View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17199_low_17 (Length: 376)

Name: NF17199_low_17
Description: NF17199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17199_low_17
NF17199_low_17
[»] chr8 (10 HSPs)
chr8 (16-363)||(3388893-3389240)
chr8 (16-326)||(31177860-31178170)
chr8 (113-354)||(3319929-3320169)
chr8 (58-203)||(3366320-3366465)
chr8 (173-326)||(31178529-31178682)
chr8 (173-326)||(31179041-31179194)
chr8 (165-288)||(3405480-3405593)
chr8 (16-112)||(3319763-3319859)
chr8 (49-111)||(3319844-3319906)
chr8 (167-203)||(3430518-3430554)
[»] chr5 (6 HSPs)
chr5 (32-275)||(15805257-15805493)
chr5 (167-225)||(12597423-12597481)
chr5 (43-133)||(30419930-30420020)
chr5 (16-90)||(12597296-12597370)
chr5 (59-112)||(15805236-15805289)
chr5 (16-100)||(15805145-15805229)
[»] chr3 (1 HSPs)
chr3 (66-292)||(6903432-6903657)
[»] chr2 (2 HSPs)
chr2 (163-255)||(14765581-14765672)
chr2 (259-311)||(14765395-14765447)
[»] scaffold0468 (1 HSPs)
scaffold0468 (170-291)||(2845-2965)
[»] chr7 (4 HSPs)
chr7 (156-257)||(13938456-13938556)
chr7 (156-257)||(39287484-39287584)
chr7 (292-341)||(13938580-13938629)
chr7 (167-211)||(8369937-8369981)


Alignment Details
Target: chr8 (Bit Score: 344; Significance: 0; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 16 - 363
Target Start/End: Complemental strand, 3389240 - 3388893
Alignment:
Q  16 catgaagtggaattgaaaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3389240 catgaagtggaattgaaaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttg 3389141  T
Q  116 ttgtcaagaatgaaccattaccgaagacaagtagaaaaaactttacgagacttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatct 215  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3389140 ttgtcaagaatgaaccattactgaagacaagtagaaaaaactttacgagacttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatct 3389041  T
Q  216 caacaatttttgattgagcacgcctattgtcctaatatggaactcccttgtatgtgttttgtaatatttttctgggagggaggattgacaatgcttgggc 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3389040 caacaatttttgattgagcacgcctattgtcctaatatggaactcccttgtatgtgttttgtaatatttttctgggagggaggattgacaatgcttgggc 3388941  T
Q  316 attaatgtgatcgattgcaggatcctattttcttctctcatgtggtct 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3388940 attaatgtgatcgattgcaggatcctattttcttctctcatgtggtct 3388893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 16 - 326
Target Start/End: Original strand, 31177860 - 31178170
Alignment:
Q  16 catgaagtggaattgaaaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttg 115  Q
    |||||||||||| || |||| ||||| ||||| |||| ||| ||||||||||||||||| || || ||||||||||||||||||| |||||||| | |||    
T  31177860 catgaagtggaaatgcaaccatcacctaatgtgaaaacggagccatcagctgaagaggacgtgcagccatcacttgatgtgaaaacggaaccattacttg 31177959  T
Q  116 ttgtcaagaatgaaccattaccgaagacaagtagaaaaaactttacgagacttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatct 215  Q
    ||||||||||||||||| |||||||||||| |||||||| ||| || ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  31177960 ttgtcaagaatgaaccaataccgaagacaaatagaaaaatcttcacaagacttgcaaagagactgggagaatgtttatgcttgatccagaattgagatct 31178059  T
Q  216 caacaatttttgattgagcacgcctattgtcctaatatggaactcccttgtatgtgttttgtaatatttttctgggagggaggattgacaatgcttgggc 315  Q
       ||| ||||||||| |||| ||  ||||||||| |||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  31178060 ttgcaaattttgattgggcacaccggttgtcctaacatggaatttccttgtatgtgttttgtaatatttttcagggagggaggattgacaatgcttgggt 31178159  T
Q  316 attaatgtgat 326  Q
    |||||||||||    
T  31178160 attaatgtgat 31178170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 113 - 354
Target Start/End: Original strand, 3319929 - 3320169
Alignment:
Q  113 ttgttgtcaagaatgaaccattaccgaagacaagtagaaaaaactttacgagacttgcaaagagagtgggagaatgtttatgcttgaaccataattgaga 212  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  3319929 ttgttgtcaaaaatgaaccattaccgaagacaagtagaaaaatctttacaagactggcaaagagagtgggaaaatgtttatgcttgaaccaaaattgaga 3320028  T
Q  213 tctcaacaatttttgattgagcacgcctattgtcctaatatggaactcccttgtatgtgttttgtaatatttttctgggagggaggattgacaatgcttg 312  Q
    ||||| ||||||||| |||| || |||| ||||| ||| ||| || |||||  | ||||||| |||||| ||||| ||||||||||||||||||||||||    
T  3320029 tctcagcaatttttgtttgaacatgcctgttgtcataacatgaaattccct--tctgtgtttagtaataattttcagggagggaggattgacaatgcttg 3320126  T
Q  313 ggcattaatgtgatcgattgcaggatcct-attttcttctctc 354  Q
    || ||||||||||| ||||| |||||||| |||||||||||||    
T  3320127 ggaattaatgtgattgattgtaggatcctgattttcttctctc 3320169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 58 - 203
Target Start/End: Original strand, 3366320 - 3366465
Alignment:
Q  58 ccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttgttgtcaagaatgaaccattaccgaagacaagtagaaaaaact 157  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||||| ||    
T  3366320 ccatcagctgaagaggaagtacaaccatcacccaatgtgaaaatggaaccatcacttgttgtcaagaatgaaccattaccaaacacaaatagaaaaatct 3366419  T
Q  158 ttacgagacttgcaaagagagtgggagaatgtttatgcttgaacca 203  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||    
T  3366420 ttacaagacttgcaaagagagtgggagaatgtttatgcatgaacca 3366465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 173 - 326
Target Start/End: Original strand, 31178529 - 31178682
Alignment:
Q  173 agagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatggaactcccttgtatgtgt 272  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||   ||| ||||||||| |||| ||  ||||||||| |||||| | ||||||||||||    
T  31178529 agagactgggagaatgtttatgcttgatccagaattgagatctttgcaaattttgattgggcacaccggttgtcctaacatggaatttccttgtatgtgt 31178628  T
Q  273 tttgtaatatttttctgggagggaggattgacaatgcttgggcattaatgtgat 326  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  31178629 tttgtaatatttttcagggagggaggattgacaatgcttgggtattaatgtgat 31178682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 173 - 326
Target Start/End: Original strand, 31179041 - 31179194
Alignment:
Q  173 agagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatggaactcccttgtatgtgt 272  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||   ||| ||||||||| |||| ||  ||||||||| |||||| | ||||||||||||    
T  31179041 agagactgggagaatgtttatgcttgatccagaattgagatctttgcaaattttgattgggcacaccggttgtcctaacatggaatttccttgtatgtgt 31179140  T
Q  273 tttgtaatatttttctgggagggaggattgacaatgcttgggcattaatgtgat 326  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  31179141 tttgtaatatttttcagggagggaggattgacaatgcttgggtattaatgtgat 31179194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 288
Target Start/End: Complemental strand, 3405593 - 3405480
Alignment:
Q  165 acttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatggaactccctt 264  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||         ||| | |||||||| ||||||||||| || | ||||||    
T  3405593 acttgcaaagagagtgggaggatgtttatgcttgaaccagaattgagatctca---------gatagggcacgcct-ttgtcctaatacgggattccctt 3405504  T
Q  265 gtatgtgttttgtaatatttttct 288  Q
    ||||||||||| ||||||||||||    
T  3405503 gtatgtgttttctaatatttttct 3405480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 3319763 - 3319859
Alignment:
Q  16 catgaagtggaattgaaaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcag 112  Q
    ||||||||||||||  |||| ||||||||||||||||  ||  |||||||||||| |||| |||||||||||||  || |||||| ||| |||||||    
T  3319763 catgaagtggaattccaaccatcacccaatgtaaaaaccgagacatcagctgaagtggaaatacaaccatcactgaatttgaaaacggagccatcag 3319859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 3319844 - 3319906
Alignment:
Q  49 aaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatca 111  Q
    |||| ||| ||||||||||||||||||||||||  ||||| | ||||||||||||| ||||||    
T  3319844 aaaacggagccatcagctgaagaggaagtacaattatcacctaatgtgaaaatggagccatca 3319906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 3430518 - 3430554
Alignment:
Q  167 ttgcaaagagagtgggagaatgtttatgcttgaacca 203  Q
    ||||||||||||||||||||||||||||| |||||||    
T  3430518 ttgcaaagagagtgggagaatgtttatgcatgaacca 3430554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 32 - 275
Target Start/End: Original strand, 15805257 - 15805493
Alignment:
Q  32 aaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttgttgtcaagaatgaacc 131  Q
    |||| ||||| ||||| ||||| || ||||||||| ||||||||| |||||||||||  ||||||||||||||||||||| ||||   ||||||||||||    
T  15805257 aaccatcacctaatgtgaaaatagagccatcagctaaagaggaagcacaaccatcacccgatgtgaaaatggaaccatcacttgt---caagaatgaacc 15805353  T
Q  132 attaccgaagacaagtagaaaaaactttacgagacttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattg 231  Q
    |||||||||  ||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||     ||||| |||||||||    
T  15805354 attaccgaacgcaaatagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaaccagaaatgag----taacaacttttgattg 15805449  T
Q  232 agcacgcctattgtcctaatatggaactcccttgtatgtgtttt 275  Q
     ||| |||||||||||| |||||||| |||| ||||||||||||    
T  15805450 ggcatgcctattgtcctgatatggaattcccatgtatgtgtttt 15805493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 12597423 - 12597481
Alignment:
Q  167 ttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttt 225  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||    
T  12597423 ttgcaaagagagtgggagaatgtttgtgcttgaaccaaaattgagatatccacaatttt 12597481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 30419930 - 30420020
Alignment:
Q  43 aatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttgttgtcaagaatgaaccat 133  Q
    ||||| ||||| ||||||||| ||||||||||||||||| |||| |||||||||||||  ||  ||||| || || || ||||||||||||    
T  30419930 aatgtgaaaatagatccatcacctgaagaggaagtacaatcatcccttgatgtgaaaaatgaggcatcacttattatccagaatgaaccat 30420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 12597296 - 12597370
Alignment:
Q  16 catgaagtggaattgaaaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcactt 90  Q
    |||||||||||  || |||| ||||| ||||  |||| ||| |||||||||||||||||||||| ||||||||||    
T  12597296 catgaagtggaggtgcaaccatcaccgaatgggaaaacggagccatcagctgaagaggaagtacgaccatcactt 12597370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 15805236 - 15805289
Alignment:
Q  59 catcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcag 112  Q
    |||||||||||||||| ||||||||||||| | |||||||||| || |||||||    
T  15805236 catcagctgaagaggatgtacaaccatcacctaatgtgaaaatagagccatcag 15805289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 15805145 - 15805229
Alignment:
Q  16 catgaagtggaattgaaaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaa 100  Q
    |||||||||||| || || | ||||  | ||| ||||||||  |||| || |||||| || ||||||||||||||||||||||||    
T  15805145 catgaagtggaagtgcaatcatcacttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcacttgatgtgaaaa 15805229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 66 - 292
Target Start/End: Complemental strand, 6903657 - 6903432
Alignment:
Q  66 tgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttgttgtcaagaatgaaccattaccgaagacaagtagaaaaaactttacgaga 165  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||  | |  |||| ||||  |||||||| |||| || || |||||  |||   |||    
T  6903657 tgaagatgaagtgcaaccatcacttgatgtgaagatggaaccatcacctatcatcaacaatgggccattacctaagagaaatacaaaaatatttgtaaga 6903558  T
Q  166 cttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatggaactcccttg 265  Q
     || |||||| | |||||||||||||||||||||| |  ||| |||||||||| ||||||| |||| |||| ||| |||||| ||| | ||| | |||||    
T  6903557 ttttcaaagaaattgggagaatgtttatgcttgaatcggaatagagatctcaataatttttaattgtgcactcct-ttgtccaaattttgaatttccttg 6903459  T
Q  266 tatgtgttttgtaatatttttctggga 292  Q
    ||| ||||||||||||||||| |||||    
T  6903458 tatatgttttgtaatatttttgtggga 6903432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 14765672 - 14765581
Alignment:
Q  163 agacttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatgg 255  Q
    ||||| ||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||| |||| |||  ||||||||||||||    
T  14765672 agactcgcaaagagagtaggaaaatgtttatgcttgaaccaaaatcgagatctcaacaatttttgattaagcaggcc-gttgtcctaatatgg 14765581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 14765447 - 14765395
Alignment:
Q  259 tcccttgtatgtgttttgtaatatttttctgggagggaggattgacaatgctt 311  Q
    |||||||||||  ||||||||||||||||||| ||||||||  ||||||||||    
T  14765447 tcccttgtatggtttttgtaatatttttctggaagggaggacggacaatgctt 14765395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 2965 - 2845
Alignment:
Q  170 caaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatggaactcccttgtatg 269  Q
    |||||| |||||||||||||||||||||||| || ||| ||| |||| ||||||||| |||| |||  ||| ||||||||||   | | ||| |||||||    
T  2965 caaagaaagtgggagaatgtttatgcttgaatcagaatagaggtctcgacaatttttaattgcgcatacct-ttgtcctaattaaggattcctttgtatg 2867  T
Q  270 tgttttgtaatatttttctggg 291  Q
    ||| ||| ||||||||||||||    
T  2866 tgtcttgcaatatttttctggg 2845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 13938456 - 13938556
Alignment:
Q  156 ctttacgagacttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatgg 255  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||| | |||| ||| ||||  |||||||||||| |||| |||| |||| | ||||||    
T  13938456 ctttacaagacttgcaaagagagttggaaaatgtttatgcttgaacaaaaattaaga-ctcataaatttttgattgggcacacctaatgtcatgatatgg 13938554  T
Q  256 aa 257  Q
    ||    
T  13938555 aa 13938556  T

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Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 39287484 - 39287584
Alignment:
Q  156 ctttacgagacttgcaaagagagtgggagaatgtttatgcttgaaccataattgagatctcaacaatttttgattgagcacgcctattgtcctaatatgg 255  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||| | |||| ||| ||||  |||||||||||| |||| |||| |||| | ||||||    
T  39287484 ctttacaagacttgcaaagagagttggaaaatgtttatgcttgaacaaaaattaaga-ctcataaatttttgattgggcacacctaatgtcatgatatgg 39287582  T
Q  256 aa 257  Q
    ||    
T  39287583 aa 39287584  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 13938580 - 13938629
Alignment:
Q  292 agggaggattgacaatgcttgggcattaatgtgatcgattgcaggatcct 341  Q
    |||||||||  ||||||| ||||||||||| |||| ||||||||||||||    
T  13938580 agggaggatgaacaatgcctgggcattaatttgattgattgcaggatcct 13938629  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 8369981 - 8369937
Alignment:
Q  167 ttgcaaagagagtgggagaatgtttatgcttgaaccataattgag 211  Q
    |||||||| |||| ||| ||||||||||||||||||| |||||||    
T  8369981 ttgcaaagggagtaggaaaatgtttatgcttgaaccaaaattgag 8369937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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