View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17188_high_38 (Length: 252)

Name: NF17188_high_38
Description: NF17188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17188_high_38
NF17188_high_38
[»] chr6 (31 HSPs)
chr6 (92-234)||(31416902-31417044)
chr6 (1-64)||(31416825-31416888)
chr6 (200-233)||(978161-978194)
chr6 (193-233)||(6210057-6210097)
chr6 (193-233)||(9704420-9704460)
chr6 (194-233)||(28148760-28148799)
chr6 (200-233)||(607197-607230)
chr6 (200-233)||(3294774-3294807)
chr6 (200-233)||(3794200-3794233)
chr6 (200-233)||(3795801-3795834)
chr6 (200-233)||(4408368-4408401)
chr6 (200-233)||(7207854-7207887)
chr6 (200-233)||(7545339-7545372)
chr6 (200-233)||(7865382-7865415)
chr6 (200-233)||(8439685-8439718)
chr6 (200-233)||(9246409-9246442)
chr6 (200-233)||(9372228-9372261)
chr6 (200-233)||(9435636-9435669)
chr6 (200-233)||(10501166-10501199)
chr6 (200-233)||(10934609-10934642)
chr6 (200-233)||(15091458-15091491)
chr6 (200-233)||(16966421-16966454)
chr6 (200-233)||(17441866-17441899)
chr6 (200-233)||(19374867-19374900)
chr6 (200-233)||(19953855-19953888)
chr6 (200-233)||(28030874-28030907)
chr6 (200-233)||(29284276-29284309)
chr6 (200-233)||(32611581-32611614)
chr6 (200-233)||(33573827-33573860)
chr6 (193-233)||(28222866-28222906)
chr6 (200-232)||(30885598-30885630)
[»] chr8 (47 HSPs)
chr8 (192-234)||(13773418-13773460)
chr8 (200-233)||(24296895-24296928)
chr8 (200-233)||(40362058-40362091)
chr8 (193-233)||(11483123-11483163)
chr8 (193-233)||(16432155-16432195)
chr8 (200-234)||(2590159-2590193)
chr8 (200-234)||(8698606-8698640)
chr8 (200-234)||(43656046-43656080)
chr8 (200-233)||(12252-12285)
chr8 (200-233)||(94538-94571)
chr8 (200-233)||(1937320-1937353)
chr8 (200-233)||(2787108-2787141)
chr8 (200-233)||(3189976-3190009)
chr8 (200-233)||(5328594-5328627)
chr8 (200-233)||(6659299-6659332)
chr8 (200-233)||(6739701-6739734)
chr8 (200-233)||(8265278-8265311)
chr8 (200-233)||(10573111-10573144)
chr8 (200-233)||(10587304-10587337)
chr8 (200-233)||(10736901-10736934)
chr8 (200-233)||(11875896-11875929)
chr8 (200-233)||(11890903-11890936)
chr8 (200-233)||(16449135-16449168)
chr8 (200-233)||(17027907-17027940)
chr8 (200-233)||(17558343-17558376)
chr8 (200-233)||(17698532-17698565)
chr8 (200-233)||(22274638-22274671)
chr8 (200-233)||(23178918-23178951)
chr8 (200-233)||(23858207-23858240)
chr8 (200-233)||(26022257-26022290)
chr8 (200-233)||(27077124-27077157)
chr8 (200-233)||(29716870-29716903)
chr8 (200-233)||(30972844-30972877)
chr8 (200-233)||(32719634-32719667)
chr8 (200-233)||(34158684-34158717)
chr8 (200-233)||(34266022-34266055)
chr8 (200-233)||(34413072-34413105)
chr8 (200-233)||(34894379-34894412)
chr8 (200-233)||(35939497-35939530)
chr8 (200-233)||(38219595-38219628)
chr8 (200-233)||(39362275-39362308)
chr8 (200-233)||(41689892-41689925)
chr8 (200-233)||(42006788-42006821)
chr8 (200-233)||(43186863-43186896)
chr8 (200-233)||(43283993-43284026)
chr8 (193-233)||(7388458-7388498)
chr8 (200-232)||(12273705-12273737)
[»] chr7 (39 HSPs)
chr7 (200-234)||(24062037-24062071)
chr7 (200-233)||(4960794-4960827)
chr7 (193-233)||(31026222-31026262)
chr7 (198-233)||(21388531-21388566)
chr7 (200-234)||(10244915-10244949)
chr7 (200-234)||(21066896-21066930)
chr7 (200-234)||(37300125-37300159)
chr7 (200-234)||(41699649-41699683)
chr7 (200-234)||(47641055-47641089)
chr7 (200-234)||(47999790-47999824)
chr7 (200-233)||(2228985-2229018)
chr7 (200-233)||(2681106-2681139)
chr7 (200-233)||(9877294-9877327)
chr7 (200-233)||(12640616-12640649)
chr7 (200-233)||(12772125-12772158)
chr7 (200-233)||(15238899-15238932)
chr7 (200-233)||(19752995-19753028)
chr7 (200-233)||(23102585-23102618)
chr7 (192-233)||(24508828-24508869)
chr7 (200-233)||(24781040-24781073)
chr7 (200-233)||(25833565-25833598)
chr7 (200-233)||(27510284-27510317)
chr7 (200-233)||(29617415-29617448)
chr7 (200-233)||(30388534-30388567)
chr7 (200-233)||(30806125-30806158)
chr7 (200-233)||(32676969-32677002)
chr7 (200-233)||(33996908-33996941)
chr7 (200-233)||(35950138-35950171)
chr7 (200-233)||(36174400-36174433)
chr7 (200-233)||(36391931-36391964)
chr7 (200-233)||(41084049-41084082)
chr7 (200-233)||(41465844-41465877)
chr7 (200-233)||(42443699-42443732)
chr7 (200-233)||(44616612-44616645)
chr7 (200-233)||(46534775-46534808)
chr7 (193-233)||(12264057-12264097)
chr7 (200-232)||(32984245-32984277)
chr7 (193-233)||(36622177-36622217)
chr7 (200-232)||(36720117-36720149)
[»] scaffold0001 (1 HSPs)
scaffold0001 (200-233)||(510966-510999)
[»] scaffold1185 (1 HSPs)
scaffold1185 (193-233)||(2400-2440)
[»] scaffold0460 (2 HSPs)
scaffold0460 (193-233)||(12462-12502)
scaffold0460 (200-233)||(13230-13263)
[»] scaffold0121 (2 HSPs)
scaffold0121 (193-233)||(11997-12037)
scaffold0121 (200-233)||(46536-46569)
[»] chr5 (31 HSPs)
chr5 (193-233)||(5966832-5966872)
chr5 (193-233)||(43580881-43580921)
chr5 (193-232)||(42158885-42158924)
chr5 (200-234)||(12891567-12891601)
chr5 (200-234)||(39886238-39886272)
chr5 (200-233)||(1743137-1743170)
chr5 (200-233)||(4417712-4417745)
chr5 (200-233)||(4745903-4745936)
chr5 (200-233)||(6518803-6518836)
chr5 (200-233)||(8241060-8241093)
chr5 (200-233)||(8968759-8968792)
chr5 (200-233)||(9835043-9835076)
chr5 (200-233)||(11774486-11774519)
chr5 (200-233)||(11897258-11897291)
chr5 (200-233)||(12463766-12463799)
chr5 (200-233)||(16386768-16386801)
chr5 (200-233)||(16603408-16603441)
chr5 (200-233)||(17545199-17545232)
chr5 (200-233)||(21918062-21918095)
chr5 (200-233)||(25400394-25400427)
chr5 (200-233)||(25472610-25472643)
chr5 (200-233)||(27765267-27765300)
chr5 (200-233)||(27798631-27798664)
chr5 (200-233)||(28308244-28308277)
chr5 (200-233)||(30571164-30571197)
chr5 (200-233)||(32505698-32505731)
chr5 (200-233)||(35515522-35515555)
chr5 (200-233)||(40361606-40361639)
chr5 (200-233)||(41179830-41179863)
chr5 (200-233)||(42320327-42320360)
chr5 (200-233)||(42525410-42525443)
[»] chr4 (43 HSPs)
chr4 (193-233)||(27743735-27743775)
chr4 (200-234)||(8144617-8144651)
chr4 (200-234)||(39696363-39696397)
chr4 (200-234)||(40051632-40051666)
chr4 (200-234)||(40994129-40994163)
chr4 (203-233)||(42134484-42134514)
chr4 (193-231)||(42218753-42218791)
chr4 (180-234)||(42381139-42381193)
chr4 (200-233)||(627009-627042)
chr4 (200-233)||(3847691-3847724)
chr4 (200-233)||(6371124-6371157)
chr4 (200-233)||(8965104-8965137)
chr4 (193-234)||(18424923-18424964)
chr4 (200-233)||(21935487-21935520)
chr4 (200-233)||(22230461-22230494)
chr4 (200-233)||(22788701-22788734)
chr4 (200-233)||(24680113-24680146)
chr4 (200-233)||(26868359-26868392)
chr4 (200-233)||(26919495-26919528)
chr4 (200-233)||(30057232-30057265)
chr4 (200-233)||(30217609-30217642)
chr4 (200-233)||(34353789-34353822)
chr4 (200-233)||(37935871-37935904)
chr4 (200-233)||(39023185-39023218)
chr4 (200-233)||(43147411-43147444)
chr4 (200-233)||(43207679-43207712)
chr4 (200-233)||(43596905-43596938)
chr4 (200-233)||(43978018-43978051)
chr4 (200-233)||(46105545-46105578)
chr4 (200-233)||(46582644-46582677)
chr4 (200-233)||(46775057-46775090)
chr4 (200-233)||(48569203-48569236)
chr4 (200-233)||(49901492-49901525)
chr4 (200-233)||(54534836-54534869)
chr4 (200-233)||(55251378-55251411)
chr4 (193-233)||(3157244-3157284)
chr4 (200-232)||(4590256-4590288)
chr4 (200-232)||(8433651-8433683)
chr4 (193-233)||(12167643-12167683)
chr4 (200-232)||(25726337-25726369)
chr4 (202-234)||(31016348-31016380)
chr4 (201-233)||(51512036-51512068)
chr4 (193-233)||(56479253-56479293)
[»] chr3 (50 HSPs)
chr3 (193-233)||(10482880-10482920)
chr3 (193-233)||(11250618-11250658)
chr3 (193-233)||(19996479-19996519)
chr3 (193-233)||(28689699-28689739)
chr3 (200-234)||(17602702-17602736)
chr3 (200-234)||(53163604-53163638)
chr3 (200-233)||(882399-882432)
chr3 (200-233)||(2522936-2522969)
chr3 (200-233)||(4139010-4139043)
chr3 (200-233)||(4640507-4640540)
chr3 (200-233)||(5636826-5636859)
chr3 (200-233)||(6919990-6920023)
chr3 (200-233)||(7269965-7269998)
chr3 (200-233)||(7920330-7920363)
chr3 (200-233)||(8125649-8125682)
chr3 (200-233)||(9176613-9176646)
chr3 (200-233)||(10176930-10176963)
chr3 (200-233)||(15975162-15975195)
chr3 (200-233)||(17218498-17218531)
chr3 (200-233)||(18194348-18194381)
chr3 (200-233)||(19550516-19550549)
chr3 (200-233)||(19999877-19999910)
chr3 (200-233)||(22501958-22501991)
chr3 (200-233)||(25938957-25938990)
chr3 (200-233)||(26942763-26942796)
chr3 (200-233)||(28550346-28550379)
chr3 (200-233)||(30779594-30779627)
chr3 (200-233)||(31327528-31327561)
chr3 (200-233)||(31327745-31327778)
chr3 (200-233)||(31586957-31586990)
chr3 (200-233)||(36625198-36625231)
chr3 (200-233)||(37800638-37800671)
chr3 (200-233)||(39719945-39719978)
chr3 (200-233)||(39966101-39966134)
chr3 (200-233)||(40192166-40192199)
chr3 (200-233)||(40548313-40548346)
chr3 (200-233)||(40933858-40933891)
chr3 (200-233)||(41936434-41936467)
chr3 (200-233)||(42108209-42108242)
chr3 (200-233)||(44652009-44652042)
chr3 (200-233)||(45701354-45701387)
chr3 (200-233)||(47098742-47098775)
chr3 (200-233)||(49447148-49447181)
chr3 (200-233)||(50496841-50496874)
chr3 (200-233)||(52410268-52410301)
chr3 (200-233)||(52945905-52945938)
chr3 (200-233)||(53347317-53347350)
chr3 (193-233)||(4200612-4200652)
chr3 (193-233)||(11436507-11436547)
chr3 (200-232)||(45513023-45513055)
[»] chr2 (33 HSPs)
chr2 (193-233)||(3438951-3438991)
chr2 (193-233)||(17487707-17487747)
chr2 (203-234)||(33669749-33669780)
chr2 (203-233)||(29942153-29942183)
chr2 (200-234)||(30392858-30392892)
chr2 (200-233)||(1500971-1501004)
chr2 (200-233)||(1844827-1844860)
chr2 (200-233)||(2643707-2643740)
chr2 (200-233)||(3446740-3446773)
chr2 (200-233)||(4183186-4183219)
chr2 (200-233)||(4562779-4562812)
chr2 (200-233)||(6331572-6331605)
chr2 (200-233)||(6635994-6636027)
chr2 (200-233)||(8250328-8250361)
chr2 (200-233)||(15764940-15764973)
chr2 (200-233)||(18278444-18278477)
chr2 (200-233)||(18694795-18694828)
chr2 (200-233)||(19281618-19281651)
chr2 (200-233)||(19684083-19684116)
chr2 (200-233)||(22653671-22653704)
chr2 (200-233)||(25857322-25857355)
chr2 (200-233)||(28195161-28195194)
chr2 (200-233)||(30390396-30390429)
chr2 (193-234)||(33222180-33222221)
chr2 (200-233)||(33228960-33228993)
chr2 (200-233)||(34613989-34614022)
chr2 (200-233)||(36182652-36182685)
chr2 (200-233)||(38400320-38400353)
chr2 (200-233)||(41509526-41509559)
chr2 (200-233)||(44658340-44658373)
chr2 (200-233)||(44857261-44857294)
chr2 (200-233)||(44948606-44948639)
chr2 (201-233)||(7281715-7281747)
[»] chr1 (49 HSPs)
chr1 (193-233)||(6130060-6130100)
chr1 (193-233)||(46021906-46021946)
chr1 (200-234)||(42054343-42054377)
chr1 (200-233)||(1570219-1570252)
chr1 (200-233)||(2277764-2277797)
chr1 (200-233)||(2556566-2556599)
chr1 (200-233)||(3269629-3269662)
chr1 (200-233)||(4482625-4482658)
chr1 (200-233)||(6438091-6438124)
chr1 (200-233)||(6702586-6702619)
chr1 (200-233)||(7166254-7166287)
chr1 (200-233)||(8415739-8415772)
chr1 (200-233)||(8865864-8865897)
chr1 (200-233)||(9866211-9866244)
chr1 (200-233)||(10664821-10664854)
chr1 (200-233)||(11215011-11215044)
chr1 (200-233)||(12502281-12502314)
chr1 (192-233)||(13538473-13538514)
chr1 (200-233)||(13773178-13773211)
chr1 (193-234)||(14349647-14349688)
chr1 (200-233)||(15819628-15819661)
chr1 (200-233)||(16343038-16343071)
chr1 (200-233)||(18467225-18467258)
chr1 (200-233)||(19063360-19063393)
chr1 (200-233)||(21265666-21265699)
chr1 (200-233)||(22563396-22563429)
chr1 (200-233)||(25999860-25999893)
chr1 (200-233)||(26584773-26584806)
chr1 (200-233)||(29188646-29188679)
chr1 (200-233)||(32594261-32594294)
chr1 (200-233)||(33207215-33207248)
chr1 (200-233)||(33254738-33254771)
chr1 (200-233)||(33274910-33274943)
chr1 (200-233)||(34058224-34058257)
chr1 (200-233)||(35605650-35605683)
chr1 (200-233)||(37662584-37662617)
chr1 (200-233)||(40375342-40375375)
chr1 (200-233)||(40519571-40519604)
chr1 (200-233)||(40520840-40520873)
chr1 (200-233)||(42490437-42490470)
chr1 (200-233)||(43884804-43884837)
chr1 (200-233)||(46965750-46965783)
chr1 (200-233)||(47930698-47930731)
chr1 (200-233)||(50899537-50899570)
chr1 (200-233)||(52369607-52369640)
chr1 (200-232)||(1151769-1151801)
chr1 (193-233)||(17580320-17580360)
chr1 (200-232)||(27818579-27818611)
chr1 (193-233)||(28867482-28867522)
[»] scaffold0025 (1 HSPs)
scaffold0025 (200-234)||(65813-65847)
[»] scaffold1372 (1 HSPs)
scaffold1372 (200-233)||(1874-1907)
[»] scaffold0707 (1 HSPs)
scaffold0707 (200-233)||(47-80)
[»] scaffold0608 (1 HSPs)
scaffold0608 (200-233)||(8976-9009)
[»] scaffold0445 (1 HSPs)
scaffold0445 (200-233)||(4041-4074)
[»] scaffold0366 (1 HSPs)
scaffold0366 (200-233)||(887-920)
[»] scaffold0330 (1 HSPs)
scaffold0330 (193-234)||(6771-6812)
[»] scaffold0187 (2 HSPs)
scaffold0187 (200-233)||(11147-11180)
scaffold0187 (200-233)||(21475-21508)
[»] scaffold0128 (1 HSPs)
scaffold0128 (200-233)||(17630-17663)
[»] scaffold0088 (1 HSPs)
scaffold0088 (200-233)||(10853-10886)
[»] scaffold0024 (1 HSPs)
scaffold0024 (200-233)||(59793-59826)
[»] scaffold0014 (1 HSPs)
scaffold0014 (200-233)||(12288-12321)
[»] scaffold0009 (1 HSPs)
scaffold0009 (200-233)||(266724-266757)
[»] scaffold0038 (1 HSPs)
scaffold0038 (193-233)||(23364-23404)


Alignment Details
Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 31416902 - 31417044
Alignment:
Q  92 caacttcctcactaagaaaactatatttaatttcatctttttcccttatacacgctcatgttgaatagattgttcatttaagtatacatttgatctgtct 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  31416902 caacttcctcactaagaaaactatatttaatttcatctttttcccttatacacgctcatgttgaatagattgttcacttaagcatacatttggtctgtct 31417001  T
Q  192 agtgaacgtagctcagttagtagggatattgcatattatatgt 234  Q
    ||||| |||| ||||||||  ||||||||||||||||||||||    
T  31417002 agtgagcgtaactcagttaacagggatattgcatattatatgt 31417044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31416825 - 31416888
Alignment:
Q  1 gagcaaacaaaggatagtgaactatgtggcaaagcagtgatagtaattgaaaggttgatcaact 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31416825 gagcaaacaaaggatagtgaactatgtggcaaagcagtgatagtaattgaaaggctgatcaact 31416888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 978194 - 978161
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  978194 tagctcagttagtagggatattgcatattatatg 978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 6210057 - 6210097
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  6210057 gtgaacttagctcagttggtagggatattgcatattatatg 6210097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 9704420 - 9704460
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  9704420 gtgaacttagctcagttggtagggatattgcatattatatg 9704460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 28148799 - 28148760
Alignment:
Q  194 tgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  28148799 tgaacttagctcagttggtagggatattgcatattatatg 28148760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 607197 - 607230
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  607197 tagctcagttggtagggatattgcatattatatg 607230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 3294774 - 3294807
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  3294774 tagctcagttggtagggatattgcatattatatg 3294807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 3794233 - 3794200
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  3794233 tagctcagttggtagggatattgcatattatatg 3794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 3795834 - 3795801
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  3795834 tagctcagttggtagggatattgcatattatatg 3795801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 4408368 - 4408401
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4408368 tagctcagttggtagggatattgcatattatatg 4408401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 7207854 - 7207887
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  7207854 tagctcagttggtagggatattgcatattatatg 7207887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 7545339 - 7545372
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  7545339 tagctcagttggtagggatattgcatattatatg 7545372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 7865415 - 7865382
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  7865415 tagctcagttggtagggatattgcatattatatg 7865382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8439685 - 8439718
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8439685 tagctcagttggtagggatattgcatattatatg 8439718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 9246442 - 9246409
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  9246442 tagctcagttggtagggatattgcatattatatg 9246409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 9372261 - 9372228
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  9372261 tagctcagttggtagggatattgcatattatatg 9372228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 9435636 - 9435669
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  9435636 tagctcagttggtagggatattgcatattatatg 9435669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 10501199 - 10501166
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10501199 tagctcagttggtagggatattgcatattatatg 10501166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 10934609 - 10934642
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10934609 tagctcagttggtagggatattgcatattatatg 10934642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 15091458 - 15091491
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  15091458 tagctcagttggtagggatattgcatattatatg 15091491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 16966454 - 16966421
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  16966454 tagctcagttggtagggatattgcatattatatg 16966421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17441899 - 17441866
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  17441899 tagctcagttggtagggatattgcatattatatg 17441866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 19374900 - 19374867
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||||||||| |||||||||||||||||    
T  19374900 tagctcagttagtaggaatattgcatattatatg 19374867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 19953888 - 19953855
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  19953888 tagctcagttggtagggatattgcatattatatg 19953855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 28030874 - 28030907
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  28030874 tagctcagttggtagggatattgcatattatatg 28030907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 29284276 - 29284309
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  29284276 tagctcagttggtagggatattgcatattatatg 29284309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 32611614 - 32611581
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  32611614 tagctcagttggtagggatattgcatattatatg 32611581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 33573827 - 33573860
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  33573827 tagctcagttggtagggatattgcatattatatg 33573860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 28222866 - 28222906
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  28222866 gtgaacttaactcagttggtagggatattgcatattatatg 28222906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 30885630 - 30885598
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  30885630 tagctcagttggtagggatattgcatattatat 30885598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 13773460 - 13773418
Alignment:
Q  192 agtgaacgtagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  13773460 agtgaacgtagctcagttggtagagatattgcatattatatgt 13773418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 24296928 - 24296895
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  24296928 tagctcagttagtagggatattgcatattatatg 24296895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 40362058 - 40362091
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  40362058 tagctcagttagtagggatattgcatattatatg 40362091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 11483123 - 11483163
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  11483123 gtgagcgtagctcagttagtaggaatattgcatattatatg 11483163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 16432195 - 16432155
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  16432195 gtgaacttagctcagttggtagggatattgcatattatatg 16432155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 2590159 - 2590193
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    ||||||| |||||||||||||||||||||||||||    
T  2590159 tagctcaattagtagggatattgcatattatatgt 2590193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 8698640 - 8698606
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  8698640 tagctcagttggtagggatattgcatattatatgt 8698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 43656046 - 43656080
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  43656046 tagctcagttggtagggatattgcatattatatgt 43656080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 12285 - 12252
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  12285 tagctcagttggtagggatattgcatattatatg 12252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 94571 - 94538
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  94571 tagctcagttggtagggatattgcatattatatg 94538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 1937320 - 1937353
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  1937320 tagctcagttggtagggatattgcatattatatg 1937353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 2787141 - 2787108
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  2787141 tagctcagttggtagggatattgcatattatatg 2787108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 3190009 - 3189976
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  3190009 tagctcagttggtagggatattgcatattatatg 3189976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 5328627 - 5328594
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  5328627 tagctcagttggtagggatattgcatattatatg 5328594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 6659299 - 6659332
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6659299 tagctcagttggtagggatattgcatattatatg 6659332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 6739701 - 6739734
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6739701 tagctcagttggtagggatattgcatattatatg 6739734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8265278 - 8265311
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8265278 tagctcagttggtagggatattgcatattatatg 8265311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 10573111 - 10573144
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10573111 tagctcagttggtagggatattgcatattatatg 10573144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 10587337 - 10587304
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10587337 tagctcagttggtagggatattgcatattatatg 10587304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 10736934 - 10736901
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10736934 tagctcagttggtagggatattgcatattatatg 10736901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 11875896 - 11875929
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  11875896 tagctcagttggtagggatattgcatattatatg 11875929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 11890903 - 11890936
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  11890903 tagctcagttggtagggatattgcatattatatg 11890936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 16449135 - 16449168
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  16449135 tagctcagttggtagggatattgcatattatatg 16449168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17027940 - 17027907
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  17027940 tagctcagttggtagggatattgcatattatatg 17027907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17558376 - 17558343
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  17558376 tagctcagttggtagggatattgcatattatatg 17558343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 17698532 - 17698565
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  17698532 tagctcagttggtagggatattgcatattatatg 17698565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 22274671 - 22274638
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  22274671 tagctcagttggtagggatattgcatattatatg 22274638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 23178951 - 23178918
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  23178951 tagctcagttggtagggatattgcatattatatg 23178918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 23858207 - 23858240
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  23858207 tagctcagttggtagggatattgcatattatatg 23858240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 26022257 - 26022290
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  26022257 tagctcagttggtagggatattgcatattatatg 26022290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 27077157 - 27077124
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  27077157 tagctcagttggtagggatattgcatattatatg 27077124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 29716870 - 29716903
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  29716870 tagctcagttggtagggatattgcatattatatg 29716903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 30972877 - 30972844
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30972877 tagctcagttggtagggatattgcatattatatg 30972844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 32719667 - 32719634
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  32719667 tagctcagttggtagggatattgcatattatatg 32719634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 34158717 - 34158684
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  34158717 tagctcagttggtagggatattgcatattatatg 34158684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 34266022 - 34266055
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  34266022 tagctcagttggtagggatattgcatattatatg 34266055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 34413072 - 34413105
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  34413072 tagctcagttggtagggatattgcatattatatg 34413105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 34894379 - 34894412
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  34894379 tagctcagttggtagggatattgcatattatatg 34894412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 35939497 - 35939530
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  35939497 tagctcagttggtagggatattgcatattatatg 35939530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 38219628 - 38219595
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  38219628 tagctcagttggtagggatattgcatattatatg 38219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 39362275 - 39362308
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  39362275 tagctcagttggtagggatattgcatattatatg 39362308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 41689892 - 41689925
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  41689892 tagctcagttggtagggatattgcatattatatg 41689925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 42006788 - 42006821
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  42006788 tagctcagttggtagggatattgcatattatatg 42006821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 43186863 - 43186896
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  43186863 tagctcagttggtagggatattgcatattatatg 43186896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 43284026 - 43283993
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  43284026 tagctcagttggtagggatattgcatattatatg 43283993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 7388458 - 7388498
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  7388458 gtgaacttaactcagttggtagggatattgcatattatatg 7388498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 12273737 - 12273705
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||||||||| ||||||||||||||||    
T  12273737 tagctcagttagtaggaatattgcatattatat 12273705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 24062071 - 24062037
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  24062071 tagctcagttagtagggatattgcatattatatgt 24062037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 4960794 - 4960827
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  4960794 tagctcagttagtagggatattgcatattatatg 4960827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 31026222 - 31026262
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  31026222 gtgagcgtagctcagttggtagggatattgcatattatatg 31026262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 21388531 - 21388566
Alignment:
Q  198 cgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||||| |||||||||||||||||||||||    
T  21388531 cgtagctcagttggtagggatattgcatattatatg 21388566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 10244949 - 10244915
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  10244949 tagctcagttggtagggatattgcatattatatgt 10244915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 21066896 - 21066930
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  21066896 tagctcagttggtagggatattgcatattatatgt 21066930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 37300159 - 37300125
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  37300159 tagctcagttggtagggatattgcatattatatgt 37300125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 41699649 - 41699683
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||||||||||||||||||||| ||||||    
T  41699649 tagctcagttagtagggatattgcatatcatatgt 41699683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 47641055 - 47641089
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  47641055 tagctcagttggtagggatattgcatattatatgt 47641089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 47999790 - 47999824
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  47999790 tagctcagttggtagggatattgcatattatatgt 47999824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 2228985 - 2229018
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  2228985 tagctcagttggtagggatattgcatattatatg 2229018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 2681106 - 2681139
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  2681106 tagctcagttggtagggatattgcatattatatg 2681139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 9877327 - 9877294
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  9877327 tagctcagttggtagggatattgcatattatatg 9877294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 12640649 - 12640616
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  12640649 tagctcagttggtagggatattgcatattatatg 12640616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 12772125 - 12772158
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  12772125 tagctcagttggtagggatattgcatattatatg 12772158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 15238899 - 15238932
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  15238899 tagctcagttggtagggatattgcatattatatg 15238932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 19753028 - 19752995
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  19753028 tagctcagttggtagggatattgcatattatatg 19752995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 23102618 - 23102585
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  23102618 tagctcagttggtagggatattgcatattatatg 23102585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 24508828 - 24508869
Alignment:
Q  192 agtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    ||||| ||||| |||||| |||||||||||||||||||||||    
T  24508828 agtgagcgtagttcagttggtagggatattgcatattatatg 24508869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 24781040 - 24781073
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  24781040 tagctcagttggtagggatattgcatattatatg 24781073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 25833565 - 25833598
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  25833565 tagctcagttggtagggatattgcatattatatg 25833598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 27510317 - 27510284
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  27510317 tagctcagttggtagggatattgcatattatatg 27510284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 29617415 - 29617448
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  29617415 tagctcagttggtagggatattgcatattatatg 29617448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 30388567 - 30388534
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30388567 tagctcagttggtagggatattgcatattatatg 30388534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 30806125 - 30806158
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30806125 tagctcagttggtagggatattgcatattatatg 30806158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 32677002 - 32676969
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  32677002 tagctcagttggtagggatattgcatattatatg 32676969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 33996941 - 33996908
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  33996941 tagctcagttggtagggatattgcatattatatg 33996908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 35950138 - 35950171
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  35950138 tagctcagttggtagggatattgcatattatatg 35950171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 36174400 - 36174433
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  36174400 tagctcagttggtagggatattgcatattatatg 36174433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 36391964 - 36391931
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  36391964 tagctcagttggtagggatattgcatattatatg 36391931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 41084049 - 41084082
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  41084049 tagctcagttggtagggatattgcatattatatg 41084082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 41465844 - 41465877
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  41465844 tagctcagttggtagggatattgcatattatatg 41465877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 42443699 - 42443732
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  42443699 tagctcagttggtagggatattgcatattatatg 42443732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 44616612 - 44616645
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  44616612 tagctcagttggtagggatattgcatattatatg 44616645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 46534808 - 46534775
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  46534808 tagctcagttggtagggatattgcatattatatg 46534775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 12264057 - 12264097
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  12264057 gtgaacttagctcagttggtagggatattgcattttatatg 12264097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 32984277 - 32984245
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  32984277 tagctcagttggtagggatattgcatattatat 32984245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 36622177 - 36622217
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| ||||||| || |||||||||||||||||||||||    
T  36622177 gtgaacttagctcaattggtagggatattgcatattatatg 36622217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 36720117 - 36720149
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  36720117 tagctcagttggtagggatattgcatattatat 36720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 510966 - 510999
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  510966 tagctcagttagtagggatattgcatattatatg 510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1185 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 2440 - 2400
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  2440 gtgagcgtagctcagttggtagggatattgcatattatatg 2400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 12462 - 12502
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  12462 gtgagcgtagctcagttggtagggatattgcatattatatg 12502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 13263 - 13230
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  13263 tagctcagttggtagggatattgcatattatatg 13230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 11997 - 12037
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  11997 gtgaacttagctcagttggtagggatattgcatattatatg 12037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 46536 - 46569
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  46536 tagctcagttggtagggatattgcatattatatg 46569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 5966832 - 5966872
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  5966832 gtgagcgtagctcagttggtagggatattgcatattatatg 5966872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 43580881 - 43580921
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  43580881 gtgaacttagctcagttggtagggatattgcatattatatg 43580921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 42158885 - 42158924
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatat 232  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  42158885 gtgaacttagctcagtttgtagggatattgcatattatat 42158924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 12891567 - 12891601
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  12891567 tagctcagttggtagggatattgcatattatatgt 12891601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 39886272 - 39886238
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  39886272 tagctcagttggtagggatattgcatattatatgt 39886238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 1743137 - 1743170
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  1743137 tagctcagttggtagggatattgcatattatatg 1743170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 4417745 - 4417712
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4417745 tagctcagttggtagggatattgcatattatatg 4417712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 4745936 - 4745903
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4745936 tagctcagttggtagggatattgcatattatatg 4745903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 6518836 - 6518803
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6518836 tagctcagttggtagggatattgcatattatatg 6518803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8241060 - 8241093
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8241060 tagctcagttggtagggatattgcatattatatg 8241093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8968759 - 8968792
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8968759 tagctcagttggtagggatattgcatattatatg 8968792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 9835043 - 9835076
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  9835043 tagctcagttggtagggatattgcatattatatg 9835076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 11774519 - 11774486
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  11774519 tagctcagtttgtagggatattgcatattatatg 11774486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 11897258 - 11897291
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  11897258 tagctcagttggtagggatattgcatattatatg 11897291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 12463766 - 12463799
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  12463766 tagctcagttggtagggatattgcatattatatg 12463799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 16386801 - 16386768
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  16386801 tagctcagttggtagggatattgcatattatatg 16386768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 16603408 - 16603441
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  16603408 tagctcagttggtagggatattgcatattatatg 16603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17545232 - 17545199
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  17545232 tagctcagttggtagggatattgcatattatatg 17545199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 21918062 - 21918095
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  21918062 tagctcagttggtagggatattgcatattatatg 21918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 25400427 - 25400394
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  25400427 tagctcagttggtagggatattgcatattatatg 25400394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 25472643 - 25472610
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  25472643 tagctcagttggtagggatattgcatattatatg 25472610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 27765267 - 27765300
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  27765267 tagctcagttggtagggatattgcatattatatg 27765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 27798631 - 27798664
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  27798631 tagctcagttggtagggatattgcatattatatg 27798664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 28308244 - 28308277
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  28308244 tagctcagttggtagggatattgcatattatatg 28308277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 30571164 - 30571197
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30571164 tagctcagttggtagggatattgcatattatatg 30571197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 32505698 - 32505731
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  32505698 tagctcagttggtagggatattgcatattatatg 32505731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 35515522 - 35515555
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  35515522 tagctcagttggtagggatattgcatattatatg 35515555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40361639 - 40361606
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  40361639 tagctcagttggtagggatattgcatattatatg 40361606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 41179863 - 41179830
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  41179863 tagctcagttggtagggatattgcatattatatg 41179830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 42320327 - 42320360
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  42320327 tagctcagttggtagggatattgcatattatatg 42320360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 42525410 - 42525443
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  42525410 tagctcagttggtagggatattgcatattatatg 42525443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 27743775 - 27743735
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  27743775 gtgagcgtagctcagttggtagggatattgcatattatatg 27743735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 8144651 - 8144617
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  8144651 tagctcagtttgtagggatattgcatattatatgt 8144617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 39696397 - 39696363
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  39696397 tagctcagttggtagggatattgcatattatatgt 39696363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 40051632 - 40051666
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  40051632 tagctcagttggtagggatattgcatattatatgt 40051666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 40994163 - 40994129
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  40994163 tagctcagttggtagggatattgcatattatatgt 40994129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 233
Target Start/End: Complemental strand, 42134514 - 42134484
Alignment:
Q  203 ctcagttagtagggatattgcatattatatg 233  Q
    |||||||||||||||||||||||||||||||    
T  42134514 ctcagttagtagggatattgcatattatatg 42134484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 42218753 - 42218791
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattata 231  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  42218753 gtgaacttagctcagttggtagggatattgcatattata 42218791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 42381193 - 42381139
Alignment:
Q  180 tttgatctgtctagtgaacgtagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||| ||  |||||| |||||||||| ||||||||||||||| ||||||||    
T  42381193 tttgatctatcccgtgaacttagctcagttggtagggatattgcatgttatatgt 42381139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 627042 - 627009
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  627042 tagctcagttggtagggatattgcatattatatg 627009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 3847691 - 3847724
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  3847691 tagctcagttggtagggatattgcatattatatg 3847724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 6371124 - 6371157
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6371124 tagctcagttggtagggatattgcatattatatg 6371157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8965104 - 8965137
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8965104 tagctcagttggtagggatattgcatattatatg 8965137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 18424964 - 18424923
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatgt 234  Q
    |||||| || ||||||| ||||||||||||||||||||||||    
T  18424964 gtgaacttaactcagttggtagggatattgcatattatatgt 18424923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 21935487 - 21935520
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  21935487 tagctcagttggtagggatattgcatattatatg 21935520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 22230494 - 22230461
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  22230494 tagctcagttggtagggatattgcatattatatg 22230461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 22788734 - 22788701
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  22788734 tagctcagttggtagggatattgcatattatatg 22788701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 24680146 - 24680113
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  24680146 tagctcagttggtagggatattgcatattatatg 24680113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 26868359 - 26868392
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  26868359 tagctcagttggtagggatattgcatattatatg 26868392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 26919528 - 26919495
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  26919528 tagctcagttggtagggatattgcatattatatg 26919495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 30057232 - 30057265
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30057232 tagctcagttggtagggatattgcatattatatg 30057265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 30217609 - 30217642
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30217609 tagctcagttggtagggatattgcatattatatg 30217642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 34353789 - 34353822
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  34353789 tagctcagttggtagggatattgcatattatatg 34353822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 37935871 - 37935904
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  37935871 tagctcagttggtagggatattgcatattatatg 37935904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 39023185 - 39023218
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  39023185 tagctcagttggtagggatattgcatattatatg 39023218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 43147444 - 43147411
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  43147444 tagctcagttggtagggatattgcatattatatg 43147411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 43207679 - 43207712
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  43207679 tagctcagttggtagggatattgcatattatatg 43207712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 43596905 - 43596938
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  43596905 tagctcagttggtagggatattgcatattatatg 43596938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 43978018 - 43978051
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  43978018 tagctcagttggtagggatattgcatattatatg 43978051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 46105545 - 46105578
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  46105545 tagctcagttggtagggatattgcatattatatg 46105578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 46582644 - 46582677
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  46582644 tagctcagttggtagggatattgcatattatatg 46582677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 46775090 - 46775057
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  46775090 tagctcagttggtagggatattgcatattatatg 46775057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 48569236 - 48569203
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  48569236 tagctcagttggtagggatattgcatattatatg 48569203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 49901492 - 49901525
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  49901492 tagctcagttggtagggatattgcatattatatg 49901525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 54534836 - 54534869
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  54534836 tagctcagttggtagggatattgcatattatatg 54534869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 55251411 - 55251378
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  55251411 tagctcagttggtagggatattgcatattatatg 55251378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 3157284 - 3157244
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| ||||| |||||||||||||||||    
T  3157284 gtgaacttagctcagttggtaggaatattgcatattatatg 3157244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 4590256 - 4590288
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  4590256 tagctcagttggtagggatattgcatattatat 4590288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 8433683 - 8433651
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  8433683 tagctcagttggtagggatattgcatattatat 8433651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 12167683 - 12167643
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  12167683 gtgaacttaactcagttggtagggatattgcatattatatg 12167643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 25726369 - 25726337
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  25726369 tagctcagttggtagggatattgcatattatat 25726337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 31016348 - 31016380
Alignment:
Q  202 gctcagttagtagggatattgcatattatatgt 234  Q
    |||||||| ||||||||||||||||||||||||    
T  31016348 gctcagttggtagggatattgcatattatatgt 31016380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 51512068 - 51512036
Alignment:
Q  201 agctcagttagtagggatattgcatattatatg 233  Q
    ||||||||| |||||||||||||||||||||||    
T  51512068 agctcagttggtagggatattgcatattatatg 51512036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 56479293 - 56479253
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  56479293 gtgaacttaactcagttggtagggatattgcatattatatg 56479253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 10482920 - 10482880
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  10482920 gtgaacttagctcagttggtagggatattgcatattatatg 10482880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 11250658 - 11250618
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  11250658 gtgaacttagctcagttggtagggatattgcatattatatg 11250618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 19996519 - 19996479
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  19996519 gtgagcgtagctcagttggtagggatattgcatattatatg 19996479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 28689739 - 28689699
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  28689739 gtgaacttagctcagttggtagggatattgcatattatatg 28689699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 17602736 - 17602702
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  17602736 tagctcagttggtagggatattgcatattatatgt 17602702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 53163604 - 53163638
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  53163604 tagctcagttggtagggatattgcatattatatgt 53163638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 882399 - 882432
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  882399 tagctcagttggtagggatattgcatattatatg 882432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 2522936 - 2522969
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  2522936 tagctcagttggtagggatattgcatattatatg 2522969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 4139010 - 4139043
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4139010 tagctcagttggtagggatattgcatattatatg 4139043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 4640540 - 4640507
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4640540 tagctcagttggtagggatattgcatattatatg 4640507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 5636859 - 5636826
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  5636859 tagctcagttggtagggatattgcatattatatg 5636826  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 6920023 - 6919990
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6920023 tagctcagttggtagggatattgcatattatatg 6919990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 7269965 - 7269998
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  7269965 tagctcagttggtagggatattgcatattatatg 7269998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 7920330 - 7920363
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  7920330 tagctcagttggtagggatattgcatattatatg 7920363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8125649 - 8125682
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8125649 tagctcagttggtagggatattgcatattatatg 8125682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 9176646 - 9176613
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  9176646 tagctcagttggtagggatattgcatattatatg 9176613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 10176963 - 10176930
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10176963 tagctcagttggtagggatattgcatattatatg 10176930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 15975162 - 15975195
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  15975162 tagctcagttggtagggatattgcatattatatg 15975195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 17218498 - 17218531
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  17218498 tagctcagttggtagggatattgcatattatatg 17218531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 18194348 - 18194381
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  18194348 tagctcagttggtagggatattgcatattatatg 18194381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 19550516 - 19550549
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  19550516 tagctcagttggtagggatattgcatattatatg 19550549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 19999877 - 19999910
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  19999877 tagctcagttggtagggatattgcatattatatg 19999910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 22501991 - 22501958
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  22501991 tagctcagttggtagggatattgcatattatatg 22501958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 25938990 - 25938957
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  25938990 tagctcagttggtagggatattgcatattatatg 25938957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 26942763 - 26942796
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  26942763 tagctcagttggtagggatattgcatattatatg 26942796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 28550379 - 28550346
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  28550379 tagctcagttggtagggatattgcatattatatg 28550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 30779627 - 30779594
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30779627 tagctcagttggtagggatattgcatattatatg 30779594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 31327561 - 31327528
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  31327561 tagctcagttggtagggatattgcatattatatg 31327528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 31327778 - 31327745
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  31327778 tagctcagttggtagggatattgcatattatatg 31327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 31586957 - 31586990
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  31586957 tagctcagttggtagggatattgcatattatatg 31586990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 36625231 - 36625198
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  36625231 tagctcagttggtagggatattgcatattatatg 36625198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 37800671 - 37800638
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  37800671 tagctcagttggtagggatattgcatattatatg 37800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 39719945 - 39719978
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  39719945 tagctcagttggtagggatattgcatattatatg 39719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 39966134 - 39966101
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  39966134 tagctcagttggtagggatattgcatattatatg 39966101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 40192166 - 40192199
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  40192166 tagctcagttggtagggatattgcatattatatg 40192199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 40548313 - 40548346
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  40548313 tagctcagttggtagggatattgcatattatatg 40548346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40933891 - 40933858
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  40933891 tagctcagttggtagggatattgcatattatatg 40933858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 41936467 - 41936434
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  41936467 tagctcagttggtagggatattgcatattatatg 41936434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 42108242 - 42108209
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  42108242 tagctcagttggtagggatattgcatattatatg 42108209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 44652042 - 44652009
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  44652042 tagctcagttggtagggatattgcatattatatg 44652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 45701354 - 45701387
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  45701354 tagctcagttggtagggatattgcatattatatg 45701387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 47098742 - 47098775
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  47098742 tagctcagttggtagggatattgcatattatatg 47098775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 49447148 - 49447181
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  49447148 tagctcagttggtagggatattgcatattatatg 49447181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 50496874 - 50496841
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  50496874 tagctcagttggtagggatattgcatattatatg 50496841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 52410301 - 52410268
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  52410301 tagctcagttggtagggatattgcatattatatg 52410268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 52945905 - 52945938
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  52945905 tagctcagttggtagggatattgcatattatatg 52945938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 53347350 - 53347317
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  53347350 tagctcagttggtagggatattgcatattatatg 53347317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 4200652 - 4200612
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  4200652 gtgaacttaactcagttggtagggatattgcatattatatg 4200612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 11436507 - 11436547
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  11436507 gtgaacttaactcagttggtagggatattgcatattatatg 11436547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 45513055 - 45513023
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||||||| ||||||||||||||||||    
T  45513055 tagctcagttagtatggatattgcatattatat 45513023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 3438951 - 3438991
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  3438951 gtgagcgtagctcagttggtagggatattgcatattatatg 3438991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 17487707 - 17487747
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  17487707 gtgaacttagctcagttggtagggatattgcatattatatg 17487747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 234
Target Start/End: Original strand, 33669749 - 33669780
Alignment:
Q  203 ctcagttagtagggatattgcatattatatgt 234  Q
    ||||||||||||||||||||||||||||||||    
T  33669749 ctcagttagtagggatattgcatattatatgt 33669780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 233
Target Start/End: Complemental strand, 29942183 - 29942153
Alignment:
Q  203 ctcagttagtagggatattgcatattatatg 233  Q
    |||||||||||||||||||||||||||||||    
T  29942183 ctcagttagtagggatattgcatattatatg 29942153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 30392892 - 30392858
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  30392892 tagctcagttggtagggatattgcatattatatgt 30392858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 1500971 - 1501004
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  1500971 tagctcagttggtagggatattgcatattatatg 1501004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 1844827 - 1844860
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  1844827 tagctcagttggtagggatattgcatattatatg 1844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 2643707 - 2643740
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  2643707 tagctcagttggtagggatattgcatattatatg 2643740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 3446740 - 3446773
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  3446740 tagctcagttggtagggatattgcatattatatg 3446773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 4183186 - 4183219
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4183186 tagctcagttggtagggatattgcatattatatg 4183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 4562812 - 4562779
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4562812 tagctcagttggtagggatattgcatattatatg 4562779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 6331572 - 6331605
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6331572 tagctcagttggtagggatattgcatattatatg 6331605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 6636027 - 6635994
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6636027 tagctcagttggtagggatattgcatattatatg 6635994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 8250361 - 8250328
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8250361 tagctcagttggtagggatattgcatattatatg 8250328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 15764940 - 15764973
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  15764940 tagctcagttggtagggatattgcatattatatg 15764973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 18278477 - 18278444
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  18278477 tagctcagttggtagggatattgcatattatatg 18278444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 18694795 - 18694828
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  18694795 tagctcagttggtagggatattgcatattatatg 18694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 19281618 - 19281651
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  19281618 tagctcagttggtagggatattgcatattatatg 19281651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 19684083 - 19684116
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  19684083 tagctcagttggtagggatattgcatattatatg 19684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 22653704 - 22653671
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  22653704 tagctcagttggtagggatattgcatattatatg 22653671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 25857355 - 25857322
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  25857355 tagctcagttggtagggatattgcatattatatg 25857322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 28195194 - 28195161
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  28195194 tagctcagttggtagggatattgcatattatatg 28195161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 30390429 - 30390396
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  30390429 tagctcagttggtagggatattgcatattatatg 30390396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 33222221 - 33222180
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatgt 234  Q
    |||||| || ||||||| ||||||||||||||||||||||||    
T  33222221 gtgaacttaactcagttggtagggatattgcatattatatgt 33222180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 33228993 - 33228960
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  33228993 tagctcagttggtagggatattgcatattatatg 33228960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 34613989 - 34614022
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  34613989 tagctcagttggtagggatattgcatattatatg 34614022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 36182652 - 36182685
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  36182652 tagctcagttggtagggatattgcatattatatg 36182685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 38400320 - 38400353
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  38400320 tagctcagttggtagggatattgcatattatatg 38400353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 41509526 - 41509559
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  41509526 tagctcagttggtagggatattgcatattatatg 41509559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 44658340 - 44658373
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||||||||| |||||||||||||||||    
T  44658340 tagctcagttagtaggaatattgcatattatatg 44658373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 44857294 - 44857261
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  44857294 tagctcagttggtagggatattgcatattatatg 44857261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 44948606 - 44948639
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  44948606 tagctcagttggtagggatattgcatattatatg 44948639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 7281747 - 7281715
Alignment:
Q  201 agctcagttagtagggatattgcatattatatg 233  Q
    ||||||||| |||||||||||||||||||||||    
T  7281747 agctcagttggtagggatattgcatattatatg 7281715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 6130100 - 6130060
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  6130100 gtgagcgtagctcagttggtagggatattgcatattatatg 6130060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 46021946 - 46021906
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  46021946 gtgagcgtagctcagtaagtagggatattgcatattatatg 46021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 42054343 - 42054377
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  42054343 tagctcagttggtagggatattgcatattatatgt 42054377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 1570252 - 1570219
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  1570252 tagctcagttggtagggatattgcatattatatg 1570219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 2277764 - 2277797
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  2277764 tagctcagttggtagggatattgcatattatatg 2277797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 2556566 - 2556599
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  2556566 tagctcagttggtagggatattgcatattatatg 2556599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 3269629 - 3269662
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  3269629 tagctcagttggtagggatattgcatattatatg 3269662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 4482658 - 4482625
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4482658 tagctcagttggtagggatattgcatattatatg 4482625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 6438124 - 6438091
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6438124 tagctcagttggtagggatattgcatattatatg 6438091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 6702586 - 6702619
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  6702586 tagctcagttggtagggatattgcatattatatg 6702619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 7166287 - 7166254
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  7166287 tagctcagttggtagggatattgcatattatatg 7166254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8415739 - 8415772
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8415739 tagctcagttcgtagggatattgcatattatatg 8415772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8865864 - 8865897
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8865864 tagctcagttggtagggatattgcatattatatg 8865897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 9866244 - 9866211
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  9866244 tagctcagttggtagggatattgcatattatatg 9866211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 10664854 - 10664821
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10664854 tagctcagttggtagggatattgcatattatatg 10664821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 11215011 - 11215044
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  11215011 tagctcagttggtagggatattgcatattatatg 11215044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 12502314 - 12502281
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  12502314 tagctcagttggtagggatattgcatattatatg 12502281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 13538514 - 13538473
Alignment:
Q  192 agtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    ||||||| ||| |||||| |||||||||||||||||||||||    
T  13538514 agtgaacttagttcagttggtagggatattgcatattatatg 13538473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 13773178 - 13773211
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  13773178 tagctcagttggtagggatattgcatattatatg 13773211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 14349647 - 14349688
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatgt 234  Q
    |||||| |||||||||| |||| |||||||||||||||||||    
T  14349647 gtgaacttagctcagttggtagagatattgcatattatatgt 14349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 15819661 - 15819628
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  15819661 tagctcagttggtagggatattgcatattatatg 15819628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 16343038 - 16343071
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  16343038 tagctcagttggtagggatattgcatattatatg 16343071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 18467258 - 18467225
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  18467258 tagctcagttggtagggatattgcatattatatg 18467225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 19063393 - 19063360
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    ||||||||||||||| ||||||||||||||||||    
T  19063393 tagctcagttagtagagatattgcatattatatg 19063360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 21265666 - 21265699
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  21265666 tagctcagttggtagggatattgcatattatatg 21265699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 22563396 - 22563429
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  22563396 tagctcagttggtagggatattgcatattatatg 22563429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 25999860 - 25999893
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  25999860 tagctcagttggtagggatattgcatattatatg 25999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 26584806 - 26584773
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  26584806 tagctcagttggtagggatattgcatattatatg 26584773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 29188646 - 29188679
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  29188646 tagctcagttggtagggatattgcatattatatg 29188679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 32594261 - 32594294
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  32594261 tagctcagttggtagggatattgcatattatatg 32594294  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 33207215 - 33207248
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  33207215 tagctcagttggtagggatattgcatattatatg 33207248  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 33254738 - 33254771
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  33254738 tagctcagttggtagggatattgcatattatatg 33254771  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 33274910 - 33274943
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  33274910 tagctcagttggtagggatattgcatattatatg 33274943  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 34058224 - 34058257
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  34058224 tagctcagttggtagggatattgcatattatatg 34058257  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 35605683 - 35605650
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  35605683 tagctcagttggtagggatattgcatattatatg 35605650  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 37662617 - 37662584
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  37662617 tagctcagttggtagggatattgcatattatatg 37662584  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40375375 - 40375342
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  40375375 tagctcagttggtagggatattgcatattatatg 40375342  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40519604 - 40519571
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  40519604 tagctcagttggtagggatattgcatattatatg 40519571  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 40520840 - 40520873
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  40520840 tagctcagttggtagggatattgcatattatatg 40520873  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 42490470 - 42490437
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  42490470 tagctcagttggtagggatattgcatattatatg 42490437  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 43884804 - 43884837
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  43884804 tagctcagttggtagggatattgcatattatatg 43884837  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 46965750 - 46965783
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  46965750 tagctcagttggtagggatattgcatattatatg 46965783  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 47930731 - 47930698
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  47930731 tagctcagttggtagggatattgcatattatatg 47930698  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 50899570 - 50899537
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  50899570 tagctcagttggtagggatattgcatattatatg 50899537  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 52369607 - 52369640
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  52369607 tagctcagttggtagggatattgcatattatatg 52369640  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 1151769 - 1151801
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  1151769 tagctcagttggtagggatattgcatattatat 1151801  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 17580320 - 17580360
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  17580320 gtgaacttagctcagttggtagggatattgcatgttatatg 17580360  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 27818579 - 27818611
Alignment:
Q  200 tagctcagttagtagggatattgcatattatat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  27818579 tagctcagttggtagggatattgcatattatat 27818611  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 28867482 - 28867522
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| |||||||||| ||||| |||||||||||||||||    
T  28867482 gtgaacttagctcagttggtaggaatattgcatattatatg 28867522  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 65847 - 65813
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatgt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  65847 tagctcagttggtagggatattgcatattatatgt 65813  T

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Target: scaffold1372 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1372
Description:

Target: scaffold1372; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 1874 - 1907
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  1874 tagctcagttggtagggatattgcatattatatg 1907  T

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Target: scaffold0707 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 80 - 47
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  80 tagctcagttggtagggatattgcatattatatg 47  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8976 - 9009
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  8976 tagctcagttggtagggatattgcatattatatg 9009  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 4074 - 4041
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  4074 tagctcagttggtagggatattgcatattatatg 4041  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 920 - 887
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  920 tagctcagttggtagggatattgcatattatatg 887  T

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Target: scaffold0330 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 6771 - 6812
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatgt 234  Q
    |||||| || ||||||| ||||||||||||||||||||||||    
T  6771 gtgaacttaactcagttggtagggatattgcatattatatgt 6812  T

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Target: scaffold0187 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 11180 - 11147
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  11180 tagctcagttggtagggatattgcatattatatg 11147  T

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Target: scaffold0187; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 21508 - 21475
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  21508 tagctcagttggtagggatattgcatattatatg 21475  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 17630 - 17663
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  17630 tagctcagttggtagggatattgcatattatatg 17663  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 10886 - 10853
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  10886 tagctcagttggtagggatattgcatattatatg 10853  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 59793 - 59826
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  59793 tagctcagttggtagggatattgcatattatatg 59826  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 12321 - 12288
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  12321 tagctcagttggtagggatattgcatattatatg 12288  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 266757 - 266724
Alignment:
Q  200 tagctcagttagtagggatattgcatattatatg 233  Q
    |||||||||| |||||||||||||||||||||||    
T  266757 tagctcagttggtagggatattgcatattatatg 266724  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 23364 - 23404
Alignment:
Q  193 gtgaacgtagctcagttagtagggatattgcatattatatg 233  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  23364 gtgaacttaactcagttggtagggatattgcatattatatg 23404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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