View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17187_low_9 (Length: 312)
Name: NF17187_low_9
Description: NF17187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17187_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 104 - 298
Target Start/End: Complemental strand, 51541516 - 51541322
Alignment:
| Q |
104 |
caaaacatcatctctcatcttcgagacatctttttccttccctttcttgtcatattatttatttcactttcatcttcccttgtttgagagagcagtgcat |
203 |
Q |
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| T |
51541516 |
caaaacatcatctctcatcttcgagacatctttttccttccctttcttgtcatattctttatttcactttcatcttcccttgtttgagagagtagtgcat |
51541417 |
T |
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| Q |
204 |
gtctttcacattatgaagacaccaatgacgttaaaaactcacggatgtcttcacattacaagtaccgctgaaatcttttcttcaattttttgcat |
298 |
Q |
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| T |
51541416 |
gtctttcacattatgaagacaccaatgacgttaaaaactcacggatgtcttcacattacaagtaccgctgaaatcttttcttcaattttttgcat |
51541322 |
T |
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