View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17191_low_8 (Length: 244)
Name: NF17191_low_8
Description: NF17191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17191_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 226059 - 226291
Alignment:
| Q |
1 |
attatttattattaatatttggagatgatgttgcttttttaccacctaaccaccaatgattttaattttagccaaaactagaaaagcaatactacaatct |
100 |
Q |
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| T |
226059 |
attatttattattaatatttggagatgatgttgcttttttaccacctaaccaccaatgattttaattttagccaaaactagaaaagcaatactacaatct |
226158 |
T |
|
| Q |
101 |
attttaattttaccatccatagtgtacttgctggtccataggttgcagtaatggatgggttcccatattttggctgccagccccatcaccttcctcatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
226159 |
attttaattttaccatccatagtgtacttgctggtccataggttgcagtaatggatgggttcccatattttggctgccagccccatcaccttcctcatta |
226258 |
T |
|
| Q |
201 |
tccagaatcagaatcacattcttctatcttcat |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
226259 |
tccagaatcagaatcacattcttctatcttcat |
226291 |
T |
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