  | |||||||||| ||||||||||    
T  16535533 tgaatgttcaatgactaatcaaatttttcaccgactaatcaaattaacaactctcaacctaatgaca 16535467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 477
Target Start/End: Complemental strand, 32059591 - 32059436
Alignment:
Q  324 aagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactc 421  Q
    |||||| || ||||||| ||||||||||  | ||||| ||||||||||||||| ||| ||||||||||| |  ||||| |||  | |||||| | ||||     
T  32059591 aagattgcagaacgactcatcaaactcacaaatcttaccctaactgaaagaatattggagtcaaagtacctagatgaacgttaaatgactaacccaacta 32059492  T
Q  422 tctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | |||| | |||| |||||||||||||||||||||| || | ||||||| ||||||    
T  32059491 tttatcgattaattaagcttacaactctcaccctaacgataatattctttgaccta 32059436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 16534756 - 16534682
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtca 384  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||| |||||    
T  16534756 taaactaattcaaagatttcaaaacgactgatcaaactcacaactcttaccctaacttaaagaatattggagtca 16534682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 399
Target Start/End: Complemental strand, 125098 - 124995
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| || | |||| ||| |||||| |||||  |||||||||||| |||| ||| ||||||| ||||| ||||||||||    
T  125098 aagattcttcgacctaaactacttccaatacttcagaacaactgatgaaactaacaactcttatccaaacttaaataatcttggagtcagagtacttgaa 124999  T
Q  396 tgaa 399  Q
    ||||    
T  124998 tgaa 124995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 460
Target Start/End: Complemental strand, 32059304 - 32059194
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| |||||||||||||||| || ||| |||||||||  || || |||  | |||||||| | || | |||| |||||| ||||||||||||||    
T  32059304 caactcttaccctaactgaaagaatcctggagtgaaagtacttatataaacgtttaatgactaatccagctatttatcgactaattaagcttacaactct 32059205  T
Q  450 caccctaatga 460  Q
    |||| ||||||    
T  32059204 caccttaatga 32059194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 9873456 - 9873575
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| | ||| ||||||| |||||||| || |||||||| |||||||||| | ||||||||||| | |  ||| ||| |||||  | ||||||||    
T  9873456 caactcttaccataaatgaaaga-tcttgtagacacagtacttggatgaatgttcaatgactaatcaaatttttcatcgacttatcaaattaacaactct 9873554  T
Q  450 caccctaatgacagtattctt 470  Q
    || |||||||||| |||||||    
T  9873555 caacctaatgacattattctt 9873575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 351
Target Start/End: Original strand, 9874262 - 9874301
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca 351  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  9874262 taaactacttcaaagatttcaaaacgactgatcaaactca 9874301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 471
Target Start/End: Complemental strand, 16535685 - 16535623
Alignment:
Q  409 actaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    |||||||||||||| || | ||||||||||||||||||||||| |||||| |||  |||||||    
T  16535685 actaatcaaactctttaccgactaatcaagcttacaactctcaacctaataacaagattcttc 16535623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 16534936 - 16534883
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca 351  Q
    |||||||||  || ||||||| ||||||||||| ||||||||||||||||||||    
T  16534936 aagattctttcacctaaactacttcaaagatttaaaaacgactgatcaaactca 16534883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 16535959 - 16535854
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||| ||||||||||||||| | ||||| |||  || ||||  ||||||||||||||| ||| ||||||| ||| || ||||    
T  16535959 attcttccacctaaactacttcgaagatttcaaaacgaataatcaagctcaaaattcttgccctaactgaaagaatattggagtcaaactacctgcatga 16535860  T
Q  399 atgttc 404  Q
    | ||||    
T  16535859 acgttc 16535854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 475
Target Start/End: Complemental strand, 18454279 - 18454154
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||    
T  18454279 caactcttaccctaactgaaagaatcttggagtgaaagtacttggatgaatgttcaacgactaatcaaactctttatcaactaatcaagcttaaaacact 18454180  T
Q  450 caccctaatgacagtattcttcgacc 475  Q
     ||||||||| ||  |||||||||||    
T  18454179 aaccctaatggcaagattcttcgacc 18454154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 298 - 422
Target Start/End: Complemental strand, 15571707 - 15571581
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||  || ||||||| ||| ||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||| |||||||||||||| |    
T  15571707 aagattctttaacctaaactacttccaagatttcaaaacgactaatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttgga 15571608  T
Q  396 tgaatgttcgacgactaatcaaactct 422  Q
    |||| |||| | |||||||||||||||    
T  15571607 tgaacgttcaatgactaatcaaactct 15571581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 12522923 - 12522776
Alignment:
Q  313 aaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgac 410  Q
    |||||| ||||||||| |||||||||||||||||| |||  ||||||| ||||||||||||||| ||| ||| |||||||||  ||||| |||| |  ||    
T  12522923 aaactacttcaaagatgtcaaaacgactgatcaaattcacaactcttaccctaactgaaagaattttggagtgaaagtacttagatgaacgttcaattac 12522824  T
Q  411 taatcaaactctctatcaactaatcaagcttacaactctcaccctaat 458  Q
    ||||  |||| | |||| ||||||||||||||||||||||||||||||    
T  12522823 taattcaactatttatcgactaatcaagcttacaactctcaccctaat 12522776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 312 - 462
Target Start/End: Complemental strand, 18454505 - 18454351
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| ||| ||||| ||| ||||||| ||||||||||  ||||||| ||||||||||||||||||| |||||||||||||| ||||| |||| | ||    
T  18454505 taaactacttccaagatgtcataacgactcatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatga 18454406  T
Q  410 ctaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||||||||||||   |||| ||||||||||| |  |||||| ||||||||||||    
T  18454405 ctaatcaaactcttgttatcgactaatcaagcatgtaactctaaccctaatgaca 18454351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 301 - 471
Target Start/End: Complemental strand, 18453498 - 18453326
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaa--ctcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| || |||| ||| ||||| ||| ||||||| || | |||||   |||||| ||||||| |||||||||||  || |||||||||| ||||    
T  18453498 attcttcgacctagactacttccaagatgtcataacgactcattagactcacagctcttaccctaactcaaagaatcttgcggtgaaagtacttggatga 18453399  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    | |||| | ||||||||||||||  |||| ||||||||||||||||||||||||||||| ||||  |||||||    
T  18453398 acgttcaatgactaatcaaactccttatcgactaatcaagcttacaactctcaccctaacgacaagattcttc 18453326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 477
Target Start/End: Complemental strand, 18454167 - 18453986
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||||||  |||||| ||| ||||||||| |||||||  | |||||  ||||||||| || ||||||||||||  ||||||||||||||||| |    
T  18454167 aagattcttcgacccaaactacttccaagatttcagaacgactctttaaacttacaactcttacccaaactgaaagaataatgtagtcaaagtacttgga 18454068  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||  | |||||||| || | |  ||| ||||||||| |||| | || ||||||||| |||| ||||||||||||||    
T  18454067 tgaatgtttaatgactaatccaatttttaatcgactaatcaaccttaaatctatcaccctaacgacaatattcttcgaccta 18453986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 18454631 - 18454519
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| ||||||| ||||||| ||  ||| |||||||||| ||||| |||| | ||||| ||||||||| |||| |||||||||||||||||||||    
T  18454631 caactcttaccctaactcaaagaatgttacagtgaaagtacttggatgaacgttcaatgactagtcaaactctttatcgactaatcaagcttacaactct 18454532  T
Q  450 caccctaatgaca 462  Q
    |||||||| ||||    
T  18454531 caccctaacgaca 18454519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 477
Target Start/End: Complemental strand, 18453667 - 18453486
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| | ||||| ||| || || ||| || |||| ||||||||  ||||||||| || || ||||||||||||| ||||||| |||||  |    
T  18453667 aagattcttcgaccttaactacttccaaaatgtcagaatgactcatcaaacttacaactcttacccaaattgaaagaatcttgcagtcaaattactttga 18453568  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| ||||||| || || | |  ||| ||||||||| |||| |||||||| ||||| |||| ||||||||||||||    
T  18453567 tgaatgttcaacgactagtccaatttttaatcgactaatcaaccttaaaactctcatcctaacgacaatattcttcgaccta 18453486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 455
Target Start/End: Complemental strand, 18453335 - 18453176
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||| ||||| ||| ||||| | ||||||||||  ||||||| ||||| ||||| ||||||| |||||||||||||| |    
T  18453335 aagattcttcaacttaaactacttccaagatgtcataacgaatcatcaaactcacaactcttaccctaattgaaataatcttgcagtcaaagtacttgga 18453236  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccct 455  Q
    |||| |||| | || |||||||| | |  ||| ||||||||| | |||||||||||||||    
T  18453235 tgaacgttcaatgaataatcaaattgttcatctactaatcaaacctacaactctcaccct 18453176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 360 - 476
Target Start/End: Complemental strand, 18453769 - 18453653
Alignment:
Q  360 cctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatg 459  Q
    |||||| ||| |||||||| ||| |||||||||| ||||| |||| | ||||||||||||||| |||| |||| |||||||||||||||||||||  | |    
T  18453769 cctaaccgaatgaatcttgcagtgaaagtacttggatgaaagttcaatgactaatcaaactctttatcgactagtcaagcttacaactctcacccctacg 18453670  T
Q  460 acagtattcttcgacct 476  Q
    |||  ||||||||||||    
T  18453669 acaagattcttcgacct 18453653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 459
Target Start/End: Complemental strand, 14493269 - 14493111
Alignment:
Q  303 tcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaa--ctcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaat 400  Q
    |||| ||| ||||||| ||| ||||| |||| | ||||||||||||||||  |||||| ||||  ||||||||||||  ||| |||||||||| ||||      
T  14493269 tctttgacctaaactacttccaagatgtcaagatgactgatcaaactcaaaactcttaccctacgtgaaagaatcttagagtgaaagtacttggatgacc 14493170  T
Q  401 gttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatg 459  Q
     ||| | ||||||||||||||| ||   |||||| ||||||||||||||||||||||||    
T  14493169 attcaatgactaatcaaactctttactgactaattaagcttacaactctcaccctaatg 14493111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 6988716 - 6988644
Alignment:
Q  319 tttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagta 389  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||| ||||| ||||||||||||||||||    
T  6988716 tttcaaagatttcaaaacgactgatcaaactcacaactcttaccctaaatgaaataatcttgtagtcaaagta 6988644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 462
Target Start/End: Complemental strand, 15571821 - 15571725
Alignment:
Q  366 tgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||||||| |||||| ||||| | ||||| |||| | ||||||||||||| | |||| ||||| |||||||||| |||| ||||||||||||    
T  15571821 tgaaagaatcttggagtcaatgtactcggatgaacgttcaatgactaatcaaactatttatcgactaaccaagcttacatctctaaccctaatgaca 15571725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 14493354 - 14493259
Alignment:
Q  382 tcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||||||||  |||||||||| | |||||||| || | |  | | |||||||||||||||||||||||||||||||||| || |||| ||||||    
T  14493354 tcaaagtacttagatgaatgttcaatgactaatccaatttttcaccgactaatcaagcttacaactctcaccctaatgacaataatctttgaccta 14493259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 420
Target Start/End: Complemental strand, 12523060 - 12522960
Alignment:
Q  322 caaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaac 419  Q
    |||||| |||| |||||||||||||||||||   ||||| ||||||||| ||||  ||| ||| |||||||||| ||||| |||| | ||||||||||||    
T  12523060 caaagacttcagaacgactgatcaaactcaaaattcttaccctaactgacagaactttggagtgaaagtacttggatgaacgttcaatgactaatcaaac 12522961  T
Q  420 t 420  Q
    |    
T  12522960 t 12522960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 418
Target Start/End: Complemental strand, 14493436 - 14493350
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaa 418  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||| |  ||||||| |||| | |||||||||| |||||||||||||    
T  14493436 aacgactaatcaaactcacaactcttaccctaactaaaagaatccttgagtcaaaatactaggatgaatgttcaacgactaatcaaa 14493350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 462
Target Start/End: Complemental strand, 12522971 - 12522938
Alignment:
Q  429 actaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||| ||||||||||||||||||||||||    
T  12522971 actaatcaaacttacaactctcaccctaatgaca 12522938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 6e-35; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 11234843 - 11234665
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||||| | || || |  |||||||||  ||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  11234843 attcttcgacctaaactacttctaagattttagaatgattcttcaaactcacaactcttaccctaactgaaagaatcatgtagtcaaagtacttggatga 11234744  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| | ||| ||||||| ||| || | |||||||||||||| |||||| || ||||||||| ||||||||||||||    
T  11234743 atgttcaatgaccaatcaaattctttaccgactaatcaagcttaaaactctaactctaatgacaatattcttcgaccta 11234665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 312 - 477
Target Start/End: Complemental strand, 11235000 - 11234831
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| ||||||||||||||||| ||||||||||||||  ||||||  |||| |||||| ||||||| |||||||||| ||||||||| |||| | ||    
T  11235000 taaactaattcaaagatttcaaaactactgatcaaactcacaactctttccctagctgaaataatcttggagtcaaagtatttgaatgaacgttcaatga 11234901  T
Q  410 ctaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | |||||||||||   |||| | ||| ||||||||||| ||| |||||||||||| ||||||||||||||    
T  11234900 ccaatcaaactcttgttatcgaataaccaagcttacaaatctaaccctaatgacaatattcttcgaccta 11234831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 298 - 477
Target Start/End: Complemental strand, 11235348 - 11235167
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||  ||||||| ||  ||||| ||| |||||| |||||||||||  || |||| ||||||||||||||||||| |||||||||||||  |    
T  11235348 aagattcttcgatctaaactacttacaagatgtcagaacgaccgatcaaactcacaacgcttaccctaactgaaagaatcttggagtcaaagtactttga 11235249  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| | | ||| | | | | |  ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11235248 tgaatgttcaatggctagtaacaattttaatcgactaatcaatcttacaactctcaccctaatgacagtattcttcgaccta 11235167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 11234677 - 11234499
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||| | ||| | ||||||| |||||||  ||||| |||  ||||||| || ||||||||||||||| |||||||| |||||| ||||    
T  11234677 attcttcgacctaaaccacttccatgatttcagaacgactcttcaaagtcacaactcttaccccaactgaaagaatcttatagtcaaaatacttggatga 11234578  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| | ||||||||||| ||| |||| |||||||||||||| |||||| |||||||| |||  ||| |||||||||    
T  11234577 atgttcaatgactaatcaaattctttatcgactaatcaagcttaaaactctaaccctaataacaagattattcgaccta 11234499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 22256703 - 22256537
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| || |||| ||| ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| ||| ||||||||||| |  |    
T  22256703 aagattcttcgacctagactacttctaagatttcaaaacgacttatcaaactcgcaactcttaccctaacttaaagaatattggagtcaaagtacgttca 22256604  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |  | |||||||||||||  || |||| | |||||| |||||||| | ||||||||||||||    
T  22256603 tgaacggccaacgactaatcaaagactttatcgattaatcaggcttacaagtatcaccctaatgaca 22256537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 462
Target Start/End: Complemental strand, 11235179 - 11235014
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaactcttat--cctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| || |||| ||| ||||| ||| ||| ||  ||||||||||  ||| ||  ||||||||||||||||||| |||||||||||||  ||||    
T  11235179 attcttcgacctagactacttctaagatgtcagaaccacatatcaaactcacatctcattccctaactgaaagaatcttggagtcaaagtactttgatga 11235080  T
Q  399 atgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    | |||| | || ||||||||||||   |||| | ||| ||||||||||| ||| ||||||||||||    
T  11235079 acgttcaatgaataatcaaactcttgttatcgaataaccaagcttacaaatctaaccctaatgaca 11235014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 462
Target Start/End: Complemental strand, 22259686 - 22259521
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| |||||||| | ||| ||||| ||| ||| ||| |||||| |||  |||||||   ||||||||||| |||||||| ||||||||||| |    
T  22259686 aagattcttcaacataaacaacttccaagatgtcataacaactaatcaaattcacaactcttactataactgaaaga-tcttgtagacaaagtacttgga 22259588  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||| | ||||||||||| | |  | | |||||||||  | |||||||||| ||||||||||    
T  22259587 tgaatgttcaatgactaatcaaatttttcaccgactaatcaaattaacaactctcaacctaatgaca 22259521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 471
Target Start/End: Complemental strand, 22259740 - 22259677
Alignment:
Q  408 gactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    ||||||||||||||| || | ||||||||||||||||||||||| |||||| |||  |||||||    
T  22259740 gactaatcaaactctttaccgactaatcaagcttacaactctcaacctaataacaagattcttc 22259677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 417
Target Start/End: Complemental strand, 11234514 - 11234393
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| |||||| ||||||| ||| | || |||| ||||||| ||||||||  ||||||||| ||||| |||||||| ||| ||   |||||| || ||    
T  11234514 aagattattcgacctaaactacttccatgacttcagaacgacttatcaaactgacaactcttaccctaattgaaagaaacttatacggaaagtattttaa 11234415  T
Q  396 tgaatgttcgacgactaatcaa 417  Q
    ||||||||| | ||||||||||    
T  11234414 tgaatgttcaatgactaatcaa 11234393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 22256519 - 22256466
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca 351  Q
    |||||||||  || ||||||| |||||||| |||||||||||||||||||||||    
T  22256519 aagattctttcacctaaactacttcaaagacttcaaaacgactgatcaaactca 22256466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 22256339 - 22256301
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactc 350  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  22256339 taaactaattcaaagatttcaaaacgactgatcacactc 22256301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 22260013 - 22259908
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||| |||||||||||| || | |||||||||  || ||||  ||||||||||||||| ||| ||||||| ||| || ||||    
T  22260013 attcttccacctaaactacttcgaagatttcaaaatgaataatcaaactcaaaattcttgacctaactgaaagaatattggagtcaaactacctgcatga 22259914  T
Q  399 atgttc 404  Q
    | ||||    
T  22259913 acgttc 22259908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 301 - 471
Target Start/End: Original strand, 47325055 - 47325227
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||| ||| ||||||| |||| |||||  ||||||| ||||||| ||||||||||| ||| |||||||||  ||||    
T  47325055 attcttcgacctaaactacttccaagatgtcataacgactcatcagactcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttagatga 47325154  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    | |||| | ||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||  |||||||    
T  47325155 acgttcaatgactaatcaaactctttattgactaatcaagcttacaactctcaccctaacgacaagattcttc 47325227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 301 - 471
Target Start/End: Original strand, 47339851 - 47340023
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||| ||| ||||||| |||| |||||  ||||||| ||||||| ||||||||||| ||| |||||||||  ||||    
T  47339851 attcttcgacctaaactacttccaagatgtcataacgactcatcagactcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttagatga 47339950  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    | |||| | ||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||  |||||||    
T  47339951 acgttcaatgactaatcaaactctttattgactaatcaagcttacaactctcaccctaacgacaagattcttc 47340023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 43265686 - 43265867
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaa--ctcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||| ||||| ||||||| ||| ||||| ||| ||||||||||||||| ||   |||||| | |||||||||||||||||||||||||||||||| |    
T  43265686 aagattcatcgacttaaactacttccaagatgtcataacgactgatcaaacgcacagctcttaccataactgaaagaatcttgtagtcaaagtacttgga 43265785  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| | ||||||||||| | |  | | |||||||||  |||||||||||| ||||||||||  |||||| ||||||    
T  43265786 tgaatgttcaatgactaatcaaatttttcaccgactaatcaaatttacaactctcaacctaatgacaagattctttgaccta 43265867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 298 - 422
Target Start/End: Original strand, 13739940 - 13740066
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||  || ||||||| ||| ||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||| |||||||||||||| |    
T  13739940 aagattctttaacctaaactacttccaagatttcaaaacgactaatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttgga 13740039  T
Q  396 tgaatgttcgacgactaatcaaactct 422  Q
    |||| |||| | |||||||||||||||    
T  13740040 tgaacgttcaatgactaatcaaactct 13740066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 13743213 - 13743381
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||  || |||||||  || |||||||||||||||||||||||||||||   ||||  ||||||||||||||||||| |||||||||||||| |    
T  13743213 aagattctttaacctaaactacatccaagatttcaaaacgactgatcaaactcaaaattcttgccctaactgaaagaatcttggagtcaaagtacttgga 13743312  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| ||||   |||||||||||||||   |||| ||||| |||||||||| ||||||| |||||||||    
T  13743313 tgaacgttcactgactaatcaaactcttgttatcgactaaccaagcttacacctctcacactaatgaca 13743381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 298 - 476
Target Start/End: Original strand, 43265852 - 43266032
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| ||| ||||| ||| ||||||||||||||||||  || ||||  |||||||||||||| ||||| | |||||||||| |    
T  43265852 aagattctttgacctaaactacttccaagatgtcataacgactgatcaaactcacaacgcttactctaactgaaagaatattgtattgaaagtacttgga 43265951  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgacct 476  Q
    ||||||||| | ||||||||||| | |  | | ||||||||||| ||||||||||||||| |||||| || |||| |||||    
T  43265952 tgaatgttcaatgactaatcaaattgttcaccgactaatcaagcatacaactctcaccctgatgacaataatctttgacct 43266032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 350 - 475
Target Start/End: Original strand, 47324274 - 47324399
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| ||||||||||||||| ||| ||| |||||||||| |||||||||| ||||| ||||||||||| |||||||||||||| |||| ||| ||    
T  47324274 caactcttaccctaactgaaagaatattggagtgaaagtacttggatgaatgttcaacgaccaatcaaactctttatcaactaatcaaccttaaaacact 47324373  T
Q  450 caccctaatgacagtattcttcgacc 475  Q
     ||||||||| ||  |||||||||||    
T  47324374 aaccctaatggcaagattcttcgacc 47324399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 350 - 475
Target Start/End: Original strand, 47339070 - 47339195
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| ||||||||||||||| ||| ||| |||||||||| |||||||||| ||||| ||||||||||| |||||||||||||| |||| ||| ||    
T  47339070 caactcttaccctaactgaaagaatattggagtgaaagtacttggatgaatgttcaacgaccaatcaaactctttatcaactaatcaaccttaaaacact 47339169  T
Q  450 caccctaatgacagtattcttcgacc 475  Q
     ||||||||| ||  |||||||||||    
T  47339170 aaccctaatggcaagattcttcgacc 47339195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 422
Target Start/End: Original strand, 13742850 - 13742976
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| ||| ||||||||||| ||||||||||||||||  ||||||| ||||||| |||||| |||| ||||||||||| || |    
T  13742850 aagattctttgacctaaactacttctaagatttcaaagcgactgatcaaactcacaactcttaacctaactaaaagaaccttggagtcaaagtacctgga 13742949  T
Q  396 tgaatgttcgacgactaatcaaactct 422  Q
    |||||||||   |||||||||||||||    
T  13742950 tgaatgttcactgactaatcaaactct 13742976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 477
Target Start/End: Original strand, 15781294 - 15781471
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||| ||||| ||||||| ||| ||||| ||| |||||||||| |||||||  ||||||| | ||||||||||| ||||||||||||||||| || ||||    
T  15781294 attcatcgacttaaactacttccaagatgtcataacgactgattaaactcacaactcttaccataactgaaaga-tcttgtagtcaaagtacctggatga 15781392  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||| | ||||||||||| | |  | | |||||||||  | |||||||||| ||||||||||  |||||| ||||||    
T  15781393 atgttcaatgactaatcaaatttttcaccgactaatcaaattaacaactctcaacctaatgacatgattctttgaccta 15781471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 462
Target Start/End: Original strand, 47324555 - 47324720
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||| | | ||||||| ||||||||||  ||| ||| | ||||| ||||||||||| ||| |||||||||| ||||    
T  47324555 attcttcgacctaaactacttccaagatgttataacgactcatcaaactcataacttttaccttaactcaaagaatcttgcagtgaaagtacttggatga 47324654  T
Q  399 atgttcgacgactaatcaaa--ctctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    | |||  | |||||| ||||  |||| |||  ||||||||||||||||||||||||||||||||||    
T  47324655 acgttgaatgactaaacaaaaactctttatagactaatcaagcttacaactctcaccctaatgaca 47324720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 462
Target Start/End: Original strand, 47339351 - 47339516
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||||||| ||||||| ||| ||||| | | ||||||| ||||||||||  ||| ||| | ||||| ||||||||||| ||| |||||||||| ||||    
T  47339351 attcttcgacctaaactacttccaagatgttataacgactcatcaaactcataacttttaccttaactcaaagaatcttgcagtgaaagtacttggatga 47339450  T
Q  399 atgttcgacgactaatcaaa--ctctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    | |||  | |||||| ||||  |||| |||  ||||||||||||||||||||||||||||||||||    
T  47339451 acgttgaatgactaaacaaaaactctttatagactaatcaagcttacaactctcaccctaatgaca 47339516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 476
Target Start/End: Original strand, 47324108 - 47324234
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| ||||||| ||||||||||| ||| |||||||||| ||||| |||| | ||||||||||||||| |||| ||||||||||| |   |||||    
T  47324108 caactcttaccctaactcaaagaatcttgcagtgaaagtacttggatgaacgttcaatgactaatcaaactctttatcgactaatcaagcatgtgactct 47324207  T
Q  450 caccctaatgacagtattcttcgacct 476  Q
     ||||||||||||  |||||| |||||    
T  47324208 aaccctaatgacacgattctttgacct 47324234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 47324386 - 47324567
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||||||  |||||| ||| ||||||||| || ||||  |||||||||  ||||||| ||  ||| |||||||| ||||||||||||||||| |    
T  47324386 aagattcttcgacccaaactacttccaagatttcagaatgactcttcaaactcacaactcttacccagactaaaagaatcatgtagtcaaagtacttgga 47324485  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | ||||||  | |||||||| || | |  ||| ||||||||| |||| | |||||||||||| |||| ||||||||||||||    
T  47324486 taaatgtttaatgactaatccaatttttaatcgactaatcaaccttaaatctctcaccctaacgacaatattcttcgaccta 47324567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 476
Target Start/End: Original strand, 47338904 - 47339030
Alignment:
Q  350 caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactct 449  Q
    ||||||||| ||||||| ||||||||||| ||| |||||||||| ||||| |||| | ||||||||||||||| |||| ||||||||||| |   |||||    
T  47338904 caactcttaccctaactcaaagaatcttgcagtgaaagtacttggatgaacgttcaatgactaatcaaactctttatcgactaatcaagcatgtgactct 47339003  T
Q  450 caccctaatgacagtattcttcgacct 476  Q
     ||||||||||||  |||||| |||||    
T  47339004 aaccctaatgacacgattctttgacct 47339030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 47339182 - 47339363
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||||||  |||||| ||| ||||||||| || ||||  |||||||||  ||||||| ||  ||| |||||||| ||||||||||||||||| |    
T  47339182 aagattcttcgacccaaactacttccaagatttcagaatgactcttcaaactcacaactcttacccagactaaaagaatcatgtagtcaaagtacttgga 47339281  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    | ||||||  | |||||||| || | |  ||| ||||||||| |||| | |||||||||||| |||| ||||||||||||||    
T  47339282 taaatgtttaatgactaatccaatttttaatcgactaatcaaccttaaatctctcaccctaacgacaatattcttcgaccta 47339363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 447
Target Start/End: Original strand, 43264720 - 43264871
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| |||||| ||||||  ||| ||||||  |||||||||||||| ||||  |||| ||| ||||||| |||||||| || | |||||||||||| |    
T  43264720 aagattattcgacctaaactgcttccaagattataaaacgactgatcagactccaaacttttaccctaactaaaagaatcatggattcaaagtacttgga 43264819  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaact 447  Q
    |||| |||| | ||||||||||||| | |||||||||| |||||| ||||||    
T  43264820 tgaacgttcaatgactaatcaaactatttatcaactaaccaagctcacaact 43264871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 418
Target Start/End: Original strand, 43265174 - 43265293
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||| ||||||||||||||||| |||||||||||   ||||  ||||||||||||||||||| ||||||||||| || ||||    
T  43265174 attcttccacctaaactacttccaagatttcaaaacgactaatcaaactcaaaattcttgccctaactgaaagaatcttggagtcaaagtacctggatga 43265273  T
Q  399 atgttcgacgactaatcaaa 418  Q
    | |||| | |||||||||||    
T  43265274 acgttcaatgactaatcaaa 43265293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 437
Target Start/End: Original strand, 43265337 - 43265475
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||  ||||||| ||||||||| ||| ||||||||||||||||  ||||| |||  |||||||||||||||||| ||| ||||||||||      
T  43265337 aagattctttgatctaaactacttcaaagatgtcagaacgactgatcaaactcacaacttttacgctaactgaaagaatcttgcagtgaaagtacttg-- 43265434  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaa 437  Q
     ||| |||| | ||||||||||||||| |||| |||||||||    
T  43265435 -gaacgttcaatgactaatcaaactctttatcgactaatcaa 43265475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 13743029 - 13743195
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||  ||||||||||||||| |||| ||||||  || ||||  |||| || ||||||||||| |||||||||||| | |    
T  13743029 aagattcttccacctaaactacttacaagatttcaaaacgattgattaaactctaaattcttgccctagctaaaagaatcttggagtcaaagtactcgga 13743128  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |||| | ||||||| ||||| | |||  ||||| ||||||||||||||| ||||||| ||||    
T  13743129 tgaacgttcaatgactaatgaaactatttattgactaaccaagcttacaactctaaccctaaggaca 13743195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 47324886 - 47325067
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaa--ctcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| | ||||| ||| || || ||| || |||| ||||||||||   |||||| | ||||||||||||||||| ||||||| | |||| |    
T  47324886 aagattcttcgaccttaactacttccaaaatgtcagaaagactcatcaaactcacagctcttaccataactgaaagaatcttgcagtcaaattgcttgga 47324985  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| ||||||| || || | |  ||| ||||||||| |||| | ||||||  |||| |||||||||||||||||||    
T  47324986 tgaatgttcaacgactagtccaatttttaatcgactaatcaaccttaaagctctcattctaacgacagtattcttcgaccta 47325067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 47339682 - 47339863
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaa--ctcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| | ||||| ||| || || ||| || |||| ||||||||||   |||||| | ||||||||||||||||| ||||||| | |||| |    
T  47339682 aagattcttcgaccttaactacttccaaaatgtcagaaagactcatcaaactcacagctcttaccataactgaaagaatcttgcagtcaaattgcttgga 47339781  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| ||||||| || || | |  ||| ||||||||| |||| | ||||||  |||| |||||||||||||||||||    
T  47339782 tgaatgttcaacgactagtccaatttttaatcgactaatcaaccttaaagctctcattctaacgacagtattcttcgaccta 47339863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 334 - 476
Target Start/End: Original strand, 47324756 - 47324900
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    ||||||||||||| ||||  | | ||| |||||| ||| |||||||| ||| |||||||||| ||||| |||| | ||||||||||||||| |||| |||    
T  47324756 aacgactgatcaagctcacaaattttaccctaaccgaatgaatcttggagtgaaagtacttggatgaacgttcaatgactaatcaaactctttatcgact 47324855  T
Q  432 aatcaagcttacaactctcaccctaatgacagtattcttcgacct 476  Q
    | |||||||||||| ||||||||  | ||||  ||||||||||||    
T  47324856 agtcaagcttacaagtctcacccctacgacaagattcttcgacct 47324900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 334 - 476
Target Start/End: Original strand, 47339552 - 47339696
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    ||||||||||||| ||||  | | ||| |||||| ||| |||||||| ||| |||||||||| ||||| |||| | ||||||||||||||| |||| |||    
T  47339552 aacgactgatcaagctcacaaattttaccctaaccgaatgaatcttggagtgaaagtacttggatgaacgttcaatgactaatcaaactctttatcgact 47339651  T
Q  432 aatcaagcttacaactctcaccctaatgacagtattcttcgacct 476  Q
    | |||||||||||| ||||||||  | ||||  ||||||||||||    
T  47339652 agtcaagcttacaagtctcacccctacgacaagattcttcgacct 47339696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 301 - 426
Target Start/End: Original strand, 15780759 - 15780886
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    ||||||| || ||||||| ||| ||||||||||||||||| |||||||||  || ||||  ||||||||||||||| ||| ||||||| ||| || ||||    
T  15780759 attcttccacctaaactacttccaagatttcaaaacgactaatcaaactcaaaattcttgccctaactgaaagaatattggagtcaaactacctgcatga 15780858  T
Q  399 atgttcgacgactaatcaaactctctat 426  Q
    | |||| | ||||||||||||| |||||    
T  15780859 acgttcaatgactaatcaaactatctat 15780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 437
Target Start/End: Original strand, 15780922 - 15781060
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||  ||||||| ||||||||| ||| ||  ||| |||||||||  |||| ||| ||||||||||||||||||| ||| ||||||||||      
T  15780922 aagattctttgatctaaactacttcaaagatgtcagaataactaatcaaactcgcaacttttaccctaactgaaagaatcttgcagtgaaagtacttg-- 15781019  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaa 437  Q
     |||||||| | ||||||||||||||| |||| |||||||||    
T  15781020 -gaatgttcaatgactaatcaaactctttatcgactaatcaa 15781060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 422
Target Start/End: Original strand, 13743399 - 13743525
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| ||  |||||| || ||||||||||||||||||  ||||||| ||||||||||||||||||  | ||||||||| || |    
T  13743399 aagattctttgacctaaactacttataagattccacaacgactgatcaaactcacaactcttaacctaactgaaagaatctttgaatcaaagtacctgga 13743498  T
Q  396 tgaatgttcgacgactaatcaaactct 422  Q
    |||| |||| |  ||||||||||||||    
T  13743499 tgaacgttcaataactaatcaaactct 13743525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 404
Target Start/End: Original strand, 43265017 - 43265125
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| ||| ||||| ||| ||||||||||||||||  ||||||||| ||||||||||||||||||  ||||||| ||| || |    
T  43265017 aagattctttgacttaaactacttccaagatatcagaacgactgatcaaactcacaactcttaccctaactgaaagaatcttagagtcaaattacctgga 43265116  T
Q  396 tgaatgttc 404  Q
    |||| ||||    
T  43265117 tgaacgttc 43265125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 462
Target Start/End: Original strand, 13739826 - 13739922
Alignment:
Q  366 tgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||||||| |||||| ||||| | ||||| |||| | ||||||||||||| | |||| ||||| |||||||||| |||| ||||||||||||    
T  13739826 tgaaagaatcttggagtcaatgtactcggatgaacgttcaatgactaatcaaactatttatcgactaaccaagcttacatctctaaccctaatgaca 13739922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 399
Target Start/End: Original strand, 15780561 - 15780650
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaa 399  Q
    ||||||| | |||||||||||||||||||  |||||| ||  ||||||| ||||||||||||||| ||| |||||||||||||| |||||    
T  15780561 taaactaatccaaagatttcaaaacgacttttcaaacgcacaactcttaccctaactgaaagaattttggagtcaaagtacttggatgaa 15780650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 455
Target Start/End: Original strand, 47325283 - 47325373
Alignment:
Q  365 ctgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccct 455  Q
    |||||||||||||| |||||||||||||| ||||| |||| | || |||||||| | |  ||| ||||||||||| |||||||||||||||    
T  47325283 ctgaaagaatcttgcagtcaaagtacttggatgaacgttcaatgaataatcaaattgttcatcgactaatcaagcctacaactctcaccct 47325373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 455
Target Start/End: Original strand, 47340079 - 47340169
Alignment:
Q  365 ctgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccct 455  Q
    |||||||||||||| |||||||||||||| ||||| |||| | || |||||||| | |  ||| ||||||||||| |||||||||||||||    
T  47340079 ctgaaagaatcttgcagtcaaagtacttggatgaacgttcaatgaataatcaaattgttcatcgactaatcaagcctacaactctcaccct 47340169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 15781071 - 15781140
Alignment:
Q  408 gactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  15781071 gactaatcaaactctttaccgactaatcaagcttacaactctcaacctaatgacaagattcttcaaccta 15781140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 36392991 - 36393035
Alignment:
Q  108 gcgttgataatttttgggaagagggaaacgaaaatgtgaaaatta 152  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  36392991 gcgttgataatttttgggaagagggaaacaaaaatgtgaaaatta 36393035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 474
Target Start/End: Original strand, 15781125 - 15781303
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||| ||||  ||| ||| | | ||||||||||  ||||||| | |||| |||||||||||| |||||||||||||       
T  15781125 aagattcttcaacctaaactacttccaagaagtcataacaaattatcaaactcacaactcttaccttaaccgaaagaatcttggagtcaaagtacttagg 15781224  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgac 474  Q
    ||||||||| | ||||||||||| | |  |   |||||| ||||||||||||| |  |||||||||| ||||| |||||    
T  15781225 tgaatgttcaatgactaatcaaatttttcacagactaataaagcttacaactcccgacctaatgacaatattcatcgac 15781303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 418
Target Start/End: Original strand, 43265520 - 43265642
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||| ||||  ||| ||| | | ||||||||||  ||||||| | |||| ||||||||||||||||||||||||||       
T  43265520 aagattcttcaacctaaactacttccaagacgtcataacaatttatcaaactcacaactcttaccttaaccgaaagaatcttgtagtcaaagtacttagg 43265619  T
Q  396 tgaatgttcgacgactaatcaaa 418  Q
    ||||||||| | |||||||||||    
T  43265620 tgaatgttcaatgactaatcaaa 43265642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 462
Target Start/End: Original strand, 43264538 - 43264702
Alignment:
Q  302 ttcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaa 399  Q
    ||||| ||| ||||||| ||| ||||| ||| ||||||| ||||||||||  | | ||| |||||| |||||| ||||| | | |||||||||| |||||    
T  43264538 ttctttgacctaaactacttcgaagatgtcacaacgactaatcaaactcacaaattttaccctaaccgaaagagtcttgcattgaaagtacttggatgaa 43264637  T
Q  400 tgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
     |||| | ||||||||||| | |   |||| ||||| ||||||||||||| || |||||||||||    
T  43264638 cgttcaatgactaatcaaatttttgttatctactaaccaagcttacaactatcgccctaatgaca 43264702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 36227557 - 36227496
Alignment:
Q  104 gagcgcgttgataatttttgggaagagggaaacg-aaaatgtgaaaattatagggggaaaat 164  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||  |||||| ||||    
T  36227557 gagcgccttgataatttttgggaagagggaaacgaaaaatgtgaaaattggaggggggaaat 36227496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 43263809 - 43263860
Alignment:
Q  111 ttgataatttttgggaagagggaaacgaaaatgtgaaaattatagggggaaa 162  Q
    ||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  43263809 ttgataaattttcggaagagggaaacgaaaacgtgaaaattatggggggaaa 43263860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 43265465 - 43265535
Alignment:
Q  407 cgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||||||||||  | | ||||||||| || |||||||||| ||||||||||  ||||||| |||||    
T  43265465 cgactaatcaaactcttcaccgactaatcaaactcacaactctcaacctaatgacaagattcttcaaccta 43265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 301 - 462
Target Start/End: Original strand, 11762942 - 11763105
Alignment:
Q  301 attcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaatga 398  Q
    |||||| ||| ||||||| | ||||||  ||||||||| || | ||||||||   |||||  |||||||||||||||||| |||||||||| ||| ||||    
T  11762942 attctttgacctaaactactacaaagacctcaaaacgagtggtgaaactcaaaattcttactctaactgaaagaatcttggagtcaaagtagttggatga 11763041  T
Q  399 atgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    | |||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  11763042 acgttcaaggactaatcaaactttttatcaactaatcaagcttacaactctcaccctaatgaca 11763105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 51858080 - 51858209
Alignment:
Q  335 acgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaacta 432  Q
    |||||||||||||||||  ||||||| |||| ||||| |||||||| ||| |||||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  51858080 acgactgatcaaactcacaactcttaccctagctgaacgaatcttggagtgaaagtacttggatgaacgttcaacgactaatcaaactctttatcaacta 51858179  T
Q  433 atcaagcttacaactctcaccctaatgaca 462  Q
    |||  ||||| |||||||||| ||||||||    
T  51858180 atcctgcttaaaactctcaccttaatgaca 51858209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 312 - 477
Target Start/End: Original strand, 49791182 - 49791349
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| ||| ||||| ||| ||||||||||||||||||  |||||||   |||||||||||||||||||||||||||||||| |||||| ||| | ||    
T  49791182 taaactacttccaagatgtcataacgactgatcaaactcacaactcttactataactgaaagaatcttgtagtcaaagtacttggatgaatattcaatga 49791281  T
Q  410 ctaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| | |  |   |||||||||  |||||||||||| ||||||||||  |||||| ||||||    
T  49791282 ctaatcaaatttttcacagactaatcaaatttacaactctcaacctaatgacaagattctttgaccta 49791349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 49791818 - 49791976
Alignment:
Q  303 tcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaa--ctcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaat 400  Q
    |||| ||| ||||||| ||||||||| |||| ||||||||||||||||||  |||||| ||||  ||||||||||||  ||| |||||||||| ||||      
T  49791818 tctttgacctaaactacttcaaagatgtcaagacgactgatcaaactcaaaactcttaccctacgtgaaagaatcttagagtgaaagtacttggatgacc 49791917  T
Q  401 gttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatg 459  Q
     ||| | ||||||||||||||| ||   |||||| ||||||||||||||||||||||||    
T  49791918 attcaatgactaatcaaactctttactgactaattaagcttacaactctcaccctaatg 49791976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 11763457 - 11763638
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| |||||   | ||||||  ||||||||||  ||||||| ||||| ||||||||||||| |||||||||||||| |    
T  11763457 aagattcttcgacctaaactacttccaagatagaataacgaccaatcaaactcacaactcttaccctaagtgaaagaatcttgcagtcaaagtacttgga 11763556  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||| || |||||||||| | |  | ||| |||||||||||| |||  ||||| || |||||  |||||||||||||    
T  11763557 tgaatgttcaacaactaatcaaatttttcaccaaataatcaagcttataacaatcaccttagtgacaagattcttcgaccta 11763638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 394
Target Start/End: Original strand, 51858227 - 51858324
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttga 394  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||| ||| |||||||||||    
T  51858227 aagattctttgacctaaactatttccaagatttcaaaacgactgatcaaactcacaactcttatcctaact-aaaaaatcttgaagtgaaagtacttga 51858324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 437
Target Start/End: Original strand, 11763141 - 11763246
Alignment:
Q  334 aacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    |||||||||||||||| ||   ||||| ||||||||||||||||||| ||| |||||||||| ||||| |||| ||||||||||||||||| |||| |||    
T  11763141 aacgactgatcaaactaaaaattcttaccctaactgaaagaatcttgcagtgaaagtacttggatgaacgttcaacgactaatcaaactctttatcgact 11763240  T
Q  432 aatcaa 437  Q
    ||||||    
T  11763241 aatcaa 11763246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 477
Target Start/End: Original strand, 11763825 - 11763970
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    ||||||||||||||||||  ||||||| ||||||| ||||||||||| |||||| ||||| | |||||||||| | ||| ||| ||| | |  ||  |||    
T  11763825 aacgactgatcaaactcacaactcttaccctaactcaaagaatcttgcagtcaatgtactaggatgaatgttcaatgaccaataaaaattttaattgact 11763924  T
Q  432 aatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||||||| |||||||||||||| |||| || |||||||||||    
T  11763925 aatcaagcttaaaactctcaccctaacgacaatactcttcgaccta 11763970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 51857856 - 51858024
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| || |||| ||| || |||||| |||||||  |||||||||  ||||||| ||||||||||| ||||||| |||||||||||||| |    
T  51857856 aagattcttcgacctacactacttccaaaatttcagaacgactcttcaaactcacgactcttaccctaactgaaataatcttggagtcaaagtacttgga 51857955  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |||  | || ||||||||||||   |||||||||||||| | |  |||||| ||||||||||||    
T  51857956 tgaacgttgaatgattaatcaaactcttgttatcaactaatcaaacctgtaactctaaccctaatgaca 51858024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 472
Target Start/End: Original strand, 11763623 - 11763799
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| ||||||| ||| |||||   | ||||||||||||||||  ||||||||| | |||||||||||||| || ||| | |||||||| |    
T  11763623 aagattcttcgacctaaactacttccaagatagaataacgactgatcaaactcacaactcttaccttaactgaaagaatcatgcagtaagagtacttgga 11763722  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcg 472  Q
    ||||||||  | ||||||| |||   |  ||  ||||||||| |||||||||||||||||||||||| || ||||||    
T  11763723 tgaatgttaaatgactaataaaaaatttaattcactaatcaatcttacaactctcaccctaatgacaatactcttcg 11763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 418
Target Start/End: Original strand, 49791002 - 49791124
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||| ||| ||||| ||| ||| ||||||||||||||  ||||||| | |||| |||||||||||| |||||||||||||  |    
T  49791002 aagattcttcaacctaaactacttccaagatgtcataacaactgatcaaactcacaactcttaccttaaccgaaagaatcttgcagtcaaagtacttaga 49791101  T
Q  396 tgaatgttcgacgactaatcaaa 418  Q
    ||||||||| | |||||||||||    
T  49791102 tgaatgttcaatgactaatcaaa 49791124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 477
Target Start/End: Original strand, 11762773 - 11762954
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| || ||| ||||||||| ||||||  ||| ||||||| || ||||||||   ||||| |||||||||||||||  || |||||||||||||| |    
T  11762773 aagattatttgacctaaactattacaaagacctcataacgactaatgaaactcaaaattcttaccctaactgaaagaatactggagtcaaagtacttgga 11762872  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||| ||||   |||||||| || | |  ||||||||||||| ||||||||| |||||||||| |||  |||||| ||||||    
T  11762873 tgaacgttcattgactaatccaaatgttaatcaactaatcaatcttacaactatcaccctaatcacaacattctttgaccta 11762954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 437
Target Start/End: Original strand, 49790819 - 49790957
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||  ||||||| ||||||||| ||  ||||||| ||||||||||  ||| ||| ||||||||||||||| ||||||| ||||||||||      
T  49790819 aagattctttgatctaaactacttcaaagatgtctgaacgactaatcaaactcacaacttttaccctaactgaaagaatattgtagtaaaagtacttg-- 49790916  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaa 437  Q
     ||| |||| | ||||||||||||||| |||| |||||||||    
T  49790917 -gaacgttcaatgactaatcaaactctttatcgactaatcaa 49790957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 477
Target Start/End: Original strand, 11763327 - 11763472
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaact 431  Q
    ||||||||||||||||||  ||||||| |||||||||||||| |||| ||||||||| |||| || ||||||  | ||||||||||| | |  | | |||    
T  11763327 aacgactgatcaaactcacaactcttaccctaactgaaagaaacttgcagtcaaagttcttggattaatgttttaagactaatcaaatttttcaccgact 11763426  T
Q  432 aatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||| |||  ||||||| | ||||||||  |||||||||||||    
T  11763427 aatcaagattaacactctcaacttaatgacaagattcttcgaccta 11763472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 475
Target Start/End: Original strand, 11762651 - 11762764
Alignment:
Q  362 taactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgac 461  Q
    ||||||||||||||||  |||||||||| ||||||||| |||| | ||||||||||||  | |||| ||||| ||| ||||||||||  |||||||||||    
T  11762651 taactgaaagaatctttgagtcaaagtagttgaatgaacgttcaaggactaatcaaacattttatcgactaaccaatcttacaactccaaccctaatgac 11762750  T
Q  462 agtattcttcgacc 475  Q
    |  |||||| ||||    
T  11762751 aacattctttgacc 11762764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 407 - 484
Target Start/End: Original strand, 11763236 - 11763313
Alignment:
Q  407 cgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgacctatgctact 484  Q
    |||||||||||||||| ||   |||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||    
T  11763236 cgactaatcaaactctttactgactaatcaagcttacaacactcatcctaatgacaatatttttcgacctatgctact 11763313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 334 - 418
Target Start/End: Original strand, 49791651 - 49791737
Alignment:
Q  334 aacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaa 418  Q
    ||||||||||||||||||  ||||||| ||||||| |||||||| |  |||||||||||| | |||||||||| |||||||||||||    
T  49791651 aacgactgatcaaactcacaactcttaccctaactaaaagaatcctcgagtcaaagtactaggatgaatgttcaacgactaatcaaa 49791737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 49791733 - 49791828
Alignment:
Q  382 tcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||||||||  |||||||||||| |||||||| || | |  |   |||||||||||||||||||||||||||||||||| || |||| ||||||    
T  49791733 tcaaagtacttagatgaatgttcgatgactaatccaatttttcacagactaatcaagcttacaactctcaccctaatgacaataatctttgaccta 49791828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 49790947 - 49791017
Alignment:
Q  407 cgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  49790947 cgactaatcaaactctttactgactaatcaagcttacaactctcaacctaatgacaagattcttcaaccta 49791017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 51857242 - 51857295
Alignment:
Q  114 ataatttttgggaagagggaaacgaaaatgtgaaaattata-gggggaaaatgt 166  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  51857242 ataatttttgggaggagggaaaccaaaatgtgaaaattatatgggggaaaatgt 51857295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 51857823 - 51857871
Alignment:
Q  429 actaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    |||||||||||||| |||||| || |||||||||  |||||||||||||    
T  51857823 actaatcaagcttaaaactctaactctaatgacaagattcttcgaccta 51857871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 72; Significance: 2e-32; HSPs: 9)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 5034 - 5200
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| |||||||   |||||| |||  || |||||||||||||||  ||||||| ||||||||||||||||||| ||||| |||||||| |    
T  5034 aagattctttgacctaaactaccacaaagacttcttaatgactgatcaaactcacaactcttaccctaactgaaagaatcttggagtcagagtacttgga 5133  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |||| | ||||||||||||| | |||| ||||| ||||||||||||||| ||||||||||||    
T  5134 tgaacgttcaatgactaatcaaactatttatcgactaaccaagcttacaactctaaccctaatgaca 5200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 4848 - 5016
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| |||||| ||||||  ||| ||||||||||||||||||| |||||||  |||| ||| |||||| ||||||||| || |||||||||||||| |    
T  4848 aagattattcgacctaaactgcttccaagatttcaaaacgactgaacaaactccaaacttttaccctaaccgaaagaatcatggagtcaaagtacttgga 4947  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    ||||||||| | ||||||||||||| |   |||| ||||| ||||||||||||| | ||||||||||||    
T  4948 tgaatgttcaatgactaatcaaacttttgttatccactaaccaagcttacaactatgaccctaatgaca 5016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 5218 - 5386
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||| ||| ||||||| | |||||| |||  ||||| ||||||||||||  ||||||| ||||| ||||||||||||| ||||| |||| ||| |    
T  5218 aagattctttgacctaaactactacaaagacttcttaacgattgatcaaactcacaactcttaccctaattgaaagaatcttggagtcagagtatttgga 5317  T
Q  396 tgaatgttcgacgactaatcaaactct--ctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |||| | ||||||||||| | |    ||| ||||| ||||||||||||| ||||||||||||||    
T  5318 tgaacgttcaatgactaatcaaatttttgtcatctactaaccaagcttacaactatcaccctaatgaca 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 422
Target Start/End: Original strand, 5742 - 5867
Alignment:
Q  299 agattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactc--aactcttatcctaactgaaagaatcttgtagtcaaagtacttgaat 396  Q
    |||||||| ||| ||| ||| |||||||||||||||| |||| ||||||| |  |||||||| ||||||||||||||||||  |||||||||| ||| ||    
T  5742 agattcttagacctaacctaattcaaagatttcaaaatgactaatcaaacacgcaactcttaccctaactgaaagaatcttagagtcaaagtatttggat 5841  T
Q  397 gaatgttcgacgactaatcaaactct 422  Q
     ||||| | | |||||||||||||||    
T  5842 taatgtgcaatgactaatcaaactct 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 5404 - 5507
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||| |||||| |||| |  ||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| || || |||||||| |    
T  5404 aagattattcgacctaaatttcttccaagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagacagagtacttgga 5503  T
Q  396 tgaa 399  Q
    ||||    
T  5504 tgaa 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 312 - 417
Target Start/End: Original strand, 5604 - 5711
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacga 409  Q
    ||||||| ||||||||| ||| ||| ||| ||||||||||  ||||| | |||||||||||||||| || |||||||||| ||| || |||| |||| ||    
T  5604 taaactaattcaaagatgtcataacaacttatcaaactcacaactctcaccctaactgaaagaatcctggagtcaaagtagttggatcaatgatcgatga 5703  T
Q  410 ctaatcaa 417  Q
    ||||||||    
T  5704 ctaatcaa 5711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 5939 - 6030
Alignment:
Q  329 ttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaa 418  Q
    |||| ||||||||||||||||  ||||||||| ||||||| ||||| ||||| ||| |||||||||| || || |||||| |||||| ||||    
T  5939 ttcacaacgactgatcaaactcacaactcttaccctaactcaaagattcttgcagtgaaagtacttggataaacgttcgatgactaaacaaa 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 462
Target Start/End: Original strand, 29091 - 29256
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| || ||||||  | |||||| |||  |||||| |||||||||||  ||||||| |||||||  |||||||| | ||||| |||| ||| |    
T  29091 aagattcttcaacctaaactgctacaaagacttcttaacgaccgatcaaactcacaactcttaccctaacttgaagaatctaggagtcagagtatttgga 29190  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgaca 462  Q
    |||| |||| | ||||||||||| |  | ||| ||||| ||| ||||||| | ||||||||||||||    
T  29191 tgaacgttcaatgactaatcaaattggc-atctactaaccaaccttacaattatcaccctaatgaca 29256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 477
Target Start/End: Original strand, 4696 - 4863
Alignment:
Q  314 aactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgact 411  Q
    ||||| ||| ||||| ||| ||||||| ||||||||||  | | ||| |||||| |||| | ||||| | | |||||||||| | ||| |||| | ||||    
T  4696 aactacttcgaagatgtcacaacgactaatcaaactcacaaattttaccctaaccgaaaaagtcttgcattgaaagtacttggaagaacgttcaatgact 4795  T
Q  412 aatcaaactctc--tatcaactaatcaagcttacaactctcaccctaatgacagtattcttcgaccta 477  Q
    ||||||| | |   |||| ||||| ||||||||||||| ||||||||||||||  ||| |||||||||    
T  4796 aatcaaatttttgttatctactaaccaagcttacaactatcaccctaatgacaagattattcgaccta 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 8e-22; HSPs: 6)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 460
Target Start/End: Complemental strand, 82333 - 82169
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    ||||||||||||| || |||| ||| ||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||| ||||| ||||| |  |    
T  82333 aagattcttcgacctagactacttctaagatttcaaaacgactgatcaaactcgcaactcttaccctaacttaaagaatattggagtcacagtacgttca 82234  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatga 460  Q
    |||| |  | |||||||||||||  || |||| | |||||| |||||||| | | ||||||||||    
T  82233 tgaacggccaacgactaatcaaagactttatcgattaatcaggcttacaagtataaccctaatga 82169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 426
Target Start/End: Original strand, 83987 - 84091
Alignment:
Q  324 aagatttcaaaacgactgatcaaactcaac--tcttatcctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactc 421  Q
    ||||||||||||||| | |||||||||||   ||||  ||||||||||||||| ||| ||||||| ||| || ||||| |||| | |||||||||||||     
T  83987 aagatttcaaaacgaataatcaaactcaaaattcttgacctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatgactaatcaaacta 84086  T
Q  422 tctat 426  Q
    |||||    
T  84087 tctat 84091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 462
Target Start/End: Original strand, 84377 - 84476
Alignment:
Q  362 taactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgac 461  Q
    ||||||||||| |||||||| ||||||||||| |||||||||| | ||||||||||| | |  | | |||||||||  | |||||||||| |||||||||    
T  84377 taactgaaaga-tcttgtagacaaagtacttggatgaatgttcaatgactaatcaaatttttcaccgactaatcaaattaacaactctcaacctaatgac 84475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 471
Target Start/End: Original strand, 84257 - 84320
Alignment:
Q  408 gactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattcttc 471  Q
    ||||||||||||||| || | ||||||||||||||||||||||| |||||| |||  |||||||    
T  84257 gactaatcaaactctttaccgactaatcaagcttacaactctcaacctaataacaagattcttc 84320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 82149 - 82096
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca 351  Q
    |||||||||  || ||||||| |||||||| |||||||||||||||||||||||    
T  82149 aagattctttcacgtaaactacttcaaagacttcaaaacgactgatcaaactca 82096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 81969 - 81931
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaactc 350  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  81969 taaactaattcaaagatttcaaaacgactgatcacactc 81931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 459
Target Start/End: Complemental strand, 5416 - 5253
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||||||||| |||| ||| ||||||||||||| ||||||||||||  ||||| ||| ||| ||| ||||||| ||| ||||||||||| |  |    
T  5416 aagattcttcgacatagactacttctaagatttcaaaacaactgatcaaactcgcaacttttaccctgacttaaagaatattggagtcaaagtacgttca 5317  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatg 459  Q
    |||| |  | |||||||||||||| || |||| | |||||| |||||||| | ||||| |||||    
T  5316 tgaacggccaacgactaatcaaacactttatcgattaatcaggcttacaagtatcaccataatg 5253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 470
Target Start/End: Complemental strand, 6110 - 5937
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca--actcttatcctaactgaaagaatcttgtagtcaaagtacttgaa 395  Q
    |||||||||| |||||||| | ||| ||||| ||| ||| |||||||||| |||  ||||||| | ||||||||||| |||||||| || |||||||| |    
T  6110 aagattcttcaacataaacaacttccaagatgtcataacaactgatcaaattcacaactcttaccataactgaaaga-tcttgtagacagagtacttgga 6012  T
Q  396 tgaatgttcgacgactaatcaaactctctatcaactaatcaagcttacaactctcaccctaatgacagtattctt 470  Q
    ||||||||| | ||||||||||| | |  ||| | |||||||  | |||||||||| |||||||||| |||||||    
T  6011 tgaatgttcaatgactaatcaaatttttcatcgaataatcaaattaacaactctcaacctaatgacattattctt 5937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 5232 - 5179
Alignment:
Q  298 aagattcttcgacataaactatttcaaagatttcaaaacgactgatcaaactca 351  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  5232 aagattctttgacctaaactacttcaaagatttcaaaacgactgatcaaactca 5179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 5052 - 4978
Alignment:
Q  312 taaactatttcaaagatttcaaaacgactgatcaaact--caactcttatcctaactgaaagaatcttgtagtca 384  Q
    ||||||| |||||| |||||||||||||||||||||||  ||||||||| || |||| ||||||| ||| |||||    
T  5052 taaactaattcaaatatttcaaaacgactgatcaaactcacaactcttacccgaacttaaagaatattggagtca 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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