View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17198_low_38 (Length: 278)
Name: NF17198_low_38
Description: NF17198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17198_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 12681012 - 12680740
Alignment:
| Q |
1 |
ccattgagaatctttgcagggttaaatttgttcctttctctccctaaatgggtctctagtagtacagaattaatgccggaacagctcaagtttggccaca |
100 |
Q |
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| T |
12681012 |
ccattgagaatctttgcagggttaaatttgttcctttctctccctaaatgggtctctagtagtacagaattaatgccggaacagctcaagtttggccaca |
12680913 |
T |
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| Q |
101 |
tgcaaaataggttgggaacatgtacggtttggtatacacctttcatgttaccctttatccttatgtgttgaattattgattacctgatttggttgtgcac |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12680912 |
tgcaaaatagcttgggaacatgtacggtttggtatacacctttcatgttaccctttatccttatgtgttgaattattgattacctgatttggttgtgcac |
12680813 |
T |
|
| Q |
201 |
agttaatcatctagagtcacttcttggaataattcgaaagggtaccctgcatcttaaaccttttcttctcact |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
12680812 |
agttaatcatctagagtcacttcttggaataattcgaaagggtaccctgcatcttaaaccttttcttttcact |
12680740 |
T |
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