View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17196_low_47 (Length: 213)

Name: NF17196_low_47
Description: NF17196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17196_low_47
NF17196_low_47
[»] chr4 (31 HSPs)
chr4 (38-213)||(5112480-5112656)
chr4 (118-213)||(5268959-5269054)
chr4 (126-213)||(3777792-3777879)
chr4 (118-213)||(10047624-10047719)
chr4 (118-213)||(16623052-16623147)
chr4 (118-213)||(5396430-5396525)
chr4 (118-212)||(8689255-8689349)
chr4 (118-213)||(16628631-16628726)
chr4 (130-213)||(25861804-25861887)
chr4 (126-213)||(31985400-31985487)
chr4 (118-213)||(36314989-36315084)
chr4 (118-213)||(36329198-36329293)
chr4 (118-204)||(54867431-54867517)
chr4 (121-213)||(6743177-6743269)
chr4 (131-213)||(6542392-6542475)
chr4 (121-213)||(39774066-39774159)
chr4 (118-209)||(5143507-5143598)
chr4 (133-212)||(42599349-42599427)
chr4 (131-213)||(51336938-51337021)
chr4 (131-213)||(24334054-24334139)
chr4 (128-213)||(38152206-38152292)
chr4 (130-213)||(1983070-1983154)
chr4 (118-213)||(5147921-5148016)
chr4 (126-213)||(12739761-12739848)
chr4 (126-213)||(12747967-12748054)
chr4 (130-208)||(28468305-28468383)
chr4 (131-213)||(3793849-3793934)
chr4 (151-212)||(6677362-6677424)
chr4 (149-213)||(48893853-48893920)
chr4 (130-208)||(24742195-24742273)
chr4 (132-213)||(4587832-4587915)
[»] chr5 (20 HSPs)
chr5 (118-213)||(14520473-14520568)
chr5 (121-213)||(11181594-11181686)
chr5 (118-213)||(11916731-11916826)
chr5 (130-213)||(28832500-28832583)
chr5 (127-213)||(9353100-9353186)
chr5 (118-211)||(15464779-15464872)
chr5 (130-213)||(24553298-24553381)
chr5 (131-213)||(10281995-10282080)
chr5 (121-213)||(7160665-7160758)
chr5 (130-213)||(17003730-17003813)
chr5 (130-213)||(31300366-31300449)
chr5 (118-212)||(12083936-12084030)
chr5 (151-213)||(19588988-19589051)
chr5 (130-213)||(42127141-42127224)
chr5 (127-213)||(36932116-36932202)
chr5 (130-208)||(38219650-38219728)
chr5 (118-213)||(30683131-30683226)
chr5 (118-213)||(39468760-39468855)
chr5 (129-208)||(24136101-24136180)
chr5 (149-213)||(33030728-33030792)
[»] chr2 (32 HSPs)
chr2 (118-213)||(33528383-33528478)
chr2 (118-213)||(36757521-36757616)
chr2 (121-213)||(40015168-40015260)
chr2 (121-213)||(28258939-28259031)
chr2 (118-213)||(21630188-21630283)
chr2 (130-213)||(10445238-10445321)
chr2 (130-213)||(14698780-14698863)
chr2 (130-213)||(33118378-33118461)
chr2 (118-213)||(34389094-34389189)
chr2 (121-213)||(15903651-15903744)
chr2 (130-213)||(20522465-20522548)
chr2 (118-213)||(23078230-23078325)
chr2 (131-213)||(31056286-31056371)
chr2 (132-213)||(40739077-40739158)
chr2 (131-213)||(42269612-42269697)
chr2 (132-213)||(2837799-2837883)
chr2 (121-213)||(17865448-17865539)
chr2 (131-213)||(1344315-1344399)
chr2 (131-198)||(34682102-34682170)
chr2 (130-212)||(13569573-13569655)
chr2 (128-213)||(8389918-8390003)
chr2 (128-213)||(10707021-10707106)
chr2 (118-213)||(39284747-39284842)
chr2 (130-204)||(3492006-3492080)
chr2 (136-213)||(2869468-2869546)
chr2 (131-213)||(8040307-8040392)
chr2 (118-211)||(36988288-36988381)
chr2 (118-175)||(2837093-2837150)
chr2 (165-213)||(39483176-39483225)
chr2 (130-208)||(11098691-11098769)
chr2 (130-208)||(25409881-25409959)
chr2 (130-213)||(35397752-35397837)
[»] chr7 (25 HSPs)
chr7 (129-210)||(3047500-3047582)
chr7 (118-213)||(20284332-20284427)
chr7 (130-213)||(23402784-23402867)
chr7 (121-213)||(44847887-44847979)
chr7 (118-213)||(21989151-21989246)
chr7 (121-213)||(2479579-2479671)
chr7 (130-213)||(46516076-46516159)
chr7 (118-213)||(49091932-49092027)
chr7 (130-213)||(2580633-2580715)
chr7 (130-213)||(5817040-5817124)
chr7 (130-213)||(33332221-33332304)
chr7 (126-213)||(47263909-47263996)
chr7 (130-211)||(2647468-2647549)
chr7 (130-213)||(9189777-9189861)
chr7 (118-210)||(79634-79726)
chr7 (130-208)||(18409014-18409092)
chr7 (130-208)||(18413890-18413968)
chr7 (131-213)||(29160048-29160133)
chr7 (133-213)||(4796443-4796522)
chr7 (146-213)||(9184960-9185028)
chr7 (130-208)||(21640060-21640138)
chr7 (130-208)||(21646258-21646336)
chr7 (130-208)||(1533208-1533286)
chr7 (129-212)||(4253742-4253825)
chr7 (177-213)||(12098070-12098106)
[»] chr3 (43 HSPs)
chr3 (120-213)||(21711465-21711558)
chr3 (120-213)||(40592532-40592625)
chr3 (121-213)||(8370240-8370332)
chr3 (118-213)||(1736052-1736147)
chr3 (130-213)||(4386736-4386820)
chr3 (118-213)||(27974700-27974795)
chr3 (120-213)||(27986206-27986299)
chr3 (121-213)||(24694917-24695009)
chr3 (121-213)||(25929147-25929239)
chr3 (118-213)||(36029336-36029431)
chr3 (118-213)||(47923652-47923747)
chr3 (121-213)||(1417242-1417334)
chr3 (130-213)||(6794475-6794558)
chr3 (118-213)||(16264592-16264687)
chr3 (118-213)||(40844898-40844993)
chr3 (127-213)||(23392120-23392207)
chr3 (127-213)||(23410540-23410627)
chr3 (126-212)||(37725919-37726005)
chr3 (131-213)||(3715760-3715845)
chr3 (120-213)||(27453203-27453294)
chr3 (121-213)||(33386426-33386518)
chr3 (121-213)||(39032306-39032397)
chr3 (146-213)||(3323466-3323534)
chr3 (130-213)||(26299231-26299314)
chr3 (130-213)||(37466538-37466621)
chr3 (118-213)||(48438459-48438553)
chr3 (121-213)||(27026949-27027041)
chr3 (121-213)||(27038294-27038386)
chr3 (118-213)||(8126873-8126968)
chr3 (126-213)||(26928355-26928442)
chr3 (131-213)||(47649813-47649898)
chr3 (130-213)||(3328117-3328200)
chr3 (126-213)||(32143566-32143653)
chr3 (131-210)||(25796026-25796108)
chr3 (121-213)||(5373088-5373180)
chr3 (118-178)||(30709545-30709604)
chr3 (133-213)||(35925721-35925803)
chr3 (130-208)||(1306200-1306278)
chr3 (130-208)||(2671350-2671428)
chr3 (130-208)||(7167500-7167578)
chr3 (130-208)||(9091065-9091143)
chr3 (130-208)||(40372560-40372638)
chr3 (130-211)||(21353808-21353894)
[»] scaffold0087 (2 HSPs)
scaffold0087 (118-213)||(36591-36686)
scaffold0087 (118-213)||(43720-43815)
[»] chr8 (19 HSPs)
chr8 (118-213)||(4696367-4696462)
chr8 (118-213)||(5702239-5702334)
chr8 (118-213)||(7412583-7412678)
chr8 (121-213)||(4456271-4456363)
chr8 (126-213)||(19175521-19175608)
chr8 (126-213)||(23799343-23799430)
chr8 (118-213)||(5990321-5990415)
chr8 (120-213)||(3051363-3051457)
chr8 (120-213)||(28307805-28307899)
chr8 (130-213)||(19752165-19752248)
chr8 (131-213)||(9765622-9765706)
chr8 (118-213)||(12702849-12702944)
chr8 (118-213)||(30143204-30143299)
chr8 (130-208)||(1261721-1261799)
chr8 (131-213)||(26402997-26403083)
chr8 (132-212)||(3318761-3318842)
chr8 (118-209)||(42498056-42498147)
chr8 (130-208)||(18852931-18853009)
chr8 (133-212)||(9054193-9054273)
[»] chr1 (24 HSPs)
chr1 (130-213)||(47102610-47102693)
chr1 (118-213)||(29652056-29652151)
chr1 (130-213)||(47098596-47098679)
chr1 (128-213)||(37070010-37070095)
chr1 (131-213)||(47703704-47703789)
chr1 (118-213)||(22819674-22819768)
chr1 (118-213)||(3281950-3282045)
chr1 (118-213)||(9022665-9022760)
chr1 (118-213)||(13598643-13598738)
chr1 (118-213)||(13604381-13604476)
chr1 (118-213)||(21536329-21536424)
chr1 (118-213)||(26644657-26644752)
chr1 (130-213)||(9476505-9476588)
chr1 (130-213)||(32889681-32889764)
chr1 (130-212)||(27104173-27104254)
chr1 (131-213)||(19073171-19073256)
chr1 (131-213)||(19121061-19121146)
chr1 (131-213)||(40816585-40816670)
chr1 (130-212)||(17345331-17345414)
chr1 (130-208)||(19361200-19361278)
chr1 (130-208)||(19366075-19366153)
chr1 (130-208)||(19358611-19358689)
chr1 (130-208)||(24202536-24202614)
chr1 (129-213)||(50169421-50169505)
[»] scaffold0140 (1 HSPs)
scaffold0140 (118-213)||(8176-8271)
[»] scaffold0036 (1 HSPs)
scaffold0036 (126-213)||(85926-86013)
[»] chr6 (18 HSPs)
chr6 (121-213)||(22709253-22709345)
chr6 (118-213)||(5757237-5757332)
chr6 (126-213)||(24435739-24435825)
chr6 (118-205)||(18234334-18234421)
chr6 (126-213)||(21272756-21272843)
chr6 (130-213)||(31936818-31936901)
chr6 (131-213)||(21801113-21801198)
chr6 (128-213)||(31086243-31086328)
chr6 (129-213)||(5017266-5017350)
chr6 (130-213)||(5572014-5572097)
chr6 (130-213)||(31979755-31979838)
chr6 (118-195)||(10076950-10077027)
chr6 (121-185)||(23896624-23896687)
chr6 (121-213)||(22963942-22964034)
chr6 (121-213)||(23824359-23824451)
chr6 (118-213)||(9183242-9183337)
chr6 (123-209)||(31076699-31076786)
chr6 (177-213)||(3039114-3039150)
[»] scaffold0006 (3 HSPs)
scaffold0006 (118-213)||(5928-6023)
scaffold0006 (118-213)||(133038-133133)
scaffold0006 (118-213)||(2737-2831)
[»] scaffold0098 (1 HSPs)
scaffold0098 (121-213)||(45441-45534)
[»] scaffold0148 (1 HSPs)
scaffold0148 (131-213)||(10974-11059)
[»] scaffold0078 (1 HSPs)
scaffold0078 (129-213)||(23775-23860)
[»] scaffold0188 (2 HSPs)
scaffold0188 (130-208)||(17719-17797)
scaffold0188 (130-208)||(23812-23890)
[»] scaffold0176 (1 HSPs)
scaffold0176 (129-213)||(17494-17578)
[»] scaffold0016 (1 HSPs)
scaffold0016 (126-175)||(114460-114509)


Alignment Details
Target: chr4 (Bit Score: 116; Significance: 3e-59; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 38 - 213
Target Start/End: Complemental strand, 5112656 - 5112480
Alignment:
Q  38 cttgagtcgtaggtaacaatcgtgacacgattctgtcagttcatgcatactatatataagccacacagttcagnnnnnnnaggagagtttgaagagagag 137  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| |||||       ||||||| ||||||||||||    
T  5112656 cttgggtcgtaggtaacaatcgtgactcgactctgtcagttcatgcatactatatataagctacacaattcagtttttttaggagagcttgaagagagag 5112557  T
Q  138 aaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  5112556 aaacttgagattacaaaggaggtaattttaggtttgagtgtctttgttgtgaggttctcttgggttgggaaacattg 5112480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 5268959 - 5269054
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  5268959 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 5269054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 3777879 - 3777792
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  3777879 ttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 3777792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 10047719 - 10047624
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  10047719 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgggaaacattg 10047624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 16623052 - 16623147
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  16623052 aggagagctagaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 16623147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 5396430 - 5396525
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| | ||||||||||||||||| ||||||||||||||| |  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  5396430 aggagagctggaagagagagaaacttg-gattacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 5396525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 118 - 212
Target Start/End: Original strand, 8689255 - 8689349
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  |||||||| ||||| ||||| |||||| |||||||||||||||||||||    
T  8689255 aggagagcttgaagtgagagaaacttg-gattacaaaggaggtaactttagggtttagtgtctttgtagtgaggatctcttgggttgggaaacatt 8689349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 16628631 - 16628726
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| | ||||||||||||| ||| |||| ||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  16628631 aggagagctagaagagagagaaaattg-gattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 16628726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 25861804 - 25861887
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||| ||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  25861804 agagagagaaacttg-gattacaaagaaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 25861887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 31985400 - 31985487
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtg-ttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||||||||| ||||||  ||||| ||||||||||||||||||||||    
T  31985400 ttgaagagagagaaacttg-gattacaaaggagggaactttagggttgagtgtttttgtattgaggatctcttgggttgggaaacattg 31985487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 36314989 - 36315084
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||  |||||||| ||||| ||||| | |||| ||||||||||||||||||||||    
T  36314989 aggagagcttgaagagagataaacttg-gattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttgggaaacattg 36315084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 36329198 - 36329293
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||  |||||||| ||||| ||||| | |||| ||||||||||||||||||||||    
T  36329198 aggagagcttgaagagagataaacttg-gattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttgggaaacattg 36329293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 54867517 - 54867431
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgg 204  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||  |||||||||||||    
T  54867517 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttgggttgg 54867431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 6743177 - 6743269
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||||||  | ||| |||||||| ||||| | |||| ||||||||||||||||||||||    
T  6743177 agagcttgaagagagagaaacttg-gattacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatctcttgggttgggaaacattg 6743269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 6542475 - 6542392
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||| |  || ||||||||||||||  |||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  6542475 gagagagaaacctaggaatacaaaggaggtaactttagggttgagtgtctttgtaatgaggttctcttgggttgggaaacattg 6542392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 39774066 - 39774159
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgag-tgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||||||||||||| | |||||||||||||||  ||||||||||| |  |||||   |||||||||||| ||||||||||||||    
T  39774066 agagtttaaagagagagaaacttgggtttacaaaggaggtaactttagggttgagattatttgtaacgaggttctcttgagttgggaaacattg 39774159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 5143598 - 5143507
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaac 209  Q
    ||||||| ||||||  ||||||||||| ||||||| |||||||||  |||||||||||||| ||||| |||||| |||||||| |||||||||    
T  5143598 aggagagcttgaagtaagagaaacttg-gattacagaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgggaaac 5143507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 42599349 - 42599427
Alignment:
Q  133 gagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    |||||||||||| |||||||||||||||||  ||||| |||||||| ||||| ||||||||||||| ||||||||||||||    
T  42599349 gagagaaacttg-gattacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggttctcttcggttgggaaacatt 42599427  T

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Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 51336938 - 51337021
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||  || ||||||||| ||||  |||||||||| ||| ||||| |||||||||||||||||||| ||||||||    
T  51336938 gagagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttgtagtgaggttctcttgggttggaaaacattg 51337021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 24334139 - 24334054
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||| ||||||  ||||||||||| || ||||| |||||||||||||  ||||||||||||||||    
T  24334139 gagagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttgtagtgaggttctcttgagggttgggaaacattg 24334054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 38152206 - 38152292
Alignment:
Q  128 gaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||| ||  ||||||||| |||||||  |||||||||||||| ||||| |||||| ||||||||| ||||||| ||||    
T  38152206 gaagagagagaaaatttggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggatctcttgggatgggaaatattg 38152292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 1983070 - 1983154
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||| ||||| | |||||||| ||||||  |||||||||||||| ||||| |||||||| |||||||||| | |||||||    
T  1983070 agagagagagacttgggtttacaaagaaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgtgtaacattg 1983154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 5148016 - 5147921
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||  |||||||||||| ||||||| |||||||||  |||||||| ||||| ||||| || ||| ||||||| ||||||||||||||    
T  5148016 aggagagcttgaaatgagagaaacttg-gattacacaggaggtaactttagggtttagtgtctttgtagtaaggatctcttgagttgggaaacattg 5147921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 12739848 - 12739761
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||||||||   ||||||||||||  ||||||||||| || |||| |  || ||||||||||||||||||||||||    
T  12739848 ttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattaga-gttctcttgggttgggaaacattg 12739761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 12748054 - 12747967
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||||||||   ||||||||||||  ||||||||||| || |||| |  || ||||||||||||||||||||||||    
T  12748054 ttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattaga-gttctcttgggttgggaaacattg 12747967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 28468305 - 28468383
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||| ||||| ||||| |||||| |||||||||||||||||    
T  28468305 agagagagaaacttg-gattacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttgggttgggaaa 28468383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 3793849 - 3793934
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || || |||||||||||  |||||||||||||| ||| | |||||||||||||  ||||||| ||||||||    
T  3793849 gagagagaaacttgggaatataaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgagggttggaaaacattg 3793934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 6677362 - 6677424
Alignment:
Q  151 caaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||||||||  |||||||||||||| ||||||  | ||||||||||||||||||||||||    
T  6677362 caaaggaggtaactttagggttgagtgtctttgttcaggggttctcttgggttgggaaacatt 6677424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 48893920 - 48893853
Alignment:
Q  149 tacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    ||||||||||||||| | |||||||||||| ||||| |||||||||||||  ||||| ||||||||||    
T  48893920 tacaaaggaggtaatttgagggttgagtgtctttgtagtgaggttctctttagggtttggaaacattg 48893853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 24742273 - 24742195
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| || |  |||||||||||| ||||| | |||  |||||||||||||||||    
T  24742273 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaa 24742195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 4587832 - 4587915
Alignment:
Q  132 agagagaaacttgagattacaaaggaggtaatcttagggttgagtgt--tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||| |  || |||||| ||| |||  |||||||| |||||  ||||| ||||||||||| |||||||||||||||||    
T  4587832 agagagaaacctaggaatacaaatgagataactttagggttaagtgtcttttgtagtgaggttctcatgggttgggaaacattg 4587915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 14520568 - 14520473
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  14520568 aggagagcttgaagagagagaaactt-agattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 14520473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 11181594 - 11181686
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| | |||||||||||||||  ||| |||||||||| ||||| |||||||||||||||||||||||||||||    
T  11181594 agagcttgaagagagagaaacttg-gtttacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 11181686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 11916731 - 11916826
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  |||||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  11916731 aggagagcttgaagtgagagaaacttg-gattacaaaggaggtaactttagggttgagtttctttgtagtgaggatctcttgggttgggaaacattg 11916826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 28832583 - 28832500
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  28832583 agagagagaaacttg-gattacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 28832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 9353100 - 9353186
Alignment:
Q  127 tgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||||| |||||||||||||||||  |||||||| ||||| ||||| |||||| ||||||||||||||||||||||    
T  9353100 tgaagagagagaaacttg-gattacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttgggttgggaaacattg 9353186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 15464872 - 15464779
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacat 211  Q
    ||||||| ||||||||||||||||||| |||||||||| ||| ||  |||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  15464872 aggagagcttgaagagagagaaacttg-gattacaaagaaggaaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacat 15464779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 24553298 - 24553381
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||||||||| |||||||||||||||||  | |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  24553298 agagaaagaaacttg-gattacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 24553381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 10282080 - 10281995
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||| ||||| |||||||||||||  |||||| |||||||||    
T  10282080 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgtgaaacattg 10281995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 7160665 - 7160758
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| |||||||  |||||| ||| ||||||||| |||||||  |||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  7160665 agagcttgaagaatgagaaatttgggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggttctcttggattgggaaacattg 7160758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 17003730 - 17003813
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| ||||||||||||| |||  |||||||||| ||| ||||| |||||||||||||||||| ||||||||||    
T  17003730 agagagagaaacttg-gattacaaaggagataactttagggttgaatgtctttgtagtgaggttctcttgggtttggaaacattg 17003813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 31300366 - 31300449
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||| ||||||||||||  ||| |||||||||| ||||| ||||||||||||||||||| |||||||||    
T  31300366 agagagagaaacttg-gattgcaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgggttgagaaacattg 31300449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 212
Target Start/End: Original strand, 12083936 - 12084030
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||| | |||| |||||||||||| |||||||||||||||||  |||||||||||||| ||| | |||||| ||||||||||||| |||||||    
T  12083936 aggagagctagaagtgagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttggtaaacatt 12084030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 19589051 - 19588988
Alignment:
Q  151 caaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  19589051 caaaggaggtaattttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 19588988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 42127141 - 42127224
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| |||||||||| |||||||||||||||||  ||| |||||||| | ||||| ||||||||||||||||||| |||||||||    
T  42127141 agagtgagaaacttg-gattacaaaggaggtaactttaaggttgagtatctttgtagtgaggttctcttgggttgagaaacattg 42127224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 36932116 - 36932202
Alignment:
Q  127 tgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||||| |||| ||||||||| ||  |||||||||||||| ||| | |||| | ||||||||||||||||||||||    
T  36932116 tgaagagagagaaacttg-gattgcaaaggagggaactttagggttgagtgtctttatagtgatgatctcttgggttgggaaacattg 36932202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 38219728 - 38219650
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| |||||| |||||||||||||||||    
T  38219728 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 38219650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 30683226 - 30683131
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| ||   || |||||||||| ||||||||||| || |||| |  || |||||||||||||| |||||||||    
T  30683226 aggagagcttgaagagagagaaacttgggaaatcagaggaggtaattttagggttgagggtctttgattaga-gttctcttgggttgcgaaacattg 30683131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 39468855 - 39468760
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| ||   ||||||||||||  ||||||||||| || |||  |  || ||||||||||||||||||||||||    
T  39468855 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttcattaga-gttctcttgggttgggaaacattg 39468760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 24136180 - 24136101
Alignment:
Q  129 aagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    |||||||||||||||| |||||||||||||| || |  |||||||||||| ||||| |  ||  |||||||||||||||||    
T  24136180 aagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaaa 24136101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 33030728 - 33030792
Alignment:
Q  149 tacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||| |||||||  |||||||||||| ||||||   ||||||||||||||||| |||| ||||    
T  33030728 tacaaaagaggtaactttagggttgagtattttgtaacgaggttctcttgggttgagaaatattg 33030792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 33528383 - 33528478
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  33528383 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 33528478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 36757521 - 36757616
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  36757521 aggagagcttgaagtgagagaaacttga-attacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 36757616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 40015260 - 40015168
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||| ||  | |||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  40015260 agagcttgaagagagagaaatttaggtttacaaaggaggtaactttagggttgagtgttttgtattgaggttctcttgggttgggaaacattg 40015168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 28258939 - 28259031
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||| | |||||| ||||||||||||||||||||||    
T  28258939 agagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttgggaaacattg 28259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 21630283 - 21630188
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  |||| ||||||||| ||||| |||||| ||||||||||||||||||||||    
T  21630283 aggagagcttgaagggagagaaacttg-gattacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 21630188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 10445238 - 10445321
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||| ||||||||||||||||||  |||||||||| ||| ||||| |||||||||||| ||||||||||||||||    
T  10445238 agagagagaaactt-agattacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcgggttgggaaacattg 10445321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 14698780 - 14698863
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||| ||||||||||||||||    
T  14698780 agagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcgggttgggaaacattg 14698863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 33118461 - 33118378
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| |||||||||||||| |||||||    
T  33118461 agagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggggaacattg 33118378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 34389189 - 34389094
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||| | |||||||||||| |||||||||||||||||  ||||||||| |||| ||||| |||||| ||||||||||||||||||||||    
T  34389189 aggagagcttgatgtgagagaaacttg-gattacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatctcttgggttgggaaacattg 34389094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 15903651 - 15903744
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||| ||| | ||||||| ||||||| ||| ||||||| ||| ||||| |||||||||||||||||| ||||||||||    
T  15903651 agagcttgaagagagagaaatttgggtttacaaatgaggtaacctttgggttgaatgtctttgtagtgaggttctcttgggttaggaaacattg 15903744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 20522548 - 20522465
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||| ||||| |||||  |||||||||||||||| |||||    
T  20522548 agagagagaaactt-agattacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttgggttgggaagcattg 20522465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 23078230 - 23078325
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  || ||||||||||| |||||  ||||  ||||||||||||||||||||||    
T  23078230 aggagagcttgaagtgagagaaacttg-gattacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatctcttgggttgggaaacattg 23078325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 31056371 - 31056286
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||||||||||  | |||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  31056371 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 31056286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 40739158 - 40739077
Alignment:
Q  132 agagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  40739158 agagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 40739077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 42269697 - 42269612
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||||||||||  ||| |||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  42269697 gagagagaaacttgggaatacaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 42269612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 2837799 - 2837883
Alignment:
Q  132 agagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||| | ||| ||||||||||||||  |||||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  2837799 agagagaaacctaagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 2837883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 17865539 - 17865448
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||| |||| |||| |||||||||||||||||  |||||||||||||| ||||| |||| | ||||||||||||||||||||||    
T  17865539 agagcttgaagagacagaa-cttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaagatctcttgggttgggaaacattg 17865448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 1344315 - 1344399
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttg-ggttgggaaacattg 213  Q
    ||||||||||| |  || |||||| |||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  1344315 gagagagaaacctatgaatacaaatgaggtaattttagggttgagtgtctttgtagtgaggttctcttgaggttgggaaacattg 1344399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 34682102 - 34682170
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttg 198  Q
    |||||||||||||| || ||||||||||||||  |||||||||||||| ||||| ||||||||||||||    
T  34682102 gagagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttg 34682170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 13569655 - 13569573
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||||||||||| ||||||||| ||| |||  |||||||| ||||| ||||| |||||| |||||||||||||||||||||    
T  13569655 agagagagaaacttg-gattacaaatgagataactttagggttaagtgtctttgtagtgaggatctcttgggttgggaaacatt 13569573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 8389918 - 8390003
Alignment:
Q  128 gaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||| ||||||||||||| |||  ||||||||||| || ||||| |||| | ||||||||||| ||||||||||    
T  8389918 gaagagagagaaacttg-gattacaaaggagataactttagggttgagggtctttgtagtgatgatctcttgggttaggaaacattg 8390003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 10707021 - 10707106
Alignment:
Q  128 gaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||| ||||||||||||||||||  |||||||| | | | ||||| |||||| |||||||||||| |||||||||    
T  10707021 gaagagagagaaactt-agattacaaaggaggtaactttagggtttattatctttgtagtgaggatctcttgggttgagaaacattg 10707106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 39284747 - 39284842
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| ||   ||||||||||||  ||||||||||| || |||| |  || ||||||||||||||||||||||||    
T  39284747 aggagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaga-gttctcttgggttgggaaacattg 39284842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 3492080 - 3492006
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgg 204  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| |||||| |||||||||||||    
T  3492080 agagagagaaacttg-gattacaaaggagggaaatctagggttgagtgtctttgtagtgaggatctcttgggttgg 3492006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 2869468 - 2869546
Alignment:
Q  136 agaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||| | |||||||||| |||  ||| |||||||||| ||||| |||||||||||||| ||||| ||||||||    
T  2869468 agaaacttgaaaatacaaaggagataactttacggttgagtgtctttgtagtgaggttctcttgagttggaaaacattg 2869546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 8040392 - 8040307
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    ||||||||||||||  | ||||||||||||||  ||| |||||||||| ||||| |||| ||||||||  ||||||||||||||||    
T  8040392 gagagagaaacttggtaatacaaaggaggtaactttatggttgagtgtctttgtagtgaagttctcttgagggttgggaaacattg 8040307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 36988381 - 36988288
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacat 211  Q
    ||||||| ||||||||||||||||||| ||   ||||||||||||  ||||||||||| || |||| |  || ||||||||||||||||||||||    
T  36988381 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaga-gttctcttgggttgggaaacat 36988288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 2837150 - 2837093
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgag 175  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||| ||| |||||||    
T  2837150 aggagagtttgaagagagagaaacttgggaaatcaaaggaggtaattttaaggttgag 2837093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 39483225 - 39483176
Alignment:
Q  165 ttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  39483225 ttagggttgagtgtctttgttgtgaggatctcttgggttgggaaatattg 39483176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 11098691 - 11098769
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| || |  |||||||||||| ||||| | |||  |||||||||||||||||    
T  11098691 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaa 11098769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 25409959 - 25409881
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| ||||||| |||||| ||   ||||||||||||| ||||| | |||| |||||||||||||||||    
T  25409959 agagagagaaacttg-gattacagaggagggaacactagggttgagtgtctttgtagagaggatctcttgggttgggaaa 25409881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 35397837 - 35397752
Alignment:
Q  130 agagagagaaacttg-agattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| | | |||||||||||| |  |||||||||| ||| ||||| ||||||||||  |||||||| ||||||||    
T  35397837 agagagagaaacttgaaaaatacaaaggaggtcactttagggttgattgtctttgtagtgaggttcttctgggttggaaaacattg 35397752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 3047582 - 3047500
Alignment:
Q  129 aagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaaca 210  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  3047582 aagagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaaca 3047500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 20284427 - 20284332
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||  ||||||||||||||| ||||| |||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  20284427 aggagagttttgagagagagaaacttg-gattataaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 20284332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 23402784 - 23402867
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  23402784 agagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 23402867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 44847887 - 44847979
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| ||||| |||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  44847887 agagcttgaagagagagaaacttg-gattataaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 44847979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 21989246 - 21989151
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  ||||| |||||||| ||||| |||||| ||||||||||||||||||||||    
T  21989246 aggagagcttgaagtgagagaaacttg-gattacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 21989151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 2479671 - 2479579
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||| ||  |||||||||||||| ||| | |||||| ||||||||||||||||||||||    
T  2479671 agagcttgaagagagagaaacttg-gattacaaaggagggaactttagggttgagtgtctttatagtgaggatctcttgggttgggaaacattg 2479579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 46516076 - 46516159
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||| ||||||||||||||    
T  46516076 agagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgagttgggaaacattg 46516159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 49092027 - 49091932
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  ||| |||||||||| |||||  ||||| | ||||||||||||||||||||    
T  49092027 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttaaggttgagtgtctttgtactgaggatatcttgggttgggaaacattg 49091932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 2580715 - 2580633
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||| ||||||||||||  |||||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  2580715 agagagagaaacttg-gattgcaaaggaggtaactttagggttgagtgtctttgtgtgaggttctcttgggttggaaaacattg 2580633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 5817040 - 5817124
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| || ||||||||||||||  ||| |||||||||| ||||| |||||||||| || |||||||||||||||    
T  5817040 agagagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctatttggttgggaaacattg 5817124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 33332221 - 33332304
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtg-ttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||||||||| |||||||||||||||||  ||||||||||||| |||||| || |||||||||||||||| |||||||||    
T  33332221 agagatagaaacttg-gattacaaaggaggtaactttagggttgagtgtttttgtagtaaggttctcttgggttgagaaacattg 33332304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 47263996 - 47263909
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||||| ||||| |||||||||||  |||||||||||||| ||||| |||||  |||||| |||||||||||||||    
T  47263996 ttgaagagagagaaacttg-gattataaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttcggttgggaaacattg 47263909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 2647468 - 2647549
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacat 211  Q
    ||||||||||||||| || |||||||||| |||  |||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  2647468 agagagagaaacttg-gactacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacat 2647549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 9189777 - 9189861
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgtt--ttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||| |||||||| |||  |||||||||||||||  |||| || ||||||||||||||||||||||||||    
T  9189777 agagagagaaacttg-gattgcaaaggagataactttagggttgagtgttctttgtagtaaggttctcttgggttgggaaacattg 9189861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 79726 - 79634
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaaca 210  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  ||| | |||||||| ||||| |||||| ||| ||||||||| |||||    
T  79726 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttaagattgagtgtctttgtagtgaggatcttttgggttggaaaaca 79634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 18409092 - 18409014
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    |||||||||||||| ||||||||||||||| ||   ||||||||||||| ||||| |||||| |||||||||||||||||    
T  18409092 agagagagaaactt-agattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 18409014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 18413968 - 18413890
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| |||||| |||||||||||||||||    
T  18413968 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 18413890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 29160133 - 29160048
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||||||||||  || ||||||||||| ||| | |||||||||||||  ||||||||||||||||    
T  29160133 gagagagaaacttgggaatacaaaggaggtaacttttgggttgagtgtctttatagtgaggttctcttgagggttgggaaacattg 29160048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 4796443 - 4796522
Alignment:
Q  133 gagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||| |||||||||||||||||  ||||| |||||||| ||||| |||||| ||||||||||||| ||||||||    
T  4796443 gagagaaacttg-gattacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggatctcttgggttggaaaacattg 4796522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 9184960 - 9185028
Alignment:
Q  146 gattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||  |||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  9184960 gattgcaaaggaggtaactttagggttgagtatctttgtagtaaggttctcttgggttgggaaacattg 9185028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 21640138 - 21640060
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| | |||| |||||||||||||||||    
T  21640138 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaa 21640060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 21646336 - 21646258
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    |||||||||||||| ||||||||||||||| ||   ||||||||||||| ||||| | |||| |||||||||||||||||    
T  21646336 agagagagaaactt-agattacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaa 21646258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 1533208 - 1533286
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| || |  |||||||||||| ||||| | |||  |||||||||||||||||    
T  1533208 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaa 1533286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 4253825 - 4253742
Alignment:
Q  129 aagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    |||||||||||||||| ||   ||||||||||||  ||||||||||| || |||| || | |||||||||||||||| |||||||    
T  4253825 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttggtgag-ggttctcttgggttggaaaacatt 4253742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 12098106 - 12098070
Alignment:
Q  177 gttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  12098106 gttttcttgagaggttctcttgggttgggaaacattg 12098070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 21711558 - 21711465
Alignment:
Q  120 gagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  21711558 gagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 21711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 40592532 - 40592625
Alignment:
Q  120 gagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  40592532 gagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 40592625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 8370240 - 8370332
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  8370240 agagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 8370332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 1736052 - 1736147
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  1736052 aggagagtttggagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgggaaacattg 1736147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 4386736 - 4386820
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||| | ||||||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  4386736 agagagagaaacttgaaaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 4386820  T

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Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 27974700 - 27974795
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| |||||||||| |||||||||||    
T  27974700 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggtcgggaaacattg 27974795  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 27986206 - 27986299
Alignment:
Q  120 gagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  27986206 gagagttggaagagagagaaacttg-gattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 27986299  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 24694917 - 24695009
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  24694917 agagcttgaagagagagaaatttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 24695009  T

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Target: chr3; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 25929147 - 25929239
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||| ||||| |||||||||||||| ||||| ||||||||    
T  25929147 agagtttgaagtgagagaaactt-agattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagttggaaaacattg 25929239  T

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Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 36029431 - 36029336
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||  ||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  36029431 aggagagcttgaagtaagagaaacttg-gattacaaaggaggtaaatttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 36029336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 47923652 - 47923747
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  ||||| |||||||| ||||| |||||  ||||||||||||||||||||||    
T  47923652 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttaggattgagtgtctttgtagtgagaatctcttgggttgggaaacattg 47923747  T

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Target: chr3; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 1417242 - 1417334
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||  ||||||| |||||||| ||||||||||||||||  |||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  1417242 agagtttttagagagaaaaacttga-attacaaaggaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgggaaacattg 1417334  T

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Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 6794475 - 6794558
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgtt-ttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||  |||| |||||||||||||| ||||||||||||||    
T  6794475 agagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtcattgtagtgaggttctcttgagttgggaaacattg 6794558  T

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Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 16264687 - 16264592
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||  ||||||||||| |||||||||||||||||  |||||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  16264687 aggagagcttgaagtaagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgggaaacattg 16264592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 40844993 - 40844898
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||  |||||||||||||| ||||| |||||| ||| |||||||| |||||||||    
T  40844993 aggagagttttaagatagagaaactt-agattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgagaaacattg 40844898  T

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Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 23392207 - 23392120
Alignment:
Q  127 tgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||||| || | ||||||||  ||  |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  23392207 tgaagagagagaaacttgggactgcaaaggagagaaatttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 23392120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 23410627 - 23410540
Alignment:
Q  127 tgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||||| |||| ||||||||  ||  |||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  23410627 tgaagagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttgtagtgaggttctcttgggttggaaaacattg 23410540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 37726005 - 37725919
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||||||||||||||| |||||||||||||| ||  |||||||||||||| ||||| |||||| |||||||||| ||||||||||    
T  37726005 ttgaagagagagaaacttg-gattacaaaggaggaaactttagggttgagtgtctttgtagtgaggatctcttgggtggggaaacatt 37725919  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 3715760 - 3715845
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| ||| ||||| |||||||||||||  ||||||||||||||||    
T  3715760 gagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctcttgagggttgggaaacattg 3715845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 27453294 - 27453203
Alignment:
Q  120 gagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||  |||||||||||||| | || |||||| ||||||||||||| ||||||||    
T  27453294 gagagcttgaagagagagaaacttg-gattacaaaggagggaactttagggttgagtgtct-gtagtgaggatctcttgggttggcaaacattg 27453203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 33386426 - 33386518
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||  ||  |||||||||||||| ||||| |||||| |||||||||||| |||||||||    
T  33386426 agagcttgaagagagagaaacttg-gattacaaaggagagaactttagggttgagtgtctttgtagtgaggatctcttgggttgagaaacattg 33386518  T

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Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 39032306 - 39032397
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||| | ||||||||||||| ||||||||    
T  39032306 agagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtga-gatctcttgggttggtaaacattg 39032397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 3323466 - 3323534
Alignment:
Q  146 gattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||||  |||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  3323466 gattacaaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgggttgggaaacattg 3323534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 26299314 - 26299231
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| ||||| |||||||||||  |||||||||| ||| ||||| |||||| ||||||||||||||||||||||    
T  26299314 agagagagaaacttg-gattataaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttgggttgggaaacattg 26299231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 37466621 - 37466538
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||| | ||||||| ||||| ||||||||||||| |||||||||||||||    
T  37466621 agagagagaaacttg-gattacaaaggaggtaactttagagctgagtgtctttgtagtgaggttctcttaggttgggaaacattg 37466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 48438553 - 48438459
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||  |||||||||||||| ||||| || ||| |||||| |||||||||||||||    
T  48438553 aggagagcttgaatagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtaaggatctctt-ggttgggaaacattg 48438459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 27027041 - 27026949
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||| ||||||| |||||||||||||||||  |||||||||||||| |||||  ||||| |||||||| | |||||||||||    
T  27027041 agagcttgaagagagaaaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtactgaggatctcttggatagggaaacattg 27026949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 27038386 - 27038294
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||| ||||||| ||||||||||||| |||  |||||||||||||  ||||| |||||| |||||||||| |||||||||||    
T  27038386 agagcttgaagagagaaaaacttg-gattacaaaggagataactttagggttgagtgcctttgtagtgaggatctcttgggtagggaaacattg 27038294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 8126968 - 8126873
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||  ||||||||||||||| |||||||||| | ||||  |||  ||||||||| ||||| |||||||| ||||||||||||||||||||    
T  8126968 aggagagtttttagagagagaaacttg-gattacaaagaaagtaactttacagttgagtgtctttgtagtgaggttttcttgggttgggaaacattg 8126873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 26928355 - 26928442
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||| ||||||| ||||||||| |||| ||   ||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  26928355 ttgaagagagaaaaacttg-gattacaaacgagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 26928442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 47649898 - 47649813
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||| ||||||||| || |||||||||| |||  |||||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  47649898 gagatagaaacttgggaatacaaaggagataactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 47649813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 3328117 - 3328200
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| ||||| ||||||| |||  |||||||||| ||| ||||| ||||| |||||||||||||| ||||||||    
T  3328117 agagagagaaacttg-gattagaaaggagataactttagggttgaatgtctttgtagtgagcttctcttgggttggaaaacattg 3328200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 32143653 - 32143566
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| ||| |||||||||||||| ||   ||||||||||||| ||||| |||| | ||||||||||||| ||||||||    
T  32143653 ttgaagagagagaaatttg-gattacaaaggagggaactctagggttgagtgtctttgtagtgatgatctcttgggttggaaaacattg 32143566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 25796108 - 25796026
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaaca 210  Q
    |||||||||||||| || ||||||||||||||  | |||||||||||| ||||| |||||| ||||||  |||||||||||||    
T  25796108 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggctctcttgagggttgggaaaca 25796026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 5373088 - 5373180
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtga-ggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||| |   ||||||||||||  ||| ||||||| || || | |||| |||||||||||||||||||||||||    
T  5373088 agagtttcaagagagagaaacttgaaaaatcaaaggaggtaactttaaggttgagagtctt-tggtgaaggttctcttgggttgggaaacattg 5373180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 30709545 - 30709604
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt 178  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||  |||| |||||||||    
T  30709545 aggagagcttgaagagacagaaacttg-gattacaaaggaggtaactttagagttgagtgt 30709604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 35925803 - 35925721
Alignment:
Q  133 gagagaaacttgagattacaaaggag--gtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||| |||||||||||||  ||||  |||||||||| ||| ||||| |||||| ||| ||||||||||||||||||    
T  35925803 gagagaaacttg-gattacaaaggagatgtaactttagggttgaatgtctttgtagtgaggatcttttgggttgggaaacattg 35925721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 1306278 - 1306200
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| ||||| |||||||| ||   ||| ||||||||| ||||| |||||| |||||||||||||||||    
T  1306278 agagagagaaacttg-gattataaaggagggaactctagagttgagtgtctttgtagtgaggatctcttgggttgggaaa 1306200  T

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Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 2671350 - 2671428
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| || |  |||||||||||| ||||| | |||  |||||||||||||||||    
T  2671350 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaa 2671428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 7167578 - 7167500
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| ||| |||||||||| || |  |||||||||||| ||||||| |||  |||||||||||||||||    
T  7167578 agagagagaaacttg-gataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaa 7167500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 9091065 - 9091143
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| || |  |||||||||||| ||||| | |||  |||||||||||||||||    
T  9091065 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttgggttgggaaa 9091143  T

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Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 40372560 - 40372638
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| || |  |||||||||||| ||||| | |||  |||||||||||||||||    
T  40372560 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaa 40372638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 21353894 - 21353808
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttaggg--ttgagtgt-tttgttgtgaggttctctt--gggttgggaaacat 211  Q
    |||||||||||| |  || ||||||||||||||  ||||||  |||||||| ||||| |||||||||||||  ||||||||||||||    
T  21353894 agagagagaaacctaggaatacaaaggaggtaactttagggttttgagtgtctttgtagtgaggttctcttgagggttgggaaacat 21353808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 36591 - 36686
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  36591 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggaaaacattg 36686  T

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Target: scaffold0087; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 43720 - 43815
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  43720 aggagagctggaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgggaaacattg 43815  T

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Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 4696367 - 4696462
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  4696367 aggagagcttgaagagagagaaacttg-gattacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 4696462  T

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Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 5702239 - 5702334
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  5702239 aggagaggttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaatattg 5702334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 7412678 - 7412583
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| | |||| ||||||||||||||||||||||    
T  7412678 aggagagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttgggaaacattg 7412583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 4456363 - 4456271
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttt-tgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||| | ||| |||||| ||||||||||||||||||||||    
T  4456363 agagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctctgtagtgaggatctcttgggttgggaaacattg 4456271  T

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Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 19175521 - 19175608
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||| |||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| |||||||| |||||||||||||    
T  19175521 ttgaagtgagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgggaaacattg 19175608  T

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Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 23799343 - 23799430
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| | |||| |||||||||||||| |||||||    
T  23799343 ttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggggaacattg 23799430  T

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Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 5990321 - 5990415
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| | |||||||||||||||||  | |||||||  |||||  |||||||||||||| || | |||||||||||||||||||||||||||||    
T  5990321 aggagagctagaagagagagaaacttggaaatacaaagacggtaactttagggttgagtgtctt-tagtgaggttctcttgggttgggaaacattg 5990415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 3051457 - 3051363
Alignment:
Q  120 gagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||||||||||||||||||| || || |||||||  ||  |||||||||||||| ||||| ||| |||||||||| ||||||||||||||    
T  3051457 gagagcttgaagagagagaaacttgggactataaaggagagaactttagggttgagtgtctttgtagtggggttctcttgagttgggaaacattg 3051363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 28307899 - 28307805
Alignment:
Q  120 gagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||||||||||||||||||  |||||||||||||||||  |||| ||||||||| ||||| |   ||||||||| |||||||||||||||    
T  28307899 gagagcttgaagagagagaaacttaggattacaaaggaggtaactttagagttgagtgtctttgtagcacggttctcttaggttgggaaacattg 28307805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 19752165 - 19752248
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||  ||||||||||||  |||||||||||||| ||||| ||||||||||||||||||| |||| ||||    
T  19752165 agagagagaaacttg-gatcgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgtgaaatattg 19752248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 9765622 - 9765706
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||||||||||  | |||||||||||| ||   |||||||||||||  ||||||||||||||||    
T  9765622 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgagtgaggttctcttgagggttgggaaacattg 9765706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 12702944 - 12702849
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| ||   ||||||||||||  ||||||||||| || |||| |  || ||||||||||||||||||||||||    
T  12702944 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaaatttagggttgagggtctttgattaga-gttctcttgggttgggaaacattg 12702849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 30143204 - 30143299
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| ||   ||||||||||||  ||||||||||| || |||| |  || ||||||||||||||||||||||||    
T  30143204 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaga-gttctcttgggttgggaaacattg 30143299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 1261721 - 1261799
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| | |||| |||||||||||||||||    
T  1261721 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 1261799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 26402997 - 26403083
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaa-tcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    ||||||||||| |  || |||||||||||||| | |||||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  26402997 gagagagaaacctaggaatacaaaggaggtaacttttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 26403083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 3318842 - 3318761
Alignment:
Q  132 agagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||||| |||||| | |||| |||||||  ||||||||||| || |||| || |||||||||||||||| |||||||||    
T  3318842 agagagaaagttgagaattcaaatgaggtaactttagggttgagggtctttggtgggaggttctcttgggttaggaaacatt 3318761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 42498056 - 42498147
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaac 209  Q
    ||||||| ||||||||||||||||||| ||   ||||||||||||  ||||||||||| || |||| | | | ||||||||||||||||||||    
T  42498056 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat-taaagttctcttgggttgggaaac 42498147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 18852931 - 18853009
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| ||| |||||||||| || |  |||||||||||| ||||||| |||  |||||||||||||||||    
T  18852931 agagagagaaacttg-gataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaa 18853009  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 9054193 - 9054273
Alignment:
Q  133 gagagaaacttgagattacaaaggaggtaatcttagggttgagtgtttt-gttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||||||||  | ||||||  ||||||  ||||| ||||||||||| || ||||| |||||||||||||| |||||||    
T  9054193 gagagaaacttggaaatacaaataaggtaactttaggattgagtgtttttgtagtgagattctcttgggttggaaaacatt 9054273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 47102610 - 47102693
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  47102610 agagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattg 47102693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 29652151 - 29652056
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  29652151 aggagagcttgaaaagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgggaaacattg 29652056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 47098596 - 47098679
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| | |||||||||||||||||||||||||||    
T  47098596 agagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagcgaggttctcttgggttgggaaacattg 47098679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 37070095 - 37070010
Alignment:
Q  128 gaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||| |||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  37070095 gaagagagagaaacttg-gattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 37070010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 47703704 - 47703789
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  47703704 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 47703789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 22819768 - 22819674
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||||||  |||||| | |||||||||||||||  ||||| || ||||| ||||| |||||||||||||||||||||||||||||    
T  22819768 aggagagtttgaagagaga--aacttgggtttacaaaggaggtaactttaggatttagtgtctttgtagtgaggttctcttgggttgggaaacattg 22819674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 3282045 - 3281950
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||| |||||||||||| ||||||||| |||||||  ||| |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  3282045 aggagagcttgaagtgagagaaacttg-gattacaaatgaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 3281950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 9022665 - 9022760
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| | ||||||||||||| |||||  |||||| ||| ||||| ||||||||||||||||||| |||||||||    
T  9022665 aggagagcttgaagagagagaaacttgggtttacaaaggaggt-atcttttggttgaatgtctttgtagtgaggttctcttgggttgagaaacattg 9022760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 13598738 - 13598643
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  13598738 aggagagcttgaagagagagaaaattg-gattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaaacattg 13598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 13604381 - 13604476
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| || |||||||||||||||| |||||||||||||| ||  |||||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  13604381 aggagagcttaaagagagagaaacttg-gattacaaaggagggaactttagggttgagtatctttgtagtgaggatctcttgggttgggaaacattg 13604476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 21536329 - 21536424
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| |||||| |||||| ||||||||    
T  21536329 aggagagcttgaagtgagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttaggttggaaaacattg 21536424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 26644657 - 26644752
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||  |||||||||||||||||| ||||||||||||| |||| |||||||||||||| ||||| |||| | ||| ||||||||||||||||||    
T  26644657 aggagagcctgaagagagagaaacttg-gattacaaaggagataattttagggttgagtgtctttgtagtgaagatcttttgggttgggaaacattg 26644752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 9476588 - 9476505
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||||||||||||  || ||||||| ||| ||||| ||||||||||||| |||||||||||||||    
T  9476588 agagagagaaacttg-gattacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctctttggttgggaaacattg 9476505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 32889764 - 32889681
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||| ||||||||||||  |||||||||||||| ||||| |||||||| | ||||||||||||||||||    
T  32889764 agagagagaaacttg-gattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttgggttgggaaacattg 32889681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 27104173 - 27104254
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    ||||||||||||||| |||||||||||||||||  ||| |||||||||| ||||| |||||| |||||||||||||||||||||    
T  27104173 agagagagaaacttg-gattacaaaggaggtaactttaaggttgagtgtctttgtagtgagg-tctcttgggttgggaaacatt 27104254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 19073256 - 19073171
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||||||||||  | |||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  19073256 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 19073171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 19121146 - 19121061
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||||||||||  | |||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  19121146 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 19121061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 40816585 - 40816670
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||| || ||||||||||||||  | |||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  40816585 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 40816670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 17345331 - 17345414
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacatt 212  Q
    |||||| ||||| ||||| |||||||||||||   |||||||||||||| ||||| |||||||||||||| |||| ||||||||    
T  17345331 agagagggaaacatgagaatacaaaggaggtacatttagggttgagtgtctttgtagtgaggttctcttgagttgagaaacatt 17345414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 19361200 - 19361278
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    |||||||||||||| ||||||||||||||| ||   ||||||||||||| ||||| |||||| |||||||||||||||||    
T  19361200 agagagagaaactt-agattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 19361278  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 19366075 - 19366153
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| |||||| |||||||||||||||||    
T  19366075 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 19366153  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 19358611 - 19358689
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| |||||| ||| |||||||||||||    
T  19358611 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagtgaggatcttttgggttgggaaa 19358689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 24202536 - 24202614
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||||||| ||||| | |||  |||||||||||||||||    
T  24202536 agagagagaaacttg-gattacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaa 24202614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 50169505 - 50169421
Alignment:
Q  129 aagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||| | ||   ||||||||||||  ||||||||||| ||||| |  |  |||| ||||||||||||||||||||    
T  50169505 aagagagagaaactagggaaatcaaaggaggtaactttagggttgagggttttttattagggttatcttgggttgggaaacattg 50169421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 8176 - 8271
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| | ||||||||||||||||| |||||||||||||| ||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  8176 aggagagctggaagagagagaaacttg-gattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 8271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 86013 - 85926
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||| |||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  86013 ttgaagtgagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 85926  T

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Target: chr6 (Bit Score: 50; Significance: 8e-20; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 22709345 - 22709253
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||||||||||||| ||||||| |||||||||||||| ||   ||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  22709345 agagtttgaagagagaaaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 22709253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 5757237 - 5757332
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||  |||||||||||||| |||||  | ||| ||||||||||||||||||||||    
T  5757237 aggagagctggaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtatttaggatctcttgggttgggaaacattg 5757332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 24435739 - 24435825
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||| | ||||||||||||| |||  |||||||||||||| ||  ||||||||||||||| ||||||||||||||    
T  24435739 ttgaagagagagaaactag-gattacaaaggagataactttagggttgagtgtctttgtgtgaggttctcttgagttgggaaacattg 24435825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 18234421 - 18234334
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttggg 205  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||   |||||||||||||| ||||| |||||| ||||||||||||||    
T  18234421 aggagagcttgaagagaaagaaacttg-gattacaaaggaggtagctttagggttgagtgtctttgtagtgaggatctcttgggttggg 18234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 21272756 - 21272843
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||||| |||||||||||  ||||||||||| |||||  |||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  21272756 ttgaagtgagagaaacttt-gattacaaagggggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgcgaaacattg 21272843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 31936901 - 31936818
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||| ||||||||||||  |||||||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  31936901 agagagagaaacttg-gattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgggaaacattg 31936818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 21801113 - 21801198
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    ||||||||||||||||| ||||||| ||||||  | |||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  21801113 gagagagaaacttgagaatacaaagcaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 21801198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 31086243 - 31086328
Alignment:
Q  128 gaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||| ||||||||||| |||||  |||||||||||||| ||||| |||||| |||||| ||||| |||||||||    
T  31086243 gaagagagagaaacttg-gattacaaagggggtaactttagggttgagtgtctttgtagtgaggatctcttaggttgagaaacattg 31086328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 5017266 - 5017350
Alignment:
Q  129 aagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||| ||||||||| ||| |||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  5017266 aagaaagagaaacttg-gattacaaacgagataactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattg 5017350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 5572014 - 5572097
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| |||||||| ||||||||  ||||||||| |||| ||||| ||| || ||||||||||||||||||||||    
T  5572014 agagagagaaacttg-gattacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttgggttgggaaacattg 5572097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 31979838 - 31979755
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||| || | ||||||||||||  |||||||||||||| ||||| |||||||||| |||||||| |||||||||    
T  31979838 agagagagaaacttg-gactgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttcttttgggttgagaaacattg 31979755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 10076950 - 10077027
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctc 195  Q
    ||||||| || |||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||| ||||    
T  10076950 aggagagctttaagagagagaaacttg-gattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctc 10077027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 23896687 - 23896624
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgttttgttg 185  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||| ||||||||| ||||||    
T  23896687 agagcttgaagagagagaaacttg-gattacaaaggaggtaactttagagttgagtgtcttgttg 23896624  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 22964034 - 22963942
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||| ||||||||||||  ||||||||| ||| |||  |||||||||||||| ||||| |||| | |||||||| |||||||||||||    
T  22964034 agagcttgaaaagagagaaacttt-gattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaacattg 22963942  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 23824359 - 23824451
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||| ||||||||||||  ||||||||| ||| |||  |||||||||||||| ||||| |||| | |||||||| |||||||||||||    
T  23824359 agagcttgaaaagagagaaacttt-gattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaacattg 23824451  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 9183337 - 9183242
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||||||| ||   ||||||||||||  ||||||||||| || |||| |  || |||||| |||||||||||||||||    
T  9183337 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaga-gttctcctgggttgggaaacattg 9183242  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 31076699 - 31076786
Alignment:
Q  123 agtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaac 209  Q
    |||||||||||| ||||||||| || |||||||||| |||   ||||||||||||| ||||| |||| |||  ||||||||| |||||    
T  31076699 agtttgaagagaaagaaacttgggaatacaaaggagataactatagggttgagtgtctttgtagtgacgttgccttgggttgagaaac 31076786  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 3039150 - 3039114
Alignment:
Q  177 gttttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  3039150 gttttcttgagaggttctcttgggttgggaaacattg 3039114  T

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Target: scaffold0006 (Bit Score: 49; Significance: 3e-19; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 6023 - 5928
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  6023 aggagagcttgaagagagagaaaattg-gattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaaacattg 5928  T

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Target: scaffold0006; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 133038 - 133133
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| || |||||||||||||||| |||||||||||||| ||  |||||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  133038 aggagagcttaaagagagagaaacttg-gattacaaaggagggaactttagggttgagtttctttgtagtgaggatctcttgggttgggaaacattg 133133  T

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Target: scaffold0006; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 2831 - 2737
Alignment:
Q  118 aggagagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||| ||||||||||||||| ||| |||||||||  ||||||  |||||||| ||| | ||||| |||||| ||||||||||||||||||||||    
T  2831 aggagagcttgaagagagagaaa-ttg-gattacaaaaaaggtaactttagggttaagtttctttgtagtgaggatctcttgggttgggaaacattg 2737  T

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Target: scaffold0098 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 45534 - 45441
Alignment:
Q  121 agagtttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt--tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||||||||| |||  ||||| |||||| |||||||||||| |||||||||    
T  45534 agagcttgaagagagagaaacttg-gattacaaaggaggtaactttagggttgaatgtcttttgtagtgaggatctcttgggttgtgaaacattg 45441  T

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Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 11059 - 10974
Alignment:
Q  131 gagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctctt--gggttgggaaacattg 213  Q
    |||||||||||||  || ||||||||||||||  ||| |||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  11059 gagagagaaactttggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattg 10974  T

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Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 23860 - 23775
Alignment:
Q  129 aagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||||||||||||||||| ||||||||  ||| ||||||| || ||| | |||||||||| ||||||||| ||| ||||    
T  23860 aagagagagaaacttgagattacaatggaggtaactttaaggttgagcgtctttatagtgaggttctattgggttggaaaaaattg 23775  T

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Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 17719 - 17797
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| | |||| |||||||||||||||||    
T  17719 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaa 17797  T

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Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 23812 - 23890
Alignment:
Q  130 agagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaa 208  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||| ||||| | |||| |||||||||||||||||    
T  23812 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaa 23890  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 17578 - 17494
Alignment:
Q  129 aagagagagaaacttgagattacaaaggaggtaatcttagggttgagtgt-tttgttgtgaggttctcttgggttgggaaacattg 213  Q
    ||||||||||| |||| ||||||| |||||||||  ||| |||||||||| ||||| |||  | |||||||| |||||||||||||    
T  17578 aagagagagaaccttg-gattacataggaggtaactttacggttgagtgtctttgtagtggagatctcttggattgggaaacattg 17494  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 114460 - 114509
Alignment:
Q  126 ttgaagagagagaaacttgagattacaaaggaggtaatcttagggttgag 175  Q
    ||||||||||||||||||||||   ||||||||||||  |||||||||||    
T  114460 ttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgag 114509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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