View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17195_low_26 (Length: 313)
Name: NF17195_low_26
Description: NF17195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17195_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 33503663 - 33503963
Alignment:
| Q |
1 |
ttttcttctttctcctttgcttcagcttcctgcaaaaacctaagatgcttcatgatataataccaaataacttgattaattgcaggagaagaaacaaaac |
100 |
Q |
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| T |
33503663 |
ttttcttctttctcctttgcttcagcttcctgcaaaaacctaagatgcttcatgatataataccaaataacttgattaattgcaggagaagaaacaaaac |
33503762 |
T |
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| Q |
101 |
aaaattttaggtgcgaaatcttatttagatatgaaaagtcatagtgctgattgctgaagttgatatcatatgcactttaggccctagcagggtcaatttc |
200 |
Q |
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| T |
33503763 |
aaaattttaggtgcgaaatcttatttagatatgaaaagtcatagtgctgattgctgaagttgatatcatatgcactttaggccctagcagggtcaatttc |
33503862 |
T |
|
| Q |
201 |
aatttctagatttaatctcattctattcttaaacaagaccatggagtcgatgactagaagataatcaggaccctgttagataagctcataattaaactta |
300 |
Q |
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| T |
33503863 |
aatttctagatttaatctc-----attcttaaacaagaccatggagtcgatgactagaagataatcaggaccctgttagataagctcataattaaactta |
33503957 |
T |
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| Q |
301 |
tatatt |
306 |
Q |
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|||||| |
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| T |
33503958 |
tatatt |
33503963 |
T |
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