View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17199_low_24 (Length: 337)
Name: NF17199_low_24
Description: NF17199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17199_low_24 |
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Alignment Details
Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 42206967 - 42207024
Alignment:
| Q |
267 |
aatttgttatgagcagtgggcatc---atggctctgtaagatattagctctgagaata |
321 |
Q |
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| T |
42206967 |
aatttgttatgagcagtgggcatcatcatggctctgtaagatattagctctgagaata |
42207024 |
T |
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