View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17190_low_16 (Length: 232)
Name: NF17190_low_16
Description: NF17190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17190_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 45 - 213
Target Start/End: Complemental strand, 23145752 - 23145584
Alignment:
| Q |
45 |
cacccaaactaacatctcagacaaaaaacctaagatatcaaaggcccaaagatgctccaaaacaccgccacagtccaaaatcacactgcctagctcgaaa |
144 |
Q |
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| T |
23145752 |
caccaaaactaacatctcagccaaaaaacctaagatatcaaaggcccaaagatgctccaaaacaccgccacagtccaaaatcacactgcctaactcgaaa |
23145653 |
T |
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| Q |
145 |
ccacctgctgaatgcagaagactggccacaacagaacatgatctgcttacacacgcaggctaaagctaa |
213 |
Q |
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| T |
23145652 |
ccacctgctgaatgcagaagactggccacaacagaacatgatctgcttacacacgcaggctaaggctaa |
23145584 |
T |
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