View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17199_low_5 (Length: 591)

Name: NF17199_low_5
Description: NF17199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17199_low_5
NF17199_low_5
[»] chr7 (47 HSPs)
chr7 (54-527)||(3988814-3989289)
chr7 (57-191)||(3984013-3984147)
chr7 (525-575)||(9412021-9412071)
chr7 (526-576)||(23686722-23686772)
chr7 (527-575)||(3687353-3687402)
chr7 (526-575)||(6908212-6908260)
chr7 (526-575)||(9412331-9412380)
chr7 (527-575)||(3687662-3687710)
chr7 (527-575)||(13772907-13772955)
chr7 (528-575)||(8953895-8953941)
chr7 (525-575)||(3205099-3205149)
chr7 (525-575)||(17156965-17157015)
chr7 (525-575)||(20419330-20419380)
chr7 (525-575)||(22740154-22740204)
chr7 (525-575)||(44600141-44600191)
chr7 (530-575)||(5735553-5735598)
chr7 (526-575)||(13772640-13772689)
chr7 (526-575)||(33628666-33628715)
chr7 (525-573)||(13863964-13864012)
chr7 (527-575)||(44599489-44599537)
chr7 (528-575)||(5735253-5735300)
chr7 (527-574)||(29292048-29292095)
chr7 (524-575)||(42418588-42418639)
chr7 (527-575)||(5349739-5349784)
chr7 (525-575)||(13744239-13744288)
chr7 (525-575)||(29292920-29292970)
chr7 (529-575)||(34235984-34236030)
chr7 (525-575)||(37972402-37972452)
chr7 (525-575)||(38191260-38191310)
chr7 (525-575)||(38826919-38826969)
chr7 (526-575)||(10533033-10533082)
chr7 (526-575)||(13863312-13863361)
chr7 (530-575)||(18863970-18864015)
chr7 (530-575)||(27096348-27096392)
chr7 (530-575)||(27181911-27181955)
chr7 (526-575)||(37889265-37889314)
chr7 (528-573)||(39983700-39983745)
chr7 (527-575)||(9035299-9035347)
chr7 (527-575)||(18925062-18925110)
chr7 (528-575)||(18925328-18925373)
chr7 (527-575)||(23686421-23686468)
chr7 (527-575)||(27096047-27096094)
chr7 (527-575)||(27182209-27182256)
chr7 (527-567)||(35079960-35079999)
chr7 (527-575)||(37888833-37888881)
chr7 (527-575)||(38191571-38191619)
chr7 (527-575)||(48359320-48359367)
[»] chr3 (27 HSPs)
chr3 (71-215)||(3863993-3864132)
chr3 (527-575)||(10293915-10293963)
chr3 (525-575)||(17441069-17441119)
chr3 (525-575)||(20968716-20968766)
chr3 (525-575)||(47871128-47871177)
chr3 (527-575)||(20969025-20969073)
chr3 (527-575)||(45060596-45060644)
chr3 (526-574)||(45060878-45060926)
chr3 (525-575)||(53687886-53687936)
chr3 (526-575)||(18874881-18874930)
chr3 (526-575)||(36180996-36181045)
chr3 (526-575)||(40848967-40849016)
chr3 (526-575)||(42455789-42455838)
chr3 (527-575)||(3644789-3644837)
chr3 (531-575)||(4947263-4947307)
chr3 (527-575)||(8314013-8314061)
chr3 (527-575)||(18875197-18875245)
chr3 (527-575)||(42627552-42627599)
chr3 (526-575)||(8315088-8315136)
chr3 (530-575)||(27238906-27238951)
chr3 (526-575)||(48159896-48159945)
chr3 (526-574)||(1101188-1101236)
chr3 (527-575)||(1927772-1927820)
chr3 (527-575)||(3353128-3353175)
chr3 (527-575)||(10293608-10293656)
chr3 (527-575)||(17372298-17372346)
chr3 (527-575)||(42673302-42673349)
[»] chr6 (21 HSPs)
chr6 (525-575)||(18241852-18241902)
chr6 (526-575)||(21032286-21032335)
chr6 (526-575)||(3403995-3404044)
chr6 (527-575)||(3403717-3403765)
chr6 (525-575)||(31598734-31598783)
chr6 (526-575)||(10039675-10039723)
chr6 (524-575)||(7654554-7654605)
chr6 (532-575)||(12714436-12714479)
chr6 (525-575)||(21031977-21032026)
chr6 (526-575)||(33829642-33829691)
chr6 (527-575)||(11656788-11656836)
chr6 (527-575)||(30388062-30388109)
chr6 (527-575)||(33828990-33829038)
chr6 (525-575)||(2354816-2354866)
chr6 (525-574)||(2762782-2762829)
chr6 (525-575)||(31598279-31598328)
chr6 (525-575)||(33655121-33655170)
chr6 (530-575)||(3825530-3825574)
chr6 (526-575)||(13579657-13579705)
chr6 (530-575)||(30388368-30388413)
chr6 (527-575)||(33971994-33972041)
[»] chr5 (31 HSPs)
chr5 (525-575)||(18433322-18433372)
chr5 (526-575)||(25116067-25116116)
chr5 (526-575)||(25175157-25175206)
chr5 (527-575)||(18433015-18433063)
chr5 (525-575)||(26020448-26020498)
chr5 (526-575)||(16466748-16466797)
chr5 (525-575)||(19514969-19515019)
chr5 (526-575)||(5187836-5187885)
chr5 (526-575)||(22428933-22428981)
chr5 (526-575)||(22429202-22429250)
chr5 (530-575)||(23011388-23011432)
chr5 (526-575)||(25115756-25115805)
chr5 (526-575)||(25174848-25174897)
chr5 (530-575)||(31569910-31569954)
chr5 (530-575)||(41382896-41382940)
chr5 (527-575)||(18817617-18817665)
chr5 (527-575)||(23011079-23011126)
chr5 (527-573)||(12441320-12441364)
chr5 (525-575)||(34147516-34147566)
chr5 (525-575)||(41383173-41383222)
chr5 (526-575)||(12498566-12498615)
chr5 (526-575)||(12498934-12498983)
chr5 (526-575)||(18816951-18817000)
chr5 (526-575)||(26570728-26570777)
chr5 (526-575)||(26571170-26571219)
chr5 (526-575)||(33324844-33324893)
chr5 (526-575)||(43464198-43464246)
chr5 (527-575)||(22729008-22729055)
chr5 (530-574)||(34576870-34576913)
chr5 (527-575)||(34577170-34577217)
chr5 (527-575)||(37780748-37780796)
[»] chr4 (35 HSPs)
chr4 (525-575)||(13198912-13198962)
chr4 (526-575)||(16555514-16555563)
chr4 (521-575)||(9023686-9023740)
chr4 (525-575)||(24775789-24775839)
chr4 (526-575)||(3930486-3930534)
chr4 (526-575)||(22681885-22681934)
chr4 (526-575)||(56505692-56505741)
chr4 (527-575)||(11241389-11241437)
chr4 (527-575)||(16555823-16555871)
chr4 (525-575)||(18077208-18077258)
chr4 (513-575)||(36095803-36095865)
chr4 (525-575)||(39415530-39415580)
chr4 (526-575)||(5205987-5206036)
chr4 (526-575)||(39744471-39744520)
chr4 (530-575)||(47219207-47219252)
chr4 (526-575)||(50678778-50678827)
chr4 (527-575)||(5206236-5206283)
chr4 (526-574)||(45830203-45830251)
chr4 (528-575)||(22681576-22681622)
chr4 (524-575)||(28196779-28196830)
chr4 (525-575)||(293223-293273)
chr4 (525-575)||(35393782-35393831)
chr4 (526-575)||(9380747-9380796)
chr4 (530-575)||(13198606-13198651)
chr4 (526-575)||(28196345-28196394)
chr4 (530-575)||(36096481-36096526)
chr4 (525-574)||(39912052-39912101)
chr4 (527-575)||(169445-169493)
chr4 (527-575)||(3930179-3930226)
chr4 (528-575)||(7603146-7603191)
chr4 (527-575)||(9380307-9380355)
chr4 (527-575)||(23540258-23540306)
chr4 (527-575)||(32703656-32703704)
chr4 (531-575)||(49178822-49178866)
chr4 (527-575)||(50679430-50679478)
[»] chr8 (38 HSPs)
chr8 (526-575)||(15155882-15155931)
chr8 (527-575)||(37752422-37752470)
chr8 (521-575)||(43246182-43246236)
chr8 (527-575)||(12281432-12281480)
chr8 (527-575)||(15156191-15156239)
chr8 (521-575)||(9823367-9823421)
chr8 (525-575)||(12281122-12281172)
chr8 (526-575)||(16928941-16928990)
chr8 (527-575)||(34313765-34313811)
chr8 (527-575)||(16929248-16929296)
chr8 (527-575)||(22851390-22851438)
chr8 (527-575)||(37752084-37752132)
chr8 (527-575)||(41662409-41662457)
chr8 (527-575)||(43162234-43162281)
chr8 (527-575)||(43245871-43245919)
chr8 (525-575)||(18020094-18020142)
chr8 (527-574)||(23123338-23123385)
chr8 (529-575)||(765736-765782)
chr8 (525-575)||(41662105-41662155)
chr8 (526-567)||(767720-767760)
chr8 (526-575)||(13026634-13026683)
chr8 (526-575)||(13937395-13937444)
chr8 (527-575)||(3307338-3307386)
chr8 (527-571)||(3463955-3463999)
chr8 (527-575)||(9822748-9822796)
chr8 (527-575)||(39724054-39724102)
chr8 (529-575)||(74688-74733)
chr8 (525-575)||(6092775-6092823)
chr8 (525-575)||(13936721-13936770)
chr8 (534-575)||(7127660-7127700)
chr8 (525-574)||(9465605-9465653)
chr8 (534-575)||(9930845-9930885)
chr8 (530-575)||(13027287-13027332)
chr8 (525-574)||(17431285-17431334)
chr8 (526-575)||(34498561-34498610)
chr8 (530-575)||(37669958-37670003)
chr8 (527-575)||(37397151-37397199)
chr8 (531-575)||(43162545-43162588)
[»] chr2 (38 HSPs)
chr2 (526-575)||(20347162-20347211)
chr2 (525-575)||(11883621-11883671)
chr2 (525-575)||(24832329-24832379)
chr2 (527-575)||(6171156-6171203)
chr2 (527-575)||(11883932-11883980)
chr2 (527-575)||(30191231-30191279)
chr2 (525-575)||(6495727-6495777)
chr2 (521-575)||(18296699-18296753)
chr2 (525-575)||(20347470-20347520)
chr2 (513-575)||(30190909-30190971)
chr2 (526-575)||(29230281-29230330)
chr2 (525-575)||(6171462-6171512)
chr2 (525-575)||(8851588-8851638)
chr2 (525-575)||(40469735-40469785)
chr2 (526-575)||(2639488-2639537)
chr2 (530-575)||(15920781-15920826)
chr2 (530-575)||(18055322-18055367)
chr2 (526-575)||(26841586-26841635)
chr2 (530-575)||(29343584-29343629)
chr2 (526-575)||(41790918-41790967)
chr2 (525-574)||(43495307-43495356)
chr2 (527-575)||(26737787-26737835)
chr2 (528-575)||(6495468-6495514)
chr2 (529-575)||(15321394-15321438)
chr2 (525-575)||(26737480-26737528)
chr2 (525-575)||(2638818-2638868)
chr2 (525-575)||(26692394-26692444)
chr2 (525-575)||(37720202-37720252)
chr2 (526-575)||(5378660-5378709)
chr2 (526-575)||(7664247-7664296)
chr2 (526-575)||(17346041-17346089)
chr2 (530-575)||(26692826-26692871)
chr2 (527-575)||(7664679-7664727)
chr2 (527-575)||(17850978-17851026)
chr2 (527-575)||(26842244-26842292)
chr2 (527-575)||(32672842-32672890)
chr2 (527-575)||(40221313-40221360)
chr2 (527-575)||(40469427-40469475)
[»] scaffold0319 (2 HSPs)
scaffold0319 (525-575)||(6392-6442)
scaffold0319 (527-575)||(6703-6750)
[»] scaffold0192 (1 HSPs)
scaffold0192 (525-575)||(25375-25425)
[»] scaffold0110 (2 HSPs)
scaffold0110 (525-575)||(45535-45584)
scaffold0110 (526-575)||(45813-45861)
[»] chr1 (32 HSPs)
chr1 (526-575)||(47955614-47955663)
chr1 (525-575)||(8108999-8109049)
chr1 (525-575)||(13589665-13589714)
chr1 (525-575)||(22149705-22149755)
chr1 (525-575)||(39692006-39692056)
chr1 (525-575)||(47955304-47955354)
chr1 (530-575)||(8108724-8108769)
chr1 (526-575)||(17518302-17518350)
chr1 (526-575)||(31848198-31848247)
chr1 (526-575)||(41083217-41083265)
chr1 (71-138)||(479444-479511)
chr1 (525-575)||(49284407-49284457)
chr1 (525-575)||(50615238-50615288)
chr1 (525-575)||(50623066-50623116)
chr1 (527-575)||(6002237-6002285)
chr1 (527-575)||(48190771-48190819)
chr1 (529-575)||(17518608-17518653)
chr1 (525-575)||(20480166-20480215)
chr1 (525-575)||(22149401-22149449)
chr1 (525-575)||(50429654-50429704)
chr1 (530-575)||(1176839-1176884)
chr1 (526-575)||(26815125-26815174)
chr1 (530-575)||(28634163-28634208)
chr1 (526-575)||(32163049-32163098)
chr1 (526-575)||(44911024-44911073)
chr1 (526-575)||(48191361-48191410)
chr1 (527-575)||(1176717-1176764)
chr1 (527-575)||(9347126-9347174)
chr1 (527-575)||(26814694-26814742)
chr1 (527-575)||(41082909-41082957)
chr1 (527-575)||(50615627-50615674)
chr1 (527-575)||(50623455-50623502)
[»] scaffold0802 (2 HSPs)
scaffold0802 (527-575)||(1118-1166)
scaffold0802 (527-575)||(1426-1474)
[»] scaffold0001 (4 HSPs)
scaffold0001 (527-575)||(438930-438978)
scaffold0001 (525-573)||(183670-183718)
scaffold0001 (526-575)||(439205-439254)
scaffold0001 (530-575)||(183367-183411)
[»] scaffold0328 (2 HSPs)
scaffold0328 (527-574)||(6152-6199)
scaffold0328 (527-575)||(6801-6849)
[»] scaffold0598 (1 HSPs)
scaffold0598 (529-575)||(6609-6655)
[»] scaffold0460 (1 HSPs)
scaffold0460 (525-575)||(328-378)
[»] scaffold1221 (1 HSPs)
scaffold1221 (530-575)||(1790-1834)
[»] scaffold0376 (2 HSPs)
scaffold0376 (527-575)||(7606-7653)
scaffold0376 (524-575)||(7452-7502)
[»] scaffold0015 (1 HSPs)
scaffold0015 (527-575)||(17162-17209)
[»] scaffold0002 (1 HSPs)
scaffold0002 (527-575)||(411923-411970)
[»] scaffold0035 (1 HSPs)
scaffold0035 (528-575)||(72967-73014)
[»] scaffold0535 (1 HSPs)
scaffold0535 (525-575)||(10010-10060)
[»] scaffold0009 (1 HSPs)
scaffold0009 (525-575)||(205685-205734)
[»] scaffold0176 (1 HSPs)
scaffold0176 (526-575)||(20049-20098)


Alignment Details
Target: chr7 (Bit Score: 426; Significance: 0; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 54 - 527
Target Start/End: Original strand, 3988814 - 3989289
Alignment:
Q  54 gagcgcggcctttcttgagcatagttcactcgtactgtccgaccatgaagttcctgtgacaacataattttagatgctacaagaaacattgccaacattt 153  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3988814 gagcgtggcctttcttgagcatagttcactcgtactgtccgaccatgaagttcctgtgacaacataattttagatgctacaagaaacattgccaacattt 3988913  T
Q  154 tgaggttttgcaaagagcagcaaaatgagtcaattgaatgaaacaaacagcaacaattagttgatggtaaaattctaatacatctgccttataaaaatgt 253  Q
    | || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3988914 ttag-ttttgcaaagagcagcaacatgagtcaattgaatgaaacaaacagcaacaattagttgatggtaaaattctaatacatctgccttataaaaatgt 3989012  T
Q  254 atcgtcattctttgattgttaattatatacaggtataaatattagttggcaaaatgttttactaaatctta--ctctctctcctacaataagtgtcacat 351  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  3989013 atcgtcattctttgattgttaattatataaaggtataaatattagttggcaaaatgttttactaaatcttactctctctctcctacaataagtgtcacat 3989112  T
Q  352 tttcaaaataactacaaccctctgactaatattatgtgcattattcccaagtcatcattatattttttgcattcatgataatggtgaatatgtcaatgct 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3989113 tttcaaaataactacaaccctctgactaatattatgtgcattattcccaagtcatcattatattttttgcattcatgataatggtgaatatgccaatgct 3989212  T
Q  452 taaagatgataatttcgtaaaattaccattctttc-ttcactaatagtttttctttaatttgtgtcaaagaaacaag 527  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3989213 taacgatgataatttcgtaaaattaccattctttctttcactaatagtttttctttaatttgtgtcaaagaaacaag 3989289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 3984013 - 3984147
Alignment:
Q  57 cgcggcctttcttgagcatagttcactcgtactgtccgaccatgaagttcctgtga----caacataattttagatgctacaagaaacattgccaacatt 152  Q
    |||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||    |||||||| |||||||||||||||||||||||||||||      
T  3984013 cgcgccctttctgtagcatagttcactcgtactgtccgaccatcaagttcctgtgacaaccaacataa-tttagatgctacaagaaacattgccaaca-- 3984109  T
Q  153 ttgaggttttgcaaagagcagcaaaatgagtcaattgaa 191  Q
    | || ||||||||||||||||||||||||||||||||||    
T  3984110 tcga-gttttgcaaagagcagcaaaatgagtcaattgaa 3984147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 9412021 - 9412071
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  9412021 aaggcttaattgcacttttcccccttatcttttgttaattgtgcgattttg 9412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 23686772 - 23686722
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttga 576  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  23686772 aggcttaattgcactttttccccctatcttttgctaattgtgcgattttga 23686722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 3687353 - 3687402
Alignment:
Q  527 ggcttaattgcacttttcccctc-tatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  3687353 ggcttaattgcacttttccccccctatcttttgttaattgtgcgattttg 3687402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 6908212 - 6908260
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  6908212 aggcttaattgcacttttcccc-ctatctattgttaattgtgcgattttg 6908260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 9412380 - 9412331
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  9412380 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 9412331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 3687710 - 3687662
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 3687662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 13772955 - 13772907
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttg 13772907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 8953941 - 8953895
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  8953941 gcttaattgcacttttcccc-ctatcttttgttaattgtgcaattttg 8953895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 3205149 - 3205099
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  3205149 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 3205099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 17156965 - 17157015
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  17156965 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 17157015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 20419380 - 20419330
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  20419380 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 20419330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 22740154 - 22740204
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  22740154 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 22740204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 44600191 - 44600141
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  44600191 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 44600141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 13772640 - 13772689
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| | |||||||||| |||||||| |||||||    
T  13772640 aggcttaattgcacttttcctccctatcttttgctaattgtgtgattttg 13772689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 33628715 - 33628666
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||||||    
T  33628715 aggctaaattgcactttttccctctatcttttactaattgtgcgattttg 33628666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 13864012 - 13863964
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattt 573  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||||    
T  13864012 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 44599489 - 44599537
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 44599537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 5735253 - 5735300
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| || |||||||| | ||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttg 5735300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 574
Target Start/End: Complemental strand, 29292095 - 29292048
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    |||||||||||||||||  |||||| |||||| |||||||||||||||    
T  29292095 ggcttaattgcacttttttcctctaacttttgctaattgtgcgatttt 29292048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 42418588 - 42418639
Alignment:
Q  524 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||||||||| ||||  |||| ||||||||||||||||    
T  42418588 caaggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 5349784 - 5349739
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| |||   ||||||||||||||||||||||||||    
T  5349784 ggcttaattgcactttcccc---tatcttttgttaattgtgcgattttg 5349739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 13744288 - 13744239
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  13744288 aaggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 13744239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 29292920 - 29292970
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  29292920 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 29292970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 529 - 575
Target Start/End: Complemental strand, 34236030 - 34235984
Alignment:
Q  529 cttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttg 34235984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 37972452 - 37972402
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  37972452 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 37972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 38191260 - 38191310
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||| |||||||||||||||| || ||||||||| ||||| ||||||||||    
T  38191260 aaggtttaattgcacttttcctctttatcttttgctaattatgcgattttg 38191310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 38826969 - 38826919
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| |||||||| ||||  ||||| |||||||||||||||    
T  38826969 aaggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttg 38826919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 10533033 - 10533082
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  10533033 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 10533082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 13863312 - 13863361
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||| ||||| || ||||||||||  |||||||||||||||    
T  13863312 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttg 13863361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 18863970 - 18864015
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 18864015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 27096392 - 27096348
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||    
T  27096392 ttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttg 27096348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 27181911 - 27181955
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||    
T  27181911 ttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttg 27181955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 37889314 - 37889265
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  37889314 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 37889265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 39983700 - 39983745
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattt 573  Q
    ||||||||||||||||||||  |||||||| |||||| ||||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgattt 39983745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 9035347 - 9035299
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 9035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 18925062 - 18925110
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||  | |||||||||| ||||||||| ||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttg 18925110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 18925373 - 18925328
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||  ||||| ||||| ||||||||||||||||    
T  18925373 gcttaattgcacttttcc--tctatattttgctaattgtgcgattttg 18925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 23686421 - 23686468
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||||| | ||||||    
T  23686421 ggcttaattgcacttttcccc-ctatcttttgctaattgtacaattttg 23686468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 27096047 - 27096094
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| |||| |||| ||||| ||||||||||||||||    
T  27096047 ggcttaattgcactttccccc-ctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 27182256 - 27182209
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| |||| |||| ||||| ||||||||||||||||    
T  27182256 ggcttaattgcactttccccc-ctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 567
Target Start/End: Original strand, 35079960 - 35079999
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtg 567  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  35079960 ggcttaattgcacttttcccc-ctatcttttgctaattgtg 35079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 37888833 - 37888881
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 37888881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 38191619 - 38191571
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||  || |||||||||||||||| ||||||||||    
T  38191619 ggcttaattgcattttttacccctatcttttgttaattatgcgattttg 38191571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 48359320 - 48359367
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  48359320 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 48359367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 71 - 215
Target Start/End: Original strand, 3863993 - 3864132
Alignment:
Q  71 agcatagttcactcgtactgtccgaccatgaagttcctgtgacaacataattttagatgctacaagaaacattgccaacattttgaggttttgcaaagag 170  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3863993 agcatagttcactcgtaccttccgaccataaagatcctgtgacaacacaattttagatgctacaagaagcattgccaacattttga-gttttgcaaagag 3864091  T
Q  171 cagcaaaatgagtcaattgaatgaaacaaacagcaacaattagtt 215  Q
    |||||||||| |||    ||||||||||||| |||| ||| ||||    
T  3864092 cagcaaaatgtgtc----gaatgaaacaaacggcaaaaatgagtt 3864132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 10293963 - 10293915
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 10293915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 17441119 - 17441069
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  17441119 aaggcttaattgcatttttcctctctatcttttgttaattgtgcgattttg 17441069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 20968716 - 20968766
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  20968716 aaggcttaattgcacctttcccccctatcttttgttaattgtgcgattttg 20968766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 47871177 - 47871128
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  47871177 aaggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttg 47871128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 20969073 - 20969025
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 20969025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 574
Target Start/End: Complemental strand, 45060926 - 45060878
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||    
T  45060926 aggcttaattgcacttttcacccctatcttttgctaattgtgcgatttt 45060878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 53687886 - 53687936
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  53687886 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 53687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 18874881 - 18874930
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  18874881 aggctcaattgcactttttccccctatcttttgctaattgtgcgattttg 18874930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 36181045 - 36180996
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| | ||||  |||||||||||||||||||||    
T  36181045 aggcttaattgcacttttcctccctatagtttgttaattgtgcgattttg 36180996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 40849016 - 40848967
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||||||  ||||  |||||||||||||||    
T  40849016 aggcttaattgcacttttcccctctatagtttgccaattgtgcgattttg 40848967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 42455789 - 42455838
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  42455789 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 42455838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 3644837 - 3644789
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttg 3644789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 531 - 575
Target Start/End: Original strand, 4947263 - 4947307
Alignment:
Q  531 taattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| || |||| ||||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttg 4947307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 8314013 - 8314061
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || |||| |||||| |||||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttg 8314061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 18875245 - 18875197
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||| |||||||||| ||||||| ||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttg 18875197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 42627599 - 42627552
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  42627599 ggcttaattgcacttttccc-tctatcttttgctaattgtgtgattttg 42627552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 8315136 - 8315088
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| |||| |||| |||||| |||||||||||||||    
T  8315136 aggcttaattgcactttccccc-ctatattttgtcaattgtgcgattttg 8315088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 27238951 - 27238906
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||  ||||  |||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttg 27238906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 48159896 - 48159945
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  48159896 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 48159945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 574
Target Start/End: Complemental strand, 1101236 - 1101188
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||||||||||||  ||||||||| |  ||||||||||||    
T  1101236 aggcttaattgcacttttcccccttatcttttgctttttgtgcgatttt 1101188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 1927772 - 1927820
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||| ||||||| ||||||||||  |||| ||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttg 1927820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 3353128 - 3353175
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  3353128 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 3353175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 10293608 - 10293656
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||  || ||||||||||| |||||||||||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttg 10293656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 17372298 - 17372346
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||| ||| ||| |||| ||||| ||||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttg 17372346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 42673349 - 42673302
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  42673349 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 42673302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 18241852 - 18241902
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18241852 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 18241902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 21032335 - 21032286
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21032335 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 21032286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 3404044 - 3403995
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  3404044 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 3403995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 3403717 - 3403765
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 3403765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 31598783 - 31598734
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  31598783 aaggtttaattgcacttttcccc-ctatcttttgttaattgtgcgattttg 31598734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 10039675 - 10039723
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  10039675 aggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttg 10039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 7654605 - 7654554
Alignment:
Q  524 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  7654605 caaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 7654554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 575
Target Start/End: Original strand, 12714436 - 12714479
Alignment:
Q  532 aattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttg 12714479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 21031977 - 21032026
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  21031977 aaggcttaattgcacttttcccc-ctaacttttgctaattgtgcgattttg 21032026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 33829691 - 33829642
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  33829691 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 33829642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 11656836 - 11656788
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttg 11656788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 30388062 - 30388109
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  30388062 ggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttg 30388109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 33828990 - 33829038
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 33829038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 2354866 - 2354816
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||    
T  2354866 aaggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttg 2354816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 574
Target Start/End: Complemental strand, 2762829 - 2762782
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||||||||||   |||||||||||||||||||| ||||||    
T  2762829 aaggcttaattgcacttttct--tctatcttttgttaattgtgtgatttt 2762782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 31598328 - 31598279
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| | ||||||| ||||||||||| ||||||||||||||||    
T  31598328 aaggcttaattgtatttttccc-tctatcttttgctaattgtgcgattttg 31598279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 33655170 - 33655121
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||| ||||||    
T  33655170 aaggcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttg 33655121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 3825530 - 3825574
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||    
T  3825530 ttaattgcacttttcccc-ctatattttgctaattgtgcgattttg 3825574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 13579705 - 13579657
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || ||||| |||| ||||||||||||||||    
T  13579705 aggcttaattgcacttttctcc-ctatcgtttgctaattgtgcgattttg 13579657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 30388413 - 30388368
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||| |||||| ||| |||||||||| ||||||||||||||||    
T  30388413 ttaattgtactttttccccctatcttttgctaattgtgcgattttg 30388368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 33971994 - 33972041
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  33971994 ggcttaattgcagtttttccc-ctatcttttgttaattgtacgattttg 33972041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 18433372 - 18433322
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18433372 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 18433322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 25116116 - 25116067
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25116116 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 25116067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 25175206 - 25175157
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25175206 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 25175157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 18433015 - 18433063
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 18433063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 26020448 - 26020498
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  26020448 aaggcttaattgcacttttcctccctatcttttgctaattgtgcgattttg 26020498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 16466797 - 16466748
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  16466797 aggcttaattgcacttttcccccctatattttgctaattgtgcgattttg 16466748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 19515019 - 19514969
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  19515019 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 19514969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 5187885 - 5187836
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| |||  ||||||||||||||||||| ||||||    
T  5187885 aggcttaattgcacttttgccccttatcttttgttaattgtgcaattttg 5187836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 22428933 - 22428981
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  22428933 aggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttg 22428981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 22429250 - 22429202
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  22429250 aggcttaattgcatttttcccc-ctatcttttgctaattgtgcgattttg 22429202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 23011432 - 23011388
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  23011432 ttaattgcactttttccct-tatcttttgttaattgtgcgattttg 23011388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 25115756 - 25115805
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||||||||  ||||||| |||||||    
T  25115756 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttg 25115805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 25174848 - 25174897
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||||||||  ||||||| |||||||    
T  25174848 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttg 25174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 31569910 - 31569954
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  31569910 ttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttg 31569954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 41382896 - 41382940
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||    
T  41382896 ttaattgca-ttttcccccctatcttttgttaattgtgcgattttg 41382940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 18817665 - 18817617
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 18817617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 23011079 - 23011126
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  23011079 ggcttaattgcatttttcccct-tatcttttgctaattgtgcgattttg 23011126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 573
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattt 573  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||    
T  12441364 ggcttaattgcacttttccc--ctatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 34147566 - 34147516
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| ||| ||||  ||||| |||||||||||||||    
T  34147566 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttg 34147516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 41383222 - 41383173
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| |||||||||| |||| ||||| ||||||||||||||||    
T  41383222 aaggcttaattgaacttttcccc-ctattttttgctaattgtgcgattttg 41383173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 12498566 - 12498615
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  12498566 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 12498615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 12498983 - 12498934
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  12498983 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 12498934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 18816951 - 18817000
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||| ||||| || ||||||||||  |||||||||||||||    
T  18816951 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttg 18817000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 26570728 - 26570777
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||| ||||||||||| ||||  ||||| |||||||||||||||    
T  26570728 aggcttaattacacttttcccccctatagtttgtcaattgtgcgattttg 26570777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 26571219 - 26571170
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  26571219 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 26571170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 33324893 - 33324844
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||  || ||||||||||| ||||||| |||||||    
T  33324893 aggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttg 33324844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 43464246 - 43464198
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  43464246 aggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 43464198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 22729008 - 22729055
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  22729008 ggcttaattgcacttttcccc-ctatagtttgtaaattgtgcgattttg 22729055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 530 - 574
Target Start/End: Original strand, 34576870 - 34576913
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||    
T  34576870 ttaattgcactttccccc-ctatcttttgctaattgtgcgatttt 34576913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 34577217 - 34577170
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||| |||||||||| |||||||| |||||||    
T  34577217 ggcttaattgcactttttccc-ctatcttttgctaattgtgtgattttg 34577170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 37780796 - 37780748
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||| |||||||||| ||||  |||| ||||||||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttg 37780748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 13198962 - 13198912
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13198962 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 13198912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 16555514 - 16555563
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  16555514 aggcttaattgcacttttcccccttatcttttgttaattgtgcgattttg 16555563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 9023740 - 9023686
Alignment:
Q  521 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  9023740 aaacaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 9023686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 24775839 - 24775789
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  24775839 aaggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttg 24775789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 3930534 - 3930486
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  3930534 aggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttg 3930486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 22681934 - 22681885
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  22681934 aggcttaattgcacttttccctcctatcttttgttaattgtgcaattttg 22681885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 56505692 - 56505741
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  56505692 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 56505741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 11241389 - 11241437
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttg 11241437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 16555871 - 16555823
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttg 16555823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 18077258 - 18077208
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| || |||| ||||| ||||||||||||||||    
T  18077258 aaggcttaattgcacttttcacccctattttttgctaattgtgcgattttg 18077208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 36095803 - 36095865
Alignment:
Q  513 tgtcaaagaaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||| ||| |||||||||||||| ||||| || ||||||||||  |||||||||||||||    
T  36095803 tgtcaaaaaaaaaaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttg 36095865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 39415580 - 39415530
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  39415580 aaggcttaactgcactttttccctctatcttttgctaattgtgcaattttg 39415530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 5205987 - 5206036
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| | ||||||||||||||||  |||||||||    
T  5205987 aggcttaattgcacttttcctccctatcttttgttaatttggcgattttg 5206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 39744520 - 39744471
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  39744520 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 39744471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 47219252 - 47219207
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttg 47219207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 50678778 - 50678827
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  50678778 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 50678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 5206283 - 5206236
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||    
T  5206283 ggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttg 5206236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 526 - 574
Target Start/End: Complemental strand, 45830251 - 45830203
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||| ||||||||| || ||||||||||| ||||||||||||||    
T  45830251 aggcttaatcgcacttttcacccctatcttttgtcaattgtgcgatttt 45830203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 22681576 - 22681622
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  22681576 gcttaattgcactttccccc-ctatcttttgtcaattgtgcgattttg 22681622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 28196830 - 28196779
Alignment:
Q  524 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  28196830 caaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 28196779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 293273 - 293223
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| ||| ||||  ||||| |||||||||||||||    
T  293273 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttg 293223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 35393831 - 35393782
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  35393831 aaggcttaattgcacttttcacc-ctatcttttgctaattgtgcgaatttg 35393782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 9380796 - 9380747
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  9380796 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 9380747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 13198606 - 13198651
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||| ||| |||||||||  |||||||||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttg 13198651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 28196345 - 28196394
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  28196345 aggcttaattgcacttttcccccctataatttgccaattgtgcgattttg 28196394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 36096526 - 36096481
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttg 36096481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 39912052 - 39912101
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||||||||||| | ||||  ||| ||||||||||||||||    
T  39912052 aaggcttaattgcacttttcctccctatagtttattaattgtgcgatttt 39912101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 169493 - 169445
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| |||||||| ||||  ||||| |||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttg 169445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 3930179 - 3930226
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||| ||||||||| |||||| ||||||||||    
T  3930179 ggcttaattgcactttttccc-ctatcttttattaattatgcgattttg 3930226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 7603146 - 7603191
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||||    
T  7603146 gcttaattgcacttttccc--ctatctttttttaattgtgcaattttg 7603191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 9380307 - 9380355
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 9380355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 23540306 - 23540258
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||  ||||| |||||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttg 23540258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 32703704 - 32703656
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 32703656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 575
Target Start/End: Complemental strand, 49178866 - 49178822
Alignment:
Q  531 taattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| || ||||||||||  |||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttg 49178822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 50679478 - 50679430
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||  |||||| ||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttg 50679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 15155882 - 15155931
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15155882 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 15155931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 37752470 - 37752422
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttg 37752422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 43246236 - 43246182
Alignment:
Q  521 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  43246236 aaacaaggcttaattgcacttttcccccctatcttttgctaattgtgtgattttg 43246182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 12281480 - 12281432
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  12281480 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttg 12281432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 15156239 - 15156191
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttg 15156191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 9823421 - 9823367
Alignment:
Q  521 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  9823421 aaacaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 9823367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 12281122 - 12281172
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  12281122 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 12281172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 16928941 - 16928990
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  16928941 aggcttaattgcactttccccccctatcttttgctaattgtgcgattttg 16928990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 34313765 - 34313811
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  34313765 ggcttaattgcacttttcccct--atcttttgttaattgtgcgattttg 34313811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 16929296 - 16929248
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttg 16929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 22851390 - 22851438
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttg 22851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 37752084 - 37752132
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttg 37752132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 41662457 - 41662409
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 41662409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 43162234 - 43162281
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  43162234 ggcttaattgcacttttcccc-ctatattttgttaattgtgcgattttg 43162281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 43245871 - 43245919
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttg 43245919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 18020142 - 18020094
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  18020142 aaggcttaattgcacttttaccct--atcttttgttaattgtgcgattttg 18020094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 574
Target Start/End: Original strand, 23123338 - 23123385
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgatttt 23123385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 765736 - 765782
Alignment:
Q  529 cttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttg 765782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 41662105 - 41662155
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  41662105 aaggcttaattgcacattttccccatatcttttgttaattgtgcgattttg 41662155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 767760 - 767720
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtg 567  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  767760 aggcttaattgcacttttcccc-ctatcttttgttaattgtg 767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 13026634 - 13026683
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  13026634 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 13026683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 13937444 - 13937395
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||| |||||| |||||||||| ||||    
T  13937444 aggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttg 13937395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 3307338 - 3307386
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttg 3307386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 571
Target Start/End: Complemental strand, 3463999 - 3463955
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgat 571  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgat 3463955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 9822748 - 9822796
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||| | |||||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttg 9822796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 39724102 - 39724054
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 39724054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 74688 - 74733
Alignment:
Q  529 cttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||    
T  74688 cttaattgcacttttccc-tccatcttttgctaattgtgcgattttg 74733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 6092775 - 6092823
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  6092775 aaggcttaattgca-ttttcccc-ctatcttttgtcaattgtgcgattttg 6092823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 13936721 - 13936770
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||   |||||||||||||||    
T  13936721 aaggcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttg 13936770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 534 - 575
Target Start/End: Original strand, 7127660 - 7127700
Alignment:
Q  534 ttgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  7127660 ttgcacttttcccc-ctatcttttgctaattgtgcgattttg 7127700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 9465605 - 9465653
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||||||||||| | ||||||||||| |||||||| |||||    
T  9465605 aaggcttaattgcacttttcctc-ctatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 534 - 575
Target Start/End: Complemental strand, 9930885 - 9930845
Alignment:
Q  534 ttgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  9930885 ttgcactttccccct-tatcttttgttaattgtgcgattttg 9930845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 13027332 - 13027287
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttg 13027287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 17431285 - 17431334
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    |||||||||||||||||||||||  |||  ||||| ||||||||||||||    
T  17431285 aaggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttt 17431334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 34498610 - 34498561
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  34498610 aggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttg 34498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 37669958 - 37670003
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| |  ||||||||||||||||||| ||||||    
T  37669958 ttaattgcacttttcctccttatcttttgttaattgtgcaattttg 37670003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 37397199 - 37397151
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 37397151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 575
Target Start/End: Complemental strand, 43162588 - 43162545
Alignment:
Q  531 taattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||    
T  43162588 taattgcacttttcccc-ctatcttttgtcaatcgtgcgattttg 43162545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 20347162 - 20347211
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20347162 aggcttaattacacttttcccctctatcttttgttaattgtgcgattttg 20347211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 11883621 - 11883671
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  11883621 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 11883671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 24832329 - 24832379
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  24832329 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 24832379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 6171156 - 6171203
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6171156 ggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttg 6171203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 11883980 - 11883932
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 11883932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 30191279 - 30191231
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  30191279 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttg 30191231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 6495777 - 6495727
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  6495777 aaggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttg 6495727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 18296753 - 18296699
Alignment:
Q  521 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  18296753 aaacaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 18296699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 20347520 - 20347470
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  20347520 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 20347470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 30190909 - 30190971
Alignment:
Q  513 tgtcaaagaaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||| |||  |||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  30190909 tgtcaaaaaaaataggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 30190971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 29230281 - 29230330
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  29230281 aggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttg 29230330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 6171512 - 6171462
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||||||||  ||||||| |||||||    
T  6171512 aaggcttaattgcacttttcccccctatcttttgccaattgtgggattttg 6171462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 8851638 - 8851588
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  8851638 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 8851588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 40469785 - 40469735
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  40469785 aaggtttaattgcactttttccccctatcttttgctaattgtgcgattttg 40469735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 2639537 - 2639488
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  2639537 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 2639488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 15920781 - 15920826
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttg 15920826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 18055367 - 18055322
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttg 18055322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 26841586 - 26841635
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  26841586 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 26841635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 29343584 - 29343629
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttg 29343629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 41790967 - 41790918
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||||||    
T  41790967 aggcttaattgcacttttcccccctatattttgccaattgtgcgattttg 41790918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 43495307 - 43495356
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    ||||||||||||||||||||||  |||| ||||| |||||||||||||||    
T  43495307 aaggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 26737835 - 26737787
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || |||||||||| ||| ||||||||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttg 26737787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 6495468 - 6495514
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatc-tttgttaattgtgcgattttg 6495514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 15321394 - 15321438
Alignment:
Q  529 cttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||    
T  15321394 cttaattgcacttttcccct--atcttttgttaattgtgcaattttg 15321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 26737480 - 26737528
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| |||  |||||||| ||||||||||||||||    
T  26737480 aaggcttaattgcacttttctcct--atcttttgctaattgtgcgattttg 26737528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 2638818 - 2638868
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| ||||| || ||||||||||  |||||||||||||||    
T  2638818 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttg 2638868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 26692394 - 26692444
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||| |||||||||||||| ||||||||  ||||| |||||||||||||||    
T  26692394 aaggtttaattgcactttttccctctatagtttgtcaattgtgcgattttg 26692444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 37720202 - 37720252
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  37720202 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 37720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 5378660 - 5378709
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  5378660 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 5378709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 7664247 - 7664296
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||| | |||||||||||||||    
T  7664247 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttg 7664296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 17346089 - 17346041
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || | ||||||||| ||||||||||||||||    
T  17346089 aggcttaattgcactttttcctt-tatcttttgctaattgtgcgattttg 17346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 26692871 - 26692826
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||||  ||||  |||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttg 26692826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 7664727 - 7664679
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| | ||||  ||||| |||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttg 7664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 17850978 - 17851026
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 17851026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 26842292 - 26842244
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||| |||||||||| || ||||||||||  |||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttg 26842244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 32672842 - 32672890
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||   |  ||||||||||||||||||||||||||    
T  32672842 ggcttaattgcacttttgttccttatcttttgttaattgtgcgattttg 32672890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 40221313 - 40221360
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||| ||||||| |||||||||| ||||||| ||||||||    
T  40221313 ggcttaattgcacctttcccc-ctatcttttgctaattgttcgattttg 40221360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 40469427 - 40469475
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||| | |||||||  |||||||||| ||||||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttg 40469475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 6392 - 6442
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  6392 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 6442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 6750 - 6703
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  6750 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttg 6703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 25425 - 25375
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  25425 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 25375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 45535 - 45584
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45535 aaggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttg 45584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 45861 - 45813
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  45861 aggcttaattgcacttttcccc-ctatcttttgccaattgtgcgattttg 45813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 47955663 - 47955614
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  47955663 aggcttaattgcacttttcccccctatcttttattaattgtgcgattttg 47955614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 8109049 - 8108999
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  8109049 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 8108999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 13589714 - 13589665
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  13589714 aaggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttg 13589665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 22149755 - 22149705
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  22149755 aaggtttaattgcacttttcccccctatcttttgctaattgtgcgattttg 22149705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 39692056 - 39692006
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  39692056 aaggcttaattgcacttttcccccctatattttgtcaattgtgcgattttg 39692006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 47955304 - 47955354
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  47955304 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 47955354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 8108724 - 8108769
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttg 8108769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 17518302 - 17518350
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  17518302 aggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttg 17518350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 31848247 - 31848198
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||||||    
T  31848247 aggcttaattgcacttttctcccctatcttttgttaattgtacgattttg 31848198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 41083265 - 41083217
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  41083265 aggcttaattgcacttttcccc-ctatcttttgttagttgtgcgattttg 41083217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 479511 - 479444
Alignment:
Q  71 agcatagttcactcgtactgtccgaccatgaagttcctgtgacaacataattttagatgctacaagaa 138  Q
    ||||||||||||||||||  ||||||||| | | ||||| ||||||| ||||||| ||||||||||||    
T  479511 agcatagttcactcgtaccctccgaccattaggatcctgcgacaacacaattttaaatgctacaagaa 479444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 49284407 - 49284457
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  49284407 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 49284457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 50615238 - 50615288
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  50615238 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 50615288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 50623066 - 50623116
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  50623066 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 50623116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 6002237 - 6002285
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||| ||||||| |||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttg 6002285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 48190771 - 48190819
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttg 48190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 529 - 575
Target Start/End: Complemental strand, 17518653 - 17518608
Alignment:
Q  529 cttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||    
T  17518653 cttaattgcacttttcccc-ctatcttttgccaattgtgcgattttg 17518608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 20480166 - 20480215
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  20480166 aaggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 20480215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 22149401 - 22149449
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  22149401 aaggcttaattgcacttttcccc-ctatc-tttggtaattgtgcgattttg 22149449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 50429654 - 50429704
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||||||||| |||  |||| ||||||||||||||||    
T  50429654 aaggcttaattgtacttttcccctttataatttgctaattgtgcgattttg 50429704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 1176839 - 1176884
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| ||| ||||||||||| |||||||| ||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttg 1176884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 26815174 - 26815125
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||| | |||||||||||||||    
T  26815174 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttg 26815125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 28634208 - 28634163
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 28634163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 32163098 - 32163049
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  32163098 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 32163049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 44911024 - 44911073
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| |||| |||| |||||  |||||||||||||||    
T  44911024 aggcttaattgcactttccccccctatattttgccaattgtgcgattttg 44911073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 48191410 - 48191361
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| || ||||||||||  ||| |||||||||||    
T  48191410 aggcttaattgcacttttcacccctatcttttgccaatggtgcgattttg 48191361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 1176717 - 1176764
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| |||| |||| ||||| ||||||||||||||||    
T  1176717 ggcttaattgcactttccccc-ctatattttgctaattgtgcgattttg 1176764  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 9347126 - 9347174
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttg 9347174  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 26814694 - 26814742
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| | ||||  ||||| |||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttg 26814742  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 41082909 - 41082957
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||| |||||| ||| ||||||||||  |||||||||||||||    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttg 41082957  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 50615674 - 50615627
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  50615674 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 50615627  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 50623502 - 50623455
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  50623502 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttg 50623455  T

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Target: scaffold0802 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 1118 - 1166
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttg 1166  T

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Target: scaffold0802; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 1474 - 1426
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||| ||||||||||  |||||||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttg 1426  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 438930 - 438978
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttg 438978  T

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Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 183718 - 183670
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattt 573  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  183718 aaggcttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

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Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 439254 - 439205
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| |||  ||||||||| ||||||||||||||||    
T  439254 aggcttaattgcactttttccccttatcttttgctaattgtgcgattttg 439205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 183367 - 183411
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||    
T  183367 ttaattgcacttttcccc-ctatcttttgtcaattgtacgattttg 183411  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 574
Target Start/End: Original strand, 6152 - 6199
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 574  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgatttt 6199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 6849 - 6801
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| ||||| || ||||||||||  |||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttg 6801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 6609 - 6655
Alignment:
Q  529 cttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttg 6655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 328 - 378
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  328 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttg 378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 575
Target Start/End: Complemental strand, 1834 - 1790
Alignment:
Q  530 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  1834 ttaattgcacttttcccc-ctatcttttgtttattgtgcgattttg 1790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 7653 - 7606
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7653 ggcttaattgcactttttccc-ctatcttttgctaattgtgcgattttg 7606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 7452 - 7502
Alignment:
Q  524 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  7452 caaggcttaattgcactttttccc-ctatcttttgctaattatgcgattttg 7502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 17209 - 17162
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  17209 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcaattttg 17162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 411923 - 411970
Alignment:
Q  527 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  411923 ggcttaattgcactttacccc-ctatcttttgtcaattgtgcgattttg 411970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 72967 - 73014
Alignment:
Q  528 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||| ||||||||| ||||||||| ||||||||| ||||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttg 73014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 10010 - 10060
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||| ||| ||||||||||  |||||| ||||||||    
T  10010 aaggcttaattgcacttttgccccctatcttttgccaattgtacgattttg 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 205685 - 205734
Alignment:
Q  525 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    |||||||||||||| ||||| || |||||||||| ||||||||||||||||    
T  205685 aaggcttaattgcatttttctcc-ctatcttttgctaattgtgcgattttg 205734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 20098 - 20049
Alignment:
Q  526 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 575  Q
    ||||||||||||||||||||||  |||  ||||| |||||||||||||||    
T  20098 aggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttg 20049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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