View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17195_high_21 (Length: 320)
Name: NF17195_high_21
Description: NF17195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17195_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 29068570 - 29068269
Alignment:
| Q |
1 |
gaatgtcagataaatgtctttgaatcattgtaatgaccaaaatataannnnnnnatgcattactgatgttttaaagagaagctaaacaaaaatgtaagtg |
100 |
Q |
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| T |
29068570 |
gaatgtcagataaatgtctttgaatcattgtaatgaccaaaatataatttttttatgcattactgatgttttaaagagaagctaaacaaaaatgtaagtg |
29068471 |
T |
|
| Q |
101 |
gaggtgttgttagttctttttaacacatgctaggtggcttgttgcacaaagaagcaaaaaattcataaatttaccaccctctataactactaatttgttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29068470 |
gaggtgttgttagttctttttaacacatgctaggtggcttgttgcacaaagaagcaaaaaattcataaatttaccaccctctataactactaatttgttt |
29068371 |
T |
|
| Q |
201 |
gaagtttaaattaaaattttatgtatgcagtcatgctgctggagtttctaatcaagtttgatgggatgcttcatatatagctccatcttgattttcgtat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29068370 |
gaagtttaaattaaaattttatgtatgcagtcatgctgctggagtttctaatcaagtttgatgggatgcttcatatatagctccatcttgattttcgtat |
29068271 |
T |
|
| Q |
301 |
gt |
302 |
Q |
| |
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|| |
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|
| T |
29068270 |
gt |
29068269 |
T |
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