View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17198_low_25 (Length: 378)
Name: NF17198_low_25
Description: NF17198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17198_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 21481737 - 21482014
Alignment:
| Q |
10 |
gaagaatattaaaaagaatgtaaaatatgaaaatcggtttgaaccaaccacggtttaacccgaggattcacaattcaattagttgaatgggatgagttta |
109 |
Q |
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| T |
21481737 |
gaagaatattaaaaagaatgtaaaatatgaaaatcggtttgaaccaaccacggtttaacccgaggattcacaattcaatgagttgaacgggatgagttta |
21481836 |
T |
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| Q |
110 |
gtctggttttttaaaactttggtttgatctcgattcaattacgccgggaactaggaaatccaaatccatgaaaattaagtaaaagaaaacattataagag |
209 |
Q |
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| T |
21481837 |
gtctggttttttaaaactttggtttgatctcgattcaattacgccgggaactaggaaatccaaatccatgaacattaagtaaaagaaaacattataagag |
21481936 |
T |
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| Q |
210 |
aaggctcttacaaatttgccacacttcacatcagaatatatcactatgaaatctccttcttggagaccattagctttc |
287 |
Q |
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| T |
21481937 |
aaggctcttacaaatttgccacacttcacatcagaatatatcactatgaaatctccttcttggagtccattagctttc |
21482014 |
T |
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