View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17198_high_6 (Length: 565)

Name: NF17198_high_6
Description: NF17198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17198_high_6
NF17198_high_6
[»] chr3 (47 HSPs)
chr3 (9-258)||(53922015-53922266)
chr3 (263-525)||(53921718-53921981)
chr3 (437-525)||(32744641-32744729)
chr3 (445-514)||(29196627-29196696)
chr3 (437-490)||(44700742-44700795)
chr3 (436-508)||(9666700-9666772)
chr3 (445-520)||(29812936-29813011)
chr3 (329-386)||(7762005-7762060)
chr3 (441-491)||(26386730-26386780)
chr3 (445-518)||(40735256-40735329)
chr3 (327-363)||(36029519-36029555)
chr3 (445-525)||(39153576-39153656)
chr3 (327-363)||(44331308-44331344)
chr3 (327-363)||(46173254-46173290)
chr3 (328-363)||(4569473-4569508)
chr3 (328-363)||(27038467-27038502)
chr3 (328-363)||(29812803-29812838)
chr3 (328-363)||(31340653-31340688)
chr3 (328-363)||(37408199-37408234)
chr3 (436-491)||(40519447-40519502)
chr3 (328-363)||(49200062-49200097)
chr3 (445-520)||(51398687-51398762)
chr3 (328-363)||(55302576-55302611)
chr3 (329-363)||(5258537-5258571)
chr3 (329-363)||(6096211-6096245)
chr3 (446-520)||(7762140-7762214)
chr3 (329-363)||(27027131-27027165)
chr3 (328-389)||(27986102-27986161)
chr3 (329-363)||(29810609-29810643)
chr3 (329-363)||(40735170-40735204)
chr3 (440-525)||(5236671-5236756)
chr3 (436-525)||(5373087-5373176)
chr3 (327-356)||(16264781-16264810)
chr3 (327-356)||(24694790-24694819)
chr3 (520-565)||(29196630-29196675)
chr3 (327-356)||(40592406-40592435)
chr3 (329-393)||(40734239-40734301)
chr3 (329-393)||(47923530-47923592)
chr3 (329-380)||(7764193-7764242)
chr3 (327-363)||(8127056-8127092)
chr3 (327-363)||(21711627-21711663)
chr3 (328-356)||(27453389-27453417)
chr3 (328-387)||(33386301-33386358)
chr3 (328-387)||(37726078-37726135)
chr3 (327-363)||(39032180-39032216)
chr3 (446-490)||(44331429-44331473)
chr3 (327-363)||(54593225-54593261)
[»] chr7 (45 HSPs)
chr7 (437-525)||(19502043-19502131)
chr7 (437-514)||(12098098-12098175)
chr7 (437-525)||(24526112-24526200)
chr7 (437-508)||(41317679-41317750)
chr7 (437-491)||(31105642-31105696)
chr7 (439-525)||(43864111-43864197)
chr7 (437-514)||(36146648-36146725)
chr7 (437-525)||(2761517-2761605)
chr7 (437-525)||(6570459-6570547)
chr7 (328-378)||(2479748-2479796)
chr7 (437-491)||(30024981-30025035)
chr7 (440-525)||(4253745-4253830)
chr7 (329-385)||(19495712-19495766)
chr7 (330-363)||(30026393-30026426)
chr7 (327-363)||(2647332-2647368)
chr7 (445-525)||(4586034-4586114)
chr7 (296-356)||(6570301-6570361)
chr7 (327-363)||(21983668-21983704)
chr7 (445-525)||(31733184-31733264)
chr7 (445-525)||(36574731-36574811)
chr7 (445-525)||(38671437-38671517)
chr7 (445-525)||(48491452-48491532)
chr7 (448-491)||(26417192-26417235)
chr7 (328-363)||(27347663-27347698)
chr7 (328-363)||(43864001-43864036)
chr7 (328-363)||(44847762-44847797)
chr7 (438-525)||(47676351-47676438)
chr7 (328-363)||(47676529-47676564)
chr7 (329-363)||(1113397-1113431)
chr7 (437-491)||(18126509-18126563)
chr7 (329-386)||(23554781-23554836)
chr7 (296-366)||(46515912-46515982)
chr7 (327-356)||(2389813-2389842)
chr7 (520-565)||(12098101-12098146)
chr7 (329-366)||(14070223-14070260)
chr7 (329-366)||(14380251-14380288)
chr7 (329-366)||(49092113-49092150)
chr7 (445-525)||(1113530-1113610)
chr7 (437-489)||(8153194-8153246)
chr7 (440-520)||(14070053-14070133)
chr7 (440-520)||(14380081-14380161)
chr7 (437-525)||(31518660-31518748)
chr7 (441-492)||(40808459-40808510)
chr7 (328-387)||(47264046-47264103)
chr7 (328-356)||(47674343-47674371)
[»] chr1 (37 HSPs)
chr1 (437-525)||(23555480-23555568)
chr1 (437-525)||(45644570-45644658)
chr1 (437-525)||(50169425-50169513)
chr1 (437-525)||(13138189-13138277)
chr1 (296-387)||(16455354-16455443)
chr1 (437-508)||(50167420-50167491)
chr1 (437-491)||(28265815-28265869)
chr1 (437-490)||(777095-777148)
chr1 (445-525)||(3189204-3189284)
chr1 (445-525)||(3198021-3198101)
chr1 (445-525)||(3206860-3206940)
chr1 (440-491)||(15820175-15820226)
chr1 (438-525)||(28223636-28223723)
chr1 (438-520)||(28220446-28220528)
chr1 (437-491)||(31659103-31659157)
chr1 (439-525)||(37560084-37560170)
chr1 (436-490)||(49918213-49918267)
chr1 (452-525)||(834382-834455)
chr1 (437-525)||(10925088-10925176)
chr1 (327-363)||(13598826-13598862)
chr1 (328-387)||(13604259-13604316)
chr1 (327-363)||(29135789-29135825)
chr1 (327-363)||(37070193-37070229)
chr1 (299-363)||(46064629-46064693)
chr1 (437-525)||(46064783-46064871)
chr1 (436-503)||(8871297-8871364)
chr1 (446-525)||(44455034-44455113)
chr1 (445-491)||(3156739-3156785)
chr1 (329-394)||(15820048-15820111)
chr1 (329-363)||(29652239-29652273)
chr1 (445-491)||(40122447-40122493)
chr1 (293-363)||(49918054-49918124)
chr1 (432-525)||(197123-197216)
chr1 (327-356)||(3156606-3156635)
chr1 (327-356)||(16124295-16124324)
chr1 (327-387)||(21536206-21536264)
chr1 (445-525)||(3847336-3847416)
[»] chr6 (26 HSPs)
chr6 (299-391)||(9183377-9183467)
chr6 (296-356)||(21272593-21272653)
chr6 (437-491)||(9183280-9183334)
chr6 (329-378)||(16452709-16452756)
chr6 (437-491)||(26954534-26954588)
chr6 (437-514)||(3039142-3039218)
chr6 (327-395)||(5571899-5571965)
chr6 (299-356)||(24435579-24435636)
chr6 (327-363)||(10076826-10076862)
chr6 (327-363)||(18234509-18234545)
chr6 (327-363)||(26661470-26661506)
chr6 (327-363)||(26767441-26767477)
chr6 (299-363)||(26954696-26954760)
chr6 (327-363)||(31979943-31979979)
chr6 (328-363)||(3809320-3809355)
chr6 (329-375)||(5413831-5413875)
chr6 (329-375)||(16452823-16452867)
chr6 (329-363)||(5017133-5017167)
chr6 (329-386)||(5407280-5407335)
chr6 (329-363)||(31086110-31086144)
chr6 (329-386)||(33160726-33160781)
chr6 (520-565)||(3039145-3039190)
chr6 (328-365)||(5757115-5757152)
chr6 (437-525)||(31404888-31404977)
chr6 (328-356)||(22964131-22964159)
chr6 (328-356)||(23824234-23824262)
[»] chr4 (44 HSPs)
chr4 (437-514)||(46147581-46147658)
chr4 (436-514)||(36463628-36463706)
chr4 (440-525)||(9927672-9927757)
chr4 (445-525)||(12739765-12739845)
chr4 (445-525)||(12747971-12748051)
chr4 (432-488)||(37229988-37230044)
chr4 (440-508)||(45687428-45687496)
chr4 (292-363)||(41639051-41639122)
chr4 (438-525)||(52467570-52467657)
chr4 (328-393)||(25861669-25861732)
chr4 (439-525)||(52082872-52082958)
chr4 (439-520)||(52093884-52093965)
chr4 (437-490)||(56178886-56178939)
chr4 (327-363)||(5148103-5148139)
chr4 (327-363)||(5268835-5268871)
chr4 (437-525)||(5429544-5429632)
chr4 (327-363)||(8689132-8689168)
chr4 (437-525)||(26175851-26175939)
chr4 (327-363)||(36314865-36314901)
chr4 (327-363)||(36329074-36329110)
chr4 (445-525)||(48142915-48142995)
chr4 (439-491)||(52095611-52095663)
chr4 (437-525)||(54200121-54200209)
chr4 (296-363)||(24968818-24968885)
chr4 (328-363)||(37740366-37740401)
chr4 (301-363)||(3909810-3909871)
chr4 (329-363)||(16622931-16622965)
chr4 (440-490)||(21704078-21704128)
chr4 (523-565)||(37229968-37230010)
chr4 (329-363)||(52095753-52095787)
chr4 (523-565)||(52467587-52467629)
chr4 (328-392)||(5396327-5396389)
chr4 (327-356)||(6743050-6743079)
chr4 (445-490)||(24968984-24969029)
chr4 (330-363)||(27417562-27417595)
chr4 (520-565)||(46147584-46147629)
chr4 (327-363)||(3777974-3778010)
chr4 (448-488)||(3909983-3910023)
chr4 (333-392)||(12745782-12745839)
chr4 (445-525)||(13009646-13009726)
chr4 (432-484)||(31473798-31473850)
chr4 (445-525)||(37740499-37740579)
chr4 (327-363)||(50674457-50674493)
chr4 (327-363)||(54882561-54882597)
[»] chr8 (30 HSPs)
chr8 (437-525)||(42498059-42498147)
chr8 (300-366)||(3051544-3051610)
chr8 (296-366)||(10014867-10014937)
chr8 (445-525)||(3303885-3303965)
chr8 (437-525)||(15212651-15212739)
chr8 (437-525)||(30143207-30143295)
chr8 (437-508)||(5689136-5689207)
chr8 (328-366)||(4283068-4283106)
chr8 (327-392)||(4696263-4696326)
chr8 (445-491)||(29796572-29796618)
chr8 (452-525)||(4162380-4162453)
chr8 (445-525)||(4731531-4731611)
chr8 (437-489)||(10929666-10929718)
chr8 (437-525)||(12702853-12702941)
chr8 (445-525)||(43036296-43036376)
chr8 (446-525)||(4733683-4733762)
chr8 (328-363)||(15212526-15212561)
chr8 (329-375)||(34254711-34254755)
chr8 (445-508)||(40320940-40321003)
chr8 (328-363)||(42435602-42435637)
chr8 (437-491)||(1292712-1292766)
chr8 (436-490)||(30291456-30291510)
chr8 (445-491)||(41365096-41365142)
chr8 (437-490)||(1872173-1872226)
chr8 (436-525)||(18141684-18141773)
chr8 (445-525)||(6598845-6598925)
chr8 (445-525)||(6674298-6674378)
chr8 (445-525)||(33352023-33352103)
chr8 (437-521)||(34254547-34254631)
chr8 (292-356)||(43036127-43036191)
[»] chr2 (31 HSPs)
chr2 (436-508)||(36773413-36773485)
chr2 (440-508)||(11067160-11067228)
chr2 (437-525)||(36988290-36988378)
chr2 (438-525)||(2334632-2334719)
chr2 (445-525)||(11151806-11151886)
chr2 (445-525)||(11690374-11690454)
chr2 (327-363)||(17865603-17865639)
chr2 (327-363)||(20522648-20522684)
chr2 (328-375)||(28258814-28258859)
chr2 (327-363)||(34389276-34389312)
chr2 (444-520)||(36318229-36318305)
chr2 (327-363)||(36318402-36318438)
chr2 (437-525)||(38312105-38312193)
chr2 (445-525)||(39284758-39284838)
chr2 (296-356)||(40015339-40015399)
chr2 (445-525)||(42362225-42362305)
chr2 (329-387)||(2334788-2334844)
chr2 (328-363)||(2837237-2837272)
chr2 (329-375)||(5723637-5723681)
chr2 (329-375)||(45099496-45099540)
chr2 (460-494)||(3278280-3278314)
chr2 (437-491)||(6595255-6595309)
chr2 (329-363)||(14698646-14698680)
chr2 (523-565)||(33162682-33162724)
chr2 (329-363)||(36988468-36988502)
chr2 (327-356)||(39483309-39483338)
chr2 (327-363)||(10706888-10706924)
chr2 (445-525)||(14202622-14202702)
chr2 (327-363)||(21630371-21630407)
chr2 (327-363)||(23078107-23078143)
chr2 (445-525)||(33162665-33162745)
[»] scaffold0016 (1 HSPs)
scaffold0016 (438-508)||(114456-114526)
[»] chr5 (29 HSPs)
chr5 (437-503)||(16451946-16452012)
chr5 (445-525)||(13488076-13488156)
chr5 (437-525)||(28750870-28750958)
chr5 (327-366)||(12083813-12083852)
chr5 (328-386)||(13239492-13239548)
chr5 (328-366)||(535643-535681)
chr5 (437-491)||(39468798-39468852)
chr5 (437-490)||(42926758-42926811)
chr5 (445-525)||(3075873-3075953)
chr5 (440-499)||(5007419-5007478)
chr5 (445-525)||(5887631-5887711)
chr5 (327-363)||(14520655-14520691)
chr5 (445-525)||(31182846-31182926)
chr5 (328-363)||(9352971-9353006)
chr5 (328-363)||(13487943-13487978)
chr5 (328-363)||(27015054-27015089)
chr5 (437-488)||(32636689-32636740)
chr5 (328-363)||(36931986-36932021)
chr5 (327-366)||(39468922-39468961)
chr5 (328-363)||(42426628-42426663)
chr5 (440-490)||(9049605-9049655)
chr5 (329-378)||(36074424-36074471)
chr5 (329-386)||(37438887-37438942)
chr5 (437-491)||(37439013-37439067)
chr5 (437-491)||(42426484-42426538)
chr5 (445-490)||(16649872-16649917)
chr5 (327-356)||(16651022-16651051)
chr5 (437-490)||(42428680-42428733)
chr5 (327-363)||(19806145-19806181)
[»] scaffold0087 (2 HSPs)
scaffold0087 (327-387)||(36468-36526)
scaffold0087 (328-365)||(43598-43635)
[»] scaffold0140 (1 HSPs)
scaffold0140 (328-387)||(8054-8111)
[»] scaffold0006 (3 HSPs)
scaffold0006 (327-363)||(6111-6147)
scaffold0006 (328-387)||(132916-132973)
scaffold0006 (328-363)||(2919-2954)
[»] scaffold0098 (1 HSPs)
scaffold0098 (328-363)||(45624-45659)
[»] scaffold0014 (1 HSPs)
scaffold0014 (328-363)||(80894-80929)
[»] scaffold0466 (1 HSPs)
scaffold0466 (327-363)||(6848-6884)


Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 9 - 258
Target Start/End: Complemental strand, 53922266 - 53922015
Alignment:
Q  9 gtagcaaagggggaatcgaatgagagtttggtctgaggtctag--ttcgatcagtaaaacgaaaaaccatagaatgaacataattgtaagtgagaaacaa 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53922266 gtagctaagggggaatcgaatgagagtttggtctgaggtctagagttcgatcagtaaaacgaaaaaccatagaatgaacataattgtaagtgagaaacaa 53922167  T
Q  107 aagagacattgaaaaatgccgagtccatctactgattcacatttttatactgcctaaattattcaattattcatggagtaggtaattgttaattaagagt 206  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53922166 aagagacattgaaaaatgccgagtacatctactgattcacatttttatactgcctaaattattcaattattcatggagtaggtaattgttaattaagagt 53922067  T
Q  207 catttaggttaaatggttaatcgatacatgttgctatttgactcaataatgt 258  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  53922066 catttaggttaaatggttaatcgatatatgttgctatttgactcaaaaatgt 53922015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 263 - 525
Target Start/End: Complemental strand, 53921981 - 53921718
Alignment:
Q  263 tggcatgcagtgagtatggtgtttttt--gaggaaaatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtc 360  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||    
T  53921981 tggcatgcaatgagtatggtgtttttttggaggaaaatcgtgacacgatttttaatatgtttgacaagttttcaggataaggttggtcgtaccttgagtc 53921882  T
Q  361 gtatgcgcatcaatcatgacccgattttgacaactatagagtaatatttaagtgttttagttcannnnnnngagttagagcttaaagagagaaaaactag 460  Q
    ||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||        ||| ||||||| |||||||||||||| |    
T  53921881 gtatgcgcatcaatcgtgacacgattttgacagctatagagtattatttaagtgttttagttcattttttt-agtgagagcttgaagagagaaaaacttg 53921783  T
Q  461 agaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
     ||||||||| ||||||||||||||||||||  | |||||||| ||||| |||||||||||||||    
T  53921782 ggaaatcaaatgaggtaactttagggttgagagtctttgattagggttttcttgggttggaaaac 53921718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 32744729 - 32744641
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  32744729 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 32744641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 29196696 - 29196627
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttg 514  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||  | |||||||| ||||| ||||    
T  29196696 aagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 29196627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 490
Target Start/End: Complemental strand, 44700795 - 44700742
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  44700795 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttga 44700742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 508
Target Start/End: Complemental strand, 9666772 - 9666700
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    |||||||| |||||||| | ||||| ||||||||| ||||||||||||||||||||  | |||||||| ||||    
T  9666772 tagagcttcaagagagagacactagggaaatcaaatgaggtaactttagggttgagggtctttgattagggtt 9666700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 520
Target Start/End: Original strand, 29812936 - 29813011
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  ||||||||||    
T  29812936 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgg 29813011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 7762005 - 7762060
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgatt 386  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||| |||| |||||    
T  7762005 ttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatcgtgacacgatt 7762060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 491
Target Start/End: Complemental strand, 26386780 - 26386730
Alignment:
Q  441 cttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||||||| |||||| | ||||||||| ||||||||||||||||||||    
T  26386780 cttaaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgag 26386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 518
Target Start/End: Original strand, 40735256 - 40735329
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggtt 518  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  ||||||||    
T  40735256 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggtt 40735329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 36029555 - 36029519
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36029555 cgttttcaggataaggttggtcgtaccttgggtcgta 36029519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 39153656 - 39153576
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  39153656 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 39153576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 44331308 - 44331344
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  44331308 cgttttcaggataaggttggtcgtaccttgggtcgta 44331344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 46173254 - 46173290
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  46173254 cgttttcaggataaggttggtcgtaccttgggtcgta 46173290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 4569473 - 4569508
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4569473 gttttcaggataaggttggtcgtaccttgggtcgta 4569508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 27038502 - 27038467
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27038502 gttttcaggataaggttggtcgtaccttgggtcgta 27038467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 29812803 - 29812838
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29812803 gttttcaggataaggttggtcgtaccttgggtcgta 29812838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 31340688 - 31340653
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  31340688 gttttcaggataaggttggtcgtaccttgggtcgta 31340653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 37408199 - 37408234
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37408199 gttttcaggataaggttggtcgtaccttgggtcgta 37408234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 40519502 - 40519447
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    |||||||| |||||||| ||||| ||||||||||| ||| ||| ||||||||||||    
T  40519502 tagagcttcaagagagagaaacttgagaaatcaaatgagataattttagggttgag 40519447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 49200097 - 49200062
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  49200097 gttttcaggataaggttggtcgtaccttgggtcgta 49200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 520
Target Start/End: Original strand, 51398687 - 51398762
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    |||||| | ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||| ||||||||||    
T  51398687 aagagatagaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttttcttgggttgg 51398762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 55302611 - 55302576
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  55302611 gttttcaggataaggttggtcgtaccttgggtcgta 55302576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 5258571 - 5258537
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| |||||    
T  5258571 ttttcaggataaggttggtcgtaccttgaatcgta 5258537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 6096245 - 6096211
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  6096245 ttttcaggataaggttggtcgtaccttgggtcgta 6096211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 7762140 - 7762214
Alignment:
Q  446 agagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    ||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  ||||||||||    
T  7762140 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgg 7762214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 27027165 - 27027131
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  27027165 ttttcaggataaggttggtcgtaccttgggtcgta 27027131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 27986102 - 27986161
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttg 389  Q
    |||||||||||||||||||||||| |||| ||||||  || ||||||| |||| ||||||||    
T  27986102 gttttcaggataaggttggtcgtatcttgggtcgta--cgtatcaatcgtgacacgattttg 27986161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 29810609 - 29810643
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  29810609 ttttcaggataaggttggtcgtaccttgggtcgta 29810643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 40735170 - 40735204
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  40735170 ttttcaggataaggttggtcgtaccttgggtcgta 40735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 525
Target Start/End: Complemental strand, 5236756 - 5236671
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||| |||||||| ||||| | |||||| || ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  5236756 gcttgaagagagagaaacttgggaaatcgaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 5236671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 525
Target Start/End: Original strand, 5373087 - 5373176
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||| || |||||||| ||||| || |||||||| |||||||||||| |||||||  | |||| | ||||||  |||||||||| ||||    
T  5373087 tagagtttcaagagagagaaacttgaaaaatcaaaggaggtaactttaaggttgagagtctttggtgaaggttctcttgggttgggaaac 5373176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Complemental strand, 16264810 - 16264781
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  16264810 cgttttcaggataaggttggtcgtaccttg 16264781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 24694790 - 24694819
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  24694790 cgttttcaggataaggttggtcgtaccttg 24694819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 565
Target Start/End: Original strand, 29196630 - 29196675
Alignment:
Q  520 gaaaaccctaatcaaataccctaaaccctaacattacctcctttga 565  Q
    |||||||||||||||| ||||| ||||||||  |||||||||||||    
T  29196630 gaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga 29196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 40592406 - 40592435
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  40592406 cgttttcaggataaggttggtcgtaccttg 40592435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 40734239 - 40734301
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgacaa 393  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||| || | |||||| |||||    
T  40734239 ttttcaggataaggttggtcgtaccttggatcgta--cgcatcaatcgtgtcacgatttggacaa 40734301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 47923530 - 47923592
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgacaa 393  Q
    |||||||||||||||||||||||||||| || |||  |||||||||| || | |||||| |||||    
T  47923530 ttttcaggataaggttggtcgtaccttgggttgta--cgcatcaatcgtgtcacgatttggacaa 47923592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 7764193 - 7764242
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgac 380  Q
    |||| ||||||||||||||||||||||| ||||||  |||||||||| ||||    
T  7764193 tttttaggataaggttggtcgtaccttgggtcgta--cgcatcaatcgtgac 7764242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 8127092 - 8127056
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  8127092 cgttttcaggataaggttggtcgtatcttgggtcgta 8127056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 21711663 - 21711627
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  21711663 cgttttccggataaggttggtcgtaccttgggtcgta 21711627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 356
Target Start/End: Complemental strand, 27453417 - 27453389
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttg 356  Q
    |||||||||||||||||||||||||||||    
T  27453417 gttttcaggataaggttggtcgtaccttg 27453389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 33386301 - 33386358
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    |||||||||||||||||||||||| |||| ||||||  || ||||||| |||| ||||||    
T  33386301 gttttcaggataaggttggtcgtatcttgggtcgta--cgtatcaatcgtgacacgattt 33386358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 37726135 - 37726078
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    ||||||||||||||||||||||||| ||| ||||||  || ||||||| |||| ||||||    
T  37726135 gttttcaggataaggttggtcgtacattgggtcgta--cgtatcaatcgtgacacgattt 37726078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 39032180 - 39032216
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  39032180 cgttttcaggataaagttggtcgtaccttgggtcgta 39032216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 490
Target Start/End: Original strand, 44331429 - 44331473
Alignment:
Q  446 agagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| ||||| | ||||||||| |||||||||||||||||||    
T  44331429 agagagagaaacttgggaaatcaaaggaggtaactttagggttga 44331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 54593225 - 54593261
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  54593225 cgttttcaggataaggttggtcgtacattgggtcgta 54593261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 19502043 - 19502131
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  19502043 agagcttaaagagagacaaacttgagaaatcaaatgaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 19502131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 12098175 - 12098098
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttg 514  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||  | |||||||| ||||| ||||    
T  12098175 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 12098098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 24526200 - 24526112
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||  | |||||||| ||||  ||| |||||| ||||    
T  24526200 agagcttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattatggttctcttaggttgggaaac 24526112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 437 - 508
Target Start/End: Complemental strand, 41317750 - 41317679
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||  | |||||||| ||||    
T  41317750 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggtt 41317679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 31105696 - 31105642
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  31105696 agagcttcaagagaggaaaacttgagaaatcaaaggaggtaactttagggttgag 31105642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 439 - 525
Target Start/End: Original strand, 43864111 - 43864197
Alignment:
Q  439 agcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  43864111 agcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 43864197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 36146725 - 36146648
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttg 514  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||||| ||||||  | |||||||| ||||| ||||    
T  36146725 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagtgttgagggtctttgattatggttttcttg 36146648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 2761605 - 2761517
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| |||||||||||||||||||  || ||||||||  |||  |||||||||| ||||    
T  2761605 agagcttgaagagagataaacttgggaaatcaaaggaggtaactttagggttgatgatatttgattagagttctcttgggttgggaaac 2761517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 6570459 - 6570547
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||||||||| | |||||| ||||||||||| |||||||||||||| |||||| | ||||| || ||||  |||||| ||| ||||    
T  6570459 agagcttaaagaggggaaaacttgagaaatcaaaggaggtaactttaggattgagtgtctttgactagggttctcttggggtgggaaac 6570547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 2479796 - 2479748
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatg 378  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  2479796 gttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatcatg 2479748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 30025035 - 30024981
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  30025035 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 30024981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 440 - 525
Target Start/End: Complemental strand, 4253830 - 4253745
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | |||| | | ||||  |||||||||||||||    
T  4253830 gctttaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttggtgagggttctcttgggttggaaaac 4253745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 19495712 - 19495766
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgat 385  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||| |||| ||||    
T  19495712 ttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatcgtgacacgat 19495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 30026426 - 30026393
Alignment:
Q  330 tttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||||||||    
T  30026426 tttcaggataaggttggtcgtaccttgagtcgta 30026393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 2647332 - 2647368
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  2647332 cgttttcaggataaggttggtcgtaccttgggtcgta 2647368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 4586034 - 4586114
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||||||||| | ||||||||| || |||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  4586034 aagagagaaaaacttgggaaatcaaaggatgtaactttagggttgaggctctttgattagagttctcttgggttgggaaac 4586114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 6570301 - 6570361
Alignment:
Q  296 aatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttg 356  Q
    |||||||||||||||||||  ||| ||| | |||||| |||||||||||| ||||||||||    
T  6570301 aatcgtgacacgatttttggcatgcttgacacgtttttaggataaggttgatcgtaccttg 6570361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 21983704 - 21983668
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  21983704 cgttttcaggataaggttggtcgtaccttgggtcgta 21983668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 31733264 - 31733184
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| ||||||||||| ||||||||||||| ||||||  | ||||||||  |||  |||||||||| ||||    
T  31733264 aagagagagaaacttgagaaatcaaaagaggtaactttagagttgagggtctttgattagagttctcttgggttgggaaac 31733184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 36574811 - 36574731
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||| | ||||||||||| |||||||||||||||||||   | |||||| | ||||  |||||||||||||||    
T  36574811 aagagagagaaaattgagaaatcaaaggaggtaactttagggttgacggtctttgatgagggttctcttgggttggaaaac 36574731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 38671517 - 38671437
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  38671517 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 38671437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 48491452 - 48491532
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| || |||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  48491452 aagagagagaaacttgataaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 48491532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 491
Target Start/End: Original strand, 26417192 - 26417235
Alignment:
Q  448 agagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||    
T  26417192 agagataaacttgagaaatcaaaggaggtaactttagggttgag 26417235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 27347663 - 27347698
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27347663 gttttcaggataaggttggtcgtaccttgggtcgta 27347698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 43864001 - 43864036
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  43864001 gttttcaggataaggttggtcgtaccttgggtcgta 43864036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 44847762 - 44847797
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  44847762 gttttcaggataaggttggtcgtaccttgggtcgta 44847797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 47676438 - 47676351
Alignment:
Q  438 gagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||| |||||||| ||||| | ||||||||| ||| ||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  47676438 gagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggttgggaaac 47676351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 47676564 - 47676529
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  47676564 gttttcaggataaggttggtcgtaccttgggtcgta 47676529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 1113397 - 1113431
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  1113397 ttttcaggataaggttggtcgtaccttgggtcgta 1113431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 18126509 - 18126563
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| || ||||| ||||| | ||||||||| ||||||||||||||||||||    
T  18126509 agagcttgaatagagagaaacttgggaaatcaaaggaggtaactttagggttgag 18126563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 23554781 - 23554836
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgatt 386  Q
    |||||||||||||||||||||||| ||| ||||||  |||||||||| |||| |||||    
T  23554781 ttttcaggataaggttggtcgtacattgggtcgta--cgcatcaatcgtgacacgatt 23554836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 366
Target Start/End: Original strand, 46515912 - 46515982
Alignment:
Q  296 aatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    ||||||| |||||||||||   |||| | | ||||||||||||||||||||||  |||||| |||||||||    
T  46515912 aatcgtgtcacgatttttggcttgttgggcacgttttcaggataaggttggtcacaccttgggtcgtatgc 46515982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 2389813 - 2389842
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  2389813 cgttttcaggataaggttggtcgtaccttg 2389842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 565
Target Start/End: Original strand, 12098101 - 12098146
Alignment:
Q  520 gaaaaccctaatcaaataccctaaaccctaacattacctcctttga 565  Q
    |||||||||||||||| ||||| ||||||||  |||||||||||||    
T  12098101 gaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga 12098146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 14070260 - 14070223
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  14070260 ttttcaagataaggttggtcgtaccttgggtcgtatgc 14070223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 14380288 - 14380251
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  14380288 ttttcaagataaggttggtcgtaccttgggtcgtatgc 14380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 49092150 - 49092113
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  49092150 ttttcaggataaggttggtcgtaccttggatcgtatgc 49092113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 1113530 - 1113610
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| || |||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  1113530 aagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 1113610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 489
Target Start/End: Original strand, 8153194 - 8153246
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttg 489  Q
    ||||||| |||||||| |||||||  |||||||| |||||||||||| |||||    
T  8153194 agagcttcaagagagagaaactaggaaaatcaaaggaggtaactttaaggttg 8153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 14070133 - 14070053
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    |||| |||||||| ||||| | ||||||||| ||||||||||||||| ||||  | ||||||||  |||  ||||||||||    
T  14070133 gcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtctttgattagagttctcttgggttgg 14070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 14380161 - 14380081
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    |||| |||||||| ||||| | ||||||||| ||||||||||||||| ||||  | ||||||||  |||  ||||||||||    
T  14380161 gcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtctttgattagagttctcttgggttgg 14380081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 31518660 - 31518748
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| ||||||| ||||||   ||||||||| ||| ||||||||||||| ||  | |||||||| ||||   ||||||||||||||    
T  31518660 agagcttcaagagaggaaaactttggaaatcaaaggagataactttagggttaagggtctttgattatggttcttttgggttggaaaac 31518748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 492
Target Start/End: Original strand, 40808459 - 40808510
Alignment:
Q  441 cttaaagagagaaaaact-agagaaatcaaacgaggtaactttagggttgagt 492  Q
    |||||||||||| ||||| |||||| ||||| |||||||||||||||||||||    
T  40808459 cttaaagagagataaacttagagaa-tcaaaggaggtaactttagggttgagt 40808510  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 47264103 - 47264046
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    |||||||||||||||||||||||| |||| ||||||  || ||||||| |||| ||||||    
T  47264103 gttttcaggataaggttggtcgtatcttgggtcgta--cgtatcaatcttgacacgattt 47264046  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 356
Target Start/End: Complemental strand, 47674371 - 47674343
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttg 356  Q
    |||||||||||||||||||||||||||||    
T  47674371 gttttcaggataaggttggtcgtaccttg 47674343  T

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Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 23555568 - 23555480
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||||||||| | ||||||||| |||||||||| ||||||||| || ||||||||| |||  |||||||||| ||||    
T  23555568 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaacttcagggttgaggatctttgattaaagttctcttgggttgggaaac 23555480  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 45644658 - 45644570
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||  | |||||||| ||||  ||| |||||||||||    
T  45644658 agagcttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattagggttctcttaggttggaaaac 45644570  T

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Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 50169513 - 50169425
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||  ||||| |||| ||||  |||||||||| ||||    
T  50169513 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggttttttattagggttatcttgggttgggaaac 50169425  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 13138277 - 13138189
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||  | |||||||| ||||  |||||| ||| ||||    
T  13138277 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttggggtgggaaac 13138189  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 387
Target Start/End: Original strand, 16455354 - 16455443
Alignment:
Q  296 aatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    |||||||||| |||||||| |||||||| | ||||||||||||||| ||| |||||||||| ||||||  |||||||| | |||| ||||||    
T  16455354 aatcgtgacatgatttttggtatgtttggcacgttttcaggataagtttgctcgtaccttgggtcgta--cgcatcaaccgtgacacgattt 16455443  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 437 - 508
Target Start/End: Complemental strand, 50167491 - 50167420
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||  | |||||||| ||||    
T  50167491 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggtt 50167420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 28265869 - 28265815
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  28265869 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgag 28265815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 490
Target Start/End: Original strand, 777095 - 777148
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  777095 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttga 777148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 3189204 - 3189284
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  3189204 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 3189284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 3198021 - 3198101
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  3198021 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 3198101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 3206860 - 3206940
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  3206860 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 3206940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 491
Target Start/End: Original strand, 15820175 - 15820226
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    |||| |||||||||||||| | ||||||||| ||||||||||||||||||||    
T  15820175 gcttcaagagagaaaaacttgggaaatcaaaagaggtaactttagggttgag 15820226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 28223723 - 28223636
Alignment:
Q  438 gagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  28223723 gagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 28223636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 28220528 - 28220446
Alignment:
Q  438 gagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    |||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  ||||||||||    
T  28220528 gagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgg 28220446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 31659103 - 31659157
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  31659103 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 31659157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 525
Target Start/End: Complemental strand, 37560170 - 37560084
Alignment:
Q  439 agcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||| |||||||| ||||| ||||||||||| |||||||||||| |||||||  | ||||||||  |||  |||||||| ||||||    
T  37560170 agcttgaagagagagaaacttgagaaatcaaatgaggtaactttaaggttgagggtctttgattagagttctcttgggtttgaaaac 37560084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 490
Target Start/End: Original strand, 49918213 - 49918267
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    |||||||| |||||||| ||||| | ||||||||| |||||||||||||||||||    
T  49918213 tagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttga 49918267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 525
Target Start/End: Complemental strand, 834455 - 834382
Alignment:
Q  452 aaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  834455 aaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 834382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 10925088 - 10925176
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| |  |||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  10925088 agagcttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattatagttctcttgggttgggaaac 10925176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 13598862 - 13598826
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  13598862 cgttttcaggataaggttggtcgtaccttgggtcgta 13598826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 13604259 - 13604316
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    ||||||||||||||||||||||||||||| ||||||  || ||||||| |||| ||||||    
T  13604259 gttttcaggataaggttggtcgtaccttgggtcgta--cgtatcaatcgtgacacgattt 13604316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 29135789 - 29135825
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29135789 cgttttcaggataaggttggtcgtaccttgggtcgta 29135825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 37070229 - 37070193
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  37070229 cgttttcaggataaggttggtcgtaccttgggtcgta 37070193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 46064629 - 46064693
Alignment:
Q  299 cgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||  ||| ||| | | |||||||||||| ||||||||||||||| ||||||    
T  46064629 cgtgacacgatttttggcatgcttggcacattttcaggataaagttggtcgtaccttgggtcgta 46064693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 46064783 - 46064871
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||||||||| | |||||||||  |||||||||||  ||||||  | |||||||| ||||  |||||| ||||||||    
T  46064783 agagcttcaagagagaaaaacttgggaaatcaaagaaggtaactttattgttgagggtctttgattatggttctcttggggtggaaaac 46064871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 503
Target Start/End: Complemental strand, 8871364 - 8871297
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgatta 503  Q
    |||||||| |||||||| ||||||| || ||||||  ||||||||||||||||||  | |||||||||    
T  8871364 tagagcttcaagagagagaaactagggatatcaaagcaggtaactttagggttgatgacttttgatta 8871297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 525
Target Start/End: Original strand, 44455034 - 44455113
Alignment:
Q  446 agagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| ||||| |  |||||||| ||||||||||||||||||||  | ||||||||  |||| |||||||||| ||||    
T  44455034 agagagagaaacttggtaaatcaaaggaggtaactttagggttgagggtctttgattagagttttcttgggttgggaaac 44455113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 491
Target Start/End: Original strand, 3156739 - 3156785
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  3156739 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 3156785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 394
Target Start/End: Original strand, 15820048 - 15820111
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgacaac 394  Q
    |||| ||||||||||||||||||||||| ||||||  |||||||| |||| | |||||||| ||||    
T  15820048 tttttaggataaggttggtcgtaccttgggtcgta--cgcatcaaccatgtctcgattttggcaac 15820111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 29652273 - 29652239
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  29652273 ttttcaggataaggttggtcgtaccttgggtcgta 29652239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 491
Target Start/End: Complemental strand, 40122493 - 40122447
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    |||||||||||||| | ||||||||| |||||||||||| |||||||    
T  40122493 aagagagaaaaacttgggaaatcaaaggaggtaactttatggttgag 40122447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 49918054 - 49918124
Alignment:
Q  293 gaaaatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||| ||||||||||||||| |  || | | | |||||||||||||||||||||| ||||||| ||||||    
T  49918054 gaaaaacgtgacacgatttttaacttgctgggcacgttttcaggataaggttggtcataccttgggtcgta 49918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 525
Target Start/End: Complemental strand, 197216 - 197123
Alignment:
Q  432 gagttagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||| ||| ||| ||||||| |||||| |  |||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  197216 gagtgagaacttcaagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 197123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 3156606 - 3156635
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  3156606 cgttttcaggataaggttggtcgtaccttg 3156635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 16124295 - 16124324
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  16124295 cgttttcaggataaggttggtcgtaccttg 16124324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 21536206 - 21536264
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    |||||||||||| ||||||||||||||||| ||||||  |||| ||||| || ||||||||    
T  21536206 cgttttcaggatgaggttggtcgtaccttgggtcgta--cgcaccaatcgtgccccgattt 21536264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 3847416 - 3847336
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| |||||||||||||||| |||  | ||||||||  |||  |||||||||| ||||    
T  3847416 aagagaggaaaacttgggaaatcaaaggaggtaactttagggtcgagggtctttgattagagttctcttgggttgggaaac 3847336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 9183467 - 9183377
Alignment:
Q  299 cgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgac 391  Q
    |||||||||||||||||  || | | |  ||||||||||||||||||||||||||||| ||||||  |||||||||| |||| ||||||||||    
T  9183467 cgtgacacgatttttgacttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatcgtgacacgattttgac 9183377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 21272593 - 21272653
Alignment:
Q  296 aatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||| |||||||||||| ||||||| | |||||||||||||||||||||| |||||||    
T  21272593 aatcgtgtcacgatttttgacatgtttggcacgttttcaggataaggttggtcataccttg 21272653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 9183334 - 9183280
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  9183334 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 9183280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 16452756 - 16452709
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatg 378  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  16452756 ttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatcatg 16452709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 26954588 - 26954534
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| ||||||| |||||| | ||||||||| ||||||||||||||||||||    
T  26954588 agagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgag 26954534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 3039218 - 3039142
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttg 514  Q
    ||||||| |||||||||||||| | ||| ||||| ||||||||||||||||||||  | |||||||| ||||| ||||    
T  3039218 agagcttcaagagagaaaaacttgggaa-tcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 3039142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 5571899 - 5571965
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgacaact 395  Q
    |||||| ||| ||||||||||||||||||| ||||||  |||| ||||| |||| ||||||||||||||    
T  5571899 cgtttttaggttaaggttggtcgtaccttgggtcgta--cgcaccaatcgtgacacgattttgacaact 5571965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 24435579 - 24435636
Alignment:
Q  299 cgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||  |  |||||| | ||||||||||||||||||||||||||||||    
T  24435579 cgtgacacgattttcaacttgtttggcacgttttcaggataaggttggtcgtaccttg 24435636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 10076826 - 10076862
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  10076826 cgttttcaggataaggttggtcgtaccttgggtcgta 10076862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 18234545 - 18234509
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  18234545 cgttttcaggataaggttggtcgtaccttgggtcgta 18234509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 26661470 - 26661506
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  26661470 cgttttcaggataaggttggtcgtaccttgggtcgta 26661506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 26767441 - 26767477
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  26767441 cgttttcaggataaggttggtcgtaccttgggtcgta 26767477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 26954760 - 26954696
Alignment:
Q  299 cgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||| |||||||||||  ||| ||| | | |||||||||||||||||||||||||||| ||||||    
T  26954760 cgtgtcacgatttttggcatgcttgacacattttcaggataaggttggtcgtaccttgggtcgta 26954696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 31979979 - 31979943
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31979979 cgttttcaggataaggttggtcgtactttgagtcgta 31979943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 3809355 - 3809320
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3809355 gttttcaggataaggttggtcgtaccttgggtcgta 3809320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 5413875 - 5413831
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatc 375  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||    
T  5413875 ttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatc 5413831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 16452867 - 16452823
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatc 375  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||    
T  16452867 ttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatc 16452823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 5017133 - 5017167
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  5017133 ttttcaggataaggttggtcgtaccttgggtcgta 5017167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 5407335 - 5407280
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgatt 386  Q
    |||||| ||||||||||||||||||||| ||||||  |||||||||| |||| |||||    
T  5407335 ttttcaagataaggttggtcgtaccttgggtcgta--cgcatcaatcgtgacacgatt 5407280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 31086110 - 31086144
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  31086110 ttttcaggataaggttggtcgtaccttgggtcgta 31086144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 33160781 - 33160726
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgatt 386  Q
    |||||||||||||||||||||||| ||| ||||||  |||||||||| |||| |||||    
T  33160781 ttttcaggataaggttggtcgtacattgggtcgta--cgcatcaatcgtgacacgatt 33160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 565
Target Start/End: Original strand, 3039145 - 3039190
Alignment:
Q  520 gaaaaccctaatcaaataccctaaaccctaacattacctcctttga 565  Q
    |||||||||||||||| ||||| ||||||||  |||||||||||||    
T  3039145 gaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga 3039190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 5757115 - 5757152
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatg 365  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  5757115 gttttcaggataaggttggtcgtacctttggtcgtatg 5757152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 31404977 - 31404888
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtat-ttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| |||| |||||||||||| ||  | |||||||||  |||  |||||||||||||||    
T  31404977 agagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtcttttgattagagttctcttgggttggaaaac 31404888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 356
Target Start/End: Complemental strand, 22964159 - 22964131
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttg 356  Q
    |||||||||||||||||||||||||||||    
T  22964159 gttttcaggataaggttggtcgtaccttg 22964131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 356
Target Start/End: Original strand, 23824234 - 23824262
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttg 356  Q
    |||||||||||||||||||||||||||||    
T  23824234 gttttcaggataaggttggtcgtaccttg 23824262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 46147658 - 46147581
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttg 514  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||  | |||||||| ||||| ||||    
T  46147658 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttttcttg 46147581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 436 - 514
Target Start/End: Complemental strand, 36463706 - 36463628
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttg 514  Q
    |||||||| |||||||||||||| | ||||||| | |||||||||||||| |||||  | |||||||||||||| ||||    
T  36463706 tagagcttcaagagagaaaaacttgggaaatcataggaggtaactttaggattgagggtctttgattaaggttttcttg 36463628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 440 - 525
Target Start/End: Complemental strand, 9927757 - 9927672
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  9927757 gcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 9927672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 12739845 - 12739765
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  12739845 aagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 12739765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 12748051 - 12747971
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  12748051 aagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 12747971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 432 - 488
Target Start/End: Complemental strand, 37230044 - 37229988
Alignment:
Q  432 gagttagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggtt 488  Q
    |||| ||||||| |||||||| ||||| ||||||||||| |||||||||||||||||    
T  37230044 gagtaagagcttcaagagagacaaacttgagaaatcaaaggaggtaactttagggtt 37229988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 508
Target Start/End: Complemental strand, 45687496 - 45687428
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    |||| |||||||| ||||||| ||||||||| ||||||||||||||||||||  | |||||||| ||||    
T  45687496 gcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggtt 45687428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 41639051 - 41639122
Alignment:
Q  292 ggaaaatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||| ||||||||||||||  |  |||| | | |||||||||||||||||||||||||||||| ||||||    
T  41639051 ggaaaaacgtgacacgattttcaacttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgta 41639122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 52467657 - 52467570
Alignment:
Q  438 gagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||| |||||||| ||||||| | ||||||| ||||||| ||||||||||||  | |||||||| ||||  |||||||||| ||||    
T  52467657 gagcttcaagagagagaaactagggtaatcaaaggaggtaattttagggttgagggtctttgattagggttctcttgggttgggaaac 52467570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 25861669 - 25861732
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgacaa 393  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||| || | |||||| |||||    
T  25861669 gttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatcgtgtcacgatttggacaa 25861732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 525
Target Start/End: Complemental strand, 52082958 - 52082872
Alignment:
Q  439 agcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  52082958 agcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 52082872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 439 - 520
Target Start/End: Complemental strand, 52093965 - 52093884
Alignment:
Q  439 agcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    ||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  ||||||||||    
T  52093965 agcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgg 52093884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 490
Target Start/End: Complemental strand, 56178939 - 56178886
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| |||||||| ||||| | ||||||||| |||||||||||||||||||    
T  56178939 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttga 56178886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 5148139 - 5148103
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5148139 cgttttcaggataaggttggtcgtaccttgggtcgta 5148103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 5268835 - 5268871
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5268835 cgttttcaggataaggttggtcgtaccttgggtcgta 5268871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 5429544 - 5429632
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| || |||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  5429544 agagcttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 5429632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 8689132 - 8689168
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8689132 cgttttcaggataaggttggtcgtaccttgggtcgta 8689168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 26175939 - 26175851
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||| ||||||  | ||||||||| |||   ||||||||| ||||    
T  26175939 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagagttgagggtctttgattaaagttctgttgggttgggaaac 26175851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 36314865 - 36314901
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36314865 cgttttcaggataaggttggtcgtaccttgggtcgta 36314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 36329074 - 36329110
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36329074 cgttttcaggataaggttggtcgtaccttgggtcgta 36329110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 48142915 - 48142995
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  48142915 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 48142995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 491
Target Start/End: Complemental strand, 52095663 - 52095611
Alignment:
Q  439 agcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  52095663 agcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 52095611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 54200209 - 54200121
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||| ||||||||| |||||   ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  54200209 agagctgaaagagagagaaacttaggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 54200121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 24968818 - 24968885
Alignment:
Q  296 aatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||| |||   ||| ||| | |||||||||||||||||||||||||| ||| ||||||    
T  24968818 aatcgtgacacgatatttagcatgcttgacacgttttcaggataaggttggtcgtacattgggtcgta 24968885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 37740366 - 37740401
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37740366 gttttcaggataaggttggtcgtaccttgggtcgta 37740401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 3909810 - 3909871
Alignment:
Q  301 tgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||| |||||||  ||||||| | |||||| || |||||||||||||||||||||||||||    
T  3909810 tgacactatttttggcatgtttggcacgttttaag-ataaggttggtcgtaccttgagtcgta 3909871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 16622931 - 16622965
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  16622931 ttttcaggataaggttggtcgtaccttgggtcgta 16622965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 490
Target Start/End: Complemental strand, 21704128 - 21704078
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    |||| |||||||| ||||| ||||||||||| |||||||||||| ||||||    
T  21704128 gcttcaagagagagaaacttgagaaatcaaatgaggtaactttaaggttga 21704078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 523 - 565
Target Start/End: Original strand, 37229968 - 37230010
Alignment:
Q  523 aaccctaatcaaataccctaaaccctaacattacctcctttga 565  Q
    ||||||||||||| ||||||||||||||  |||||||||||||    
T  37229968 aaccctaatcaaagaccctaaaccctaaagttacctcctttga 37230010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 52095787 - 52095753
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  52095787 ttttcaggataaggttggtcgtaccttgggtcgta 52095753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 523 - 565
Target Start/End: Original strand, 52467587 - 52467629
Alignment:
Q  523 aaccctaatcaaataccctaaaccctaacattacctcctttga 565  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  52467587 aaccctaatcaaagaccctcaaccctaaaattacctcctttga 52467629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 5396327 - 5396389
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgaca 392  Q
    |||||||||||||||||| |||||||||| ||||||  |||| ||||| || | |||||||||||    
T  5396327 gttttcaggataaggttgatcgtaccttgggtcgta--cgcaccaatcgtgccacgattttgaca 5396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 6743050 - 6743079
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  6743050 cgttttcaggataaggttggtcgtaccttg 6743079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 24968984 - 24969029
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    |||||||||||||| | ||||||||| |||||||||||| ||||||    
T  24968984 aagagagaaaaacttgggaaatcaaaggaggtaactttaaggttga 24969029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 27417595 - 27417562
Alignment:
Q  330 tttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||| ||||||    
T  27417595 tttcaggataaggttggtcgtaccttgggtcgta 27417562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 565
Target Start/End: Original strand, 46147584 - 46147629
Alignment:
Q  520 gaaaaccctaatcaaataccctaaaccctaacattacctcctttga 565  Q
    |||||||||||||||| ||||| ||||||||  |||||||||||||    
T  46147584 gaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga 46147629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 3778010 - 3777974
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  3778010 cgttttcaagataaggttggtcgtaccttgggtcgta 3777974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 488
Target Start/End: Original strand, 3909983 - 3910023
Alignment:
Q  448 agagaaaaactagagaaatcaaacgaggtaactttagggtt 488  Q
    ||||||||||||| ||||||||| |||||||||| ||||||    
T  3909983 agagaaaaactagggaaatcaaaggaggtaacttaagggtt 3910023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 12745839 - 12745782
Alignment:
Q  333 caggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgaca 392  Q
    |||||||||||||||||||||||| |||||| ||||  ||||| || | |||||||||||    
T  12745839 caggataaggttggtcgtaccttgggtcgtacgcgc--caatcgtgtcacgattttgaca 12745782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 13009726 - 13009646
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||| ||  | ||||||||  |||  |||||||||| ||||    
T  13009726 aagagaggaaaacttgggaaatcaaatgaggtaactttagggttaagggtctttgattagagttctcttgggttgggaaac 13009646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 484
Target Start/End: Original strand, 31473798 - 31473850
Alignment:
Q  432 gagttagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttag 484  Q
    |||| ||||||| |||||| ||||| | ||||||||||| |||||||||||||    
T  31473798 gagtaagagcttcaagagataaaaatttgagaaatcaaaggaggtaactttag 31473850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 37740499 - 37740579
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||| ||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  37740499 aagagagagaaacttgggaaatcaaaggaggtaagtttagggttgagggtctttgattagagttctcttgggttgggaaac 37740579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 50674493 - 50674457
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  50674493 cgttttcaggataaggttggttgtaccttgggtcgta 50674457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 54882561 - 54882597
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  54882561 cgttttcaggataaggttgatcgtaccttgggtcgta 54882597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 42498059 - 42498147
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  42498059 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 42498147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 300 - 366
Target Start/End: Complemental strand, 3051610 - 3051544
Alignment:
Q  300 gtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    |||||||||||||||  ||||||| | |||||||| ||||||||||||||||| ||| |||||||||    
T  3051610 gtgacacgatttttggcatgtttgacacgttttcaagataaggttggtcgtacattgggtcgtatgc 3051544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 296 - 366
Target Start/End: Original strand, 10014867 - 10014937
Alignment:
Q  296 aatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    |||| ||||||||||||||  ||| ||| | ||||| |||||||||||||||||||||||| |||||||||    
T  10014867 aatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgc 10014937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 3303965 - 3303885
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||||||||| | ||||||||| |||||||||||| |||||||  | |||||||| ||||  |||||||||| ||||    
T  3303965 aagagagaaaaacttgggaaatcaaaggaggtaactttacggttgagggtctttgattagggttctcttgggttgggaaac 3303885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 15212651 - 15212739
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  15212651 agagcttgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 15212739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 30143207 - 30143295
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  30143207 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 30143295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 437 - 508
Target Start/End: Original strand, 5689136 - 5689207
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    ||||||| |||||||| ||||||| ||||||||| ||| ||||||||||||||||  | |||||||| ||||    
T  5689136 agagcttcaagagagagaaactagggaaatcaaaggagataactttagggttgagggtctttgattagggtt 5689207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 4283068 - 4283106
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  4283068 gttttcaggataaggttggtcgtaccttgggtcgtatgc 4283106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 4696263 - 4696326
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattttgaca 392  Q
    |||||||||||||||||||||||||||||| ||||||  |||| ||| | |||| |||||||||||    
T  4696263 cgttttcaggataaggttggtcgtaccttgggtcgta--cgcaccaaacgtgacacgattttgaca 4696326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 491
Target Start/End: Complemental strand, 29796618 - 29796572
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  29796618 aagagagagaaacttgagaaatcaaaggaggtaactttagggttgag 29796572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 525
Target Start/End: Original strand, 4162380 - 4162453
Alignment:
Q  452 aaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||  |||||| ||| ||||||||||||||||||||  | |||||||| ||||  |||||||||||||||    
T  4162380 aaaaacttaagaaattaaaagaggtaactttagggttgagggtctttgattagggttctcttgggttggaaaac 4162453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 4731531 - 4731611
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| || |||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  4731531 aagagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 4731611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 489
Target Start/End: Original strand, 10929666 - 10929718
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttg 489  Q
    ||||||| ||||||| |||||| | ||||||||| ||||||||||||||||||    
T  10929666 agagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttg 10929718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 12702941 - 12702853
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||| ||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  12702941 agagcttgaagagagagaaacttgggaaatcaaaggaggtaaatttagggttgagggtctttgattagagttctcttgggttgggaaac 12702853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 43036296 - 43036376
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  43036296 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 43036376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 525
Target Start/End: Original strand, 4733683 - 4733762
Alignment:
Q  446 agagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  4733683 agagagagaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 4733762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 15212526 - 15212561
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  15212526 gttttcaggataaggttggtcgtaccttgggtcgta 15212561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 34254755 - 34254711
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatc 375  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||    
T  34254755 ttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatc 34254711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 40320940 - 40321003
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    |||||||| ||||||| ||||||||| ||||||||||| ||||||||  | |||||||| ||||    
T  40320940 aagagagagaaactagggaaatcaaaggaggtaactttcgggttgagggtctttgattagggtt 40321003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 42435637 - 42435602
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  42435637 gttttcaggataaggttggtcgtaccttgggtcgta 42435602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 1292766 - 1292712
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| ||||||| |||||| |  |||||||| ||||||||||||||||||||    
T  1292766 agagcttcaagagaggaaaacttggaaaatcaaatgaggtaactttagggttgag 1292712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 490
Target Start/End: Original strand, 30291456 - 30291510
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    |||||||| |||| ||| |||||||  |||||||| |||||||||||||||||||    
T  30291456 tagagcttcaagaaagagaaactaggaaaatcaaaggaggtaactttagggttga 30291510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 491
Target Start/End: Complemental strand, 41365142 - 41365096
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||    
T  41365142 aagagaggaaaacttgtgaaatcaaatgaggtaactttagggttgag 41365096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 490
Target Start/End: Complemental strand, 1872226 - 1872173
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| |||||||| ||||| |||||||||||  | ||||||||||||||||    
T  1872226 agagcttcaagagagagaaacttgagaaatcaaagaaagtaactttagggttga 1872173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 525
Target Start/End: Original strand, 18141684 - 18141773
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| |||||||| |||||||  ||||| || ||||||| ||||||||||||  | |||||||| ||||  ||| |||||| ||||    
T  18141684 tagagcttcaagagagagaaactaggaaaatcgaaggaggtaattttagggttgagggtctttgattagggttctcttaggttgggaaac 18141773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 6598845 - 6598925
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||| ||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  6598845 aagagaggaaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggttgggaaac 6598925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 6674298 - 6674378
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||| ||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  6674298 aagagaggaaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggttgggaaac 6674378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 33352023 - 33352103
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | |||||||||  |||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  33352023 aagagagagaaacttgggaaatcaaagaaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 33352103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 34254631 - 34254547
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgga 521  Q
    ||||||| |||||||| ||||| | ||||||||| |||| |||||||||||| ||  | ||||||||  |||  |||||||||||    
T  34254631 agagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagttctcttgggttgga 34254547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 43036127 - 43036191
Alignment:
Q  292 ggaaaatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttg 356  Q
    |||||| |||||||||||||| ||  |||| | |  |||||||||||||||||| ||||||||||    
T  43036127 ggaaaaacgtgacacgattttcgacttgttgggcaagttttcaggataaggttgatcgtaccttg 43036191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 436 - 508
Target Start/End: Original strand, 36773413 - 36773485
Alignment:
Q  436 tagagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    |||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||  | |||||||| ||||    
T  36773413 tagagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggtt 36773485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 11067160 - 11067228
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    |||| |||||||| ||||||| ||||||||| |||||||||||| |||||| | | |||||||||||||    
T  11067160 gcttcaagagagagaaactagggaaatcaaaggaggtaactttatggttgattgtctttgattaaggtt 11067228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 36988378 - 36988290
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  36988378 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 36988290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 2334719 - 2334632
Alignment:
Q  438 gagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  2334719 gagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctcttgggttgggaaac 2334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 11151886 - 11151806
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  11151886 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 11151806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 11690374 - 11690454
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  11690374 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattatagttctcttgggttgggaaac 11690454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 17865639 - 17865603
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  17865639 cgttttcaggataaggttggtcgtaccttgggtcgta 17865603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 20522684 - 20522648
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  20522684 cgttttcaggataaggttggtcgtaccttgggtcgta 20522648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 28258814 - 28258859
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatc 375  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  28258814 gttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatc 28258859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 34389312 - 34389276
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  34389312 cgttttcaggataaggttggtcgtaccttgggtcgta 34389276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 36318305 - 36318229
Alignment:
Q  444 aaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttgg 520  Q
    ||||||||| ||||| | ||||||||| ||||||||||||||||||| | | ||||||||  |||  ||||||||||    
T  36318305 aaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaatgtctttgattagagttatcttgggttgg 36318229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 36318438 - 36318402
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||||| |||||    
T  36318438 cgttttcaggataaggttggtcgtaccttgaatcgta 36318402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 525
Target Start/End: Original strand, 38312105 - 38312193
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||| | | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  38312105 agagcttgaagagagagaaatttgggaaatcaaaggaggtaactttagggttgaggttctttgattagagttctcttgggttgggaaac 38312193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 39284758 - 39284838
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  39284758 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 39284838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 40015399 - 40015339
Alignment:
Q  296 aatcgtgacacgatttttgatatgtttgccgcgttttcaggataaggttggtcgtaccttg 356  Q
    |||||||||||||||||||  ||| ||| | |||||||| ||||| |||||||||||||||    
T  40015399 aatcgtgacacgatttttggcatgattgacacgttttcatgataatgttggtcgtaccttg 40015339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 42362225 - 42362305
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  42362225 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 42362305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 2334844 - 2334788
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    |||||||||||||||||||||||||||| ||||||  | |||||||| |||| ||||||    
T  2334844 ttttcaggataaggttggtcgtaccttgggtcgta--cacatcaatcgtgacacgattt 2334788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 2837272 - 2837237
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2837272 gttttcaggataaggttggtcgtaccttgggtcgta 2837237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 5723681 - 5723637
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatc 375  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||    
T  5723681 ttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatc 5723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 45099496 - 45099540
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatc 375  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||    
T  45099496 ttttcaggataaggttggtcgtaccttgaatcgta--cgcatcaatc 45099540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 494
Target Start/End: Complemental strand, 3278314 - 3278280
Alignment:
Q  460 gagaaatcaaacgaggtaactttagggttgagtat 494  Q
    ||||||||||| |||||||||||||||||||||||    
T  3278314 gagaaatcaaatgaggtaactttagggttgagtat 3278280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 6595309 - 6595255
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||||| |||||   ||||||||| ||||||||||||||||||||    
T  6595309 agagcttgaagagagagaaacttaggaaatcaaatgaggtaactttagggttgag 6595255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 14698646 - 14698680
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  14698646 ttttcaggataaggttggtcgtaccttgggtcgta 14698680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 523 - 565
Target Start/End: Original strand, 33162682 - 33162724
Alignment:
Q  523 aaccctaatcaaataccctaaaccctaacattacctcctttga 565  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  33162682 aaccctaatcaaagaccctcaaccctaaaattacctcctttga 33162724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 36988502 - 36988468
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||| ||||||    
T  36988502 ttttcaggataaggttggtcgtaccttgggtcgta 36988468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Complemental strand, 39483338 - 39483309
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  39483338 cgttttcaggataaggttggtcgtaccttg 39483309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 10706888 - 10706924
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  10706888 cgttttaaggataaggttggtcgtaccttgggtcgta 10706924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 14202702 - 14202622
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| |||||||||||| |||||||  | ||||||||  |||  |||||||||| ||||    
T  14202702 aagagaggaaaacttgggaaatcaaatgaggtaactttatggttgagggtctttgattagagttctcttgggttgggaaac 14202622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 21630407 - 21630371
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  21630407 cgttttcaggataaggttggtcgtactttgggtcgta 21630371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 23078107 - 23078143
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  23078107 cgttttcaggataaggttggtcgtatcttgggtcgta 23078143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 33162745 - 33162665
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||| ||||||||||||  | |||||||| ||||  |||| ||||| ||||    
T  33162745 aagagagagaaacttgggaaatcaaaggaggtaattttagggttgagggtctttgattagggttctcttgagttgggaaac 33162665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 438 - 508
Target Start/End: Original strand, 114456 - 114526
Alignment:
Q  438 gagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtt 508  Q
    |||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||  | |||||||| ||||    
T  114456 gagcttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagggtt 114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 503
Target Start/End: Original strand, 16451946 - 16452012
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgatta 503  Q
    ||||||| ||||||| |||||| | ||||||||| |||||||||||||||||||| || ||||||||    
T  16451946 agagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggatctttgatta 16452012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 13488076 - 13488156
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||||||||    
T  13488076 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttggaaaac 13488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 28750958 - 28750870
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  28750958 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 28750870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 366
Target Start/End: Original strand, 12083813 - 12083852
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  12083813 cgttttcaggataaggttggtcgtaccttgggtcgtatgc 12083852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 13239492 - 13239548
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgatt 386  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||| |||| |||||    
T  13239492 gttttcaggataaggttggtcgtaccttgggtcgta--cgcatcaatcgtgacacgatt 13239548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 535643 - 535681
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  535643 gttttcaggataaggttggtcgtaccttgggtcgtatgc 535681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 39468852 - 39468798
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  39468852 agagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 39468798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 490
Target Start/End: Original strand, 42926758 - 42926811
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| |||||||||||||| | ||||||||| |||||||||||||| ||||    
T  42926758 agagcttcaagagagaaaaacttgggaaatcaaatgaggtaactttaggattga 42926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 3075953 - 3075873
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| ||||||   ||||||||| ||||||||||||||||||||  | ||||||||| |||  |||||||||| ||||    
T  3075953 aagagagtaaaactttggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaac 3075873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 499
Target Start/End: Original strand, 5007419 - 5007478
Alignment:
Q  440 gcttaaagagagaaaaact-agagaaatcaaacgaggtaactttagggttgagtatttttg 499  Q
    |||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||    
T  5007419 gctttaagagagaaaaacttaga-aaatcaaaggaggtaactttagggttgagtatctttg 5007478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 5887711 - 5887631
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  5887711 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctcttgggttgggaaac 5887631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 14520691 - 14520655
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  14520691 cgttttcaggataaggttggtcgtaccttgggtcgta 14520655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Original strand, 31182846 - 31182926
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttgagtatttttgattaaggtttgcttgggttggaaaac 525  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||  | ||||||||  |||  |||||||||| ||||    
T  31182846 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac 31182926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 9352971 - 9353006
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  9352971 gttttcaggataaggttggtcgtaccttgggtcgta 9353006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 13487943 - 13487978
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  13487943 gttttcaggataaggttggtcgtaccttgggtcgta 13487978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 27015054 - 27015089
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27015054 gttttcaggataaggttggtcgtaccttgggtcgta 27015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 488
Target Start/End: Original strand, 32636689 - 32636740
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggtt 488  Q
    |||||||  ||||||| ||||| ||||||||||| |||||||||||||||||    
T  32636689 agagcttggagagagagaaacttgagaaatcaaaggaggtaactttagggtt 32636740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 36931986 - 36932021
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  36931986 gttttcaggataaggttggtcgtaccttgggtcgta 36932021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 366
Target Start/End: Complemental strand, 39468961 - 39468922
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgtatgc 366  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  39468961 cgtttttaggataaggttggtcgtaccttgggtcgtatgc 39468922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 42426663 - 42426628
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  42426663 gttttcaggataaggttggtcgtaccttgggtcgta 42426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 490
Target Start/End: Complemental strand, 9049655 - 9049605
Alignment:
Q  440 gcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    |||| |||||||| ||||| ||||||||||| ||| |||||||||||||||    
T  9049655 gcttcaagagagagaaacttgagaaatcaaaggagataactttagggttga 9049605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 36074471 - 36074424
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatg 378  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||||||    
T  36074471 ttttcaggataaggttggtcgtaccttggatcgta--cgcatcaatcatg 36074424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 37438887 - 37438942
Alignment:
Q  329 ttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgatt 386  Q
    |||||||||||||||| ||||||||||| ||||||  |||||||||| |||| |||||    
T  37438887 ttttcaggataaggtttgtcgtaccttgggtcgta--cgcatcaatcgtgacacgatt 37438942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 37439013 - 37439067
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| |||||||| ||||| |  |||||||| ||||||||||||||||||||    
T  37439013 agagcttgaagagagagaaacttggaaaatcaaatgaggtaactttagggttgag 37439067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 42426538 - 42426484
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttgag 491  Q
    ||||||| || ||||| ||||| | ||||||||| ||||||||||||||||||||    
T  42426538 agagcttgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttgag 42426484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 16649917 - 16649872
Alignment:
Q  445 aagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| |||||| | ||||||||| |||||||||||||||||||    
T  16649917 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttga 16649872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Complemental strand, 16651051 - 16651022
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttg 356  Q
    ||||||||||||||||||||||||||||||    
T  16651051 cgttttcaggataaggttggtcgtaccttg 16651022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 490
Target Start/End: Complemental strand, 42428733 - 42428680
Alignment:
Q  437 agagcttaaagagagaaaaactagagaaatcaaacgaggtaactttagggttga 490  Q
    ||||||| |||||||| ||||| | ||||||||| ||| |||||||||||||||    
T  42428733 agagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttga 42428680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 19806145 - 19806181
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  19806145 cgtttttaggataaggttggtcgtaccttgggtcgta 19806181  T

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Target: scaffold0087 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 36468 - 36526
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    |||||||||||||||||||||||||||||| ||||||  |||| |||||||| | ||||||    
T  36468 cgttttcaggataaggttggtcgtaccttgggtcgta--cgcaccaatcatggcacgattt 36526  T

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Target: scaffold0087; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 43598 - 43635
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatg 365  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  43598 gttttcaggataaggttggtcgtaccttgggtcgtatg 43635  T

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Target: scaffold0140 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 8054 - 8111
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    ||||||||||||||||||||||||||||| ||||||  || ||||||| |||| ||||||    
T  8054 gttttcaggataaggttggtcgtaccttgggtcgta--cgtatcaatcgtgacacgattt 8111  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 6147 - 6111
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    |||||||||||||||||||||||||||||| ||||||    
T  6147 cgttttcaggataaggttggtcgtaccttgggtcgta 6111  T

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Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 132916 - 132973
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcatgacccgattt 387  Q
    ||||||||||||||||||||||||||||| ||||||  || ||||||| |||| ||||||    
T  132916 gttttcaggataaggttggtcgtaccttgggtcgta--cgtatcaatcgtgacacgattt 132973  T

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Target: scaffold0006; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 2954 - 2919
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2954 gttttcaggataaggttggtcgtaccttgggtcgta 2919  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 45659 - 45624
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45659 gttttcaggataaggttggtcgtaccttgggtcgta 45624  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 80929 - 80894
Alignment:
Q  328 gttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||||||||||| ||||||    
T  80929 gttttcaggataaggttggtcgtaccttgggtcgta 80894  T

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Target: scaffold0466 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 6848 - 6884
Alignment:
Q  327 cgttttcaggataaggttggtcgtaccttgagtcgta 363  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  6848 cgttttcaggataaggttggttgtaccttgggtcgta 6884  T

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